View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13878_high_15 (Length: 366)

Name: NF13878_high_15
Description: NF13878
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13878_high_15
NF13878_high_15
[»] scaffold0419 (2 HSPs)
scaffold0419 (114-259)||(3032-3179)
scaffold0419 (40-81)||(2969-3011)
[»] chr1 (40 HSPs)
chr1 (114-259)||(48471935-48472082)
chr1 (114-259)||(4059594-4059741)
chr1 (114-259)||(19077997-19078144)
chr1 (114-259)||(19125887-19126034)
chr1 (114-259)||(24196346-24196493)
chr1 (115-259)||(27092924-27093070)
chr1 (114-259)||(3616884-3617031)
chr1 (114-232)||(24962038-24962157)
chr1 (114-259)||(43706726-43706872)
chr1 (114-259)||(46432288-46432435)
chr1 (113-230)||(26605379-26605495)
chr1 (114-270)||(24749883-24750041)
chr1 (114-248)||(4455125-4455262)
chr1 (109-252)||(47685181-47685326)
chr1 (114-264)||(29182067-29182219)
chr1 (114-259)||(29676164-29676311)
chr1 (114-259)||(28920728-28920870)
chr1 (114-259)||(16551715-16551863)
chr1 (114-259)||(2425309-2425456)
chr1 (183-249)||(9554283-9554350)
chr1 (114-251)||(51719202-51719340)
chr1 (40-81)||(4059530-4059572)
chr1 (32-81)||(24196515-24196565)
chr1 (40-81)||(48471871-48471913)
chr1 (37-81)||(43706659-43706704)
chr1 (184-232)||(16858487-16858535)
chr1 (32-81)||(2425477-2425527)
chr1 (32-81)||(3616799-3616849)
chr1 (32-81)||(24196261-24196311)
chr1 (32-81)||(24750023-24750073)
chr1 (32-81)||(27092853-27092903)
chr1 (32-81)||(28920905-28920955)
chr1 (40-81)||(46432224-46432266)
chr1 (32-81)||(51719123-51719173)
chr1 (37-89)||(4455047-4455100)
chr1 (40-80)||(28552313-28552354)
chr1 (140-248)||(31084695-31084804)
chr1 (32-81)||(50334818-50334867)
chr1 (37-80)||(16878940-16878984)
chr1 (42-81)||(46432470-46432510)
[»] chr8 (33 HSPs)
chr8 (114-259)||(19391459-19391606)
chr8 (114-259)||(5192343-5192490)
chr8 (114-259)||(12723333-12723480)
chr8 (109-259)||(1824685-1824836)
chr8 (109-259)||(1859130-1859281)
chr8 (114-240)||(4518958-4519086)
chr8 (117-259)||(22452245-22452389)
chr8 (114-259)||(8802472-8802618)
chr8 (114-259)||(38630140-38630287)
chr8 (110-259)||(21666346-21666497)
chr8 (114-259)||(30784337-30784483)
chr8 (109-257)||(18252960-18253110)
chr8 (114-257)||(17648328-17648473)
chr8 (114-259)||(33895459-33895605)
chr8 (109-259)||(7117186-7117339)
chr8 (114-232)||(4807700-4807819)
chr8 (114-232)||(19924350-19924469)
chr8 (174-259)||(23565235-23565321)
chr8 (32-80)||(19391388-19391436)
chr8 (114-249)||(3208065-3208202)
chr8 (110-259)||(31268360-31268511)
chr8 (114-251)||(32400402-32400541)
chr8 (114-243)||(44147056-44147186)
chr8 (32-81)||(4807600-4807650)
chr8 (185-257)||(17813010-17813083)
chr8 (32-81)||(5192272-5192322)
chr8 (174-259)||(18881575-18881661)
chr8 (32-81)||(19392820-19392870)
chr8 (32-89)||(30784510-30784568)
chr8 (40-81)||(44147224-44147266)
chr8 (37-81)||(12723515-12723560)
chr8 (110-193)||(3380279-3380363)
chr8 (32-79)||(21930057-21930105)
[»] chr5 (38 HSPs)
chr5 (114-259)||(16901069-16901216)
chr5 (114-259)||(25556947-25557094)
chr5 (114-259)||(18695088-18695235)
chr5 (113-264)||(17825564-17825717)
chr5 (114-259)||(245679-245826)
chr5 (114-259)||(26639109-26639256)
chr5 (114-232)||(23765492-23765609)
chr5 (114-232)||(23815340-23815457)
chr5 (114-251)||(10379367-10379505)
chr5 (115-259)||(40428711-40428857)
chr5 (109-264)||(41663590-41663748)
chr5 (114-257)||(10293161-10293306)
chr5 (114-259)||(31055386-31055533)
chr5 (109-228)||(7187269-7187388)
chr5 (114-249)||(7835795-7835931)
chr5 (114-259)||(36641228-36641375)
chr5 (111-248)||(17704670-17704808)
chr5 (114-259)||(16307548-16307696)
chr5 (114-251)||(38408714-38408852)
chr5 (117-259)||(38476542-38476686)
chr5 (32-81)||(31648238-31648288)
chr5 (32-81)||(25556877-25556926)
chr5 (125-259)||(2373241-2373377)
chr5 (32-79)||(16900997-16901045)
chr5 (113-257)||(462850-462996)
chr5 (32-81)||(23765420-23765470)
chr5 (32-81)||(23815268-23815318)
chr5 (114-249)||(15885247-15885383)
chr5 (40-80)||(40428647-40428688)
chr5 (113-161)||(20653904-20653952)
chr5 (32-89)||(7835954-7836012)
chr5 (40-81)||(8646003-8646045)
chr5 (40-81)||(18695256-18695298)
chr5 (32-81)||(20654048-20654098)
chr5 (32-81)||(31055315-31055365)
chr5 (32-80)||(31576493-31576542)
chr5 (40-79)||(26639045-26639085)
chr5 (32-79)||(40428893-40428941)
[»] chr4 (43 HSPs)
chr4 (114-259)||(43793703-43793850)
chr4 (114-257)||(15058892-15059037)
chr4 (114-259)||(13397747-13397894)
chr4 (114-259)||(13826491-13826638)
chr4 (109-259)||(35475369-35475521)
chr4 (114-259)||(27018299-27018446)
chr4 (119-232)||(2715817-2715930)
chr4 (114-210)||(1588535-1588631)
chr4 (114-259)||(5304419-5304566)
chr4 (125-232)||(52838324-52838431)
chr4 (114-259)||(25011820-25011967)
chr4 (114-200)||(9195796-9195882)
chr4 (125-249)||(15795413-15795539)
chr4 (120-231)||(41034727-41034839)
chr4 (113-248)||(51291252-51291390)
chr4 (114-200)||(55780472-55780558)
chr4 (114-200)||(55844652-55844738)
chr4 (117-232)||(4357340-4357456)
chr4 (114-259)||(19232415-19232563)
chr4 (114-259)||(6789030-6789177)
chr4 (114-252)||(4098741-4098882)
chr4 (183-259)||(36729160-36729237)
chr4 (114-259)||(41877100-41877245)
chr4 (114-200)||(4433315-4433402)
chr4 (32-81)||(4433183-4433233)
chr4 (32-81)||(43793631-43793681)
chr4 (32-81)||(4433436-4433485)
chr4 (111-257)||(9397273-9397421)
chr4 (32-80)||(20919335-20919384)
chr4 (185-248)||(20919417-20919481)
chr4 (32-82)||(41877277-41877328)
chr4 (174-259)||(14804465-14804551)
chr4 (51-81)||(15058840-15058870)
chr4 (32-81)||(25011735-25011785)
chr4 (32-81)||(25011988-25012038)
chr4 (174-251)||(25618708-25618785)
chr4 (40-81)||(6979314-6979355)
chr4 (37-79)||(27018470-27018514)
chr4 (32-80)||(35475543-35475592)
chr4 (40-79)||(4357507-4357547)
chr4 (32-79)||(5304601-5304649)
chr4 (40-79)||(13826428-13826468)
chr4 (32-79)||(24626222-24626270)
[»] chr3 (60 HSPs)
chr3 (114-259)||(26628097-26628244)
chr3 (109-257)||(26633433-26633582)
chr3 (114-259)||(8339012-8339159)
chr3 (114-259)||(28154954-28155101)
chr3 (114-259)||(48907364-48907511)
chr3 (109-248)||(3780959-3781099)
chr3 (114-259)||(10743493-10743639)
chr3 (116-259)||(3328885-3329030)
chr3 (117-259)||(13080982-13081126)
chr3 (114-259)||(4522039-4522186)
chr3 (114-243)||(8542695-8542826)
chr3 (114-259)||(23428691-23428838)
chr3 (114-259)||(25022735-25022882)
chr3 (114-259)||(30155217-30155364)
chr3 (114-252)||(25179663-25179801)
chr3 (109-248)||(26177039-26177180)
chr3 (114-252)||(22500674-22500814)
chr3 (109-247)||(26126990-26127130)
chr3 (111-264)||(23320443-23320597)
chr3 (114-259)||(27852824-27852970)
chr3 (114-259)||(28173801-28173948)
chr3 (109-261)||(40836248-40836403)
chr3 (174-273)||(20626780-20626880)
chr3 (174-259)||(32960715-32960800)
chr3 (116-259)||(34878601-34878746)
chr3 (114-259)||(46673119-46673266)
chr3 (154-252)||(6927596-6927695)
chr3 (174-240)||(43668574-43668641)
chr3 (174-259)||(22416480-22416566)
chr3 (32-81)||(20001962-20002011)
chr3 (128-259)||(31039049-31039182)
chr3 (173-248)||(3821027-3821103)
chr3 (114-209)||(48860787-48860883)
chr3 (32-79)||(26633361-26633408)
chr3 (115-259)||(33279657-33279803)
chr3 (32-81)||(22447740-22447790)
chr3 (114-232)||(22447840-22447963)
chr3 (32-81)||(34878529-34878579)
chr3 (40-79)||(8338948-8338988)
chr3 (32-82)||(13080894-13080945)
chr3 (114-259)||(20001794-20001941)
chr3 (32-81)||(3328813-3328863)
chr3 (32-81)||(3329067-3329117)
chr3 (44-81)||(13081148-13081186)
chr3 (32-81)||(22500596-22500646)
chr3 (40-81)||(25179829-25179871)
chr3 (32-89)||(25336358-25336416)
chr3 (32-81)||(26628025-26628075)
chr3 (32-81)||(28154882-28154932)
chr3 (40-81)||(28173737-28173779)
chr3 (32-81)||(32960645-32960695)
chr3 (32-81)||(36311152-36311202)
chr3 (32-81)||(48907545-48907595)
chr3 (32-80)||(1743504-1743553)
chr3 (214-250)||(32315105-32315142)
chr3 (110-163)||(33105022-33105075)
chr3 (183-259)||(36311306-36311383)
chr3 (37-78)||(49657770-49657811)
chr3 (43-79)||(10743663-10743699)
chr3 (183-258)||(25336511-25336587)
[»] chr2 (34 HSPs)
chr2 (114-259)||(38716278-38716425)
chr2 (114-259)||(30714346-30714493)
chr2 (114-251)||(11175992-11176131)
chr2 (114-259)||(15735149-15735296)
chr2 (114-259)||(2986771-2986918)
chr2 (114-259)||(9051100-9051246)
chr2 (114-259)||(9787644-9787791)
chr2 (113-257)||(22387141-22387288)
chr2 (114-259)||(25298873-25299020)
chr2 (114-259)||(15700832-15700979)
chr2 (114-243)||(6763805-6763936)
chr2 (114-259)||(18537900-18538047)
chr2 (127-259)||(17368314-17368448)
chr2 (114-259)||(22191131-22191277)
chr2 (114-200)||(4587946-4588033)
chr2 (174-259)||(4104896-4104982)
chr2 (117-259)||(28365598-28365742)
chr2 (109-248)||(36464352-36464493)
chr2 (37-79)||(36464527-36464570)
chr2 (112-200)||(331795-331885)
chr2 (32-81)||(11175907-11175957)
chr2 (32-81)||(18538082-18538132)
chr2 (40-81)||(25298809-25298851)
chr2 (40-81)||(30714283-30714325)
chr2 (183-252)||(12350164-12350236)
chr2 (32-80)||(15735064-15735113)
chr2 (32-80)||(18537829-18537878)
chr2 (39-80)||(28365765-28365806)
chr2 (42-81)||(4587870-4587910)
chr2 (40-79)||(11176163-11176203)
chr2 (40-79)||(15701002-15701042)
chr2 (42-81)||(17368468-17368508)
chr2 (37-80)||(22191300-22191344)
chr2 (32-79)||(38716448-38716496)
[»] scaffold0025 (2 HSPs)
scaffold0025 (114-259)||(19368-19514)
scaffold0025 (114-259)||(61899-62048)
[»] chr7 (64 HSPs)
chr7 (114-259)||(19195285-19195432)
chr7 (114-259)||(21224424-21224571)
chr7 (114-259)||(48176035-48176181)
chr7 (114-243)||(24597603-24597734)
chr7 (114-259)||(36746575-36746722)
chr7 (114-259)||(13577858-13578004)
chr7 (114-257)||(2331098-2331243)
chr7 (114-243)||(27869283-27869414)
chr7 (114-259)||(31493995-31494142)
chr7 (113-260)||(44077941-44078091)
chr7 (106-257)||(14624680-14624832)
chr7 (114-251)||(17305849-17305989)
chr7 (114-232)||(3562533-3562652)
chr7 (114-243)||(20636704-20636835)
chr7 (114-232)||(35337622-35337741)
chr7 (114-259)||(42271417-42271564)
chr7 (183-252)||(6650665-6650735)
chr7 (114-259)||(11843250-11843396)
chr7 (183-264)||(15681785-15681867)
chr7 (116-259)||(4193637-4193782)
chr7 (113-259)||(26385345-26385493)
chr7 (114-259)||(41452321-41452468)
chr7 (174-259)||(5087142-5087228)
chr7 (111-273)||(3769486-3769650)
chr7 (114-270)||(21225610-21225766)
chr7 (109-259)||(39182015-39182166)
chr7 (114-243)||(8526881-8527011)
chr7 (114-259)||(10655415-10655561)
chr7 (109-259)||(24464655-24464808)
chr7 (114-259)||(10023857-10024003)
chr7 (114-200)||(18754398-18754485)
chr7 (110-243)||(19919691-19919825)
chr7 (114-200)||(20638576-20638663)
chr7 (183-264)||(3403118-3403200)
chr7 (32-82)||(11843178-11843229)
chr7 (40-81)||(3562441-3562483)
chr7 (32-78)||(10655586-10655632)
chr7 (183-259)||(7365378-7365455)
chr7 (32-81)||(36746757-36746806)
chr7 (109-212)||(5111519-5111623)
chr7 (184-259)||(5348184-5348260)
chr7 (109-259)||(19493399-19493550)
chr7 (40-79)||(20636874-20636914)
chr7 (32-80)||(21224354-21224402)
chr7 (40-79)||(27869204-27869244)
chr7 (111-201)||(26126336-26126427)
chr7 (40-81)||(8527048-8527090)
chr7 (183-252)||(9822179-9822248)
chr7 (183-252)||(10724104-10724173)
chr7 (32-81)||(15681884-15681934)
chr7 (40-81)||(24597525-24597567)
chr7 (32-81)||(31494164-31494214)
chr7 (109-143)||(33237604-33237638)
chr7 (184-230)||(46267348-46267394)
chr7 (32-80)||(2331273-2331322)
chr7 (37-81)||(13577792-13577837)
chr7 (109-150)||(25002787-25002828)
chr7 (45-81)||(17306019-17306055)
chr7 (37-80)||(18754521-18754565)
chr7 (32-79)||(19919857-19919905)
chr7 (32-79)||(21224608-21224656)
chr7 (114-232)||(21264156-21264276)
chr7 (37-80)||(27869450-27869494)
chr7 (184-251)||(33237493-33237561)
[»] chr6 (39 HSPs)
chr6 (114-259)||(24051093-24051240)
chr6 (114-257)||(22269492-22269636)
chr6 (125-259)||(32451822-32451958)
chr6 (114-259)||(35102563-35102710)
chr6 (114-240)||(15298570-15298697)
chr6 (114-228)||(4597509-4597624)
chr6 (114-259)||(18791442-18791589)
chr6 (114-243)||(34834010-34834141)
chr6 (114-257)||(24603446-24603591)
chr6 (114-264)||(3118764-3118916)
chr6 (109-259)||(24615765-24615917)
chr6 (114-259)||(14572250-14572397)
chr6 (114-232)||(26710407-26710526)
chr6 (114-259)||(31210879-31211026)
chr6 (114-259)||(22968228-22968373)
chr6 (114-259)||(23820020-23820165)
chr6 (114-232)||(25819769-25819888)
chr6 (114-222)||(8412843-8412952)
chr6 (174-248)||(20863811-20863886)
chr6 (112-259)||(4370981-4371124)
chr6 (183-259)||(34528303-34528380)
chr6 (174-247)||(23124804-23124878)
chr6 (37-81)||(4013919-4013964)
chr6 (40-80)||(4597413-4597454)
chr6 (144-259)||(18749168-18749284)
chr6 (40-79)||(14194456-14194495)
chr6 (40-78)||(35102499-35102538)
chr6 (40-81)||(15298738-15298780)
chr6 (32-81)||(18749097-18749147)
chr6 (32-81)||(24051009-24051059)
chr6 (32-81)||(26710561-26710611)
chr6 (32-81)||(35102717-35102767)
chr6 (37-81)||(14572183-14572228)
chr6 (40-76)||(32682381-32682418)
chr6 (32-79)||(18749384-18749432)
chr6 (40-81)||(18791611-18791654)
chr6 (42-81)||(22968407-22968447)
chr6 (42-81)||(23819946-23819986)
chr6 (32-79)||(32451982-32452030)
[»] scaffold0607 (2 HSPs)
scaffold0607 (114-259)||(2121-2268)
scaffold0607 (32-81)||(2048-2098)
[»] scaffold0179 (2 HSPs)
scaffold0179 (114-243)||(5738-5868)
scaffold0179 (32-81)||(5650-5700)
[»] scaffold0001 (2 HSPs)
scaffold0001 (114-259)||(142019-142166)
scaffold0001 (32-89)||(141945-142003)
[»] scaffold0174 (1 HSPs)
scaffold0174 (109-270)||(29796-29959)
[»] scaffold0087 (1 HSPs)
scaffold0087 (114-259)||(25036-25183)
[»] scaffold0062 (4 HSPs)
scaffold0062 (114-259)||(49744-49891)
scaffold0062 (114-259)||(62283-62430)
scaffold0062 (40-79)||(49914-49954)
scaffold0062 (40-79)||(62453-62493)
[»] scaffold0267 (1 HSPs)
scaffold0267 (109-249)||(3650-3792)
[»] scaffold0291 (1 HSPs)
scaffold0291 (113-251)||(10005-10145)
[»] scaffold0406 (1 HSPs)
scaffold0406 (118-259)||(2080-2223)
[»] scaffold0150 (1 HSPs)
scaffold0150 (114-259)||(5916-6063)
[»] scaffold0024 (1 HSPs)
scaffold0024 (110-245)||(43910-44047)
[»] scaffold0002 (3 HSPs)
scaffold0002 (110-252)||(455107-455252)
scaffold0002 (110-143)||(455011-455044)
scaffold0002 (37-81)||(455282-455327)
[»] scaffold0060 (2 HSPs)
scaffold0060 (114-259)||(66259-66406)
scaffold0060 (32-81)||(66427-66477)
[»] scaffold1875 (1 HSPs)
scaffold1875 (174-259)||(828-914)
[»] scaffold1202 (1 HSPs)
scaffold1202 (114-200)||(1906-1993)
[»] scaffold0014 (1 HSPs)
scaffold0014 (183-248)||(112282-112348)
[»] scaffold0007 (1 HSPs)
scaffold0007 (154-232)||(250618-250696)
[»] scaffold0171 (1 HSPs)
scaffold0171 (174-264)||(9178-9270)
[»] scaffold0064 (1 HSPs)
scaffold0064 (174-232)||(54516-54573)
[»] scaffold0005 (1 HSPs)
scaffold0005 (174-259)||(35176-35262)


Alignment Details
Target: scaffold0419 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 3179 - 3032
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||||| ||||| || |||| ||||||||||||||| ||||||| ||||||||||    
T  3179 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgacctcttatctttacaaaaagttgcaattatggcctcttttttg 3080  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||||||| ||| |||| ||||||    
T  3079 ggacacgtggcgtcttctcatcaattttgggatgaagggggccaaaat 3032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 2969 - 3011
Alignment:
Q  40 tgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  2969 tgcacttttcgccccctatgtttcaaaatgttgcgattttggc 3011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 1e-32; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 48472082 - 48471935
