View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13871_low_4 (Length: 228)

Name: NF13871_low_4
Description: NF13871
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13871_low_4
NF13871_low_4
[»] scaffold0005 (1 HSPs)
scaffold0005 (1-228)||(226338-226566)
[»] chr4 (50 HSPs)
chr4 (1-228)||(14590812-14591040)
chr4 (120-228)||(6430679-6430785)
chr4 (120-228)||(48598878-48598983)
chr4 (167-228)||(16911537-16911598)
chr4 (167-227)||(487234-487294)
chr4 (120-228)||(5648234-5648340)
chr4 (120-228)||(47528583-47528688)
chr4 (167-228)||(5306762-5306823)
chr4 (167-228)||(14983809-14983870)
chr4 (167-228)||(16408702-16408763)
chr4 (184-228)||(11054262-11054306)
chr4 (184-228)||(23501768-23501812)
chr4 (167-227)||(42164247-42164307)
chr4 (167-227)||(54730225-54730285)
chr4 (120-228)||(20224959-20225064)
chr4 (167-228)||(21646939-21647000)
chr4 (167-228)||(40915804-40915865)
chr4 (187-227)||(17315417-17315457)
chr4 (167-227)||(35567146-35567206)
chr4 (120-220)||(41018847-41018945)
chr4 (184-228)||(44363248-44363292)
chr4 (167-227)||(54640438-54640498)
chr4 (167-222)||(39077893-39077948)
chr4 (184-227)||(43035224-43035267)
chr4 (184-223)||(54175043-54175082)
chr4 (120-223)||(17043447-17043549)
chr4 (167-225)||(23580307-23580365)
chr4 (182-224)||(49938552-49938594)
chr4 (187-228)||(5313113-5313154)
chr4 (167-224)||(30496419-30496476)
chr4 (167-228)||(30639355-30639416)
chr4 (167-224)||(49938689-49938746)
chr4 (120-156)||(9987887-9987923)
chr4 (167-227)||(12257692-12257752)
chr4 (184-228)||(19027823-19027867)
chr4 (195-227)||(54966997-54967029)
chr4 (183-226)||(3580951-3580994)
chr4 (120-155)||(8473675-8473710)
chr4 (193-228)||(20405068-20405103)
chr4 (167-218)||(32629367-32629418)
chr4 (184-227)||(47441646-47441689)
chr4 (186-220)||(7385594-7385628)
chr4 (198-228)||(10660379-10660409)
chr4 (198-228)||(10874524-10874554)
chr4 (167-217)||(25463108-25463158)
chr4 (167-225)||(30690282-30690340)
chr4 (167-228)||(30352690-30352751)
chr4 (167-228)||(37494826-37494887)
chr4 (196-228)||(13256525-13256557)
chr4 (167-227)||(39029160-39029220)
[»] chr2 (41 HSPs)
chr2 (120-228)||(17896234-17896342)
chr2 (120-228)||(12023972-12024078)
chr2 (167-228)||(14530293-14530354)
chr2 (167-228)||(25079817-25079878)
chr2 (167-226)||(99362-99421)
chr2 (120-228)||(8455369-8455476)
chr2 (120-228)||(23397741-23397846)
chr2 (118-228)||(25249789-25249897)
chr2 (167-228)||(7214509-7214570)
chr2 (167-228)||(24200724-24200785)
chr2 (171-225)||(5841006-5841060)
chr2 (167-225)||(10543676-10543734)
chr2 (167-228)||(11514411-11514472)
chr2 (167-228)||(21779358-21779419)
chr2 (167-228)||(40416970-40417031)
chr2 (167-227)||(4516450-4516510)
chr2 (167-223)||(17380335-17380391)
chr2 (184-228)||(17667977-17668021)
chr2 (167-227)||(21377172-21377232)
chr2 (166-225)||(31158539-31158598)
chr2 (187-225)||(5450263-5450301)
chr2 (170-228)||(22371032-22371090)
chr2 (167-228)||(17623539-17623600)
chr2 (167-228)||(17705470-17705531)
chr2 (167-228)||(27573596-27573657)
chr2 (168-228)||(19977814-19977874)
chr2 (120-227)||(9671156-9671261)
chr2 (184-227)||(33795261-33795304)
chr2 (193-228)||(39914431-39914466)
chr2 (198-228)||(14544038-14544068)
chr2 (184-218)||(25641487-25641521)
chr2 (167-225)||(44604832-44604890)
chr2 (168-226)||(45235918-45235976)
chr2 (182-227)||(23145812-23145857)
chr2 (182-227)||(23557602-23557647)
chr2 (185-226)||(34752779-34752820)
chr2 (196-228)||(26684750-26684782)
chr2 (200-228)||(27466262-27466290)
chr2 (167-227)||(29419988-29420048)
chr2 (184-227)||(35017793-35017837)
chr2 (168-228)||(44643497-44643557)
[»] chr6 (24 HSPs)
chr6 (167-228)||(12222016-12222077)
chr6 (167-227)||(14975179-14975239)
chr6 (120-228)||(1346939-1347044)
chr6 (120-228)||(1354810-1354915)
chr6 (167-228)||(8409218-8409279)
chr6 (167-227)||(9161099-9161159)
chr6 (168-226)||(32728256-32728314)
chr6 (167-228)||(6024208-6024269)
chr6 (167-220)||(29355956-29356009)
chr6 (184-228)||(3815193-3815237)
chr6 (167-226)||(2166511-2166570)
chr6 (167-226)||(2178144-2178203)
chr6 (184-227)||(13905095-13905138)
chr6 (167-225)||(12063445-12063503)
chr6 (167-227)||(12889402-12889462)
chr6 (196-228)||(24734608-24734640)
chr6 (190-225)||(19649289-19649324)
chr6 (185-228)||(20400642-20400685)
chr6 (197-227)||(2755553-2755583)
chr6 (194-228)||(8417447-8417481)
chr6 (166-227)||(33922926-33922987)
chr6 (184-228)||(1941830-1941874)
chr6 (184-228)||(14553487-14553530)
chr6 (168-228)||(15866137-15866197)
[»] chr8 (33 HSPs)
chr8 (120-228)||(13160677-13160783)
chr8 (120-228)||(12670303-12670408)
chr8 (167-228)||(20869595-20869656)
chr8 (167-228)||(30454194-30454255)
chr8 (167-227)||(20284172-20284232)
chr8 (167-227)||(21070801-21070861)
chr8 (120-228)||(36720771-36720878)
chr8 (167-228)||(2626494-2626555)
chr8 (167-228)||(17823551-17823612)
chr8 (167-228)||(28407391-28407452)
chr8 (167-228)||(28817725-28817786)
chr8 (167-228)||(39461095-39461156)
chr8 (167-223)||(18164858-18164914)
chr8 (184-228)||(24245426-24245470)
chr8 (120-226)||(24365112-24365218)
chr8 (168-220)||(11748282-11748334)
chr8 (120-225)||(29521738-29521842)
chr8 (120-228)||(45071240-45071346)
chr8 (120-228)||(44530124-44530231)
chr8 (129-228)||(26954107-26954206)
chr8 (186-228)||(35261654-35261696)
chr8 (167-228)||(6760797-6760858)
chr8 (167-228)||(7136628-7136689)
chr8 (167-224)||(30962872-30962929)
chr8 (171-227)||(42083802-42083858)
chr8 (167-227)||(44781605-44781665)
chr8 (195-228)||(25250497-25250530)
chr8 (184-221)||(31457155-31457192)
chr8 (167-224)||(35105902-35105959)
chr8 (184-228)||(8897880-8897924)
chr8 (187-227)||(11001069-11001109)
chr8 (187-227)||(22598133-22598173)
chr8 (64-107)||(33867039-33867083)
[»] scaffold0187 (2 HSPs)
scaffold0187 (167-228)||(10147-10208)
scaffold0187 (167-228)||(20475-20536)
[»] chr7 (50 HSPs)
chr7 (120-226)||(10693126-10693229)
chr7 (120-228)||(21172062-21172167)
chr7 (120-228)||(19426942-19427049)
chr7 (167-228)||(32758236-32758297)
chr7 (167-228)||(42495934-42495995)
chr7 (167-228)||(42798644-42798705)
chr7 (167-228)||(42805499-42805560)
chr7 (167-228)||(43557447-43557508)
chr7 (167-228)||(47077952-47078013)
chr7 (167-227)||(40463853-40463913)
chr7 (184-228)||(48735237-48735281)
chr7 (167-226)||(7193062-7193121)
chr7 (120-227)||(19265791-19265896)
chr7 (167-227)||(29907393-29907455)
chr7 (185-228)||(42476848-42476891)
chr7 (167-228)||(2541118-2541180)
chr7 (167-228)||(11617687-11617748)
chr7 (167-228)||(27629609-27629670)
chr7 (167-228)||(33872008-33872069)
chr7 (175-227)||(3469286-3469338)
chr7 (168-228)||(7794606-7794666)
chr7 (184-228)||(13805077-13805121)
chr7 (167-227)||(28362244-28362304)
chr7 (120-221)||(42391153-42391251)
chr7 (184-226)||(6736867-6736909)
chr7 (170-228)||(14732924-14732982)
chr7 (170-228)||(34626309-34626367)
chr7 (187-228)||(1424029-1424070)
chr7 (187-228)||(5180276-5180317)
chr7 (167-228)||(7644931-7644992)
chr7 (167-228)||(18327009-18327070)
chr7 (174-223)||(28078237-28078286)
chr7 (167-228)||(39123865-39123926)
chr7 (167-228)||(46354169-46354230)
chr7 (167-224)||(47716438-47716495)
chr7 (118-224)||(11741774-11741877)
chr7 (118-227)||(19266426-19266534)
chr7 (184-228)||(22699086-22699130)
chr7 (184-228)||(35334930-35334974)
chr7 (167-227)||(48123583-48123643)
chr7 (196-227)||(14099134-14099165)
chr7 (196-227)||(14409151-14409182)
chr7 (185-228)||(29140477-29140520)
chr7 (167-225)||(21447568-21447626)
chr7 (191-225)||(28685257-28685291)
chr7 (167-227)||(1524285-1524345)
chr7 (120-156)||(2662988-2663024)
chr7 (167-227)||(16341254-16341314)
chr7 (167-227)||(23419773-23419833)
chr7 (167-227)||(44123720-44123780)
[»] chr5 (29 HSPs)
chr5 (167-228)||(37024653-37024714)
chr5 (167-228)||(38879556-38879617)
chr5 (167-227)||(39301099-39301159)
chr5 (120-228)||(41014294-41014400)
chr5 (128-228)||(43334177-43334277)
chr5 (167-225)||(22861765-22861823)
chr5 (120-228)||(24448865-24448972)
chr5 (120-228)||(35710288-35710393)
chr5 (120-228)||(8170037-8170142)
chr5 (167-228)||(1565406-1565467)
chr5 (167-228)||(4619205-4619266)
chr5 (167-228)||(27328727-27328788)
chr5 (182-227)||(39079880-39079925)
chr5 (167-227)||(23974756-23974816)
chr5 (167-227)||(28516533-28516593)
chr5 (120-216)||(32703411-32703504)
chr5 (118-227)||(2838754-2838862)
chr5 (118-155)||(9794429-9794466)
chr5 (167-228)||(31299607-31299668)
chr5 (184-219)||(1850624-1850659)
chr5 (167-226)||(22187262-22187321)
chr5 (193-223)||(12006455-12006485)
chr5 (170-223)||(10634248-10634301)
chr5 (196-225)||(28208235-28208264)
chr5 (184-225)||(30006303-30006344)
chr5 (187-228)||(31362454-31362495)
chr5 (195-227)||(209054-209086)
chr5 (184-228)||(22600429-22600473)
chr5 (167-223)||(34074661-34074717)
[»] chr3 (38 HSPs)
chr3 (167-228)||(8247788-8247849)
chr3 (167-228)||(10870050-10870111)
chr3 (120-227)||(22609764-22609869)
chr3 (167-224)||(13628891-13628948)
chr3 (167-228)||(13730703-13730764)
chr3 (167-228)||(29366821-29366882)
chr3 (167-228)||(46421136-46421197)
chr3 (167-228)||(52926309-52926370)
chr3 (120-228)||(16735438-16735544)
chr3 (120-228)||(26869704-26869810)
chr3 (167-226)||(34420743-34420802)
chr3 (167-226)||(39203515-39203574)
chr3 (120-227)||(45620881-45620988)
chr3 (167-228)||(1217087-1217148)
chr3 (167-224)||(5173819-5173876)
chr3 (167-228)||(7696984-7697045)
chr3 (170-227)||(26573125-26573182)
chr3 (170-227)||(53062036-53062093)
chr3 (184-228)||(4495780-4495824)
chr3 (166-226)||(9607202-9607262)
chr3 (167-223)||(30928246-30928302)
chr3 (167-222)||(7942993-7943048)
chr3 (120-228)||(22122970-22123075)
chr3 (120-228)||(40272865-40272972)
chr3 (167-217)||(516417-516467)
chr3 (167-228)||(6411920-6411981)
chr3 (184-228)||(26782363-26782407)
chr3 (184-226)||(25944468-25944510)
chr3 (167-228)||(12914134-12914195)
chr3 (195-228)||(25517300-25517333)
chr3 (127-156)||(31831265-31831294)
chr3 (122-155)||(52428532-52428565)
chr3 (167-227)||(19731000-19731060)
chr3 (187-227)||(31542411-31542451)
chr3 (167-227)||(35417914-35417974)
chr3 (64-115)||(45288059-45288111)
chr3 (120-156)||(45948891-45948927)
chr3 (167-227)||(53996665-53996725)
[»] chr1 (45 HSPs)
chr1 (167-228)||(34725195-34725256)
chr1 (167-228)||(46248052-46248113)
chr1 (167-227)||(18724644-18724704)
chr1 (120-228)||(32632610-32632716)
chr1 (167-227)||(33222983-33223043)
chr1 (167-226)||(38478379-38478438)
chr1 (167-228)||(27201645-27201706)
chr1 (167-228)||(27474279-27474340)
chr1 (167-228)||(47214509-47214570)
chr1 (167-227)||(14617037-14617097)
chr1 (168-228)||(19414437-19414497)
chr1 (184-228)||(20036218-20036262)
chr1 (169-228)||(20004193-20004252)
chr1 (120-228)||(23768373-23768480)
chr1 (168-227)||(52910216-52910275)
chr1 (170-227)||(2435889-2435946)
chr1 (167-228)||(6925098-6925159)
chr1 (167-228)||(18944641-18944702)
chr1 (171-228)||(22930170-22930227)
chr1 (182-227)||(25290162-25290207)
chr1 (167-228)||(30395827-30395888)
chr1 (167-228)||(46991802-46991863)
chr1 (184-228)||(8197041-8197085)
chr1 (167-227)||(17470445-17470505)
chr1 (184-228)||(34714621-34714665)
chr1 (167-227)||(35117867-35117927)
chr1 (184-228)||(40424740-40424784)
chr1 (120-225)||(45812590-45812692)
chr1 (184-227)||(2436009-2436052)
chr1 (177-228)||(18742070-18742121)
chr1 (185-228)||(19932869-19932912)
chr1 (182-228)||(4430140-4430186)
chr1 (170-228)||(6983911-6983969)
chr1 (167-224)||(9939463-9939520)
chr1 (167-224)||(22327101-22327158)
chr1 (195-228)||(41319933-41319966)
chr1 (167-227)||(11596512-11596572)
chr1 (167-227)||(50760325-50760385)
chr1 (167-227)||(50811938-50811998)
chr1 (184-227)||(10378841-10378884)
chr1 (167-226)||(25468362-25468421)
chr1 (184-227)||(35019229-35019272)
chr1 (167-228)||(10668218-10668284)
chr1 (193-226)||(44485234-44485267)
chr1 (167-228)||(45402093-45402153)
[»] scaffold0258 (1 HSPs)
scaffold0258 (166-227)||(13121-13182)
[»] scaffold0168 (1 HSPs)
scaffold0168 (167-228)||(30554-30615)
[»] scaffold0024 (1 HSPs)
scaffold0024 (182-226)||(83852-83896)
[»] scaffold0049 (1 HSPs)
scaffold0049 (167-228)||(58952-59013)
[»] scaffold1176 (1 HSPs)
scaffold1176 (184-228)||(1701-1745)
[»] scaffold0057 (3 HSPs)
scaffold0057 (184-228)||(24883-24927)
scaffold0057 (185-228)||(46806-46849)
scaffold0057 (184-226)||(46999-47041)
[»] scaffold0254 (1 HSPs)
scaffold0254 (167-226)||(4134-4193)
[»] scaffold0311 (1 HSPs)
scaffold0311 (186-228)||(10785-10827)
[»] scaffold0223 (1 HSPs)
scaffold0223 (167-228)||(11107-11167)
[»] scaffold0031 (1 HSPs)
scaffold0031 (167-228)||(43104-43165)
[»] scaffold0194 (1 HSPs)
scaffold0194 (184-225)||(24642-24683)
[»] scaffold0116 (1 HSPs)
scaffold0116 (195-228)||(8866-8899)


