View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13869_high_47 (Length: 205)
Name: NF13869_high_47
Description: NF13869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13869_high_47 |
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Alignment Details
Target: chr2 (Bit Score: 159; Significance: 7e-85; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 15 - 189
Target Start/End: Complemental strand, 38359027 - 38358853
Alignment:
| Q |
15 |
ttattcttgattttatcagcaataggttgacatatttgggcttgcctttgaaaattggaactctaagataagtaaatagaagaaagccaatgttaaaacc |
114 |
Q |
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| T |
38359027 |
ttattcttgattttatcagcaataggttgacatatttgggcttgcctttgaaaattggaactccaagataagtaaatggaagaaagccaatgttaaaacc |
38358928 |
T |
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| Q |
115 |
aagatcattagccaattgagtcaatctatgattagtgatagaacatgcaaatatataagattttttaggtttaac |
189 |
Q |
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| T |
38358927 |
aagatcattagccaattgaatcaatctatgattactgatagaacatgcaaatatataagattttttaggtttaac |
38358853 |
T |
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