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| |||||||||| | ||||| |  |||| ||||||||||||||||||||||||| ||||||||    
T  48472082 atgtttagggaaatatgctcttttgacctcctaacataagagaaatatgctttttgaccccttatctttacaaaaagttgcgattatggtcccttttttg 48471983  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||||||| ||| |||| ||||||    
T  48471982 ggacacgtggcgtcttctcagcaattttgggatgaagggggccaaaat 48471935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 4059741 - 4059594
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| |  ||||||||| ||||| |  |||| |||||||||||||||||||||||||  |||||||    
T  4059741 atgtttagggaaatatgctcttttgacctcctaacataaggaaaatatgttttttgaccccttatctttacaaaaagttgcgattatggtccattttttg 4059642  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||||||| |||||||| ||||||    
T  4059641 ggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaat 4059594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 19078144 - 19077997
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||||| ||||| |  |||| ||||||||||||||||||||||  | ||||||||    
T  19078144 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttttg 19078045  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||| ||| |||||||| ||||||    
T  19078044 ggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaat 19077997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 19126034 - 19125887
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||||| ||||| |  |||| ||||||||||||||||||||||  | ||||||||    
T  19126034 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttttg 19125935  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||| ||| |||||||| ||||||    
T  19125934 ggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaat 19125887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 24196346 - 24196493
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||| | ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||| ||||| | ||||||||    
T  24196346 atgtttagagaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgaatatggccccttttttg 24196445  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||| |||||||||||| ||||||    
T  24196446 ggacacgtggcgtcttctcagcaatttttggacgaaaggggccaaaat 24196493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 115 - 259
Target Start/End: Complemental strand, 27093070 - 27092924
Alignment:
Q  115 tgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttga 213  Q
    ||||||||| ||||||||||||| ||||| ||| ||||| |||||||||| ||||| |  |||| ||||||||||||||| ||||||| | ||||||||     
T  27093070 tgtttagggaaatatgctcttttgaccccctaatatatgtgaaatatgttttttgaccccttatctttacaaaaagttgcaattatggccccttttttgg 27092971  T
Q  214 gacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     ||| |||||||||||||| ||||||||||| |||| ||| ||||||    
T  27092970 aacacgtggcgtcttctcagcaattttgggatgaaatgggccaaaat 27092924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 3616884 - 3617031
Alignment:
Q  114 atgtttagggcaatatgctcttttaaccccta-acatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||  ||||| | |||||||||| ||||| |  |||| ||||||||||||||||||||||| | ||||||||    
T  3616884 atgtttagggaaatatgctcttttgacctcttcacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatggccccttttttg 3616983  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||| |||  ||||||| ||||||    
T  3616984 ggacacgtggcgtcttctcagcaatttttggataaaaggggccaaaat 3617031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 24962038 - 24962157
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||| | ||||||||    
T  24962038 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttttttg 24962137  T
Q  213 agacatgtggcgtcttctca 232  Q
     |||| ||||||||||||||    
T  24962138 ggacacgtggcgtcttctca 24962157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 43706872 - 43706726
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttga 213  Q
    |||||||||| ||||||||||||| |||| ||||||| | |||||||||| ||||| |  |||| ||||||||||||||||||||||  | |||||  |     
T  43706872 atgtttagggaaatatgctcttttgacccataacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttccgg 43706773  T
Q  214 gacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    |||| ||||| |||||| | ||||||||||| |||||||| ||||||    
T  43706772 gacacgtggcatcttctgagcaattttgggatgaaaggggccaaaat 43706726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 46432435 - 46432288
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||||| ||||||| | |||||||||| ||||| |  |||| ||||||||||||||||||||||  | ||||| ||    
T  46432435 atgtttagggaaatatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttctg 46432336  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| ||||| |||||  | ||||||||||| |||||||| ||||||    
T  46432335 ggacacgtggcatcttccgagcaattttgggatgaaaggggccaaaat 46432288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 113 - 230
Target Start/End: Complemental strand, 26605495 - 26605379
Alignment:
Q  113 catgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    ||||||||||| |||||||| |||| |||||||||||| || ||||||||| |||||  | |||||||||||||||||| |||||||| ||  |||||||    
T  26605495 catgtttagggaaatatgctattttgacccctaacataaga-aaatatgttttttgatatcttatttttacaaaaagttacgattatgatcgattttttg 26605397  T
Q  213 agacatgtggcgtcttct 230  Q
     |||| || |||||||||    
T  26605396 ggacacgtagcgtcttct 26605379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 114 - 270
Target Start/End: Original strand, 24749883 - 24750041
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| | ||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||| |  |||||||    
T  24749883 atgtttagggaaatatgctcttttgacctcataacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccattttttg 24749982  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaatcgtaacatttt 270  Q
      ||| |||||||||||| | |||||||  || |||||||| |||||| | ||||||||    
T  24749983 gaacacgtggcgtcttcttagcaatttttagatgaaaggggccaaaattgcaacatttt 24750041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 114 - 248
Target Start/End: Complemental strand, 4455262 - 4455125
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatg-ttgtttgaacttttatttttacaaaaagttgcgattatggtctctttttt 211  Q
    |||||||||  ||||||||||||| ||||| ||||||| | |||||||| || ||||| |  |||| ||  ||||||||||||||||||| |  ||||||    
T  4455262 atgtttaggaaaatatgctcttttgaccccgtaacataagggaaatatgattttttgaccacttatcttctcaaaaagttgcgattatggccattttttt 4455163  T
Q  212 gagacatgtggcgtcttctca-caattttgggacgaaa 248  Q
    | |||||||||| |||||||| ||||||||||||||||    
T  4455162 gggacatgtggcatcttctcagcaattttgggacgaaa 4455125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 252
Target Start/End: Original strand, 47685181 - 47685326
Alignment:
Q  109 accccatgtttagggcaatatgctcttttaa-cccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctctt 207  Q
    |||||||||||| || |||||||| |||| | ||||||||||| |  ||||||||| ||||| |  |||  |||||||||||||||||| |||  |||||    
T  47685181 accccatgtttaaggaaatatgctattttgatcccctaacataaggaaaatatgttttttgaccccttacctttacaaaaagttgcgataatgacctctt 47685280  T
Q  208 ttttgagacatgtggcgtcttctca-caattttgggacgaaagggg 252  Q
    ||||  |||| |||||||||||| | |||||||||| |||||||||    
T  47685281 ttttaggacacgtggcgtcttcttagcaattttgggccgaaagggg 47685326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 264
Target Start/End: Complemental strand, 29182219 - 29182067
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgttt-gaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||| | ||||||||||||| |||||||||||| | |||||||| | ||| || |  |||| ||  || |||||||||||||||| |  |||||||    
T  29182219 atgtttagagaaatatgctcttttgacccctaacataagggaaatatgatcttttgaccccttatcttctcataaagttgcgattatggcccattttttg 29182120  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaatcgtaa 264  Q
    ||||| || ||||||||||| |||||||| |||||||| || |||||| ||||    
T  29182119 agacacgttgcgtcttctcagcaattttgagacgaaagaggccaaaatagtaa 29182067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 29676164 - 29676311
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||| | | | ||||||||| | |||||||| | ||||| |  |||| |||| |||||||||||||||||| | ||||||||    
T  29676164 atgtttagggaaatatgctcttgtgatctcctaacataagtgaaatatgctttttgaccccttatctttataaaaagttgcgattatggccccttttttg 29676263  T
Q  213 agacatgtggcgtcttctc-acaattttgggacgaaaggggacaaaat 259  Q
     |||| |||||| |||||| ||||||||  || |||||||| ||||||    
T  29676264 ggacacgtggcgccttctcaacaattttttgatgaaaggggccaaaat 29676311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 28920870 - 28920728
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctc-tttttt 211  Q
    |||||||||| ||||||||||||| ||| |||||||||      ||||| | ||||| |  |||| |||||||||||| |||||||||| | | ||||||    
T  28920870 atgtttagggaaatatgctcttttgacctcctaacata------atatgctttttgaccccttatctttacaaaaagtggcgattatggccccctttttt 28920777  T
Q  212 gagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    | ||||||||||||||||||| ||||||| ||| |||||||| ||||||    
T  28920776 gggacatgtggcgtcttctcagcaatttttggatgaaaggggtcaaaat 28920728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 16551863 - 16551715
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgttt-gaacttttatttttacaaaaagttgcgattatggtctctttttt 211  Q
    |||||||||| ||||||||||||| ||||| ||||||  || ||||||| | ||| || |  |||| ||  ||||||||||||||||||| |  | ||||    
T  16551863 atgtttagggaaatatgctcttttgaccccctaacatcagacaaatatgatcttttgaccccttatcttctcaaaaagttgcgattatggcccttgtttt 16551764  T
Q  212 gagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    | |||| |||||||||||||| |||||||||||||||||| | ||||||    
T  16551763 gggacacgtggcgtcttctcagcaattttgggacgaaaggtgccaaaat 16551715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 2425309 - 2425456
Alignment:
Q  114 atgtttagggcaatatgctcttttaaccc-ctaacatatgagaaatatgttgtttg-aacttttatttttacaaaaagttgcgattatggtctctttttt 211  Q
    |||||||||| ||||||||||||| |||| |||||||| | |||||||||| |||  |||  |||| ||||||||||||||||||||||  |  |||| |    
T  2425309 atgtttaggg-aatatgctcttttgaccctctaacataagggaaatatgttttttttaacccttatctttacaaaaagttgcgattatgacccattttct 2425407  T
Q  212 gagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    | |||| ||||| |||||| | ||||||||||| |||| ||| ||||||    
T  2425408 gggacacgtggcatcttctgagcaattttgggatgaaatgggccaaaat 2425456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 249
Target Start/End: Complemental strand, 9554350 - 9554283
Alignment:
Q  183 caaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctc-acaattttgggacgaaag 249  Q
    ||||||||||||| ||||| | || |||||||||| |||||| |||||| ||||||||||||||||||    
T  9554350 caaaaagttgcgactatggcccctgttttgagacacgtggcgccttctctacaattttgggacgaaag 9554283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 251
Target Start/End: Complemental strand, 51719340 - 51719202
Alignment:
Q  114 atgtttagggcaatatgctcttttaa-cccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| | ||||||||||| |  ||||||||| ||| | |  |||| ||||||||||||||||||||||  | ||||| ||    
T  51719340 atgtttagggaaatatgctcttttgatcccctaacataaggaaaatatgtttttt-accccttatctttacaaaaagttgcgattatgaccccttttctg 51719242  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggg 251  Q
    ||| | ||||| |||||| | ||||||||| | |||||||    
T  51719241 agatacgtggcatcttctgagcaattttggaatgaaaggg 51719202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 4059530 - 4059572
Alignment:
Q  40 tgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  4059530 tgcacttttcgccccctatgtttcaaaatgttgcgattttggc 4059572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 24196565 - 24196515
Alignment:
Q  32 ggctcaactgcacttttcgcc-cctatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||||||||||||||| ||||||||| |||||||||||||||||||    
T  24196565 ggctaaactgcacttttcgcctcctatgttttaaaatgttgcgattttggc 24196515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 48471871 - 48471913
Alignment:
Q  40 tgcacttttcg-cccctatgtttcaaaatgttgcgattttggc 81  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  48471871 tgcacttttcgtcccctatgtttcaaaatgttgcgattttggc 48471913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 43706659 - 43706704
Alignment:
Q  37 aactgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||    
T  43706659 aactgcacttttcgccccctatgtttcataatgttgcgattttggc 43706704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 16858487 - 16858535
Alignment:
Q  184 aaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca 232  Q
    |||||||||||||||||| | |||||||| ||||||||||| |||||||    
T  16858487 aaaaagttgcgattatggccccttttttgggacatgtggcggcttctca 16858535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 2425527 - 2425477
Alignment:
Q  32 ggctcaactgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||||||||||| ||||| ||||||||| |||||||||||||||||    
T  2425527 ggctaaactgcactttttgccccctatgtttcataatgttgcgattttggc 2425477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 3616799 - 3616849
Alignment:
Q  32 ggctcaactgcacttttcgccc-ctatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||| |||||||||||| ||| ||||||||||||||||||||||||    
T  3616799 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggc 3616849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 24196261 - 24196311
Alignment:
Q  32 ggctcaactgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||| ||||||||||||| || ||||||||||||||||||||||||    
T  24196261 ggctaaactccacttttcgccccctaagtttcaaaatgttgcgattttggc 24196311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 24750073 - 24750023
Alignment:
Q  32 ggctcaactgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||||||||||||||||| ||||||| |||||||||| ||||||||    
T  24750073 ggctaaactgcacttttcgccccctatgttttaaaatgttgcaattttggc 24750023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 27092853 - 27092903
Alignment:
Q  32 ggctcaactgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||||||||| ||||||| |||||||||||||||| ||||||||||    
T  27092853 ggctaaactgcacttctcgccccctatgtttcaaaatgttacgattttggc 27092903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 28920955 - 28920905
Alignment:
Q  32 ggctcaactgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||| ||||||||||||| || ||||||||||||||||||||||||    
T  28920955 ggctaaacttcacttttcgccccctaagtttcaaaatgttgcgattttggc 28920905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 46432224 - 46432266
Alignment:
Q  40 tgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    ||||||||||||||| ||||||||| |||||||||||||||||    
T  46432224 tgcacttttcgccccctatgtttcataatgttgcgattttggc 46432266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 51719123 - 51719173
Alignment:
Q  32 ggctcaactgcacttttcgccc-ctatgtttcaaaatgttgcgattttggc 81  Q
    |||| ||||||||||||||||| |||||||||| |||||||| ||||||||    
T  51719123 ggctaaactgcacttttcgccctctatgtttcataatgttgcaattttggc 51719173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 4455047 - 4455100
Alignment:
Q  37 aactgcacttttcg-cccctatgtttcaaaatgttgcgattttggcttcttatt 89  Q
    |||||||||||||| |||||| |||| |||||||||||||||| ||| ||||||    
T  4455047 aactgcacttttcgacccctaagttttaaaatgttgcgattttagctccttatt 4455100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 28552313 - 28552354
Alignment:
Q  40 tgcacttttcgcccc-tatgtttcaaaatgttgcgattttgg 80  Q
    ||||||||||||||| || |||||||||||||||||||||||    
T  28552313 tgcacttttcgccccctaagtttcaaaatgttgcgattttgg 28552354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 248
Target Start/End: Complemental strand, 31084804 - 31084695
Alignment:
Q  140 cccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctc-acaattt 238  Q
    |||||||||||||  ||||||| | ||||| |  |||| ||||||||||||| ||||||||  | | |||||| ||||||||| |  ||||| |||||||    
T  31084804 cccctaacatatggaaaatatgctttttgaccccttatctttacaaaaagtttcgattatgaccccctttttgggacatgtggggctttctcaacaattt 31084705  T
Q  239 tgggacgaaa 248  Q
    ||| ||||||    
T  31084704 tggaacgaaa 31084695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 50334867 - 50334818
Alignment:
Q  32 ggctcaactgcacttttcgcccctatgtttcaaaatgttgcgattttggc 81  Q
    |||| ||||| | |||||||||||||||||||||||||||  ||||||||    
T  50334867 ggctaaactgtatttttcgcccctatgtttcaaaatgttgtaattttggc 50334818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 16878984 - 16878940
Alignment:
Q  37 aactgcacttttcgcc-cctatgtttcaaaatgttgcgattttgg 80  Q
    |||||||||||||||| |||| |||||||||||||| ||||||||    
T  16878984 aactgcacttttcgccacctaagtttcaaaatgttgagattttgg 16878940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 46432510 - 46432470
Alignment:
Q  42 cacttttcgcccct-atgtttcaaaatgttgcgattttggc 81  Q
    |||||||||||||| | ||||||||||||||||||||||||    
T  46432510 cacttttcgccccttaagtttcaaaatgttgcgattttggc 46432470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 3e-30; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 19391606 - 19391459
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||||| ||||| |  |||| ||||||||||||||||||||||| | ||||||||    
T  19391606 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatggccccttttttg 19391507  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||| ||| |||||||| ||||||    
T  19391506 ggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaat 19391459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 5192490 - 5192343
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccct-aacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| || |||||| | |||||||||| ||||| || |||| ||||||||||||||||||||||| | ||||||||    
T  5192490 atgtttagggaaatatgctcttttgacctcttaacataagggaaatatgttttttgacctcttatctttacaaaaagttgcgattatggccccttttttg 5192391  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||| |||  ||||||| ||||||    
T  5192390 ggacacgtggcgtcttctcagcaatttttggataaaaggggccaaaat 5192343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 12723480 - 12723333
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||| | ||||||||||||| ||| ||||||||| | |||||||||| ||||| |  |||| ||||||||||||||||||||||||| ||||||||    
T  12723480 atgtttagagaaatatgctcttttgacctcctaacataagggaaatatgttttttgacccgttatctttacaaaaagttgcgattatggtcccttttttg 12723381  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     ||||  ||||||||||||| ||||||| | | |||||||| ||||||    
T  12723380 ggacacatggcgtcttctcagcaatttttgcatgaaaggggccaaaat 12723333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 1824685 - 1824836
Alignment:
Q  109 accccatgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgtttgaactt-ttatttttacaaaaagttgcgattatggtctctt 207  Q
    ||||||||||||||| ||||||||||||| |||||||||||| |  ||||||| | ||| ||||| |||| ||  ||||||||||||| ||||| || |     
T  1824685 accccatgtttagggaaatatgctcttttgacccctaacataaggaaaatatgatcttttaacttcttatcttctcaaaaagttgcgagtatggcct-tg 1824783  T
Q  208 ttttgagacatgtggcgtcttctc-acaattttgggacgaaaggggacaaaat 259  Q
    ||||| |||| ||||||||||||| ||||||||| ||||||||||| ||||||    
T  1824784 ttttgggacacgtggcgtcttctcaacaattttgagacgaaaggggccaaaat 1824836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 1859130 - 1859281
Alignment:
Q  109 accccatgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgtttgaactt-ttatttttacaaaaagttgcgattatggtctctt 207  Q
    ||||||||||||||| ||||||||||||| |||||||||||| |  ||||||| | ||| ||||| |||| ||  ||||||||||||| ||||| || |     
T  1859130 accccatgtttagggaaatatgctcttttgacccctaacataaggaaaatatgatcttttaacttcttatcttctcaaaaagttgcgagtatggcct-tg 1859228  T
Q  208 ttttgagacatgtggcgtcttctc-acaattttgggacgaaaggggacaaaat 259  Q
    ||||| |||| ||||||||||||| ||||||||| ||||||||||| ||||||    
T  1859229 ttttgggacacgtggcgtcttctcaacaattttgagacgaaaggggccaaaat 1859281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 240
Target Start/End: Complemental strand, 4519086 - 4518958
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| | | ||||||||| | |||||||||| ||||| |  |||| ||||||||||||||||||||||| | ||||||||    
T  4519086 atgtttagggaaatatgctcttttgatctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatggccccttttttg 4518987  T
Q  213 agacatgtggcgtcttctc-acaattttg 240  Q
     |||| ||||||||||||| |||||||||    
T  4518986 ggacacgtggcgtcttctcaacaattttg 4518958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 117 - 259
Target Start/End: Complemental strand, 22452389 - 22452245
Alignment:
Q  117 tttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttgaga 215  Q
    ||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| || |||| ||||||||||||||||| ||| | |  ||||||| ||    
T  22452389 tttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgaatatagccctttttttggga 22452290  T
Q  216 catgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    || |||||||||||||| |||||||||||||||| ||| ||||||    
T  22452289 cacgtggcgtcttctcagcaattttgggacgaaatgggccaaaat 22452245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 8802618 - 8802472
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | ||||||  || ||||| |  |||| ||||||||||||||||||||||| | ||||||||    
T  8802618 atgtttagggaaatatgctcttttgacctcctaacataagggaaatagctt-tttgaccccttatctttacaaaaagttgcgattatggccccttttttg 8802520  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
      |||||||||||||||||| ||||||||||| ||| |||| ||||||    
T  8802519 gaacatgtggcgtcttctcagcaattttgggatgaagggggccaaaat 8802472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 38630140 - 38630287
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||  | ||||||||    
T  38630140 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccccttttttg 38630239  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| |||||||| || ||| |||| ||||||    
T  38630240 ggacacgtggcgtcttctcagcaattttgagatgaagggggccaaaat 38630287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 110 - 259
Target Start/End: Complemental strand, 21666497 - 21666346
Alignment:
Q  110 ccccatgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttt 208  Q
    |||||||||||||| |||||||||| || ||||| ||||||| | |||||||||| ||||| |  |||| |||| | |||||||| ||||||| | ||||    
T  21666497 ccccatgtttagggaaatatgctctcttgaccccctaacataagggaaatatgttttttgaccccttatctttagataaagttgcaattatggccccttt 21666398  T
Q  209 tttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    |||| ||||  ||||||||||||| |||||||| |||||| |||| ||||||    
T  21666397 tttgggacacatggcgtcttctcagcaattttgagacgaagggggccaaaat 21666346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 30784483 - 30784337
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||||| ||||| |  |||| ||||||||||||||||||||||| | ||||||||    
T  30784483 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgg-cccttttttg 30784385  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| ||| | |||||||| ||||||| ||| ||| |||| ||||||    
T  30784384 ggacacgtgacttcttctcagcaatttttggatgaatggggccaaaat 30784337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 18253110 - 18252960
Alignment:
Q  109 accccatgtttagggcaatatgctcttttaacccctaacatatgagaaatatg-ttgtttgaacttttatttttacaaaaagttgcgattatggtctctt 207  Q
    ||||||||||||||| |||||| | |||| |||| ||||||| | |||||||| || ||||| |  |||| ||  |||||||||| |||||||| | ||     
T  18253110 accccatgtttagggaaatatgtttttttgacccataacataagggaaatatgattttttgaccccttatcttctcaaaaagttgtgattatggccactg 18253011  T
Q  208 ttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaa 257  Q
    ||||| |||| |||||||||||||| |||||||||||||||||||| ||||    
T  18253010 ttttgggacacgtggcgtcttctcagcaattttgggacgaaaggggccaaa 18252960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 114 - 257
Target Start/End: Original strand, 17648328 - 17648473
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||| | | |||||     
T  17648328 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccccttttta 17648427  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaa 257  Q
     |||| ||||| |||||||| ||||||| ||| |||||||| ||||    
T  17648428 ggacacgtggcctcttctcagcaatttttggatgaaaggggccaaa 17648473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 33895459 - 33895605
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||||| ||| | |  |||| ||||||||||||||| ||||||| | |||||||     
T  33895459 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttaaccccttatctttacaaaaagttgcaattatgg-cccttttttt 33895557  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| ||||||||||||||  |||||| ||| |||||||| ||||||    
T  33895558 ggacacgtggcgtcttctcagaaatttttggatgaaaggggccaaaat 33895605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 259
Target Start/End: Complemental strand, 7117339 - 7117186
Alignment:
Q  109 accccatgtttagggcaatatgctcttttaaccc-ctaacatatgagaaatatgttgtttgaactt-ttatttttacaaaaagttgcgattatggtctct 206  Q
    ||||||||||||| | ||||||||||||| |||| |||||| | | | ||| |||| ||| |||   |||| ||||||||||||||| ||||||| |  |    
T  7117339 accccatgtttagagaaatatgctcttttgacccactaacagaaggggaatgtgttcttttaaccccttatctttacaaaaagttgcaattatggccctt 7117240  T
Q  207 tttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    |||||| ||||||||||||||||||| || |||| |||||||||||| ||||||    
T  7117239 tttttgggacatgtggcgtcttctcagcagttttaggacgaaaggggccaaaat 7117186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 4807819 - 4807700
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    ||||||| || |||||| |||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||| | ||||||||    
T  4807819 atgtttaaggaaatatgttcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttttttg 4807720  T
Q  213 agacatgtggcgtcttctca 232  Q
      ||| ||||||||||||||    
T  4807719 gaacacgtggcgtcttctca 4807700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 19924350 - 19924469
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||| ||||| | ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||  | ||||||||    
T  19924350 atgtttagggaaatatactcttctgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccccttttttg 19924449  T
Q  213 agacatgtggcgtcttctca 232  Q
     |||| ||||||||||||||    
T  19924450 ggacacgtggcgtcttctca 19924469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 23565235 - 23565321
Alignment:
Q  174 ttatttttacaaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    |||| ||||||||||||||||||||||| |  |||||| | |||||||||||||||||| ||||||| ||| |||||||| ||||||    
T  23565235 ttatctttacaaaaagttgcgattatggcccttttttttaaacatgtggcgtcttctcagcaatttttggatgaaaggggccaaaat 23565321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 19391388 - 19391436
Alignment:
Q  32 ggctcaactgcacttttcgcccctatgtttcaaaatgttgcgattttgg 80  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||    
T  19391388 ggctaaactgcacttttcgcccctatgtttcaaaatgttgcaattttgg 19391436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 249
Target Start/End: Original strand, 3208065 - 3208202
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgttt-gaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| |||||| |||||| |||||||||||| | |||||||| | ||| || |  |||| ||   |||||||||||||||||  |  |||||||    
T  3208065 atgtttagggaaatatgttcttttgacccctaacataagggaaatatgatattttgaccccttatcttcttaaaaagttgcgattatgacccattttttg 3208164  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaag 249  Q
     |||| ||||||||||||||  ||||||||||||||||    
T  3208165 ggacacgtggcgtcttctcagtaattttgggacgaaag 3208202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 110 - 259
Target Start/End: Original strand, 31268360 - 31268511
Alignment:
Q  110 ccccatgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgttt-gaacttttatttttacaaaaagttgcgattatggtctc-tt 207  Q
    |||| ||||||||| |||||||||||||  ||| ||||||| | ||| |||| | ||| || | ||||| |||| ||||||||| ||||||| || | ||    
T  31268360 ccccgtgtttagggaaatatgctcttttgccccataacataagggaa-tatgctctttagaccctttatctttataaaaagttgtgattatgatcccctt 31268458  T
Q  208 ttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    ||||| |||||| |||||||||| | ||||||| |||||||||||| ||||||    
T  31268459 ttttgggacatgcggcgtcttcttagcaattttaggacgaaaggggccaaaat 31268511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 251
Target Start/End: Complemental strand, 32400541 - 32400402
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||| | ||||||| ||||| ||||| ||||||| | ||||||||   ||||| | ||||| ||||||||||||||| ||||||  | ||||||||    
T  32400541 atgtttagtgaaatatgcgcttttgaccccctaacataagggaaatatgccttttgaccatttatctttacaaaaagttgcaattatgaccccttttttg 32400442  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggg 251  Q
      ||| |||| ||||||||| ||||||||| | |||||||    
T  32400441 gaacacgtggtgtcttctcagcaattttggtatgaaaggg 32400402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 44147056 - 44147186
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| |||||||| |||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||| ||||||||||||  | ||||||||    
T  44147056 atgtttagggaaatatgctattttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaa-gttgcgattatgaccccttttttg 44147154  T
Q  213 agacatgtggcgtcttctca-caattttggga 243  Q
     || |  ||||||||||||| |||||||||||    
T  44147155 ggatacatggcgtcttctcagcaattttggga 44147186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 4807600 - 4807650
Alignment:
Q  32 ggctcaactgcacttttcgcc-cctatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||||||||||||||| |||||||||||||||||||| ||||||||    
T  4807600 ggctaaactgcacttttcgcctcctatgtttcaaaatgttgcaattttggc 4807650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 257
Target Start/End: Complemental strand, 17813083 - 17813010
Alignment:
Q  185 aaaagttgcgattatggtctcttttttgagacatgtggcgtcttctc-acaattttgggacgaaaggggacaaa 257  Q
    ||||||||||||||||  ||||||||||||||| ||||  |||| || |||||||||| |||||||||| ||||    
T  17813083 aaaagttgcgattatgacctcttttttgagacacgtggtatcttttcaacaattttggaacgaaaggggtcaaa 17813010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 5192272 - 5192322
Alignment:
Q  32 ggctcaactgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||| ||||||||||||| |||||||||||||||||| ||||||||    
T  5192272 ggctaaacttcacttttcgccccctatgtttcaaaatgttgcaattttggc 5192322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 259
Target Start/End: Complemental strand, 18881661 - 18881575
Alignment:
Q  174 ttatttttacaaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    |||| ||||||||||||||| ||||||  | ||| |||| ||||  ||| ||||||||| ||||||||||||||| |||| ||||||    
T  18881661 ttatctttacaaaaagttgcaattatgaccccttatttgggacacttggtgtcttctcaacaattttgggacgaagggggccaaaat 18881575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 19392870 - 19392820
Alignment:
Q  32 ggctcaactgcacttttcgccc-ctatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||| |||||||||||| ||| ||||||||||||||||||||||||    
T  19392870 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggc 19392820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 30784568 - 30784510
Alignment:
Q  32 ggctcaactgcacttttcgccc-ctatgtttcaaaatgttgcgattttggcttcttatt 89  Q
    |||| |||| |||||||||||| ||| ||||||||||||||||||||||||  ||||||    
T  30784568 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggccccttatt 30784510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 44147266 - 44147224
