View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13875_high_3 (Length: 311)
Name: NF13875_high_3
Description: NF13875
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13875_high_3 |
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Alignment Details
Target: chr4 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 100 - 295
Target Start/End: Original strand, 32604874 - 32605069
Alignment:
| Q |
100 |
tcaattgtcacgtcgacgtcgttcttctcttcttgttccttctcgactgctcatgttgtttctctcttattgtcctttcgtgctcgtattcgtatccata |
199 |
Q |
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| T |
32604874 |
tcaattgtcacgtcgacgtcgttcttctcttcttgttcctactcgactgctcatgttgtttctctcttattgtcctttcgtgctcgtatttgtatccata |
32604973 |
T |
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| Q |
200 |
tatatgattatttcatttgagctttctattgaaccaaagaaaaccaacacaatcttaatttttaaacaccacgagagtaaaattctaacatgtata |
295 |
Q |
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| T |
32604974 |
tatatgattatttcatttgagctttctattgaactaaagaaaaccaacacaatcttaatttttaaacaccacgagagtaaaattctaacatgtata |
32605069 |
T |
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