Alignment Details
Target: scaffold0005 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 226338 - 226566
Alignment:
Q  1 caaacattaaccaaccactgtataaatttaccataaccttagaaaataaaataaaaaggtcaaggcaacctggtgc-ctaaagcttttgcatacgcaggg 99  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||| ||||||||||| ||||    
T  226338 caaacattaaccagccactgtataaatttaccataaccttagaaaataaaataaaaaggccagggcaacctggtgcactaaagtttttgcatacgtaggg 226437  T
Q  100 ttcgggaaaaggtcccaagatcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgac 199  Q
    ||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||        || |||||||||||| ||| ||||||||||||||||    
T  226438 ttcgggaaaaggtcccaaggtcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgac 226537  T
Q  200 ctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||||||||||||||||||||    
T  226538 ctttcagtcacatgacaacaactttacca 226566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 152; Significance: 1e-80; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 14591040 - 14590812
Alignment:
Q  1 caaacattaaccaaccactgtataaatttaccataaccttagaaaataaaataaaaaggtcaaggcaacctggtgc-ctaaagcttttgcatacgcaggg 99  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |||||| ||||||||||| ||||    
T  14591040 caaacattaaccagccactgtataaatttaccataaccttagaaaataaaataaaaaggccagggcaacctggtgcactaaagtttttgcatacgtaggg 14590941  T
Q  100 ttcgggaaaaggtcccaagatcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgac 199  Q
    ||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||        || |||||||||||| ||| ||||||||||||||||    
T  14590940 ttcgggaaaaggtcccaaggtcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgtttctaggacttgaatccgtgac 14590841  T
Q  200 ctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||||||||||||||||||||    
T  14590840 ctttcagtcacatgacaacaactttacca 14590812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 6430679 - 6430785
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  |||||||||||| | | |||||||| |||||||||||||||||||||||||||    
T  6430679 tcccaccatttggtgtattgtacgcagccttaccctgtttttaca--caagaggctgtttccatgacttgaacccgtgacctttcagtcacatgacaaca 6430776  T
Q  220 actttacca 228  Q
    |||||||||    
T  6430777 actttacca 6430785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 48598878 - 48598983
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  |||||||||||| | | |||||||| |||||||||||||||||||||||||||    
T  48598878 tcccaccatttggtgtattgtacgcagccttaccct---gttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaaca 48598974  T
Q  220 actttacca 228  Q
    |||||||||    
T  48598975 actttacca 48598983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 16911598 - 16911537
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| ||| |||||||| ||||||||||| ||||||||||||||||||||||||    
T  16911598 caagaggctgtttctaggacttgaacccgtgacctttaagtcacatgacaacaactttacca 16911537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 487234 - 487294
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||||| |||| | |||||||||| |||||||||||||||||||||||||||||||||||    
T  487234 caagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttacc 487294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 5648340 - 5648234
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  |||||||||||| | | |||||||| |||||||||| ||||||||||||||||    
T  5648340 tcccaccatttggtgtattgtacgcagccttaccctgtttttaca--caagaggctgtttccaggacttgaacccgtgaccttacagtcacatgacaaca 5648243  T
Q  220 actttacca 228  Q
    |||||||||    
T  5648242 actttacca 5648234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 47528583 - 47528688
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  |||||||||||| | | |||||||| | |||||||||||||||||||||||||    
T  47528583 tcccaccatttggtgtattgtacgcagccttaccct---gttttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaaca 47528679  T
Q  220 actttacca 228  Q
    |||||||||    
T  47528680 actttacca 47528688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 5306762 - 5306823
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| |||||||||||||||||||||||| |||||||||||    
T  5306762 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacatcaactttacca 5306823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 14983870 - 14983809
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | ||||||||||||||||||||| || ||| ||||||||||||||||||    
T  14983870 caagaggctgtttcaaagacttgaatccgtgaccttccaatcatatgacaacaactttacca 14983809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 16408702 - 16408763
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| |||||||||| |||||||||||||||||||||||||    
T  16408702 caagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacca 16408763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 11054262 - 11054306
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  11054262 gacttgaacccgtgacctttcagtcacatgacaacaactttacca 11054306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 23501812 - 23501768
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  23501812 gacttgaacccgtgacctttcagtcacatgacaacaactttacca 23501768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 42164247 - 42164307
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||||| |||| | |||||||||| |||||||||||||||||||||||||||| ||||||    
T  42164247 caagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaattttacc 42164307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 54730285 - 54730225
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||||||| ||| |||||||| |||||||||||  ||||||||||||||||||||||    
T  54730285 caagaggctgtttctaggacttgaacccgtgaccttttggtcacatgacaacaactttacc 54730225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 20225064 - 20224959
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  ||||||| |||| | | |||||||| || ||||||||||||||||||||||||    
T  20225064 tcccaccatttggtgtattgtacgcagccttaccct---gttttacacaagaggttgtttccaggacttgaacccatgacctttcagtcacatgacaaca 20224968  T
Q  220 actttacca 228  Q
    |||||||||    
T  20224967 actttacca 20224959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 21647000 - 21646939
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| | |||||||| |||||||||||||||||||||||||    
T  21647000 caagaggctgtttccaggacttgaacctgtgaccttccagtcacatgacaacaactttacca 21646939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 40915865 - 40915804
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| ||||||||||  ||||||||||||||||||||||||    
T  40915865 caagaggctgtttccaggacttgaacccgtgaccttatagtcacatgacaacaactttacca 40915804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 187 - 227
Target Start/End: Original strand, 17315417 - 17315457
Alignment:
Q  187 ttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  17315417 ttgaacccgtgacctttcagtcacatgacaacaactttacc 17315457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 35567206 - 35567146
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||| ||||||| | |||||||||| || |||||||||||| |||||||||||||||||||    
T  35567206 caagtggctgtttccaagacttgaacccatgacctttcagttacatgacaacaactttacc 35567146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 41018847 - 41018945
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||||||||||||||||||| | ||||||||||||       |  ||||||| |||| | | |||||||| |||||||||||||||||| ||||||||    
T  41018847 tcccactatttggtgtattgtacgtagccttaccctaattttaca--caagaggttgtttccaggacttgaacccgtgacctttcagtcacgtgacaaca 41018944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 44363248 - 44363292
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||||  |||||||||||||||||||||||||||||||||||    
T  44363248 gacttgaactcgtgacctttcagtcacatgacaacaactttacca 44363292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 54640438 - 54640498
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||||||| | |||||||||| |||||||||||||| ||| ||||||||| ||||||    
T  54640438 caagaggctgtttccaagacttgaacccgtgacctttcagccacgtgacaacaattttacc 54640498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 222
Target Start/End: Original strand, 39077893 - 39077948
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaact 222  Q
    |||||||||||| | | |||||||| ||||||||||||| ||||||||||||||||    
T  39077893 caagaggctgtttccaggacttgaacccgtgacctttcaatcacatgacaacaact 39077948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 43035267 - 43035224
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||| |||||||||||||||||| ||||||||||||||||    
T  43035267 gacttgaacccgtgacctttcagtcacgtgacaacaactttacc 43035224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 223
Target Start/End: Complemental strand, 54175082 - 54175043
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactt 223  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  54175082 gacttgaatccgtgacatttcagtcacatgacaacaactt 54175043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 223
Target Start/End: Original strand, 17043447 - 17043549
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  |||||||||||| | | |||||||| | |||||||||||||||| ||||||||    
T  17043447 tcccaccatttggtgtattgtacgcagccttaccct-gtattttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacttgacaaca 17043545  T
Q  220 actt 223  Q
    ||||    
T  17043546 actt 17043549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 23580307 - 23580365
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaacttta 225  Q
    ||||||||| || |||  ||||||| |||||||||||||||||| ||||||||||||||    
T  23580307 caagaggctctttctagaacttgaacccgtgacctttcagtcacgtgacaacaacttta 23580365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 224
Target Start/End: Original strand, 49938552 - 49938594
Alignment:
Q  182 aagacttgaatccgtgacctttcagtcacatgacaacaacttt 224  Q
    |||||||||||| |||||||||||||||| |||||||||||||    
T  49938552 aagacttgaatctgtgacctttcagtcacgtgacaacaacttt 49938594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 5313113 - 5313154
Alignment:
Q  187 ttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||| ||||||||||||| ||||||||||||||||||||||    
T  5313113 ttgaacccgtgacctttcaatcacatgacaacaactttacca 5313154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 224
Target Start/End: Original strand, 30496419 - 30496476
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaacttt 224  Q
    |||||||||||| | | ||||||||  ||||||||||||||||| |||||||||||||    
T  30496419 caagaggctgtttccatgacttgaacacgtgacctttcagtcacgtgacaacaacttt 30496476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 30639416 - 30639355
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||| ||||| | | |||||||| | ||||||||||||||||| ||||||||||||||||    
T  30639416 caagagtctgtttccaggacttgaaccagtgacctttcagtcacaagacaacaactttacca 30639355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 224
Target Start/End: Original strand, 49938689 - 49938746
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaacttt 224  Q
    |||||||||||| | | |||||||| | |||||||||||||||| |||||||||||||    
T  49938689 caagaggctgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaacttt 49938746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 9987887 - 9987923
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttacccta 156  Q
    |||||| ||||||||||||||||||||||||||||||    
T  9987887 tcccaccatttggtgtattgtatgcagccttacccta 9987923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 12257692 - 12257752
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||| |||||| ||| || ||||| ||||||||||||| |||| ||||||||||||||||    
T  12257692 caagacgctgtttctaggatttgaacccgtgacctttcaatcacgtgacaacaactttacc 12257752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 19027867 - 19027823
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||| |||||||||||||||||| ||||||||||| |||||    
T  19027867 gacttgaacccgtgacctttcagtcacgtgacaacaactctacca 19027823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 54967029 - 54966997
Alignment:
Q  195 gtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||||||||||||||||||||||||||||    
T  54967029 gtgacctttcagtcacatgacaacaactttacc 54966997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 226
Target Start/End: Original strand, 3580951 - 3580994
Alignment:
Q  183 agacttgaatccgtgacctttcagtcacatgacaacaactttac 226  Q
    |||||||||  |||||| ||||||||||||||||||||||||||    
T  3580951 agacttgaactcgtgacttttcagtcacatgacaacaactttac 3580994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 155
Target Start/End: Original strand, 8473675 - 8473710
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccct 155  Q
    |||||| |||||||||||||||||||||||||||||    
T  8473675 tcccaccatttggtgtattgtatgcagccttaccct 8473710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 228
Target Start/End: Complemental strand, 20405103 - 20405068
Alignment:
Q  193 ccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||| |||||||||||||||||||||||||    
T  20405103 ccgtgaccttccagtcacatgacaacaactttacca 20405068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 32629367 - 32629418
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaac 218  Q
    |||||||||||| | | || ||||| ||||||||||||||||||||||||||    
T  32629367 caagaggctgtttcgaggatttgaacccgtgacctttcagtcacatgacaac 32629418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 47441646 - 47441689
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||| | |||||||||||||||| ||||||||||||||||    
T  47441646 gacttgaacctgtgacctttcagtcacgtgacaacaactttacc 47441689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 186 - 220
Target Start/End: Original strand, 7385594 - 7385628
Alignment:
Q  186 cttgaatccgtgacctttcagtcacatgacaacaa 220  Q
    |||||| ||||||||||||||||||||||||||||    
T  7385594 cttgaacccgtgacctttcagtcacatgacaacaa 7385628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Complemental strand, 10660409 - 10660379
Alignment:
Q  198 acctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||||||||||||||||||||||    
T  10660409 acctttcagtcacatgacaacaactttacca 10660379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Complemental strand, 10874554 - 10874524
Alignment:
Q  198 acctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||||||||||||||||||||||    
T  10874554 acctttcagtcacatgacaacaactttacca 10874524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 25463158 - 25463108
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaa 217  Q
    ||||||| |||| | | |||||||| |||||||||||||||||||||||||    
T  25463158 caagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaa 25463108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 30690282 - 30690340
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaacttta 225  Q
    ||||||||| || | | |||||||| |||||||||||||||||| ||||||| ||||||    
T  30690282 caagaggctttttccaggacttgaacccgtgacctttcagtcacttgacaaccacttta 30690340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 30352690 - 30352751
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | ||||  || |||||||||||| ||||| |||||||||||||||||    
T  30352690 caagaggctgtttccaggactctaacccgtgacctttcggtcacttgacaacaactttacca 30352751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 37494887 - 37494826
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||| |||| | | |||||||| | |||||||||||||| |||| ||||||||||||||    
T  37494887 caagaggttgtttccaggacttgaacctgtgacctttcagtcgcatggcaacaactttacca 37494826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 228
Target Start/End: Original strand, 13256525 - 13256557
Alignment:
Q  196 tgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||| |||||||||||||||||||||||||    