Alignment:
Q  40 tgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    ||||||||||||||| ||||||||||||| |||||||||||||    
T  44147266 tgcacttttcgccccatatgtttcaaaatattgcgattttggc 44147224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 12723560 - 12723515
Alignment:
Q  37 aactgcacttttcgccc-ctatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||||||||||| ||| ||||||||||||||||||||||||    
T  12723560 aacttcacttttcgccctctaagtttcaaaatgttgcgattttggc 12723515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 193
Target Start/End: Original strand, 3380279 - 3380363
Alignment:
Q  110 ccccatgtttagggcaatatgctcttttaaccc-ctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgc 193  Q
    |||||||||||||  |||||||||||||  ||| ||| |||| | |||||||||| ||||| || |||| | |||||||||||||    
T  3380279 ccccatgtttaggtaaatatgctcttttgtccctctagcataagggaaatatgttttttgacctcttatctctacaaaaagttgc 3380363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 21930105 - 21930057
Alignment:
Q  32 ggctcaactgcacttttcgccc-ctatgtttcaaaatgttgcgattttg 79  Q
    |||| |||| |||||||||||| ||| ||||||||||||||||||||||    
T  21930105 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttg 21930057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 3e-30; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 16901216 - 16901069
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||||| ||||| |  |||| ||||||||||||||||||||||| | ||||||||    
T  16901216 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatggccccttttttg 16901117  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||||||| |||| ||| ||||||    
T  16901116 ggacacgtggcgtcttctcagcaattttgggatgaaatgggccaaaat 16901069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 25557094 - 25556947
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||||| ||||||| | |||||||||| ||||| |  |||| ||||||||||||||| ||||||| | ||||||||    
T  25557094 atgtttagggaaatatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcaattatggccccttttttg 25556995  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||||||| |||||||| ||||||    
T  25556994 ggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaat 25556947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 18695088 - 18695235
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||| | ||||||||    
T  18695088 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttttttg 18695187  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| |||||||| || |||||||| ||||||    
T  18695188 ggacacgtggcgtcttctcagcaattttgagatgaaaggggccaaaat 18695235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 113 - 264
Target Start/End: Complemental strand, 17825717 - 17825564
Alignment:
Q  113 catgtttagggcaatatgctcttttaacccctaacatatgagaaatatgtt-gtttgaacttttatttttacaaaaagttgcgattatggtctctttttt 211  Q
    ||||||||||| ||||||||||||| |||||||||||| ||||||||||||  ||||| | ||||| ||  ||||||||||||||||||| | |||||||    
T  17825717 catgtttagggaaatatgctcttttgacccctaacataagagaaatatgttcttttgaccctttatcttgtcaaaaagttgcgattatggcccctttttt 17825618  T
Q  212 gagacatgtggcgtcttct-cacaattttgggacgaaaggggacaaaatcgtaa 264  Q
    | |||| ||||||||||||  | ||||||| || |||||||| |||||| ||||    
T  17825617 gggacacgtggcgtcttctaaaaaattttgagatgaaaggggccaaaattgtaa 17825564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 245679 - 245826
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||| | ||||||||    
T  245679 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttttttg 245778  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||| ||| ||| |||| ||||||    
T  245779 ggacacgtggcgtcttctcagcaattttcggatgaagggggccaaaat 245826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 26639256 - 26639109
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | ||||||||   ||||| |  |||| ||||||||||||||| ||||||| ||||||||||    
T  26639256 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgcgttttgaccccttatctttacaaaaagttgcaattatggcctcttttttg 26639157  T
Q  213 agacatgtggcgtcttctc-acaattttgggacgaaaggggacaaaat 259  Q
     |||| ||||||||||||| |||||||||||| ||| |||| ||||||    
T  26639156 ggacacgtggcgtcttctcaacaattttgggatgaagggggccaaaat 26639109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 23765609 - 23765492
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| | ||||| |||||||||||||||||||||||||| |||||||    
T  23765609 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgatcatttatctttacaaaaagttgcgattatggtct-ttttttg 23765511  T
Q  213 agacatgtggcgtcttctca 232  Q
     |||| ||||||||||||||    
T  23765510 -gacacgtggcgtcttctca 23765492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 23815457 - 23815340
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| | ||||| |||||||||||||||||||||||||| |||||||    
T  23815457 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgatcatttatctttacaaaaagttgcgattatggtct-ttttttg 23815359  T
Q  213 agacatgtggcgtcttctca 232  Q
     |||| ||||||||||||||    
T  23815358 -gacacgtggcgtcttctca 23815340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 114 - 251
Target Start/End: Original strand, 10379367 - 10379505
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttga 213  Q
    |||||||||  ||||||||||||| |||||||||||| | |||||||||| ||||| |  |||| ||||||||||||||||||||||  | ||||| |||    
T  10379367 atgtttaggaaaatatgctcttttgacccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttctga 10379466  T
Q  214 gacatgtggcgtcttctca-caattttgggacgaaaggg 251  Q
    |||| ||||| |||||| |  |||||||||| |||||||    
T  10379467 gacaagtggcatcttctgagaaattttgggatgaaaggg 10379505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 115 - 259
Target Start/End: Complemental strand, 40428857 - 40428711
Alignment:
Q  115 tgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttga 213  Q
    ||||||||| |||||| |||||| ||| ||||||||| | |||||||| | ||||| |  |||| |||||||||| |||||||||||  | ||||||||     
T  40428857 tgtttagggaaatatgttcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaaattgcgattatgaccccttttttgg 40428758  T
Q  214 gacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    |||| |||||||||||||| ||||||||||||||| |||| ||||||    
T  40428757 gacacgtggcgtcttctcagcaattttgggacgaagggggccaaaat 40428711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 109 - 264
Target Start/End: Complemental strand, 41663748 - 41663590
Alignment:
Q  109 accccatgtttagggcaatatgctcttttaacccc-taacatatgagaaatatg-ttgtttgaacttttatttttacaaaaagttgcgattatggtctct 206  Q
    ||||||||||||||| ||||||||||||| ||||| ||||||| | |||||||| || |||||   ||||||||  |||||| |||||||||||| | ||    
T  41663748 accccatgtttagggaaatatgctcttttgaccccataacataagggaaatatgattttttgactctttattttctcaaaaaattgcgattatggcccct 41663649  T
Q  207 tttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaatcgtaa 264  Q
    |||||| |||| ||||| |||||| | |||||||||||||||| ||| |||||| ||||    
T  41663648 tttttgggacacgtggcatcttcttagcaattttgggacgaaatgggtcaaaattgtaa 41663590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 114 - 257
Target Start/End: Complemental strand, 10293306 - 10293161
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||| ||| ||||||||||||| ||| ||||||||| | |||||||||| |||||    |||| ||| ||||||||||||||||||  |||||||||     
T  10293306 atgttttgggaaatatgctcttttgacctcctaacataagggaaatatgttttttgactccttatctttccaaaaagttgcgattatgacctctttttta 10293207  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaa 257  Q
    |||||||||||||||||||| || |||| |||||||| ||| ||||    
T  10293206 agacatgtggcgtcttctcagcatttttaggacgaaatgggccaaa 10293161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 31055533 - 31055386
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccct-aacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| |||||| |||||| | |||||||||| ||||| |  |||| |||||||||| |||||||||||  | ||||| ||    
T  31055533 atgtttagggaaatatgctcttttgaccccttaacataagggaaatatgttttttgaccccttatctttacaaaaaattgcgattatgaccccttttctg 31055434  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| ||||| |||||| | ||||||||||| |||||||| ||||||    
T  31055433 ggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaat 31055386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 109 - 228
Target Start/End: Original strand, 7187269 - 7187388
Alignment:
Q  109 accccatgtttagggcaatatgctcttttaaccc-ctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctctt 207  Q
    ||||||||||||||| |||||  |||||| |||| |||||||| | |||||||||| | ||| |  |||||||||||||||||||||||||| | | |||    
T  7187269 accccatgtttagggaaatatattcttttgaccctctaacataagggaaatatgttttatgaccaattatttttacaaaaagttgcgattat-gaccctt 7187367  T
Q  208 ttttgagacatgtggcgtctt 228  Q
    ||||| |||||||||||||||    
T  7187368 ttttgggacatgtggcgtctt 7187388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 114 - 249
Target Start/End: Original strand, 7835795 - 7835931
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttga 213  Q
    |||||||||| ||||||||||||| |||| ||||||| |  ||||||||| ||||| |  |||| |||||||| || || |||||||| |  |||||| |    
T  7835795 atgtttagggaaatatgctcttttgacccataacataaggaaaatatgttttttgaccccttatctttacaaagaggtgggattatggccctttttttta 7835894  T
Q  214 gacatgtggcgtcttctc-acaattttgggacgaaag 249  Q
    |||||||||||||||||| |||| ||||||| |||||    
T  7835895 gacatgtggcgtcttctcaacaactttgggatgaaag 7835931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 36641228 - 36641375
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||| | ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| |||| ||||||||||||||||| || ||||||||    
T  36641228 atgtttagagaaatatgctcttttgacctcctaacataagggaaatatgctttttgacccgttatctttataaaaagttgcgattatgatcccttttttg 36641327  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     ||||  ||||||||||||| |||||||  || |||||||| ||||||    
T  36641328 ggacacatggcgtcttctcagcaattttttgatgaaaggggccaaaat 36641375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 111 - 248
Target Start/End: Complemental strand, 17704808 - 17704670
Alignment:
Q  111 cccatgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttt 210  Q
    ||||||||||||  ||||||||||||| |||| ||||||| | |||||||  | ||||| | ||||| ||||||||||||||  ||||||| | ||||||    
T  17704808 cccatgtttaggaaaatatgctcttttgacccataacataagggaaatatactttttgaccctttatctttacaaaaagttgaaattatggccccttttt 17704709  T
Q  211 tgagacatgtggcgtcttctca-caattttgggacgaaa 248  Q
    || || | ||||| | |||||| ||||||||||||||||    
T  17704708 tgggataagtggcatgttctcagcaattttgggacgaaa 17704670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 16307696 - 16307548
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc--taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctctttttt 211  Q
    |||||||||| ||||||||||||| |||||  ||||||| |  ||||||||| |||||    |||| ||||||||||||||| ||||||  | |||||||    
T  16307696 atgtttagggaaatatgctcttttgacccccctaacataaggaaaatatgttttttgactccttatctttacaaaaagttgcaattatgacccctttttt 16307597  T
Q  212 gagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
      ||||||||||||||||||| |||||||  || |||||||| ||||||    
T  16307596 tggacatgtggcgtcttctcagcaattttaagatgaaaggggccaaaat 16307548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 251
Target Start/End: Original strand, 38408714 - 38408852
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttga 213  Q
    |||||||| | ||||||||||||| ||| |||||||| | |||||||||| ||||| |  |||| ||||||||||||||| ||||||  |  |||| ||     
T  38408714 atgtttagagaaatatgctcttttgaccactaacataagggaaatatgttttttgaccccttatctttacaaaaagttgctattatgacccattttctgg 38408813  T
Q  214 gacatgtggcgtcttctca-caattttgggacgaaaggg 251  Q
    |||| ||||| |||||| | ||||||||||| |||||||    
T  38408814 gacacgtggcatcttctgagcaattttgggatgaaaggg 38408852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 117 - 259
Target Start/End: Complemental strand, 38476686 - 38476542
Alignment:
Q  117 tttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgttt-gaacttttatttttacaaaaagttgcgattatggtctcttttttgag 214  Q
    ||||||| ||||||||||||| ||||| ||||||| | |||||||| | ||| || |  |||| ||  ||||||||||||||||||  | |||||||| |    
T  38476686 tttagggaaatatgctcttttgaccccataacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcgattatgacc-cttttttggg 38476588  T
Q  215 acatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    ||| |||||||||||||| |||||||||||||||| ||| ||||||    
T  38476587 acacgtggcgtcttctcagcaattttgggacgaaatgggccaaaat 38476542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 31648288 - 31648238
Alignment:
Q  32 ggctcaactgcacttttcg-cccctatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  31648288 ggctaaactgcacttttcgtcccctatgtttcaaaatgttgcgattttggc 31648238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 25556877 - 25556926
Alignment:
Q  32 ggctcaactgcacttttcgcccctatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  25556877 ggctaaactgcacttatcgcccctatgtttcaaaatgttgcaattttggc 25556926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 125 - 259
Target Start/End: Original strand, 2373241 - 2373377
Alignment:
Q  125 aatatgctcttttaacccctaacatatgagaaatatgttgtt-tgaacttttatttttacaaaaagttgcgattatggtctcttttttgagacatgtggc 223  Q
    ||||||||||||| |||| ||||||| | |||||||| | || ||| |  |||||||  |||||| |||||||||||  | |||||| | |||| |||||    
T  2373241 aatatgctcttttgacccataacataagggaaatatgatattatgaccccttattttctcaaaaatttgcgattatgacccctttttggggacacgtggc 2373340  T
Q  224 gtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    ||||||| | |||||||||||||| ||||| ||||||    
T  2373341 gtcttcttagcaattttgggacgacaggggccaaaat 2373377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 16900997 - 16901045
Alignment:
Q  32 ggctcaactgcacttttcgcc-cctatgtttcaaaatgttgcgattttg 79  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||    
T  16900997 ggctaaactgcacttttcgcctcctatgtttcaaaatgttgcgattttg 16901045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 113 - 257
Target Start/End: Original strand, 462850 - 462996
Alignment:
Q  113 catgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgttt-gaacttttatttttacaaaaagttgcgattatggtctctttttt 211  Q
    ||||||||||| |||||||  |||| |||  ||| ||| |||||||||||| ||| || |  |||| ||||||||||||||||||||||  ||  |||||    
T  462850 catgtttagggaaatatgcctttttgacctataatataagagaaatatgttcttttgaccccttatctttacaaaaagttgcgattatgaccttcttttt 462949  T
Q  212 gagacatgtggcgtcttctc-acaattttgggacgaaaggggacaaa 257  Q
     ||||| |||||||||| || |||||||| |||| ||| ||| ||||    
T  462950 tagacacgtggcgtcttttcaacaatttttggaccaaaagggccaaa 462996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 23765420 - 23765470
Alignment:
Q  32 ggctcaactgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||||||||||||||||| |||||||||||||||||| ||||||||    
T  23765420 ggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggc 23765470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 23815268 - 23815318
Alignment:
Q  32 ggctcaactgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||||||||||||||||| |||||||||||||||||| ||||||||    
T  23815268 ggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggc 23815318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 114 - 249
Target Start/End: Complemental strand, 15885383 - 15885247
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccct-aacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    ||||||| || ||||| ||||||| ||| || |||||| | ||||||||||  |||| | || || ||||||||||||| |||||||||||  |||||||    
T  15885383 atgtttatggaaatattctcttttgacctcttaacataagggaaatatgtttgttgaccctt-atctttacaaaaagtttcgattatggtcatttttttg 15885285  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaag 249  Q
