View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13869_low_27 (Length: 348)
Name: NF13869_low_27
Description: NF13869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13869_low_27 |
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Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 18 - 235
Target Start/End: Complemental strand, 419599 - 419382
Alignment:
| Q |
18 |
acataatgatttttattttattttcaaggatcccctccggagtctggaactcaatctacatcttctgtgactgtggccgtatctccaccggattattttc |
117 |
Q |
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| T |
419599 |
acataatgatttttattttattttcaaggatcccctccggagtctggaactcaatccacatcttctgtgactgtggccgtatctccaccggattattttc |
419500 |
T |
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| Q |
118 |
gacaaaggtcgtaccaaaccccaagcccttcaacaacttcaagctcaatgtttttctccaccgggtagtgaacgtactcaagcaatgtgtagctattaac |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
419499 |
gacaaaggtcgtaccaaaccccaagcccttcaacaacttcaagctcaatgtttttctccaccgggtagtgaacgtactcgagcaatgtgtagctattaac |
419400 |
T |
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| Q |
218 |
tagtagcatgcattccag |
235 |
Q |
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|||||||||||||||||| |
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| T |
419399 |
tagtagcatgcattccag |
419382 |
T |
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