T  13256525 tgaccttccagtcacatgacaacaactttacca 13256557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 39029160 - 39029220
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||||||| | ||| |||||| |  |||||||| ||||||| |||||||||||||||    
T  39029160 caagaggctgtttccaaggcttgaacctatgaccttttagtcacacgacaacaactttacc 39029220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 6e-21; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 17896342 - 17896234
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||| ||||||| ||||||||||||||       |  ||||||| |||| ||| ||||||||||||||||||||| ||||||||||||||    
T  17896342 tcccaccatttggtatattgtacgcagccttaccctatttttttacacaagaggttgtttctaggacttgaatccgtgacctttcggtcacatgacaaca 17896243  T
Q  220 actttacca 228  Q
    |||||||||    
T  17896242 actttacca 17896234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 12023972 - 12024078
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  |||||||||||| | | |||||||| |||||||||||||||||||||||||||    
T  12023972 tcccaccatttggtgtattgtacgcagccttaccctgtttttaca--caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaaca 12024069  T
Q  220 actttacca 228  Q
    |||||||||    
T  12024070 actttacca 12024078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 14530354 - 14530293
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||    
T  14530354 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 14530293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 25079817 - 25079878
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||| |||| |||||||||||| |||||||||| |||||||||||||||||||||||||    
T  25079817 caagaggttgtttctaagacttgaacccgtgaccttccagtcacatgacaacaactttacca 25079878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 99362 - 99421
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttac 226  Q
    |||||||||||| ||| |||||||| |||||||||||||||||| |||||||||||||||    
T  99362 caagaggctgtttctaggacttgaacccgtgacctttcagtcacgtgacaacaactttac 99421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 8455369 - 8455476
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  |||||||||||| | | |||||||| |||||||||| ||||||||||||||||    
T  8455369 tcccaccatttggtgtattgtacgcagccttaccct-gtgttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaaca 8455467  T
Q  220 actttacca 228  Q
    |||||||||    
T  8455468 actttacca 8455476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 23397846 - 23397741
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| | ||||||||||||       |  |||||||||||| | | |||||||| || ||||||||||||||||||||||||    
T  23397846 tcccaccatttggtgtattgtacgtagccttaccctatttt---acacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaaca 23397750  T
Q  220 actttacca 228  Q
    |||||||||    
T  23397749 actttacca 23397741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 118 - 228
Target Start/End: Original strand, 25249789 - 25249897
Alignment:
Q  118 gatcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaa 217  Q
    |||||||| ||||||||||||||| |||||||||||||        |  |||||| ||||| | | |||||||| |||||||||| ||||||||||||||    
T  25249789 gatcccaccatttggtgtattgtacgcagccttaccctgtttgtaca--caagagactgtttccatgacttgaacccgtgaccttacagtcacatgacaa 25249886  T
Q  218 caactttacca 228  Q
    |||||||||||    
T  25249887 caactttacca 25249897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 7214570 - 7214509
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||| ||||| | |||||||||| || |||||||||||||||||||||||||||||||||    
T  7214570 caagagactgtttccaagacttgaacccatgacctttcagtcacatgacaacaactttacca 7214509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 24200724 - 24200785
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| ||||||| ||||||||||||||||||||||||||||    
T  24200724 caagaggctgtttccaggacttgaacccgtgacttttcagtcacatgacaacaactttacca 24200785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 5841060 - 5841006
Alignment:
Q  171 aggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaacttta 225  Q
    |||||||| ||| |||||||| |||||||||| ||||||||||||||||||||||    
T  5841060 aggctgtttctaggacttgaacccgtgaccttccagtcacatgacaacaacttta 5841006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 10543734 - 10543676
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaacttta 225  Q
    |||||||| ||| | | |||||||| |||||||||||||||||||||||||||||||||    
T  10543734 caagaggccgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 10543676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 11514472 - 11514411
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | || ||||| |||||||||| |||||||||||||||||||||||||    
T  11514472 caagaggctgtttccaggagttgaacccgtgaccttccagtcacatgacaacaactttacca 11514411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 21779358 - 21779419
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||  | | |||||||| ||||||||||||||||||||||||||||||| ||||    
T  21779358 caagaggctgtctccaggacttgaacccgtgacctttcagtcacatgacaacaacttcacca 21779419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 40416970 - 40417031
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||| |||| | | |||||||| |||||||||| |||||||||||||||||||||||||    
T  40416970 caagaggttgtttccatgacttgaacccgtgaccttccagtcacatgacaacaactttacca 40417031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 4516450 - 4516510
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||||||| |||  ||||||||  |||||||||||||||| ||||||||||||||||    
T  4516450 caagaggctgtttctagaacttgaatatgtgacctttcagtcacgtgacaacaactttacc 4516510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 17380335 - 17380391
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactt 223  Q
    ||||||| |||| | |||||||||| |||||||||||| ||||||||||||||||||    
T  17380335 caagaggttgtttccaagacttgaacccgtgacctttcggtcacatgacaacaactt 17380391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 17668021 - 17667977
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||| |||||||||| |||||||||||||||||||||||||    
T  17668021 gacttgaacccgtgaccttccagtcacatgacaacaactttacca 17667977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 21377172 - 21377232
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||||| |||| ||| ||||||||  ||| ||||||||||||||||||||||||||||||    
T  21377172 caagaggatgtttctatgacttgaactcgtaacctttcagtcacatgacaacaactttacc 21377232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 225
Target Start/End: Original strand, 31158539 - 31158598
Alignment:
Q  166 gcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaacttta 225  Q
    |||||||||||||   ||||||| || || ||||||||||||||||||||||||||||||    
T  31158539 gcaagaggctgttttgaagactttaacccttgacctttcagtcacatgacaacaacttta 31158598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 225
Target Start/End: Complemental strand, 5450301 - 5450263
Alignment:
Q  187 ttgaatccgtgacctttcagtcacatgacaacaacttta 225  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  5450301 ttgaacccgtgacctttcagtcacatgacaacaacttta 5450263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 228
Target Start/End: Complemental strand, 22371090 - 22371032
Alignment:
Q  170 gaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||||| | | |||||||| |||||||||  |||||||||||||||||||||||||    
T  22371090 gaggctgtttccaggacttgaacccgtgacctcccagtcacatgacaacaactttacca 22371032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 17623600 - 17623539
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||| |||| | | |||||||| |||||||||| ||||| |||||||||||||||||||    
T  17623600 caagaggttgtttcgaggacttgaacccgtgaccttccagtcgcatgacaacaactttacca 17623539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 17705531 - 17705470
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||| ||| | | |||||||| ||||||||||  ||||||||||||||||||||||||    
T  17705531 caagaggcggtttccaggacttgaacccgtgaccttctagtcacatgacaacaactttacca 17705470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 27573657 - 27573596
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| |   |||||||| |  |||||||||||||||||||||||||||||||||    
T  27573657 caagaggctgttgcccggacttgaaccaatgacctttcagtcacatgacaacaactttacca 27573596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 19977814 - 19977874
Alignment:
Q  168 aagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||||||| | |  ||||||| |||||||||||| |||||||||||||||||| ||||    
T  19977814 aagaggctgtttccagaacttgaacccgtgacctttcggtcacatgacaacaacttcacca 19977874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 227
Target Start/End: Complemental strand, 9671261 - 9671156
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttc-agtcacatgacaac 218  Q
    |||||| ||||||||||||||| |||||||||||||        |  |||||||||||| | | || ||||| ||||||| |||| ||||||||||||||    
T  9671261 tcccaccatttggtgtattgtacgcagccttaccct---gttttacacaagaggctgtttccaggatttgaacccgtgacatttccagtcacatgacaac 9671165  T
Q  219 aactttacc 227  Q
    |||||||||    
T  9671164 aactttacc 9671156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 33795304 - 33795261
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||    
T  33795304 gacttgaacccgtgacctttcaatcacgtgacaacaactttacc 33795261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 228
Target Start/End: Original strand, 39914431 - 39914466
Alignment:
Q  193 ccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||| |||||||||||||||||||||||||    
T  39914431 ccgtgaccttccagtcacatgacaacaactttacca 39914466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 228
Target Start/End: Complemental strand, 14544068 - 14544038
Alignment:
Q  198 acctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||||||||||||||||||||||    
T  14544068 acctttcagtcacatgacaacaactttacca 14544038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 218
Target Start/End: Complemental strand, 25641521 - 25641487
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaac 218  Q
    |||||||| ||||||||||||||||||||||||||    
T  25641521 gacttgaacccgtgacctttcagtcacatgacaac 25641487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 44604890 - 44604832
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaacttta 225  Q
    ||||||| |||| | | |||||||| | |||||||| ||||||||||||||||||||||    
T  44604890 caagaggttgtttccaggacttgaacctgtgaccttccagtcacatgacaacaacttta 44604832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 45235918 - 45235976
Alignment:
Q  168 aagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttac 226  Q
    ||||| ||||| ||| ||||||||  ||||| ||||||||||||||| |||||||||||    
T  45235918 aagagactgtttctaggacttgaactcgtgatctttcagtcacatgagaacaactttac 45235976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 23145812 - 23145857
Alignment:
Q  182 aagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||||| ||||||||||||||||||   ||||||||||||||    
T  23145812 aagacttgaacccgtgacctttcagtcacgctacaacaactttacc 23145857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 23557602 - 23557647
Alignment:
Q  182 aagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||||| ||||||||||||||||||   ||||||||||||||    
T  23557602 aagacttgaacccgtgacctttcagtcacgctacaacaactttacc 23557647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 34752779 - 34752820
Alignment:
Q  185 acttgaatccgtgacctttcagtcacatgacaacaactttac 226  Q
    |||||||| ||||||||||||||||||||| ||||| |||||    
T  34752779 acttgaattcgtgacctttcagtcacatgataacaagtttac 34752820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 228
Target Start/End: Original strand, 26684750 - 26684782
Alignment:
Q  196 tgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||| ||||||||||||||||||||||    
T  26684750 tgacctttcaatcacatgacaacaactttacca 26684782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 228
Target Start/End: Original strand, 27466262 - 27466290
Alignment:
Q  200 ctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||||||||||||||||||||    
T  27466262 ctttcagtcacatgacaacaactttacca 27466290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 29419988 - 29420048
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||||| |||| | | ||||||||  ||||||||||||||||  ||||||||||||||||    
T  29419988 caagaggttgtttccaggacttgaactcgtgacctttcagtcatgtgacaacaactttacc 29420048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 35017837 - 35017793
Alignment:
Q  184 gacttgaatccgtgacctttca-gtcacatgacaacaactttacc 227  Q
    ||||| || ||||||||||||| ||||||||||||||||||||||    
T  35017837 gacttaaacccgtgacctttcaagtcacatgacaacaactttacc 35017793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 44643557 - 44643497
Alignment:
Q  168 aagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||| || |||  |||||||  |||||||||||||||||||||  ||||||||||||    
T  44643557 aagaggctctttctagaacttgaacacgtgacctttcagtcacatgatgacaactttacca 44643497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 9e-20; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 12222016 - 12222077
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||    
T  12222016 caagaggctgtttccaagacttgaacccgtgacctttcagtcacatgacaacaactttacca 12222077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 14975179 - 14975239
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||||||| | | ||||||||||||||||||| ||||||||||||||||||||||||    
T  14975179 caagaggctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaactttacc 14975239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 1347044 - 1346939
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  |||| ||||||| | | |||||||| |||||||||||||||||||||||||||    
T  1347044 tcccaccatttggtgtattgtacgcagccttaccct---gttttacacaagtggctgtttccaggacttgaacccgtgacctttcagtcacatgacaaca 1346948  T
Q  220 actttacca 228  Q
    |||||||||    
T  1346947 actttacca 1346939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 1354810 - 1354915
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  |||||||||||| | | |||||||| | |||||||||||||||||||||||||    
T  1354810 tcccaccatttggtgtattgtacgcagccttaccct---gttttacacaagaggctgtttccaggacttgaaccagtgacctttcagtcacatgacaaca 1354906  T
Q  220 actttacca 228  Q
    |||||||||    
T  1354907 actttacca 1354915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 8409279 - 8409218
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||| ||| | | ||||||||||||||||||||||||||||| |||||||||||||||    
T  8409279 caagaggcagtttccaggacttgaatccgtgacctttcagtcacattacaacaactttacca 8409218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 9161159 - 9161099
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||||||| | | |||||||| | |||||||||||||||||||||||||||||||||    
T  9161159 caagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttacc 9161099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 32728256 - 32728314
Alignment:
Q  168 aagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttac 226  Q
    |||||| |||| | || ||||||||| ||||||||||||||||||||||||||||||||    
T  32728256 aagaggttgtttccaaaacttgaatctgtgacctttcagtcacatgacaacaactttac 32728314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 6024269 - 6024208
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| ||| || ||||| |||||||||| || ||||||||||||||||||||||    
T  6024269 caagaggctgtttctaggatttgaaaccgtgaccttccaatcacatgacaacaactttacca 6024208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 29355956 - 29356009
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaa 220  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||    
T  29355956 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 29356009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 3815193 - 3815237
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||    
T  3815193 gacttgaacccgtgacatttcagtcacatgacaacaactttacca 3815237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 2166511 - 2166570
