View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13869_high_31 (Length: 301)
Name: NF13869_high_31
Description: NF13869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13869_high_31 |
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Alignment Details
Target: chr7 (Bit Score: 153; Significance: 4e-81; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 10 - 226
Target Start/End: Original strand, 36126850 - 36127049
Alignment:
| Q |
10 |
agcagcacagacacacacacaattactaacaacgattaaataactaaaccttcgcaaaactaaaaccttcaccagtcataccatacctgcatttttgcat |
109 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
36126850 |
agcaacacagacacacacacaattactaacaacgattaaataactaaac-----------------cttcaccagtcataccatacctgcatttttgcat |
36126932 |
T |
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| Q |
110 |
ctcaaaaaacaaaccacgtgcctgatccgttctattatgcctagcatgcaacctaatcatcatgttgtacatatctgttctggcacaataatttttctga |
209 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
36126933 |
ctcaaaaaacaaaccacgtgcctgatccgttctattatgcctagcatgcaacctaatcatcatgttgtatatatctgttctggcacaataatttttctga |
36127032 |
T |
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