     ||||||||| || |||||| ||||||||  |||||||    
T  15885284 ggacatgtggtgttttctcagcaattttgaaacgaaag 15885247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 40428647 - 40428688
Alignment:
Q  40 tgcacttttcgcccc-tatgtttcaaaatgttgcgattttgg 80  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  40428647 tgcacttttcgccccctatgtttcaaaatgttgcgattttgg 40428688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 20653904 - 20653952
Alignment:
Q  113 catgtttagggcaatatgctcttttaacccctaacatatgagaaatatg 161  Q
    ||||||||||| ||||||||||||| |||||||||||| | ||||||||    
T  20653904 catgtttagggaaatatgctcttttgacccctaacataagtgaaatatg 20653952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 89
Target Start/End: Complemental strand, 7836012 - 7835954
Alignment:
Q  32 ggctcaactgcacttttcgcccct-atgtttcaaaatgttgcgattttggcttcttatt 89  Q
    |||| |||||||||||||||| || |||||| ||||| |||||||||||||||| ||||    
T  7836012 ggctaaactgcacttttcgcctcttatgttttaaaatattgcgattttggcttcctatt 7835954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 8646045 - 8646003
Alignment:
Q  40 tgcacttttcgcccct-atgtttcaaaatgttgcgattttggc 81  Q
    |||||||||||||||| |||||| |||||||||||||||||||    
T  8646045 tgcacttttcgccccttatgttttaaaatgttgcgattttggc 8646003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 18695298 - 18695256
Alignment:
Q  40 tgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    ||||||||||||||| ||||||||||||| |||||||||||||    
T  18695298 tgcacttttcgccccctatgtttcaaaatattgcgattttggc 18695256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 20654098 - 20654048
Alignment:
Q  32 ggctcaactgcacttttcg-cccctatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||||||||||||| |||||| |||||||||||||| |||||||||    
T  20654098 ggctaaactgcacttttcgacccctaagtttcaaaatgttgtgattttggc 20654048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 31055315 - 31055365
Alignment:
Q  32 ggctcaactgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||||||||||||||||| ||||||||| |||||||| ||||||||    
T  31055315 ggctaaactgcacttttcgccccctatgtttcataatgttgcaattttggc 31055365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 31576493 - 31576542
Alignment:
Q  32 ggctcaactgcacttttcg-cccctatgtttcaaaatgttgcgattttgg 80  Q
    |||| |||||||||||||| |||||| ||||||||||||||| |||||||    
T  31576493 ggctaaactgcacttttcgacccctaagtttcaaaatgttgcaattttgg 31576542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 26639045 - 26639085
Alignment:
Q  40 tgcacttttcgcccc-tatgtttcaaaatgttgcgattttg 79  Q
    ||||||||||||||| ||||||||||||||||| |||||||    
T  26639045 tgcacttttcgccccctatgtttcaaaatgttgtgattttg 26639085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 40428941 - 40428893
Alignment:
Q  32 ggctcaactgcacttttcgccc-ctatgtttcaaaatgttgcgattttg 79  Q
    |||| |||| |||||||||||| ||| ||||||||||||||||||||||    
T  40428941 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttg 40428893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 3e-30; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 43793850 - 43793703
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||||| ||||| |  |||| ||||||||||||||||| ||||  | ||||||||    
T  43793850 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatatttacaaaaagttgcgaatatgaccccttttttg 43793751  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     ||||||||||||||||||| |||||||||||||||| ||| ||||||    
T  43793750 ggacatgtggcgtcttctcagcaattttgggacgaaatgggccaaaat 43793703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 114 - 257
Target Start/End: Complemental strand, 15059037 - 15058892
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||| | | ||||||||    
T  15059037 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatagccccttttttg 15058938  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaa 257  Q
     |||| |||||||||||||| ||||||||||| |||||||| ||||    
T  15058937 ggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaa 15058892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 13397894 - 13397747
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||| | ||||||||    
T  13397894 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttttttg 13397795  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||| ||| ||| |||| ||||||    
T  13397794 ggacacgtggcgtcttctcagcaattttcggatgaagggggccaaaat 13397747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 13826638 - 13826491
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||| ||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||| | | ||||||||    
T  13826638 atgtttcgggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatagccccttttttg 13826539  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||||||| |||||||| ||||||    
T  13826538 ggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaat 13826491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 35475369 - 35475521
Alignment:
Q  109 accccatgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctctt 207  Q
    |||| |||||||||| ||||||||||||| ||| ||||||||| | |||||||||| ||||| |  |||| |||||||||||| |||||||||  | |||    
T  35475369 accctatgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagtagcgattatgacccctt 35475468  T
Q  208 ttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    ||||| |||| |||||||||||||| ||||||| ||| |||| ||| ||||||    
T  35475469 ttttgggacacgtggcgtcttctcagcaattttaggatgaaatgggccaaaat 35475521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 27018299 - 27018446
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||||| ||||| | | |||||||||| ||||| |  ||||  |||||||||||||| ||||||| | ||||||||    
T  27018299 atgtttagggaaatatgctcttttgaccccctaacaaaagggaaatatgttttttgaccccttatccttacaaaaagttgcaattatggccccttttttg 27018398  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||||||| |||| ||| ||||||    
T  27018399 ggacacgtggcgtcttctcagcaattttgggatgaaatgggccaaaat 27018446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 119 - 232
Target Start/End: Complemental strand, 2715930 - 2715817
Alignment:
Q  119 tagggcaatatgctcttttaacccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttgagacat 218  Q
    ||||| |||||| |||||| |||||||||||||| |||||||| | ||||| |  |||| ||||||||||||||||||||||| |  ||||||| ||||     
T  2715930 tagggaaatatgatcttttgacccctaacatatgggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccattttttgggacac 2715831  T
Q  219 gtggcgtcttctca 232  Q
    ||||||||||||||    
T  2715830 gtggcgtcttctca 2715817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 114 - 210
Target Start/End: Complemental strand, 1588631 - 1588535
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttt 210  Q
    |||||||||| ||||||||||||| |||||||||||| | |||||||||| ||||| |  |||| ||||||||||||||||||||| | ||||||||    
T  1588631 atgtttagggaaatatgctcttttgacccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatagcctcttttt 1588535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 5304566 - 5304419
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| |  ||||||| | ||||| |  |||| ||||||||||||||||||||||| |  |||||||    
T  5304566 atgtttagggaaatatgctcttttgacctcctaacataaggaaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccattttttg 5304467  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| |||||||| || ||| |||| ||||||    
T  5304466 ggacacgtggcgtcttctcagcaattttgcgatgaagggggccaaaat 5304419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 125 - 232
Target Start/End: Original strand, 52838324 - 52838431
Alignment:
Q  125 aatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttgagacatgtggc 223  Q
    ||||||||||||| ||| ||||||||| | |||||||| | ||||| | || || ||||||||||||||||||||||||| ||||||||||||| ||| |    
T  52838324 aatatgctcttttgacctcctaacatacgggaaatatgctttttgaccctt-atctttacaaaaagttgcgattatggtcccttttttgagacacgtgtc 52838422  T
Q  224 gtcttctca 232  Q
    |||||||||    
T  52838423 gtcttctca 52838431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 25011820 - 25011967
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||||| ||||||| | |  ||||||| ||||| |  |||| |||||||||||||| ||||||| || ||||||||    
T  25011820 atgtttagggaaatatgctcttttgaccccctaacataagggggatatgttttttgaccccttatctttacaaaaagttgggattatgatcccttttttg 25011919  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| ||||| |||||| | ||||||||| | |||||||| ||||||    
T  25011920 ggacacgtggcatcttctgagcaattttggaatgaaaggggccaaaat 25011967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 9195882 - 9195796
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatg 200  Q
    |||||||||| ||||||||||||| |||| ||||||| | |||||||||| ||||| |  |||| ||||||||||||||||||||||    
T  9195882 atgtttagggaaatatgctcttttgacccataacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 9195796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 125 - 249
Target Start/End: Original strand, 15795413 - 15795539
Alignment:
Q  125 aatatgctctttt-aacccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttgagacatgtggc 223  Q
    ||||||||||||| ||| ||||||||| | |||||| | | ||||| ||||||| ||| |||||||||| |||||||  |  ||||||  ||||||||||    
T  15795413 aatatgctcttttgaactcctaacataagggaaataggctttttgaccttttatcttttcaaaaagttgggattatgacccattttttaggacatgtggc 15795512  T
Q  224 gtcttctca-caattttgggacgaaag 249  Q
    ||||||||| |||||||||||||||||    
T  15795513 gtcttctcatcaattttgggacgaaag 15795539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 41034727 - 41034839
Alignment:
Q  120 agggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttgagacat 218  Q
    |||| |||||| |||||| ||| ||||||||| | |||||||| | ||||| |  |||||||||||||||||||||||||| ||| ||||||||  |||     
T  41034727 agggaaatatgatcttttgacctcctaacataagggaaatatgctttttgaccccttatttttacaaaaagttgcgattatagtcccttttttggaacac 41034826  T
Q  219 gtggcgtcttctc 231  Q
    |||||||||||||    
T  41034827 gtggcgtcttctc 41034839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 113 - 248
Target Start/End: Complemental strand, 51291390 - 51291252
Alignment:
Q  113 catgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgttt-gaacttttatttttacaaaaagttgcgattatggtctcttttt 210  Q
    ||||||||||| |||||| |||||| ||||| ||||||| | |||||||| | ||| || |  |||| ||  |||||||||| |||||||| | ||||||    
T  51291390 catgtttagggaaatatgttcttttgaccccctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgtgattatggccccttttt 51291291  T
Q  211 tgagacatgtggcgtcttctca-caattttgggacgaaa 248  Q
    || ||||||||||||||||||| |||||||| |||||||    
T  51291290 tgggacatgtggcgtcttctcaccaattttgtgacgaaa 51291252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 55780472 - 55780558
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatg 200  Q
    |||||||||| ||||||||||||| ||||||||| || |  ||||||||| ||||| |  |||| ||||||||||||||||||||||    
T  55780472 atgtttagggaaatatgctcttttgacccctaacctaaggaaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 55780558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 55844652 - 55844738
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatg 200  Q
    |||||||||| ||||||||||||| ||||||||| || |  ||||||||| ||||| |  |||| ||||||||||||||||||||||    
T  55844652 atgtttagggaaatatgctcttttgacccctaacctaaggaaaatatgttttttgaccccttatctttacaaaaagttgcgattatg 55844738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 117 - 232
Target Start/End: Original strand, 4357340 - 4357456
Alignment:
Q  117 tttagggcaatatgctcttttaaccc-ctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttgaga 215  Q
    ||||||| ||||||||||||| |||  |||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||| |  ||||||| ||    
T  4357340 tttagggaaatatgctcttttgaccttctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccctttttttggga 4357439  T
Q  216 catgtggcgtcttctca 232  Q
    ||  |||||||||||||    
T  4357440 cacctggcgtcttctca 4357456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 19232563 - 19232415
Alignment:
Q  114 atgtttagggcaatatgctcttttaac-ccctaacatatgagaaatatgttgtttgaactt-ttatttttacaaaaagttgcgattatggtctctttttt 211  Q
    |||||||||| ||||||||||||| || |||||||||| |  ||||||||| |||  ||   |||| ||||||||||||||||||||||  | ||||| |    
T  19232563 atgtttagggaaatatgctcttttgactccctaacataaggaaaatatgttttttttaccccttatctttacaaaaagttgcgattatgaccccttttct 19232464  T
Q  212 gagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    | |||| ||||| |||||| | ||||||||||| |||||||| ||||||    
T  19232463 gggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaat 19232415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 6789177 - 6789030
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| |||||||| |||  ||| ||||||||  |||||| ||||| ||||| |  |||| |||||||||| |||||||||||  |  |||||||    
T  6789177 atgtttagggaaatatgctgtttcgacctcctaacatgagagaaaaatgttttttgacccgttatctttacaaaaaattgcgattatgcccctttttttg 6789078  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||| | ||||||||||| ||| |||| ||||||    
T  6789077 ggacacgtggcgtcttcttagcaattttgggatgaagggggccaaaat 6789030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 252
Target Start/End: Original strand, 4098741 - 4098882
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgttt-gaacttttatttttacaaaaagttgcgattatggtctctttttt 211  Q
    |||||| ||| ||||||||||||| ||||| ||||||| | |||||||| | ||| || |  |||| ||  ||||||||||| |||| || | |||||||    
T  4098741 atgttttgggaaatatgctcttttgaccccctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcaattaaggcccctttttt 4098840  T
Q  212 gagacatgtggcgtcttctc-acaattttgggacgaaagggg 252  Q
    | |||| |||||||||||||  ||||||||||||||||||||    
T  4098841 gggacacgtggcgtcttctcgtcaattttgggacgaaagggg 4098882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 259
Target Start/End: Complemental strand, 36729237 - 36729160
Alignment:
Q  183 caaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    ||||||||| ||||||||  || ||||||| |||||||||||||||||||  |||||||||| |||||||| ||||||    
T  36729237 caaaaagtttcgattatgaccttttttttgggacatgtggcgtcttctcagtaattttgggatgaaaggggccaaaat 36729160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 41877245 - 41877100
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| |||||  |||||||||||||||  | |||||||     
T  41877245 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttac--aaagttgcgattatgacccctttttta 41877148  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||| ||| |||||||  || |||||||| ||||||    
T  41877147 ggacacgtggcgtcttttcagcaattttttgatgaaaggggccaaaat 41877100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 4433402 - 4433315
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatg 200  Q
    |||||||||| ||||||||||||| ||||| ||||||| |  ||||||||| ||||| |  |||| |||||||||||||| |||||||    
T  4433402 atgtttagggaaatatgctcttttgaccccctaacataaggaaaatatgttttttgaccccttatctttacaaaaagttgtgattatg 4433315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 4433183 - 4433233
Alignment:
Q  32 ggctcaactgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||||||||||||||||| ||||||||| |||||||||||||||||    
T  4433183 ggctaaactgcacttttcgccccctatgtttcataatgttgcgattttggc 4433233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 43793631 - 43793681
Alignment:
Q  32 ggctcaactgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||||||||||||||||| ||||||| |||||||||||||||||||    
T  43793631 ggctaaactgcacttttcgccccctatgttttaaaatgttgcgattttggc 43793681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 4433485 - 4433436
Alignment:
Q  32 ggctcaactgcacttttcgcccctatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||| ||||||||||||||| |||| |||||||||||||||||||    
T  4433485 ggctaaacttcacttttcgcccctaagttttaaaatgttgcgattttggc 4433436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 257
Target Start/End: Original strand, 9397273 - 9397421
Alignment:
Q  111 cccatgtttagggcaatatgctcttttaaccc-ctaacatatgagaaatatgttgtttgaa-cttttatttttacaaaaagttgcgattatggtctcttt 208  Q
    ||||||| ||||| ||||||||||||| |||| ||||||||   |||||||||| ||| || | ||||| ||||||||||||||  ||||||  || |||    
T  9397273 cccatgtatagggaaatatgctcttttgaccctctaacataaaggaaatatgtttttttaaccctttatctttacaaaaagttgtcattatgacct-ttt 9397371  T
Q  209 tttgagacatgtggcgtcttctc-acaattttgggacgaaaggggacaaa 257  Q
    |||  |||| ||| ||| ||||| ||||||||||||| ||||||| ||||    
T  9397372 tttcggacacgtgccgtgttctcaacaattttgggactaaaggggccaaa 9397421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 20919335 - 20919384
Alignment:
Q  32 ggctcaactgcacttttcg-cccctatgtttcaaaatgttgcgattttgg 80  Q
    |||| |||||||||||||| |||||| |||||||||||||||||||||||    
T  20919335 ggctaaactgcacttttcgacccctaagtttcaaaatgttgcgattttgg 20919384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 248
Target Start/End: Complemental strand, 20919481 - 20919417
Alignment:
Q  185 aaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca-caattttgggacgaaa 248  Q
    |||||||| ||||||| || || ||||| |||||||| |||||||||| ||||||||||||||||    
T  20919481 aaaagttgtgattatgatccctcttttgggacatgtgacgtcttctcagcaattttgggacgaaa 20919417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 41877328 - 41877277
Alignment:
Q  32 ggctcaactgcacttttcgccc-ctatgtttcaaaatgttgcgattttggct 82  Q
    |||| |||| |||||||||||| ||| |||||||||||||||||||||||||    
T  41877328 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggct 41877277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 14804465 - 14804551
Alignment:
Q  174 ttatttttacaaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctc-acaattttgggacgaaaggggacaaaat 259  Q
    |||| |||| ||||| ||| ||||||| | ||||||||||||||  |||||| ||||| ||||||||| |||||||| || ||||||    
T  14804465 ttatctttagaaaaacttgtgattatgatatcttttttgagacacatggcgttttctcaacaattttgagacgaaagaggccaaaat 14804551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 81
Target Start/End: Original strand, 15058840 - 15058870
Alignment:
Q  51 cccctatgtttcaaaatgttgcgattttggc 81  Q
    |||||||||||||||||||||||||||||||    
T  15058840 cccctatgtttcaaaatgttgcgattttggc 15058870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 25011735 - 25011785
Alignment:
Q  32 ggctcaactgcacttttcg-cccctatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||| ||||||||| |||||| ||||||||||||||||||||||||    
T  25011735 ggctaaactccacttttcgtcccctaagtttcaaaatgttgcgattttggc 25011785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 25012038 - 25011988
Alignment:
Q  32 ggctcaactgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||||||||||||||||| ||||||||| |||||||| ||||||||    
T  25012038 ggctaaactgcacttttcgccccctatgtttcataatgttgcaattttggc 25011988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 251
Target Start/End: Complemental strand, 25618785 - 25618708
Alignment:
Q  174 ttatttttacaaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca-caattttgggacgaaaggg 251  Q
    |||| |||||||||||| |||||||||| | | |||||| |||| |||||||||||||| ||||||| ||| |||||||    
T  25618785 ttatctttacaaaaagtggcgattatgg-cccctttttgggacacgtggcgtcttctcagcaatttttggatgaaaggg 25618708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 6979314 - 6979355
Alignment:
Q  40 tgcacttttcgcccctatgtttcaaaatgttgcgattttggc 81  Q
    |||||||||| | |||||||||||||| ||||||||||||||    
T  6979314 tgcacttttcactcctatgtttcaaaaggttgcgattttggc 6979355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 79
Target Start/End: Complemental strand, 27018514 - 27018470
Alignment:
Q  37 aactgcacttttcgcccc--tatgtttcaaaatgttgcgattttg 79  Q
    |||||||||| |||||||  |||||||||||||||||||||||||    
T  27018514 aactgcacttctcgcccccctatgtttcaaaatgttgcgattttg 27018470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 35475592 - 35475543
Alignment:
Q  32 ggctcaactgcacttttcg-cccctatgtttcaaaatgttgcgattttgg 80  Q
    |||| |||||||||||| | ||||||||||| ||||||||||||||||||    
T  35475592 ggctaaactgcactttttgtcccctatgttttaaaatgttgcgattttgg 35475543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 4357547 - 4357507
Alignment:
Q  40 tgcacttttcgcccc-tatgtttcaaaatgttgcgattttg 79  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  4357547 tgcacttttcgccccctatatttcaaaatgttgcgattttg 4357507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 5304649 - 5304601
Alignment:
Q  32 ggctcaactgcacttttcgccc-ctatgtttcaaaatgttgcgattttg 79  Q
    |||| |||| |||||||||||| ||| ||||||||||||||||||||||    
T  5304649 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttg 5304601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 13826428 - 13826468
Alignment:
Q  40 tgcacttttcgcccc-tatgtttcaaaatgttgcgattttg 79  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  13826428 tgcacttttcgccccctatgtttaaaaatgttgcgattttg 13826468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 24626222 - 24626270
Alignment:
Q  32 ggctcaactgcacttttcgccc-ctatgtttcaaaatgttgcgattttg 79  Q
    |||| ||||||||||||||||| ||| |||| |||||||||||||||||    
T  24626222 ggctaaactgcacttttcgccctctaagttttaaaatgttgcgattttg 24626270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 3e-30; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 26628244 - 26628097
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||| | ||||||||    
T  26628244 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttttttg 26628145  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||||||| |||||||| ||||||    
T  26628144 ggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaat 26628097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 109 - 257
Target Start/End: Complemental strand, 26633582 - 26633433
Alignment:
Q  109 accccatgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttt 208  Q
    ||||||| ||||||| ||||||||||||| |||||||||||| |||||||||||| ||||| |  |||| ||||||||||||||||||||||| | ||||    
T  26633582 accccatctttagggaaatatgctcttttgacccctaacataagagaaatatgttttttgaccccttatctttacaaaaagttgcgattatggccccttt 26633483  T
Q  209 tttgagacatgtggcgtcttctc-acaattttgggacgaaaggggacaaa 257  Q
    |||| | || |||||  ||||||  ||||||| |||||||||||| ||||    
T  26633482 tttggggcacgtggcaccttctcggcaatttttggacgaaaggggccaaa 26633433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 8339159 - 8339012
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| |||||||| |||| ||| |||||||||  ||||||||| | ||||| |  |||| ||||||||||||||||||||||| ||||||||||    
T  8339159 atgtttagggaaatatgcttttttgacctcctaacataatagaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcctcttttttg 8339060  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||||||| ||| |||| ||||||    
T  8339059 ggacacgtggcgtcttctcagcaattttgggatgaagggggccaaaat 8339012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 28155101 - 28154954
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| || |||| ||||||||||||||||||||||| |  |||||||    
T  28155101 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatggccctttttttg 28155002  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||| ||| |||||||| ||||||    
T  28155001 ggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaat 28154954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 48907511 - 48907364
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| |||| |||||||||||||||||| | ||||||||    
T  48907511 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttaaaaaaagttgcgattatggccccttttttg 48907412  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||||||| |||||||| ||||||    
T  48907411 ggacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaat 48907364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 109 - 248
Target Start/End: Original strand, 3780959 - 3781099
Alignment:
Q  109 accccatgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttt 208  Q
    ||||||||||||||| ||||||||||||| |||||||||||| | |||||||| | ||||| | ||||| ||||||||||||||||| ||||  | ||||    
T  3780959 accccatgtttagggaaatatgctcttttgacccctaacataagggaaatatgctttttgaccctttatctttacaaaaagttgcgaatatgaccccttt 3781058  T
Q  209 tttgagacatgtggcgtcttctca-caattttgggacgaaa 248  Q
    |||| |||| |||| ||||||||| ||||||| ||| ||||    
T  3781059 tttgggacacgtggtgtcttctcagcaattttaggatgaaa 3781099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 10743493 - 10743639
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttga 213  Q
    |||||||||| |||||||||||||||||||||||||| | |||||||||| ||||| |  |||| ||||||||||||||||||||||  | ||||| ||     
T  10743493 atgtttagggaaatatgctcttttaacccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttctgg 10743592  T
Q  214 gacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    | || ||||| |||| | | ||||||||||| |||||||| ||||||    
T  10743593 gtcacgtggcatcttttgagcaattttgggatgaaaggggccaaaat 10743639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 116 - 259
Target Start/End: Complemental strand, 3329030 - 3328885
Alignment:
Q  116 gtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttgag 214  Q
    |||||||| ||||||||||||| ||| ||||||||| | ||||||||   ||||| |  |||| ||||||||||||||||||||||| | |||||||| |    
T  3329030 gtttagggaaatatgctcttttgacctcctaacataagggaaatatgccttttgaccccttatctttacaaaaagttgcgattatggccccttttttggg 3328931  T
Q  215 acatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    ||| |||||||||||||| ||||||| ||| |||||||| ||||||    
T  3328930 acacgtggcgtcttctcagcaatttttggatgaaaggggccaaaat 3328885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 117 - 259
Target Start/End: Original strand, 13080982 - 13081126
Alignment:
Q  117 tttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttgaga 215  Q
    ||||||| ||||||||||||| ||| | ||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||| | |||||||| ||    
T  13080982 tttagggaaatatgctcttttgacctcataacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttttttggga 13081081  T
Q  216 catgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    ||||||| ||||||||| ||||||||||| ||| |||| ||||||    
T  13081082 catgtggagtcttctcagcaattttgggatgaagggggccaaaat 13081126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 4522039 - 4522186
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccct-aacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| || |||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||| | | ||||||||    
T  4522039 atgtttagggaaatatgctcttttgacctcttaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattattgccccttttttg 4522138  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||| ||| |||||||| ||||||    
T  4522139 ggacacgtggcgtcttctcagcaattttaggatgaaaggggccaaaat 4522186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 8542695 - 8542826
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||| ||||||| | ||||||||    
T  8542695 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttg 8542794  T
Q  213 agacatgtggcgtcttctca-caattttggga 243  Q
     |||| |||||||||||||| |||||||||||    
T  8542795 tgacacgtggcgtcttctcagcaattttggga 8542826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 23428838 - 23428691
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||||| ||||||| | |||||||||| ||||| |  |||| ||||||||||||||||||||||  | ||||| ||    
T  23428838 atgtttagggaaatatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttctg 23428739  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| ||||| |||||| | ||||||||||| |||||||| ||||||    
T  23428738 ggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaat 23428691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 25022882 - 25022735
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||||| ||||||| | || ||||||| |||||||  |||| ||||||||||||||||||||||  | ||||| ||    
T  25022882 atgtttagggaaatatgctcttttgaccccataacataagggatatatgttttttgaacccttatctttacaaaaagttgcgattatgaccccttttctg 25022783  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| ||||| |||||| | ||||||||||| |||||||| ||||||    
T  25022782 ggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaat 25022735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 30155364 - 30155217
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||||| ||||| |  |||| ||||||||||||||||||||||| | ||||||||    
T  30155364 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatggccccttttttg 30155265  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     ||||  |||||||||| || |||||||  || |||||||| ||||||    
T  30155264 ggacacatggcgtcttcgcagcaattttttgatgaaaggggccaaaat 30155217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 114 - 252
Target Start/End: Original strand, 25179663 - 25179801
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| |||||| || |||||||||||| ||||| |  |||| ||||||||||||||||||||||| | ||||||||    
T  25179663 atgtttagggaaatatgctcttttgacctcctaacgtaagagaaatatgttttttgaccccttatctttacaaaaagttgcgattatggccccttttttg 25179762  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaagggg 252  Q
     ||||   |||||||||||| ||||||||||| ||| ||||    
T  25179763 ggaca--cggcgtcttctcagcaattttgggatgaaggggg 25179801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 109 - 248
Target Start/End: Complemental strand, 26177180 - 26177039
Alignment:
Q  109 accccatgtttagggcaatatgctcttttaaccc-ctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctctt 207  Q
    |||||||||| |||| |||||||| |||| |||| |||||||| | |||||||| | ||||     |||| ||||||||||||||||||||||| |||||    
T  26177180 accccatgttcagggaaatatgctattttgaccctctaacataggggaaatatgctttttggctcattatctttacaaaaagttgcgattatggcctctt 26177081  T
Q  208 ttttgagacatgtggcgtcttctca-caattttgggacgaaa 248  Q
    ||||| ||| |||||| |||||||| ||||||||||||||||    
T  26177080 ttttgggacttgtggcttcttctcagcaattttgggacgaaa 26177039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 114 - 252
Target Start/End: Complemental strand, 22500814 - 22500674
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||  ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||||| |||||||     
T  22500814 atgtttaggaaaatatgctcttttgacctcctaacataagggaaatatgctttttgatcccttatatttacaaaaagttgcgattatggtcccttttttt 22500715  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaagggg 252  Q
     |||| ||||||||||||||  |||||| ||| ||||||||    
T  22500714 ggacacgtggcgtcttctcagaaatttttggatgaaagggg 22500674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 247
Target Start/End: Complemental strand, 26127130 - 26126990
Alignment:
Q  109 accccatgtttagggcaatatgctcttttaaccc-ctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctctt 207  Q
    ||||||||||||||| |||||| | |||| |||| |||||||| | |||||||| | ||||  |  |||| ||||||||||||||||||||||| |||||    
T  26127130 accccatgtttagggaaatatgttattttgaccctctaacataggggaaatatgctttttggccccttatctttacaaaaagttgcgattatggcctctt 26127031  T
Q  208 ttttgagacatgtggcgtcttctca-caattttgggacgaa 247  Q
    ||||  ||| ||||||||||||||| |||||||| ||||||    
T  26127030 tttttggacttgtggcgtcttctcagcaattttgcgacgaa 26126990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 111 - 264
Target Start/End: Original strand, 23320443 - 23320597
Alignment:
Q  111 cccatgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgtttgaactt-ttatttttacaaaaagttgcgattatggtctctttt 209  Q