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttac 226  Q
    ||||||| |||| | | |||||||| |||||||||||||||||||| |||||||||||||    
T  2166511 caagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttac 2166570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 2178144 - 2178203
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttac 226  Q
    ||||||| |||| | | |||||||| |||||||||||||||||||| |||||||||||||    
T  2178144 caagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttac 2178203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 13905095 - 13905138
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||  |||||||||||||||||||||||||||||||||||    
T  13905095 gacttgagcccgtgacctttcagtcacatgacaacaactttacc 13905138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 12063503 - 12063445
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaacttta 225  Q
    ||||||||| || ||| |||||||| |||||||||||||||| ||||| ||||||||||    
T  12063503 caagaggctatttctaggacttgaacccgtgacctttcagtctcatgataacaacttta 12063445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 12889462 - 12889402
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||||||||||   |||||||||| | ||||||||||| |||| ||||||||||||||||    
T  12889462 caagaggctgttttcaagacttgaacctgtgacctttcactcacgtgacaacaactttacc 12889402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 228
Target Start/End: Complemental strand, 24734640 - 24734608
Alignment:
Q  196 tgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||||||||||||||||||||||||    
T  24734640 tgacctttcagtcacatgacaacaactttacca 24734608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 190 - 225
Target Start/End: Original strand, 19649289 - 19649324
Alignment:
Q  190 aatccgtgacctttcagtcacatgacaacaacttta 225  Q
    ||||||||| ||||||||||||||||||||||||||    
T  19649289 aatccgtgatctttcagtcacatgacaacaacttta 19649324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 20400685 - 20400642
Alignment:
Q  185 acttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||| | |||||||||||||||||||||||||||| |||||    
T  20400685 acttgaacctgtgacctttcagtcacatgacaacaactatacca 20400642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Original strand, 2755553 - 2755583
Alignment:
Q  197 gacctttcagtcacatgacaacaactttacc 227  Q
    |||||||||||||||||||||||||||||||    
T  2755553 gacctttcagtcacatgacaacaactttacc 2755583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 228
Target Start/End: Complemental strand, 8417481 - 8417447
Alignment:
Q  194 cgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||| ||||||||||||||||||||||||||||    
T  8417481 cgtgacatttcagtcacatgacaacaactttacca 8417447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 33922926 - 33922987
Alignment:
Q  166 gcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||||||  ||| ||| |||||||| | ||||| ||||||||| |||||||||||||||||    
T  33922926 gcaagaggacgtttctaggacttgaacctgtgacttttcagtcaaatgacaacaactttacc 33922987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 1941874 - 1941830
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||| |||||| |||||| |||||| ||||||||||||||||||    
T  1941874 gacttcaatccgcgaccttccagtcagatgacaacaactttacca 1941830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 14553530 - 14553487
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||| | ||||||||| ||||||||||||||||||||||||    
T  14553530 gacttgaacctgtgaccttt-agtcacatgacaacaactttacca 14553487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 15866137 - 15866197
Alignment:
Q  168 aagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||||||| | | || ||||| || |||||||||| ||||||| ||||||||||||||    
T  15866137 aagaggctgtttccaggaattgaacccatgacctttcaatcacatgccaacaactttacca 15866197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 13160783 - 13160677
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  |||||||||||| ||| |||||||| |||||||||| ||||||||||||||||    
T  13160783 tcccaccatttggtgtattgtacgcagccttaccctgtttttaca--caagaggctgtttctaggacttgaacccgtgaccttacagtcacatgacaaca 13160686  T
Q  220 actttacca 228  Q
    |||||||||    
T  13160685 actttacca 13160677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 12670303 - 12670408
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  |||||||||||| | | |||||||| |||||||||||||||||||||||||||    
T  12670303 tcccaccatttggtgtattgtacgcagccttaccct---gttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaaca 12670399  T
Q  220 actttacca 228  Q
    |||||||||    
T  12670400 actttacca 12670408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 20869595 - 20869656
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||    
T  20869595 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 20869656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 30454194 - 30454255
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||    
T  30454194 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 30454255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 20284172 - 20284232
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||||||| | | |||||||| |||||||||||||||||||||||||||||||||||    
T  20284172 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 20284232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 21070801 - 21070861
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||||||| | | |||||||| |||||||||||||||||||||||||||||||||||    
T  21070801 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 21070861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 36720878 - 36720771
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  |||||||||||| | | |||||||| |||||||||| ||||||||||||||||    
T  36720878 tcccaccatttggtgtattgtacgcagccttaccct-gttttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaaca 36720780  T
Q  220 actttacca 228  Q
    |||||||||    
T  36720779 actttacca 36720771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 2626555 - 2626494
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| |||||||||||| |||||||||||||||||||||||    
T  2626555 caagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttacca 2626494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 17823612 - 17823551
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| |||||||||||| |||||||||||||||||||||||    
T  17823612 caagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaactttacca 17823551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 28407452 - 28407391
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| |||||||||| |||||||||||||||||||||||||    
T  28407452 caagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacca 28407391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 28817725 - 28817786
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| |||||||||| |||||||||||||||||||||||||    
T  28817725 caagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacca 28817786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 39461095 - 39461156
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| |||||||||||||||| |||||||||||||||||||    
T  39461095 caagaggctgtttccaggacttgaacccgtgacctttcagtctcatgacaacaactttacca 39461156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 18164858 - 18164914
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactt 223  Q
    |||||||||||| | | |||||||| |||||||||||||||||||||||||||||||    
T  18164858 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactt 18164914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 24245470 - 24245426
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  24245470 gacttgaacccgtgacctttcagtcacatgacaacaactttacca 24245426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 226
Target Start/End: Original strand, 24365112 - 24365218
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||  |||||||||||||        |  |||||||||||| ||| | |||||| ||||||| ||| |||||||||||||||    
T  24365112 tcccaccatttggtgtattgttcgcagccttaccctgattttttacacaagaggctgtttctagggcttgaacccgtgacattttagtcacatgacaaca 24365211  T
Q  220 actttac 226  Q
    |||||||    
T  24365212 actttac 24365218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 11748334 - 11748282
Alignment:
Q  168 aagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaa 220  Q
    ||||||||||| | |||||||||| ||||||| ||||||||||||||||||||    
T  11748334 aagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaa 11748282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 225
Target Start/End: Original strand, 29521738 - 29521842
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  |||||||||||| | | |||||||| |||||||||| |||||||| |||||||    
T  29521738 tcccaccatttggtgtattgtacgcagccttaccctgttttttaaa-caagaggctgtttccaggacttgaacccgtgaccttccagtcacacgacaaca 29521836  T
Q  220 acttta 225  Q
    ||||||    
T  29521837 acttta 29521842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 45071346 - 45071240
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  |||||||||||| | |  ||||||| |||||||||| || |||||||||||||    
T  45071346 tcccaccatttggtgtattgtacgcagccttaccctgtttttaca--caagaggctgtttccagaacttgaacccgtgaccttacaatcacatgacaaca 45071249  T
Q  220 actttacca 228  Q
    |||||||||    
T  45071248 actttacca 45071240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 44530231 - 44530124
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  ||||||| |||| | |||||||||| ||||||||||  |||||||||||| ||    
T  44530231 tcccaccatttggtgtattgtacgcagccttaccct-gttttttacacaagaggttgtttccaagacttgaacccgtgaccttctagtcacatgacagca 44530133  T
Q  220 actttacca 228  Q
    |||||||||    
T  44530132 actttacca 44530124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 228
Target Start/End: Complemental strand, 26954206 - 26954107
Alignment:
Q  129 ttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||||||||| |||||||||||||        |  |||||||||||| | | |||||||| ||||||||||  | ||||||||||||||||||||||    
T  26954206 ttggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccaggacttgaacccgtgaccttctaatcacatgacaacaactttacca 26954107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 35261696 - 35261654
Alignment:
Q  186 cttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||| |||||||||| |||||||||||||||||||||||||    
T  35261696 cttgaacccgtgaccttccagtcacatgacaacaactttacca 35261654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 6760858 - 6760797
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| ||||||||||  ||||| ||||||||||||||||||    
T  6760858 caagaggctgtttccaggacttgaacccgtgaccttctagtcatatgacaacaactttacca 6760797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 7136628 - 7136689
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||| |||| | | |||||||| || ||||||| |||||||||||||||||||||||||    
T  7136628 caagaggttgtttccaggacttgaacccatgaccttccagtcacatgacaacaactttacca 7136689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 224
Target Start/End: Original strand, 30962872 - 30962929
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaacttt 224  Q
    |||||||||||| | | ||||||||  |||||||||||| ||||||||||||||||||    
T  30962872 caagaggctgtttccaggacttgaagtcgtgacctttcaatcacatgacaacaacttt 30962929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 42083802 - 42083858
Alignment:
Q  171 aggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||| | | |||||||| |||||||||||||||||| ||||||||| ||||||    
T  42083802 aggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaattttacc 42083858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 44781605 - 44781665
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||||| |||| | | |||||||| |||||| ||||||||||| ||||||||||||||||    
T  44781605 caagaggttgtttccaggacttgaacccgtgaactttcagtcacgtgacaacaactttacc 44781665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 228
Target Start/End: Complemental strand, 25250530 - 25250497
Alignment:
Q  195 gtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||| |||||||||||||||||||||||||    
T  25250530 gtgaccttccagtcacatgacaacaactttacca 25250497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 221
Target Start/End: Complemental strand, 31457192 - 31457155
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaac 221  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  31457192 gacttgaacccgtgacctttcagccacatgacaacaac 31457155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 35105959 - 35105902
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaacttt 224  Q
    ||||||| |||| | | |||||||| |||||||||||||| ||| |||||||||||||    
T  35105959 caagaggttgtttccaggacttgaacccgtgacctttcagccacgtgacaacaacttt 35105902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 8897880 - 8897924
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||| || |||||||||| | |||||||||||||||||||||||    
T  8897880 gacttcaacccgtgaccttgctgtcacatgacaacaactttacca 8897924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 227
Target Start/End: Original strand, 11001069 - 11001109
Alignment:
Q  187 ttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||| ||| ||||||||| |||||||||||||||||||||    
T  11001069 ttgaacccgcgacctttcaatcacatgacaacaactttacc 11001109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 22598173 - 22598133
Alignment:
Q  187 ttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||| |||||||||||||||||  ||||||||||||||||    
T  22598173 ttgaacccgtgacctttcagtcatgtgacaacaactttacc 22598133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 33867083 - 33867039
Alignment:
Q  64 ggcaacctggtgc-ctaaagcttttgcatacgcagggttcgggaa 107  Q
    ||||||| ||||| ||||||||| |||||||||||||||||||||    
T  33867083 ggcaacccggtgcactaaagcttctgcatacgcagggttcgggaa 33867039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 10147 - 10208
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||    
T  10147 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 10208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 20475 - 20536
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||    
T  20475 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 20536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 226
Target Start/End: Original strand, 10693126 - 10693229
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  |||||||||||| | | |||||||| |||||||||||||||||||||||||||    
T  10693126 tcccaccatttggtgtattgtacgcagccttaccct---cttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaaca 10693222  T
Q  220 actttac 226  Q
    |||||||    
T  10693223 actttac 10693229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 21172062 - 21172167
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  |||||||||||| | | |||||||| ||||||||||||||| |||||||||||    
T  21172062 tcccaccatttggtgtattgtacgcagccttaccct---gttttacacaagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaaca 21172158  T
Q  220 actttacca 228  Q
    |||||||||    
T  21172159 actttacca 21172167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 19426942 - 19427049
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||| |||||||||       |  |||||||||||| | | |||||||| |||||||||||| ||||||||||||||    
T  19426942 tcccaccatttggtgtattgtacgcagtcttaccctatttttt-acacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaaca 19427040  T
Q  220 actttacca 228  Q
    |||||||||    
T  19427041 actttacca 19427049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 32758297 - 32758236
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| | ||||||||||||||||||||||||||||||||||    
T  32758297 caagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttacca 32758236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 42495934 - 42495995
