View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1386_high_14 (Length: 461)
Name: NF1386_high_14
Description: NF1386
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1386_high_14 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 351; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 87 - 453
Target Start/End: Original strand, 19577232 - 19577598
Alignment:
| Q |
87 |
cataaggacctaagttaagtattttgcgaagatctttatgagagccccagttgattaaaacaatggaggtgtggttaatgttttggggggtgggtttagc |
186 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19577232 |
cataaggacctaagttaagtattttgcgaagatctttatgagagccccagttgattaaaacaatggaggtgtggttaatgttttggggggtgggtttagc |
19577331 |
T |
|
| Q |
187 |
ataattatgaatttcgcggaaggatgaaacggggtaagatgcgtattgaattgaatcggattcgagaatacggaaaagggttttgagtgcgcagagggaa |
286 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19577332 |
ataattatgaatttcgcggaaggatgaaacggggtaagatgcgtattgaattgaatcggattcgagaatacggaaaagggttttgagtgcgcagagggaa |
19577431 |
T |
|
| Q |
287 |
tcgacgtcggaggttgaggggaaaatgaggacgggggatgtggtggaagaaagttgggcggattgacggagtttggtgtagaatgaatcgactctgtgtt |
386 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
19577432 |
tcgacgtcggaggttgaggggaaaatgaggacgggggatgtggtggaagaaagttgggcggactgacggagttttgtgtaaaatgaatcgactctgtgtt |
19577531 |
T |
|
| Q |
387 |
cacgaaccatagtgtgataattgagtgaagaaaaaaggggttgagaattgaatgaatgaaattattt |
453 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
19577532 |
cacgaaccatagtgtgataattgagtgaagaaagaaggggttgagaattgaatgaatgaaattattt |
19577598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University