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| ||||||||||||||||| ||||||||||||||||||    
T  42495934 caagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaactttacca 42495995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 42798705 - 42798644
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||| ||||| | |||||||||| |||||||||| |||||||||||||||||||||||||    
T  42798705 caagagactgtttccaagacttgaacccgtgaccttccagtcacatgacaacaactttacca 42798644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 42805560 - 42805499
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| |||||||||| |||||||||||||||||||||||||    
T  42805560 caagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacca 42805499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 43557508 - 43557447
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| || |||||||||||||||||||||||||||||||||    
T  43557508 caagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttacca 43557447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 47077952 - 47078013
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||| ||||| | | |||||||| ||||||||||||||||||||||||||||||||||||    
T  47077952 caagagactgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 47078013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 40463913 - 40463853
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||| ||||| ||| |||||||| |||||||||| ||||||||||||||||||||||||    
T  40463913 caagagactgtttctatgacttgaacccgtgaccttacagtcacatgacaacaactttacc 40463853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 48735237 - 48735281
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  48735237 gacttgaacccgtgacctttcagtcacatgacaacaactttacca 48735281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 7193121 - 7193062
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttac 226  Q
    ||||||| |||| | | |||||||| ||||||||||||||||||||||||||||||||||    
T  7193121 caagaggttgtttcgaggacttgaacccgtgacctttcagtcacatgacaacaactttac 7193062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 120 - 227
Target Start/End: Complemental strand, 19265896 - 19265791
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  |||| ||||||  | |||||||||| |||||||||||||||||| ||||||||    
T  19265896 tcccaccatttggtgtattgtacgcagccttaccctctttttaca--caagcggctgtatccaagacttgaacccgtgacctttcagtcacgtgacaaca 19265799  T
Q  220 actttacc 227  Q
    ||||||||    
T  19265798 actttacc 19265791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 29907455 - 29907393
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatg--acaacaactttacc 227  Q
    |||||||||||| ||| |||||||| |||||||||||||||||||||  ||||||||||||||    
T  29907455 caagaggctgtttctaggacttgaacccgtgacctttcagtcacatgatacaacaactttacc 29907393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 42476891 - 42476848
Alignment:
Q  185 acttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  42476891 acttgaatccgtgaccttttagtcacatgacaacaactttacca 42476848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 2541118 - 2541180
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttc-agtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| |||||||||||| ||||||||||||||||||||||||    
T  2541118 caagaggctgtttccaggacttgaacccgtgacctttccagtcacatgacaacaactttacca 2541180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 11617687 - 11617748
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||| |||| | | |||||||| | ||||||||||||||||||||||||||||||||||    
T  11617687 caagaggttgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttacca 11617748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 27629670 - 27629609
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| |||||||||||| |||| ||||||||||||||||||    
T  27629670 caagaggctgtttccaggacttgaacccgtgacctttcggtcaaatgacaacaactttacca 27629609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 33872008 - 33872069
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||| |||| | | |||||||| ||| ||||||||||||||||||||||||||||||||    
T  33872008 caagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttacca 33872069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 175 - 227
Target Start/End: Original strand, 3469286 - 3469338
Alignment:
Q  175 tgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||| ||| ||||||| || |||||||||||||||||||||||||||||||||    
T  3469286 tgtttctaggacttgagtctgtgacctttcagtcacatgacaacaactttacc 3469338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 7794606 - 7794666
Alignment:
Q  168 aagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||||||| | | |||||||| |||||||||| ||||||||| |||||||||||||||    
T  7794606 aagaggctgtttccaggacttgaacccgtgaccttccagtcacataacaacaactttacca 7794666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 13805121 - 13805077
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||| |||| |||||||||||||||||||||||||||||||    
T  13805121 gacttgaacccgttacctttcagtcacatgacaacaactttacca 13805077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 28362244 - 28362304
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||| ||| ||| |||||||| | |||||||||||| ||||||||||||||||||||    
T  28362244 caagaggcagtttctaggacttgaacctgtgacctttcagccacatgacaacaactttacc 28362304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 221
Target Start/End: Original strand, 42391153 - 42391251
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  ||||| |||||| | | |||||||| |||||||||||||||||||||||||||    
T  42391153 tcccaccatttggtgtattgtacgcagccttaccct---gttttacacaagaagctgtttccaggacttgaacccgtgacctttcagtcacatgacaaca 42391249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 6736909 - 6736867
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttac 226  Q
    |||||||| |||||||||||||||| |||||||||||||||||    
T  6736909 gacttgaacccgtgacctttcagtcgcatgacaacaactttac 6736867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 14732924 - 14732982
Alignment:
Q  170 gaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||||| | | |||||||| || |||| ||||||||||||||||||||||||||||    
T  14732924 gaggctgtttccaggacttgaacccatgacttttcagtcacatgacaacaactttacca 14732982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 34626309 - 34626367
Alignment:
Q  170 gaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||||| | | |||||||||| ||| ||||||| ||||||||||||||||||||||    
T  34626309 gaggctgtttccaggacttgaatctgtggcctttcaatcacatgacaacaactttacca 34626367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 1424029 - 1424070
Alignment:
Q  187 ttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||||||| ||||||||| |||||||||||||||    
T  1424029 ttgaatccgtgaccttccagtcacataacaacaactttacca 1424070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 5180276 - 5180317
Alignment:
Q  187 ttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||| || |||||||||||||||||||||||||||||||||    
T  5180276 ttgaacccttgacctttcagtcacatgacaacaactttacca 5180317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 7644992 - 7644931
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| |||||||||||||||||| | ||||||| |||||||    
T  7644992 caagaggctgtttccaggacttgaacccgtgacctttcagtcacgttacaacaaatttacca 7644931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 18327070 - 18327009
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| |   |||||||| ||||||||||  ||||||||||||||||||||||||    
T  18327070 caagaggctgtttccgggacttgaacccgtgaccttcaagtcacatgacaacaactttacca 18327009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 28078237 - 28078286
Alignment:
Q  174 ctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactt 223  Q
    ||||| ||| |||||||| |||||||||| ||||||||||||||||||||    
T  28078237 ctgtttctaggacttgaacccgtgaccttacagtcacatgacaacaactt 28078286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 39123926 - 39123865
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||| | ||| ||| |||||||| ||||| | ||||||||||||||||||||||||||||    
T  39123926 caagagaccgtttctaggacttgaacccgtgtcgtttcagtcacatgacaacaactttacca 39123865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 46354230 - 46354169
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||| |||| | | |||||||| |||||||||| || ||||||||||||||||||||||    
T  46354230 caagaggttgtttccaggacttgaacccgtgaccttccaatcacatgacaacaactttacca 46354169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 47716495 - 47716438
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaacttt 224  Q
    |||||||||||| | | |||||||| |||||||||| |||||||||| ||||||||||    
T  47716495 caagaggctgtttccaggacttgaacccgtgaccttccagtcacatggcaacaacttt 47716438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 224
Target Start/End: Complemental strand, 11741877 - 11741774
Alignment:
Q  118 gatcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaa 217  Q
    |||||||| ||||||||||||||| ||||||||||||||       |  | ||| ||||||   | |||||||| || ||||||||||||||||||||||    
T  11741877 gatcccaccatttggtgtattgtacgcagccttacccta---ttttacactagaagctgttttcaggacttgaacccatgacctttcagtcacatgacaa 11741781  T
Q  218 caacttt 224  Q
    |||||||    
T  11741780 caacttt 11741774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 227
Target Start/End: Complemental strand, 19266534 - 19266426
Alignment:
Q  118 gatcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaa 217  Q
    |||||||| ||||||||||||||| |||||||||||||        | ||||| |||| ||   | |||||||| ||  |||||||||||||||||||||    
T  19266534 gatcccacaatttggtgtattgtacgcagccttaccct-gttttttacgcaagtggctattttcaggacttgaacccacgacctttcagtcacatgacaa 19266436  T
Q  218 caactttacc 227  Q
    ||||||||||    
T  19266435 caactttacc 19266426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 22699086 - 22699130
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||| || | |||||||||||||||||||||||||||||||    
T  22699086 gacttgaacccataacctttcagtcacatgacaacaactttacca 22699130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 35334930 - 35334974
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||||  ||||||||| |||||||||||||||||||||||||    
T  35334930 gacttgaactcgtgaccttccagtcacatgacaacaactttacca 35334974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 48123583 - 48123643
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||||||| | | |||||||| || ||||||||||| ||||||| ||||||||||||    
T  48123583 caagaggctgtttccaggacttgaacccatgacctttcagacacatgataacaactttacc 48123643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Original strand, 14099134 - 14099165
Alignment:
Q  196 tgacctttcagtcacatgacaacaactttacc 227  Q
    ||||||||||||||||||||||||||||||||    
T  14099134 tgacctttcagtcacatgacaacaactttacc 14099165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 227
Target Start/End: Original strand, 14409151 - 14409182
Alignment:
Q  196 tgacctttcagtcacatgacaacaactttacc 227  Q
    ||||||||||||||||||||||||||||||||    
T  14409151 tgacctttcagtcacatgacaacaactttacc 14409182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 29140477 - 29140520
Alignment:
Q  185 acttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||||  ||||||||||||| ||||||||||||||||||||    
T  29140477 acttgaatgtgtgacctttcagttacatgacaacaactttacca 29140520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 21447626 - 21447568
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaacttta 225  Q
    ||||||||||||   ||||||||||||||||||||| || | |||||||||||| ||||    
T  21447626 caagaggctgttttcaagacttgaatccgtgaccttccaattacatgacaacaaattta 21447568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 225
Target Start/End: Original strand, 28685257 - 28685291
Alignment:
Q  191 atccgtgacctttcagtcacatgacaacaacttta 225  Q
    |||||||| ||||||||||||||||||||||||||    
T  28685257 atccgtgatctttcagtcacatgacaacaacttta 28685291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 1524285 - 1524345
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||||||||||  |||||||||||   |||||||||||||| | ||||||| ||||||||    
T  1524285 caagaggctgtttataagacttgaacttgtgacctttcagtctcgtgacaaccactttacc 1524345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 2662988 - 2663024
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttacccta 156  Q
    |||||| ||||||||||||||| ||||||||||||||    
T  2662988 tcccaccatttggtgtattgtacgcagccttacccta 2663024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 16341314 - 16341254
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||||||| |||  ||||||| |||||||||||||   |||||| ||||||||||||    
T  16341314 caagaggctgtttctagaacttgaacccgtgacctttcaaatacatgataacaactttacc 16341254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 23419773 - 23419833
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||||||| | |  ||||||| | ||||||||| |||||||||||| ||||||||||    
T  23419773 caagaggctgtttccagaacttgaacctgtgaccttttagtcacatgacagcaactttacc 23419833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 44123720 - 44123780
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||||||| | |  ||||||| |||| | ||||||||||||||||| ||||||||||    
T  44123720 caagaggctgtttccagtacttgaacccgtaatctttcagtcacatgacaccaactttacc 44123780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 37024653 - 37024714
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||    
T  37024653 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 37024714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 38879617 - 38879556
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||    
T  38879617 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 38879556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 39301159 - 39301099
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||||| |||||| |||||||||| ||||||||||||||| |||||||||||||||||||    
T  39301159 caagaggttgttcccaagacttgaacccgtgacctttcagtaacatgacaacaactttacc 39301099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 41014400 - 41014294
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  |||||||||||| | | |||||||| |||||||||| ||||||||||||||||    
T  41014400 tcccaccatttggtgtattgtacgcagccttaccctgtttttaca--caagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaaca 41014303  T
Q  220 actttacca 228  Q
    |||||||||    
T  41014302 actttacca 41014294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 128 - 228
Target Start/End: Complemental strand, 43334277 - 43334177
Alignment:
Q  128 tttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||||||||| |||||||||||||        |  || ||||||||| | | |||||||| |||||||||||||||||||||||||||||||||||    
T  43334277 tttggtgtattgtacgcagccttaccctgtttttttacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 43334178  T
Q  228 a 228  Q
    |    
T  43334177 a 43334177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 22861765 - 22861823
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaacttta 225  Q
    |||||| ||| | ||| ||||||||||||||||||||||||||||||||||||||||||    
T  22861765 caagagactgcttctaggacttgaatccgtgacctttcagtcacatgacaacaacttta 22861823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 24448972 - 24448865
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| ||||||||||||||       |  ||| |||||||| | | |||||||| |||||||||| ||||||||||||||||    
T  24448972 tcccaccatttggtgtattgtacgcagccttaccctatttttt-acacaaaaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaaca 24448874  T
Q  220 actttacca 228  Q
    |||||||||    
T  24448873 actttacca 24448865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 35710393 - 35710288
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||| | ||||||||||||||       |  |||||||||||| | | |||||||| ||||||||||||||| |||||||||||    
T  35710393 tcccaccatttggtgtattgaacgcagccttaccctatttt---acacaagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaaca 35710297  T
Q  220 actttacca 228  Q
    |||||||||    
T  35710296 actttacca 35710288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 8170037 - 8170142
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  ||| |||||||| | | |||||||| |||||||||||| ||||||||||||||    
T  8170037 tcccaccatttggtgtattgtacgcagccttaccct---gttttacacaaaaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaaca 8170133  T
Q  220 actttacca 228  Q
    |||||||||    
T  8170134 actttacca 8170142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 1565467 - 1565406
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||| |||| | | |||||||| ||| ||||||||||||||||||||||||||||||||    
T  1565467 caagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaactttacca 1565406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 4619205 - 4619266
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||||| || | | |||||||| |||||||||| |||||||||||||||||||||||||    
T  4619205 caagaggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacca 4619266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 27328788 - 27328727
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||| ||||| | | |||||||| | ||||||||||||||||||||||||||||||||||    
T  27328788 caagagactgtttccaggacttgaacctgtgacctttcagtcacatgacaacaactttacca 27328727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Original strand, 39079880 - 39079925
Alignment:
Q  182 aagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||    
T  39079880 aagacttgaacccgtgacctttctgtcacatgacaacaactttacc 39079925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 23974816 - 23974756
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||||| |||| | | |||||||| |||||||||| ||||||||||||||||||||||||    
T  23974816 caagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacc 23974756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 28516533 - 28516593
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||||| |||| | |||||||||| |||||||||||||| ||| ||||||||||||||||    
T  28516533 caagaggatgtttccaagacttgaacccgtgacctttcagccacctgacaacaactttacc 28516593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 32703504 - 32703411
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgaca 216  Q
    |||||| ||||||||||||||| |||||||||||||        |  |||||||||||| | | |||||||| ||||||||||||||||||||||||    
T  32703504 tcccaccatttggtgtattgtacgcagccttaccct---gttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgaca 32703411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 227
Target Start/End: Complemental strand, 2838862 - 2838754
Alignment:
Q  118 gatcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgaccttt-cagtcacatgaca 216  Q
    |||||||| ||||||||||||||| |||||||||||||        |  ||||| |||||| || ||||||||   |||||||||| |||||||||||||    
T  2838862 gatcccaccatttggtgtattgtacgcagccttaccctgtttttaca--caagatgctgtttctgagacttgacctcgtgacctttacagtcacatgaca 2838765  T
Q  217 acaactttacc 227  Q
    |||||||||||    
T  2838764 acaactttacc 2838754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 118 - 155
Target Start/End: Original strand, 9794429 - 9794466
Alignment:
Q  118 gatcccactatttggtgtattgtatgcagccttaccct 155  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  9794429 gatcccactatttggtgtattgtatgcagtcttaccct 9794466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 31299668 - 31299607
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| ||| ||||||||   ||||||| | ||||||||||||||||||||||||    
T  31299668 caagaggctgtttctaggacttgaactagtgacctgtaagtcacatgacaacaactttacca 31299607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 219
Target Start/End: Complemental strand, 1850659 - 1850624
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||||| |||||||||||||||||||||||||||    
T  1850659 gacttgaacccgtgacctttcagtcacatgacaaca 1850624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 22187321 - 22187262
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttac 226  Q
    |||||||||||| | | ||||| || | ||||||||||||||| ||||||||||||||||    
T  22187321 caagaggctgtttccaggacttaaaccggtgacctttcagtcaaatgacaacaactttac 22187262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 223
Target Start/End: Original strand, 12006455 - 12006485
Alignment:
Q  193 ccgtgacctttcagtcacatgacaacaactt 223  Q
    |||||||||||||||||||||||||||||||    
T  12006455 ccgtgacctttcagtcacatgacaacaactt 12006485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 223
Target Start/End: Original strand, 10634248 - 10634301
Alignment:
Q  170 gaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactt 223  Q
    |||| |||| ||| |||||||| || ||||||||||||||| ||||||||||||    
T  10634248 gaggttgtttctaggacttgaacccatgacctttcagtcacttgacaacaactt 10634301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 225
Target Start/End: Original strand, 28208235 - 28208264
Alignment:
Q  196 tgacctttcagtcacatgacaacaacttta 225  Q
    ||||||||||||||||||||||||||||||    
T  28208235 tgacctttcagtcacatgacaacaacttta 28208264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 30006344 - 30006303
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaacttta 225  Q
    ||||||||||  ||||||||||||||||||||||||| ||||    
T  30006344 gacttgaatctatgacctttcagtcacatgacaacaaattta 30006303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 31362454 - 31362495
Alignment:
Q  187 ttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||| |||||||||| || ||||||||||||||||||||||    
T  31362454 ttgaacccgtgaccttccaatcacatgacaacaactttacca 31362495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 209054 - 209086
Alignment:
Q  195 gtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||||||| |||||||||||||||||||||||    
T  209054 gtgaccttttagtcacatgacaacaactttacc 209086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 22600473 - 22600429
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||| |||| ||||| ||||||||||| |||||||||||||    
T  22600473 gacttgaacccgtaaccttccagtcacatgataacaactttacca 22600429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 34074661 - 34074717
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactt 223  Q
    |||||||||||| ||| ||||||||   |||||||||||||||  ||||||||||||    
T  34074661 caagaggctgtttctaggacttgaacttgtgacctttcagtcatgtgacaacaactt 34074717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 2e-17; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 8247788 - 8247849
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||    
T  8247788 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 8247849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 10870050 - 10870111
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||    
T  10870050 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 10870111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 120 - 227
Target Start/End: Complemental strand, 22609869 - 22609764
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  |||||||||||| | |||||||||| |||| ||||| ||||||||||||||||    
T  22609869 tcccaccatttggtgtattgtacgcagccttaccctgtttttaca--caagaggctgtttccaagacttgaacccgttaccttacagtcacatgacaaca 22609772  T
Q  220 actttacc 227  Q
    ||||||||    
T  22609771 actttacc 22609764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 224
Target Start/End: Original strand, 13628891 - 13628948
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaacttt 224  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||    
T  13628891 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttt 13628948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 13730703 - 13730764
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| |||||||||| |||||||||||||||||||||||||    
T  13730703 caagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacca 13730764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 29366821 - 29366882
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| ||||||||||| ||||||||||||||||||||||||    
T  29366821 caagaggctgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttacca 29366882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 46421136 - 46421197
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| ||||||||||| ||||||||||||||||||||||||    
T  46421136 caagaggctgtttccaggacttgaacccgtgacctttaagtcacatgacaacaactttacca 46421197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 52926309 - 52926370
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| |||||||||| |||||||||||||||||||||||||    
T  52926309 caagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacca 52926370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 16735544 - 16735438
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  |||||||||||| | | |||||||| ||||||| || ||||||||||||||||    
T  16735544 tcccaccatttggtgtattgtacgcagccttaccctgtttttcta--caagaggctgtttcgaggacttgaacccgtgacgttacagtcacatgacaaca 16735447  T
Q  220 actttacca 228  Q
    |||||||||    
T  16735446 actttacca 16735438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 26869810 - 26869704
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  | |||||||||| | | |||||||| | |||||||||||||||||||||||||    
T  26869810 tcccaccatttggtgtattgtacgcagccttaccctgtttttaca--ccagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaaca 26869713  T
Q  220 actttacca 228  Q
    |||||||||    
T  26869712 actttacca 26869704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 34420743 - 34420802
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttac 226  Q
    |||||||||||| | | |||||||| |||||||||||||||||| |||||||||||||||    
T  34420743 caagaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttac 34420802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 39203574 - 39203515
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttac 226  Q
    |||||||||||| | | |||||||| | ||||||||||||||||||||||||||||||||    
T  39203574 caagaggctgtttcaaggacttgaacctgtgacctttcagtcacatgacaacaactttac 39203515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 227
Target Start/End: Original strand, 45620881 - 45620988
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| | ||||||||||||| |||||||||||||        |  |||||||||||| | |  ||||||| |||||||||||||||||| ||||||||    
T  45620881 tcccaccaattggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccagaacttgaacccgtgacctttcagtcacgtgacaaca 45620980  T
Q  220 actttacc 227  Q
    ||||||||    
T  45620981 actttacc 45620988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 1217148 - 1217087
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| ||||||||||||||| ||||||| ||||||||||||    
T  1217148 caagaggctgtttccaggacttgaacccgtgacctttcagtgacatgactacaactttacca 1217087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 224
Target Start/End: Original strand, 5173819 - 5173876
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaacttt 224  Q
    ||||||| |||| | | |||||||| ||||||||||||||||||||||||||||||||    
T  5173819 caagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttt 5173876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 7696984 - 7697045
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||| ||||| | | |||||||| ||||||||||| ||||||||||||||||||||||||    
T  7696984 caagagactgtttccaggacttgaacccgtgaccttttagtcacatgacaacaactttacca 7697045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 26573182 - 26573125
Alignment:
Q  170 gaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||||||| | | |||||||| |||||||||||||||||| ||||||||||||||||    
T  26573182 gaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 26573125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Complemental strand, 53062093 - 53062036
Alignment:
Q  170 gaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||||||| | | ||||||||  ||||||||||||||||||||||||||||||||||    
T  53062093 gaggctgtttccaggacttgaacacgtgacctttcagtcacatgacaacaactttacc 53062036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 4495780 - 4495824
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||| |||||||||| |||||||||||||||||||||||||    
T  4495780 gacttgaacccgtgaccttccagtcacatgacaacaactttacca 4495824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 9607262 - 9607202
Alignment:
Q  166 gcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttac 226  Q
    ||||||||||||| | | |||||||| |  |||||||||||||||||||||||||||||||    
T  9607262 gcaagaggctgtttccaggacttgaaccgatgacctttcagtcacatgacaacaactttac 9607202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 223
Target Start/End: Original strand, 30928246 - 30928302
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactt 223  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||| |||||    
T  30928246 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaagaactt 30928302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 222
Target Start/End: Complemental strand, 7943048 - 7942993
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaact 222  Q
    ||||| |||||| | | ||||||||||||||||||| |||||||||||||||||||    
T  7943048 caagatgctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaact 7942993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 22122970 - 22123075
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  |||||| ||||| | | |||||||| ||| |||||||||||||||||||||||    
T  22122970 tcccaccatttggtgtattgtacgcagccttaccct---gttttacacaagagactgtttccaggacttgaacccgcgacctttcagtcacatgacaaca 22123066  T
Q  220 actttacca 228  Q
    | |||||||    
T  22123067 aatttacca 22123075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 40272865 - 40272972
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  ||||||| |||| | | |||||||| || ||||||| ||||||||||||||||    
T  40272865 tcccaccatttggtgtattgtacgcagccttaccct-gttttttacacaagaggttgtttccaggacttgaacccatgaccttccagtcacatgacaaca 40272963  T
Q  220 actttacca 228  Q
    |||||||||    
T  40272964 actttacca 40272972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 217
Target Start/End: Complemental strand, 516467 - 516417
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaa 217  Q
    |||||||||||| | | |||||||| |||||||||||||||||||||||||    
T  516467 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaa 516417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 6411920 - 6411981
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||||||||   |||||||||| || |||||| ||||| ||||||||||||||||||||    
T  6411920 caagaggctgtttacaagacttgaacccatgacctatcagttacatgacaacaactttacca 6411981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 26782407 - 26782363
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||||||||||||| || |||||||| ||||||||||    
T  26782407 gacttgaatccgtgacctttcaatcgcatgacaataactttacca 26782363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 226
Target Start/End: Complemental strand, 25944510 - 25944468
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttac 226  Q
    |||||||| || ||||||||||||||| |||||||||||||||    
T  25944510 gacttgaacccatgacctttcagtcacgtgacaacaactttac 25944468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 12914134 - 12914195
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | ||||||||   |||||||||| ||||||| |||||||||||||||    
T  12914134 caagaggctgtttccaggacttgaacttgtgacctttcggtcacattacaacaactttacca 12914195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 228
Target Start/End: Original strand, 25517300 - 25517333
Alignment:
Q  195 gtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||| |||||||||||||||||||||||||    
T  25517300 gtgaccttccagtcacatgacaacaactttacca 25517333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 156
Target Start/End: Complemental strand, 31831294 - 31831265
Alignment:
Q  127 atttggtgtattgtatgcagccttacccta 156  Q
    ||||||||||||||||||||||||||||||    
T  31831294 atttggtgtattgtatgcagccttacccta 31831265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 155
Target Start/End: Original strand, 52428532 - 52428565
Alignment:
Q  122 ccactatttggtgtattgtatgcagccttaccct 155  Q
    |||||||||||||||||||| |||||||||||||    
T  52428532 ccactatttggtgtattgtacgcagccttaccct 52428565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 19731060 - 19731000
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||||||| || | | |||||| ||||||||||||||| |||| ||||||||| ||||||    
T  19731060 caagaggctatttccaggacttgcatccgtgacctttcaatcacgtgacaacaaatttacc 19731000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 31542451 - 31542411
Alignment:
Q  187 ttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||| |||||||||||| ||| |||||||||||||||||    
T  31542451 ttgaattcgtgacctttcaatcatatgacaacaactttacc 31542411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 35417974 - 35417914
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||||||| | | || |||||  |||||||| |||||||||||| ||||||||||||    
T  35417974 caagaggctgtttccaggatttgaactcgtgacctctcagtcacatgataacaactttacc 35417914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 45288059 - 45288111
Alignment:
Q  64 ggcaacctggtgc-ctaaagcttttgcatacgcagggttcgggaaaaggtccc 115  Q
    |||| |||||||| |||||||| ||||||||||||||| |||||| |||||||    
T  45288059 ggcagcctggtgcactaaagctcttgcatacgcagggtccgggaagaggtccc 45288111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 45948891 - 45948927
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttacccta 156  Q
    |||||| | ||||||||||||||||||||||||||||    
T  45948891 tcccaccaattggtgtattgtatgcagccttacccta 45948927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 53996665 - 53996725
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||||| |||| | | ||||||||  |||||||||||||||| |||||||||| ||||||    
T  53996665 caagaggttgtttccacgacttgaacacgtgacctttcagtcaaatgacaacaaatttacc 53996725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 34725195 - 34725256
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||||||||||||||    
T  34725195 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 34725256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 46248052 - 46248113
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | |||||||||| ||||||| ||||||||||||||||||||||||||||    
T  46248052 caagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaactttacca 46248113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 18724644 - 18724704
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||||||| | | |||||||| |||||||||||||||||||||||||||||||||||    
T  18724644 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacc 18724704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 32632610 - 32632716
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  |||||||||||| | | |||||||| ||||||||||||||||| |||||||||    
T  32632610 tcccaccatttggtgtattgtacgcagccttaccctgtttttaca--caagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaaca 32632707  T
Q  220 actttacca 228  Q
    |||||||||    
T  32632708 actttacca 32632716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 33223043 - 33222983
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||||||| | | ||||| ||||||||||||||||||||||||||||||||||||||    
T  33223043 caagaggctgtttccatgacttaaatccgtgacctttcagtcacatgacaacaactttacc 33222983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 38478379 - 38478438
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttac 226  Q
    |||||||||||| ||| |||||||| |||||||||||||||||||||||||||| |||||    
T  38478379 caagaggctgtttctaggacttgaacccgtgacctttcagtcacatgacaacaagtttac 38478438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 27201706 - 27201645
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| || |||||||||||||||||||||||||||||||||    
T  27201706 caagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttacca 27201645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 27474340 - 27474279
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||| ||||| | |||||||||| | ||||||||||||||||||||||||||||||||||    
T  27474340 caagagactgtttccaagacttgaacctgtgacctttcagtcacatgacaacaactttacca 27474279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 47214570 - 47214509
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||| ||||| | | |||||||| ||||||||||||||||||||||||||||||||||||    
T  47214570 caagagactgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttacca 47214509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 14617097 - 14617037
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||||||| | | ||||||||  ||||||||||||||||||||||||||||||||||    
T  14617097 caagaggctgtttccaggacttgaactcgtgacctttcagtcacatgacaacaactttacc 14617037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 19414497 - 19414437
Alignment:
Q  168 aagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||| || ||| |||||||| ||||||||||||||||| ||||||||||||||||||    
T  19414497 aagaggctctttctaggacttgaacccgtgacctttcagtcatatgacaacaactttacca 19414437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 20036262 - 20036218
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  20036262 gacttgaacccgtgacctttcagtcacatgacaacaactttacca 20036218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 169 - 228
Target Start/End: Original strand, 20004193 - 20004252
Alignment:
Q  169 agaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||| | | |||||||| |||||||||| |||||||||||||||||||||||||    
T  20004193 agaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacca 20004252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 23768373 - 23768480
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| ||||||||||||||| |||||||||||||        |  |||||||||||| | | |||||||| | |||||||| ||||||||||||||||    
T  23768373 tcccaccatttggtgtattgtacgcagccttaccct-gttttttacacaagaggctgtttccatgacttgaacctgtgaccttacagtcacatgacaaca 23768471  T
Q  220 actttacca 228  Q
    |||||||||    
T  23768472 actttacca 23768480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 168 - 227
Target Start/End: Complemental strand, 52910275 - 52910216
Alignment:
Q  168 aagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||||||||| | |||| ||||| | |||||||||||||||||||||||||||||||||    
T  52910275 aagaggctgtttccaagagttgaacctgtgacctttcagtcacatgacaacaactttacc 52910216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 227
Target Start/End: Original strand, 2435889 - 2435946
Alignment:
Q  170 gaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||||||| | | |||||||| |||||||||||||||||| ||||||||||||||||    
T  2435889 gaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 2435946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 6925159 - 6925098
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||||| || | | |||||||| |||||||||| |||||||||||||||||||||||||    
T  6925159 caagaggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacca 6925098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 18944702 - 18944641
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | | |||||| | ||||||||||||||||||||||||||||||||||    
T  18944702 caagaggctgtttccaggccttgaacctgtgacctttcagtcacatgacaacaactttacca 18944641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 228
Target Start/End: Original strand, 22930170 - 22930227
Alignment:
Q  171 aggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||| | | |||||||| || |||||||||||||||||||||||||||||||||    
T  22930170 aggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaactttacca 22930227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 25290207 - 25290162
Alignment:
Q  182 aagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||    
T  25290207 aagacttgaacacgtgacctttcagtcacatgacaacaactttacc 25290162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Original strand, 30395827 - 30395888
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| ||||||||||  ||||||||||||||||||||||||    
T  30395827 caagaggctgtttccaggacttgaacccgtgaccttaaagtcacatgacaacaactttacca 30395888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 46991863 - 46991802
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||| |||| | | |||||||| |||||||||| |||||||||||||||||||||||||    
T  46991863 caagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttacca 46991802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 8197085 - 8197041
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||    
T  8197085 gacttgaacccgtgacctttcagtcacatgacaacaacttgacca 8197041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 17470445 - 17470505
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||||||| ||| |||||||| || ||||| ||||||||| ||||||||||||||||    
T  17470445 caagaggctgtttctaggacttgaacccatgaccattcagtcacgtgacaacaactttacc 17470505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 34714665 - 34714621
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||    
T  34714665 gacttgaacccgtgacctttcaatcacatgacaacaactttacca 34714621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 35117867 - 35117927
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||||||| || | | |||||||| |||||||||||||||||| ||||||||||||||||    
T  35117867 caagaggctatttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttacc 35117927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 184 - 228
Target Start/End: Complemental strand, 40424784 - 40424740
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||    
T  40424784 gacttgaacccgtggcctttcagtcacatgacaacaactttacca 40424740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 225
Target Start/End: Original strand, 45812590 - 45812692
Alignment:
Q  120 tcccactatttggtgtattgtatgcagccttaccctannnnnnnaggcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaaca 219  Q
    |||||| |||||||||||||||||||||||||||||        |  |||||| |||||   | |||||||| | |||||||||||||||||||||||||    
T  45812590 tcccaccatttggtgtattgtatgcagccttaccct---cttttacacaagagactgttttcaggacttgaacctgtgacctttcagtcacatgacaaca 45812686  T
Q  220 acttta 225  Q
    ||||||    
T  45812687 acttta 45812692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 2436009 - 2436052
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||| |||||||||||||||||| ||||||||||||||||    
T  2436009 gacttgaacccgtgacctttcagtcacgtgacaacaactttacc 2436052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 18742070 - 18742121
Alignment:
Q  177 ttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||| |||| ||||| || |||||||||||||||||||||||||||||||||    
T  18742070 ttcccaagatttgaacccttgacctttcagtcacatgacaacaactttacca 18742121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 19932869 - 19932912
Alignment:
Q  185 acttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  19932869 acttgaacccatgacctttcagtcacatgacaacaactttacca 19932912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 4430140 - 4430186
Alignment:
Q  182 aagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||| || |||||||||| |||||||||||||||||||||||||    
T  4430140 aagacttaaacccgtgaccttccagtcacatgacaacaactttacca 4430186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 6983911 - 6983969
Alignment:
Q  170 gaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||||| | | |||||||| | |||||||||||||||| |||||||||||||||||    
T  6983911 gaggctgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaactttacca 6983969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 9939520 - 9939463
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaacttt 224  Q
    ||||||| |||| | | ||||||||  |||||||||||||||||||||||||||||||    
T  9939520 caagaggttgtttccaggacttgaactcgtgacctttcagtcacatgacaacaacttt 9939463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 224
Target Start/End: Complemental strand, 22327158 - 22327101
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaacttt 224  Q
    ||||||| |||| | | |||||||| ||| ||||||||||||||||||||||||||||    
T  22327158 caagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaacttt 22327101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 228
Target Start/End: Original strand, 41319933 - 41319966
Alignment:
Q  195 gtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||||||||||||||||||||||||||||||    
T  41319933 gtgacctttcagtcacatgacaacaactttacca 41319966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 11596572 - 11596512
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||||| |||| ||| |||||||| ||||||| |||||||||||||||| | ||||||||    
T  11596572 caagaggttgtttctaggacttgaacccgtgacatttcagtcacatgacagccactttacc 11596512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 227
Target Start/End: Original strand, 50760325 - 50760385
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||||||||||   | |||||||| ||||||||| |||||||||||||||| ||||||||    
T  50760325 caagaggctgttttcaggacttgaacccgtgacctctcagtcacatgacaactactttacc 50760385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 227
Target Start/End: Complemental strand, 50811998 - 50811938
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||| |||||| | | ||| ||| ||||||||||||||||||| ||||||||||||||||    
T  50811998 caagaagctgtttccaggacatgattccgtgacctttcagtcacgtgacaacaactttacc 50811938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 227
Target Start/End: Original strand, 10378841 - 10378884
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||| |||| ||||||||||||| ||||||||||||||||    
T  10378841 gacttgaacccgtaacctttcagtcacgtgacaacaactttacc 10378884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 226
Target Start/End: Original strand, 25468362 - 25468421
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttac 226  Q
    ||||||| |||| | | |||||||| || |||||||||| ||||||||||||||||||||    
T  25468362 caagaggttgtttccaggacttgaacccatgacctttcaatcacatgacaacaactttac 25468421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 184 - 227
Target Start/End: Complemental strand, 35019272 - 35019229
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    |||||||||| |||||||||||||||  ||||||||||||||||    
T  35019272 gacttgaatctgtgacctttcagtcatgtgacaacaactttacc 35019229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 10668284 - 10668218
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtc-----acatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| ||||||||||||||||     ||||||||||||||||||||    
T  10668284 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatcacatgacaacaactttacca 10668218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 226
Target Start/End: Original strand, 44485234 - 44485267
Alignment:
Q  193 ccgtgacctttcagtcacatgacaacaactttac 226  Q
    ||||||||||||| ||||||||||||||||||||    
T  44485234 ccgtgacctttcaatcacatgacaacaactttac 44485267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 45402153 - 45402093
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| |||| ||||| || ||||||||||||||||||||||    
T  45402153 caagaggctgtttccaggacttgaacccgttaccttcca-tcacatgacaacaactttacca 45402093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 166 - 227
Target Start/End: Original strand, 13121 - 13182
Alignment:
Q  166 gcaagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacc 227  Q
    ||||||||||||| | | |||||||| | |||||||||||||||||||||||||||||||||    
T  13121 gcaagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttacc 13182  T

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Target: scaffold0168 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 30615 - 30554
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| | ||||||||||||||||||||||||||||||||||    
T  30615 caagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaactttacca 30554  T

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Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 226
Target Start/End: Complemental strand, 83896 - 83852
Alignment:
Q  182 aagacttgaatccgtgacctttcagtcacatgacaacaactttac 226  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  83896 aagacttgaacccgtgacctttcagtcacatgacaacaactttac 83852  T

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Target: scaffold0049 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 59013 - 58952
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| ||||||||||||||||||||||||| || |||||||    
T  59013 caagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaataagtttacca 58952  T

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Target: scaffold1176 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 1701 - 1745
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||| || |||||||||||||||||||||||||||||||||    
T  1701 gacttgaacccatgacctttcagtcacatgacaacaactttacca 1745  T

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Target: scaffold0057 (Bit Score: 37; Significance: 0.000000000005; HSPs: 3)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 184 - 228
Target Start/End: Original strand, 24883 - 24927
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||| || |||||||||||||||||||||||||||||||||    
T  24883 gacttgaacccatgacctttcagtcacatgacaacaactttacca 24927  T

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Target: scaffold0057; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 46849 - 46806
Alignment:
Q  185 acttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    ||||||| ||||||||||  ||||||||||||||||||||||||    
T  46849 acttgaacccgtgaccttctagtcacatgacaacaactttacca 46806  T

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Target: scaffold0057; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 226
Target Start/End: Original strand, 46999 - 47041
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaactttac 226  Q
    ||||||||  ||||||||||||||||| |||||||||||||||    
T  46999 gacttgaactcgtgacctttcagtcacctgacaacaactttac 47041  T

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Target: scaffold0254 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 4193 - 4134
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttac 226  Q
    ||||||| |||| | | |||||||| |||||||||||||||||||| |||||||||||||    
T  4193 caagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaactttac 4134  T

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Target: scaffold0311 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 186 - 228
Target Start/End: Complemental strand, 10827 - 10785
Alignment:
Q  186 cttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||| |||||||||| |||||||||||||||||||||||||    
T  10827 cttgaacccgtgaccttccagtcacatgacaacaactttacca 10785  T

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Target: scaffold0223 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 11167 - 11107
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| | | |||||||| |||||||||||||||||||| | |||||||||||||    
T  11167 caagaggctgtttccaggacttgaacccgtgacctttcagtcacat-agaacaactttacca 11107  T

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Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 228
Target Start/End: Complemental strand, 43165 - 43104
Alignment:
Q  167 caagaggctgttcctaagacttgaatccgtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||||||| ||| ||| ||||  |||||||||||| ||||||||||| ||||||||||    
T  43165 caagaggctgtttctaggacctgaactcgtgacctttcaatcacatgacaataactttacca 43104  T

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Target: scaffold0194 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 225
Target Start/End: Complemental strand, 24683 - 24642
Alignment:
Q  184 gacttgaatccgtgacctttcagtcacatgacaacaacttta 225  Q
    |||||||| |||||||||| ||||||| ||||||||||||||    
T  24683 gacttgaacccgtgaccttacagtcacttgacaacaacttta 24642  T

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Target: scaffold0116 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 228
Target Start/End: Complemental strand, 8899 - 8866
Alignment:
Q  195 gtgacctttcagtcacatgacaacaactttacca 228  Q
    |||||||| |||||||||||||||||||||||||    
T  8899 gtgaccttacagtcacatgacaacaactttacca 8866  T

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