    ||||||||||||| ||||||||||||| |||||||||||| ||||| | || | | |  |||| |||| ||  ||||||||||| ||||||| | |||||    
T  23320443 cccatgtttagggaaatatgctcttttgacccctaacataagagaagtctgatatattgacttcttatcttctcaaaaagttgctattatggcccctttt 23320542  T
Q  210 ttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaatcgtaa 264  Q
    | | ||||||||||||||| ||| |||||||||||||||||||| |||||| ||||    
T  23320543 tgg-gacatgtggcgtcttttcagcaattttgggacgaaaggggccaaaattgtaa 23320597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 27852970 - 27852824
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||| | | ||||||    
T  27852970 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgg-cccctttttg 27852872  T
Q  213 agacatgtggcgtcttctc-acaattttgggacgaaaggggacaaaat 259  Q
     |||| ||||||||||||| |||||||||||  ||| |||| ||||||    
T  27852871 ggacacgtggcgtcttctcaacaattttgggctgaagggggccaaaat 27852824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 28173948 - 28173801
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||||| ||||||| | |||||||||| ||||| |  |||| ||||||||||||||||||||||  | ||||| ||    
T  28173948 atgtttagggaaatatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttctg 28173849  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| ||||| |||||  | ||||||||||| |||||||| ||||||    
T  28173848 ggacacgtggcatcttccgagcaattttgggatgaaaggggccaaaat 28173801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 109 - 261
Target Start/End: Complemental strand, 40836403 - 40836248
Alignment:
Q  109 accccatgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttattttt-acaaaaagttgcgattatggtctct 206  Q
    ||||||||||||||| |||||| |||||| ||||| ||| ||| | |||||||||| ||||| |  |||| | | | |||||||||||||||||| | ||    
T  40836403 accccatgtttagggaaatatgttcttttgaccccctaatataagggaaatatgttttttgaccccttatatctcaaaaaaagttgcgattatggcccct 40836304  T
Q  207 tttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaatcg 261  Q
    |||||| |||| |||||| ||||||| ||||||||| |||||||||| ||||||||    
T  40836303 tttttgggacacgtggcggcttctcagcaattttggaacgaaaggggccaaaatcg 40836248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 174 - 273
Target Start/End: Complemental strand, 20626880 - 20626780
Alignment:
Q  174 ttatttttacaaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaatcgtaacattttga 272  Q
    |||| ||||||||||||| ||||||||    |||||||| ||||||||||||||||| | |||||||||  ||||||||| |||||||||||||||||||    
T  20626880 ttatctttacaaaaagttacgattatgactccttttttgggacatgtggcgtcttcttaacaattttggagcgaaaggggccaaaatcgtaacattttga 20626781  T
Q  273 a 273  Q
    |    
T  20626780 a 20626780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 259
Target Start/End: Complemental strand, 32960800 - 32960715
Alignment:
Q  174 ttatttttacaaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    |||| ||||||||||||||||||||||| || ||||||| |||| ||||||||||||||  |||||||||| |||||||| ||||||    
T  32960800 ttatctttacaaaaagttgcgattatggcct-ttttttgggacacgtggcgtcttctcagtaattttgggatgaaaggggccaaaat 32960715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 116 - 259
Target Start/End: Complemental strand, 34878746 - 34878601
Alignment:
Q  116 gtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttgag 214  Q
    |||||||| ||||||||||||| ||||| ||| ||| | |||||||| | ||||| |  |||| ||||||||||||| | |||||||   |||||||| |    
T  34878746 gtttagggaaatatgctcttttgaccccctaatataagggaaatatgctttttgatcccttatctttacaaaaagtttcaattatggcaccttttttggg 34878647  T
Q  215 acatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    ||| |||||||||||||| |||||||| || |||| ||| ||||||    
T  34878646 acacgtggcgtcttctcagcaattttgagatgaaatgggtcaaaat 34878601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 46673266 - 46673119
Alignment:
Q  114 atgtttagggcaatatgctcttttaac-ccctaacatatgagaaatatgttgtttgaacttttatttttac-aaaaagttgcgattatggtctctttttt 211  Q
    |||||||||| ||||||||||||| || |||||||||| | |||||||||| ||||| |  |||| ||||| |||||||||||||||||  | ||||| |    
T  46673266 atgtttagggaaatatgctcttttgactccctaacataagggaaatatgtt-tttgaccccttatctttacaaaaaagttgcgattatgaccccttttct 46673168  T
Q  212 gagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
      |||| ||||| |||||| | ||||||||||| |||||||| ||||||    
T  46673167 aggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaat 46673119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 252
Target Start/End: Original strand, 6927596 - 6927695
Alignment:
Q  154 gaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca-caattttgggacgaaagggg 252  Q
    |||||||||| ||||| |  |||| ||||||||||||||||||||||  | |||||||| |||| ||||| |||||| | ||||||||||| ||||||||    
T  6927596 gaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttttgggacacgtggcatcttctgagcaattttgggatgaaagggg 6927695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 43668574 - 43668641
Alignment:
Q  174 ttatttttacaaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca-caattttg 240  Q
    |||||||||||||||||||||||||||  | || ||||| ||||||||||||||||||| ||||||||    
T  43668574 ttatttttacaaaaagttgcgattatgacccctgttttgggacatgtggcgtcttctcagcaattttg 43668641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 22416480 - 22416566
Alignment:
Q  174 ttatttttacaaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctc-acaattttgggacgaaaggggacaaaat 259  Q
    |||| ||||||||||||||| ||||||  | ||| |||| |||| ||||||||||||| |||||||||||||||| |||| ||||||    
T  22416480 ttatctttacaaaaagttgcaattatgaccccttatttgggacacgtggcgtcttctcaacaattttgggacgaagggggccaaaat 22416566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 20002011 - 20001962
Alignment:
Q  32 ggctcaactgcacttttcgcccctatgtttcaaaatgttgcgattttggc 81  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||||||||    
T  20002011 ggctaaactgcacttttctcccctaagtttcaaaatgttgcgattttggc 20001962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 259
Target Start/End: Complemental strand, 31039182 - 31039049
Alignment:
Q  128 atgctcttttaacccctaacatatgagaaatatgttgtt-tgaacttttatttttacaaaaagttgcgattatggtctcttttttgagacatgtggcgtc 226  Q
    |||||||||| |||||||||||||| |||||||| | |  ||| | ||||| ||   |||||||||||||||| | | |||||||   ||||||||||||    
T  31039182 atgctcttttgacccctaacatatgggaaatatgatctaatgaccctttatcttcttaaaaagttgcgattatagccccttttttagaacatgtggcgtc 31039083  T
Q  227 ttctca-caattttgggacgaaaggggacaaaat 259  Q
    |||||| ||||||| ||||||||| || ||||||    
T  31039082 ttctcagcaatttttggacgaaagaggccaaaat 31039049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 248
Target Start/End: Original strand, 3821027 - 3821103
Alignment:
Q  173 tttatttttacaaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca-caattttgggacgaaa 248  Q
    ||||| ||||||||||||||||||||||  | |||||||| ||||||||| ||||||||| ||||||| ||| ||||    
T  3821027 tttatctttacaaaaagttgcgattatgaccccttttttgggacatgtggtgtcttctcagcaattttaggatgaaa 3821103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 114 - 209
Target Start/End: Original strand, 48860787 - 48860883
Alignment:
Q  114 atgtttagggcaatatgctcttttaaccc-ctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctctttt 209  Q
    |||||||||| |||||||| |||| |||  |||||||| | |||||||||| ||||| |  |||| |||||||||||||||||||||| || |||||    
T  48860787 atgtttagggaaatatgctattttgaccttctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgatccctttt 48860883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 26633361 - 26633408
Alignment:
Q  32 ggctcaactgcacttttcgcccctatgtttcaaaatgttgcgattttg 79  Q
    |||| |||||||||||||||||||| |||| |||||||||||||||||    
T  26633361 ggctaaactgcacttttcgcccctaagttttaaaatgttgcgattttg 26633408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 115 - 259
Target Start/End: Complemental strand, 33279803 - 33279657
Alignment:
Q  115 tgtttagggcaatatgctctttt-aacccctaacatatgagaaatatg-ttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    ||||||||  ||||||||||||| | ||||||||||| | |||||||| |  ||||| |  |||| ||||| ||||||| ||||||||  |  |||||||    
T  33279803 tgtttaggaaaatatgctcttttgaccccctaacataagggaaatatgctcttttgatcccttatatttac-aaaagttacgattatgaccctttttttg 33279705  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    ||||| |||||||||||||| ||||||| |||| ||||||| ||||||    
T  33279704 agacacgtggcgtcttctcagcaatttttggaccaaaggggtcaaaat 33279657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 22447740 - 22447790
Alignment:
Q  32 ggctcaactgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||||||||||||||||| |||||||||||||||||| ||||||||    
T  22447740 ggctaaactgcacttttcgccccctatgtttcaaaatgttgcaattttggc 22447790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 22447963 - 22447840
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttattt----ttacaaaaagttgcgattatggtctcttt 208  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| |    |||||||||||||||||||||| | ||||    
T  22447963 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatatatctttacaaaaagttgcgattatggccccttt 22447864  T
Q  209 tttgagacatgtggcgtcttctca 232  Q
    |||  || | ||||||||||||||    
T  22447863 ttttggatacgtggcgtcttctca 22447840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 34878529 - 34878579
Alignment:
Q  32 ggctcaactgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||||||||| ||||||| |||||||||||||||||||||||||||    
T  34878529 ggctaaactgcacttctcgccccctatgtttcaaaatgttgcgattttggc 34878579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 8338948 - 8338988
Alignment:
Q  40 tgcacttttcgcccc-tatgtttcaaaatgttgcgattttg 79  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  8338948 tgcacttttcgccccctatgtttcaaaatgttgcgattttg 8338988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 13080894 - 13080945
Alignment:
Q  32 ggctcaactgcacttttcgccc-ctatgtttcaaaatgttgcgattttggct 82  Q
    |||| |||| |||||||||||| ||| |||||||||||||||||||||||||    
T  13080894 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggct 13080945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 20001794 - 20001941
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||||| ||||||| | |||||||| | | |   |  |||| ||  ||||||||||||| ||||| | || |||||    
T  20001794 atgtttagggaaatatgctcttttgaccccctaacataagggaaatatgatctcttgccccttatattctcaaaaagttgcgactatggcccctgttttg 20001893  T
Q  213 agacatgtggcgtcttctc-acaattttgggacgaaaggggacaaaat 259  Q
      ||| ||||||||||||| |||||||||||| |||| ||| ||||||    
T  20001894 gaacacgtggcgtcttctcaacaattttgggatgaaaaggggcaaaat 20001941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 3328813 - 3328863
Alignment:
Q  32 ggctcaactgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||||||||||||||||| |||||||||||||||| | ||||||||    
T  3328813 ggctaaactgcacttttcgccccctatgtttcaaaatgttacaattttggc 3328863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 3329117 - 3329067
Alignment:
Q  32 ggctcaactgcacttttcgccc-ctatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||| |||||||||||| ||| ||||||||||||||||||||||||    
T  3329117 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggc 3329067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 13081186 - 13081148
Alignment:
Q  44 cttttcgcc-cctatgtttcaaaatgttgcgattttggc 81  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  13081186 cttttcgcctcctatgtttcaaaatgttgcgattttggc 13081148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 22500596 - 22500646
Alignment:
Q  32 ggctcaactgcacttttcg-cccctatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||||||||||||| ||||||||||||||||| |||| ||||||||    
T  22500596 ggctaaactgcacttttcggcccctatgtttcaaaatattgcaattttggc 22500646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 25179871 - 25179829
Alignment:
Q  40 tgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    ||||||||||||||| ||||||||||||||||||||| |||||    
T  25179871 tgcacttttcgccccctatgtttcaaaatgttgcgatattggc 25179829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 25336358 - 25336416
Alignment:
Q  32 ggctcaactgcacttttcgcccct-atgtttcaaaatgttgcgattttggcttcttatt 89  Q
    |||| ||||||||||||||||||| |  |||||||||||||| |||||||| |||||||    
T  25336358 ggctaaactgcacttttcgccccttaaatttcaaaatgttgcaattttggcctcttatt 25336416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 26628025 - 26628075
Alignment:
Q  32 ggctcaactgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||| ||||||||||||| |||||||||||||||||| ||||||||    
T  26628025 ggctaaactacacttttcgccccctatgtttcaaaatgttgcaattttggc 26628075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 28154882 - 28154932
Alignment:
Q  32 ggctcaactgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||| ||||||||||||| |||||||||||||||||| ||||||||    
T  28154882 ggctaaactacacttttcgccccctatgtttcaaaatgttgcaattttggc 28154932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 28173737 - 28173779
Alignment:
Q  40 tgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    ||||||||||||||| ||||||||| |||||||||||||||||    
T  28173737 tgcacttttcgccccctatgtttcataatgttgcgattttggc 28173779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 32960645 - 32960695
Alignment:
Q  32 ggctcaactgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    |||| ||||||| |||||||||| |||||||||||||||||| ||||||||    
T  32960645 ggctaaactgcatttttcgccccctatgtttcaaaatgttgcaattttggc 32960695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 36311152 - 36311202
Alignment:
Q  32 ggctcaactgcacttttcg-cccctatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||||||||||||| |||||| |||| |||||||||||||||||||    
T  36311152 ggctaaactgcacttttcgtcccctaagttttaaaatgttgcgattttggc 36311202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 48907595 - 48907545
Alignment:
Q  32 ggctcaactgcacttttcgccc-ctatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||| |||||||||||| ||| ||||||||||||||||||||||||    
T  48907595 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggc 48907545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 1743553 - 1743504
Alignment:
Q  32 ggctcaactgcacttttcgc-ccctatgtttcaaaatgttgcgattttgg 80  Q
    |||| ||||||||||||||| ||||| |||| ||||||||||||||||||    
T  1743553 ggctaaactgcacttttcgctccctaagttttaaaatgttgcgattttgg 1743504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Original strand, 32315105 - 32315142
Alignment:
Q  214 gacatgtggcgtcttctc-acaattttgggacgaaagg 250  Q
    |||||||||||||||||| |||||||||||||||||||    
T  32315105 gacatgtggcgtcttctcaacaattttgggacgaaagg 32315142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 163
Target Start/End: Original strand, 33105022 - 33105075
Alignment:
Q  110 ccccatgtttagggcaatatgctcttttaacccctaacatatgagaaatatgtt 163  Q
    |||||||||||||| ||||||||||||| | | ||| |||| ||||||||||||    
T  33105022 ccccatgtttagggaaatatgctcttttgatctctatcataagagaaatatgtt 33105075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 259
Target Start/End: Original strand, 36311306 - 36311383
Alignment:
Q  183 caaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    |||| ||||||||||| || |  | ||||| |||| ||||| |||||||| |||||||||||||||||||| ||||||    
T  36311306 caaatagttgcgattacggcccatattttgggacacgtggcttcttctcaacaattttgggacgaaaggggccaaaat 36311383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 49657770 - 49657811
Alignment:
Q  37 aactgcacttttcgcccctatgtttcaaaatgttgcgatttt 78  Q
    ||||||||||||| |||||| |||||||||||||| ||||||    
T  49657770 aactgcacttttcacccctacgtttcaaaatgttgtgatttt 49657811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 10743699 - 10743663
Alignment:
Q  43 acttttcgcccctatgtttcaaaatgttgcgattttg 79  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  10743699 actttccgcccctatgtttcataatgttgcgattttg 10743663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 183 - 258
Target Start/End: Original strand, 25336511 - 25336587
Alignment:
Q  183 caaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaa 258  Q
    ||||||||||||||||| | |||| |||||||||||| | |||||| ||| ||||||||  ||||||| || |||||    
T  25336511 caaaaagttgcgattattgcctctgttttgagacatgcgacgtcttttcagcaattttgatacgaaagaggccaaaa 25336587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 3e-30; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 38716278 - 38716425
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| |||||||||| | ||||| |  |||| ||||||||||||||||||||||| | ||||||||    
T  38716278 atgtttagggaaatatgctcttttgacctcctaacataagagaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttttttg 38716377  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||| ||| |||||||| ||||||    
T  38716378 ggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaat 38716425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 30714493 - 30714346
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||| ||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| |||||||||||||| |||||||| | ||||||||    
T  30714493 atgtttcgggaaatatgctcttttgacctcctaacataagggaaatatgctttttgacccgttatctttacaaaaagttgtgattatggccccttttttg 30714394  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     ||||||||||||||||||| ||||||||||| |||||||| ||||||    
T  30714393 ggacatgtggcgtcttctcagcaattttgggatgaaaggggccaaaat 30714346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 251
Target Start/End: Original strand, 11175992 - 11176131
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| |||||||||||||| |||||||| | ||||||||    
T  11175992 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgtgattatggccccttttttg 11176091  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggg 251  Q
     |||| |||||||||||||| ||||||||||| |||||||    
T  11176092 ggacacgtggcgtcttctcagcaattttgggatgaaaggg 11176131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 15735149 - 15735296
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||| ||| ||||||||||||| ||| | ||||||| | |||||||||  ||||| |  |||| ||||||||||||||||||||||| | ||||||||    
T  15735149 atgttttgggaaatatgctcttttgacctcgtaacataagggaaatatgtattttgaccccttatctttacaaaaagttgcgattatggccccttttttg 15735248  T
Q  213 agacatgtggcgtcttctc-acaattttgggacgaaaggggacaaaat 259  Q
     |||| ||||||||||||| |||||||||||| |||||||| ||||||    
T  15735249 ggacacgtggcgtcttctcaacaattttgggatgaaaggggccaaaat 15735296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 2986771 - 2986918
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||| | |||||||     
T  2986771 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttttttt 2986870  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     ||||  ||||||||||||| ||||||||||| ||| |||| ||||||    
T  2986871 ggacacatggcgtcttctcagcaattttgggatgaagggggccaaaat 2986918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 9051246 - 9051100
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| || |||| ||||||||||||||||||||||| | ||||||||    
T  9051246 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatgg-cccttttttg 9051148  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| | |||||||||||| |||||||| || ||| |||| ||||||    
T  9051147 ggacacggggcgtcttctcagcaattttgagatgaagggggccaaaat 9051100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 9787644 - 9787791
Alignment:
Q  114 atgtttagggcaatatgctcttttaaccc-ctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| |||  |||||||| | |||||||| | ||||| |  |||| ||||||||||||| ||||||||| | ||||||||    
T  9787644 atgtttagggaaatatgctcttttgacctgctaacataagggaaatatgctttttgaccccttatctttacaaaaagttacgattatggccccttttttg 9787743  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||| ||| |||||||| ||||||    
T  9787744 ggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaat 9787791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 113 - 257
Target Start/End: Complemental strand, 22387288 - 22387141
Alignment:
Q  113 catgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatgg-tctcttttt 210  Q
    ||||||||| | ||||||||||||| ||||| |||||||||||||||||||| ||||| |  |||| | |||||| ||||| ||||||||  | ||||||    
T  22387288 catgtttagtgaaatatgctcttttgaccccctaacatatgagaaatatgttttttgaccccttatctatacaaagagttgtgattatggcccccttttt 22387189  T
Q  211 tgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaa 257  Q
    || |||| |||||||||||||| |||||||| ||||||||||| ||||    
T  22387188 tgggacaagtggcgtcttctcagcaattttgagacgaaaggggtcaaa 22387141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 25299020 - 25298873
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccct-aacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| || ||||||   |||||||||| ||||| |  |||| ||||||||||||||||||||||| | ||||||||    
T  25299020 atgtttagggaaatatgctcttttgacctcttaacataaaggaaatatgttttttgatcccttatctttacaaaaagttgcgattatggccccttttttg 25298921  T
Q  213 agacatgtggcgtcttctc-acaattttgggacgaaaggggacaaaat 259  Q
     |||| ||||| ||||||| |||||||||||| ||| |||| ||||||    
T  25298920 ggacacgtggcatcttctcaacaattttgggatgaagggggccaaaat 25298873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 15700832 - 15700979
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||| ||| ||||||||||||| ||||| ||||||| | |||||||||| ||||| |  |||| ||||||||||||||||||||||  | ||||| ||    
T  15700832 atgtttcgggaaatatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttctg 15700931  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| ||||| |||||| | ||||||||||| |||||||| ||||||    
T  15700932 ggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaat 15700979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 6763936 - 6763805
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| |  ||||||| | ||||| |  |||| |||||||||||| ||||||| || | ||||||||    
T  6763936 atgtttagggaaatatgctcttttgacctcctaacataaggaaaatatgctttttgaccccttatctttacaaaaagtagcgattacggccccttttttg 6763837  T
Q  213 agacatgtggcgtcttctca-caattttggga 243  Q
     |||| |||||||||||||| |||||||||||    
T  6763836 ggacacgtggcgtcttctcagcaattttggga 6763805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 18538047 - 18537900
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| |||||||| |||| ||| | ||||||  | |||||||| | ||||| |  |||| ||||||||||||||| ||||||| | ||||||||    
T  18538047 atgtttagggaaatatgcttttttgacctcataacattagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttg 18537948  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||| ||| |||||||| ||||||    
T  18537947 ggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaat 18537900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 127 - 259
Target Start/End: Original strand, 17368314 - 17368448
Alignment:
Q  127 tatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttgagacatgtggcgt 225  Q
    ||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||| ||||||| | |||||||| |||| |||||||    
T  17368314 tatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttgggacacgtggcgt 17368413  T
Q  226 cttctc-acaattttgggacgaaaggggacaaaat 259  Q
    |||||| ||| |||| ||| |||||||| ||||||    
T  17368414 cttctcaacattttttggatgaaaggggccaaaat 17368448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 22191131 - 22191277
Alignment:
Q  114 atgtttagggcaatatgctcttttaac-ccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||  ||||||||| | ||||||||   ||||| |  |||| ||||||||||||| ||||||| | | ||||||||    
T  22191131 atgtttagggaaatatgctcttttgacttcctaacataagggaaatatgccttttgaccccttatctttacaaaaagttacgattat-gacccttttttg 22191229  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||| ||||||| ||||||||||| |||||||| ||||||    
T  22191230 ggacacgtggcgccttctcagcaattttgggatgaaaggggccaaaat 22191277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 4587946 - 4588033
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatg 200  Q
    |||||||||| ||||||||||||| ||||| ||||||| | |||||||||| ||| | |  |||| ||||||||||||||||||||||    
T  4587946 atgtttagggaaatatgctcttttgaccccctaacataagggaaatatgttttttaaccccttatctttacaaaaagttgcgattatg 4588033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 259
Target Start/End: Complemental strand, 4104982 - 4104896
Alignment:
Q  174 ttatttttacaaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    |||| ||||||||||||||||||||||  | |||||| |  ||| |||||||||||||| |||||||||||||||| ||| ||||||    
T  4104982 ttatatttacaaaaagttgcgattatgacccctttttaggaacacgtggcgtcttctcagcaattttgggacgaaatgggtcaaaat 4104896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 117 - 259
Target Start/End: Original strand, 28365598 - 28365742
Alignment:
Q  117 tttagggcaatatgctcttttaacccctaacatatgagaaatatgttgtttgaactt-ttatttttacaaaaagttgcgattatggtctcttttttgaga 215  Q
    ||||||| ||||||||| ||| |||||||||||  | |||||||| | ||| |||   |||| ||  ||||||||||||||||||  |  ||||||| ||    
T  28365598 tttagggaaatatgctcgtttgacccctaacatgagggaaatatgatcttttaaccccttatcttctcaaaaagttgcgattatgaccctttttttggga 28365697  T
Q  216 catgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    |   ||||||||||||| |||||||||||||||||||| ||||||    
T  28365698 cgcatggcgtcttctcagcaattttgggacgaaagggggcaaaat 28365742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 248
Target Start/End: Original strand, 36464352 - 36464493
Alignment:
Q  109 accccatgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaactt-ttatttttacaaaaagttgcgattatggtctct 206  Q
    ||||||||||||||| |||||| |||||| ||||| ||||||| | |||||||  | |||  |||  |||| ||  |||||||||||||| |||| | ||    
T  36464352 accccatgtttagggaaatatgatcttttgaccccctaacataagggaaatataatcttttgactccttatcttctcaaaaagttgcgat-atggcccct 36464450  T
Q  207 tttttgagacatgtggcgtcttctca-caattttgggacgaaa 248  Q
    ||||||||||| ||| | |||||||| ||||||||||||||||    
T  36464451 tttttgagacacgtgacatcttctcagcaattttgggacgaaa 36464493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 79
Target Start/End: Complemental strand, 36464570 - 36464527
Alignment:
Q  37 aactgcacttttcgcc-cctatgtttcaaaatgttgcgattttg 79  Q
    |||||||||||||||| |||| ||||||||||||||||||||||    
T  36464570 aactgcacttttcgcctcctaagtttcaaaatgttgcgattttg 36464527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 200
Target Start/End: Original strand, 331795 - 331885
Alignment:
Q  112 ccatgtttagggcaatatgctcttttaaccc-ctaacatatgagaaatatg-ttgtttgaacttttatttttacaaaaagttgcgattatg 200  Q
    |||||||||||| ||||||||||||| |||| ||||| || | |||||||| || ||||| |  |||| ||| ||||||||||||||||||    
T  331795 ccatgtttagggaaatatgctcttttgaccctctaacttaagggaaatatgcttttttgatccattatctttgcaaaaagttgcgattatg 331885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 11175907 - 11175957
Alignment:
Q  32 ggctcaactgcacttttcgccc-ctatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||| |||||||||||| ||| ||||||||||||||||||||||||    
T  11175907 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggc 11175957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 18538132 - 18538082
Alignment:
Q  32 ggctcaactgcacttttcgccc-ctatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||| |||||||||||| ||| ||||||||||||||||||||||||    
T  18538132 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggc 18538082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 25298809 - 25298851
Alignment:
Q  40 tgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    ||||||||||||||| ||||||| |||||||||||||||||||    
T  25298809 tgcacttttcgccccctatgttttaaaatgttgcgattttggc 25298851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 30714283 - 30714325
Alignment:
Q  40 tgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    ||||||||||||||| ||||||| |||||||||||||||||||    
T  30714283 tgcacttttcgccccctatgttttaaaatgttgcgattttggc 30714325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 12350164 - 12350236
Alignment:
Q  183 caaaaagttgcgatta--tggtctcttttttgagacatgtggcgtcttctca-caattttgggacgaaagggg 252  Q
    ||||||||||||||||  || |||||||||||  |||||||||||||| |||  ||||||| |||||||||||    
T  12350164 caaaaagttgcgattaaatgatctcttttttggaacatgtggcgtcttgtcagtaattttgagacgaaagggg 12350236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 15735064 - 15735113
Alignment:
Q  32 ggctcaactgcacttttcgccc-ctatgtttcaaaatgttgcgattttgg 80  Q
    |||| |||| |||||||||||| ||| |||||||||||||||||||||||    
T  15735064 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttgg 15735113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 18537829 - 18537878
Alignment:
Q  32 ggctcaactgcacttttcg-cccctatgtttcaaaatgttgcgattttgg 80  Q
    |||| |||||||||||||| ||||||||||| |||||||||| |||||||    
T  18537829 ggctaaactgcacttttcgtcccctatgttttaaaatgttgcaattttgg 18537878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 28365806 - 28365765
Alignment:
Q  39 ctgcacttttcgcccctatgtttcaaaatgttgcgattttgg 80  Q
    |||||||||||| ||||| ||||||||||||||| |||||||    
T  28365806 ctgcacttttcgaccctaagtttcaaaatgttgcaattttgg 28365765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 4587870 - 4587910
Alignment:
Q  42 cacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  4587870 cacttttcgccccctaagtttcaaaatgttgcgattttggc 4587910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 11176203 - 11176163
Alignment:
Q  40 tgcacttttcgcc-cctatgtttcaaaatgttgcgattttg 79  Q
    ||||||||| ||| |||||||||||||||||||||||||||    
T  11176203 tgcacttttggcctcctatgtttcaaaatgttgcgattttg 11176163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 15701042 - 15701002
Alignment:
Q  40 tgcacttttcgcccc-tatgtttcaaaatgttgcgattttg 79  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  15701042 tgcacttttcgccccctatgtttcataatgttgcgattttg 15701002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 17368508 - 17368468
Alignment:
Q  42 cacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    ||||||||||||| |||||||||||||||||| ||||||||    
T  17368508 cacttttcgccccctatgtttcaaaatgttgcaattttggc 17368468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 22191344 - 22191300
Alignment:
Q  37 aactgcacttttcgcc-cctatgtttcaaaatgttgcgattttgg 80  Q
    |||| ||||||||||| |||||||||||||||||||| |||||||    
T  22191344 aactacacttttcgcctcctatgtttcaaaatgttgcaattttgg 22191300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 38716496 - 38716448
Alignment:
Q  32 ggctcaactgcacttttcgcc-cctatgtttcaaaatgttgcgattttg 79  Q
    |||| ||||||||||||| || |||||||||||||||||||| ||||||    
T  38716496 ggctaaactgcacttttcacctcctatgtttcaaaatgttgcaattttg 38716448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 19368 - 19514
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttga 213  Q
    |||||||||| ||||||||||||| |||||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||| | ||||||||     
T  19368 atgtttagggaaatatgctcttttgacccctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttttttgg 19467  T
Q  214 gacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    |||| |||||||||||||| ||||||| ||| |||| ||| ||||||    
T  19468 gacacgtggcgtcttctcagcaatttttggatgaaatgggccaaaat 19514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 61899 - 62048
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatgg--tctcttttt 210  Q
    |||||||||| ||||||||||||| ||  ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||| |||||||   || |||||    
T  61899 atgtttagggaaatatgctcttttgacatcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttt 61998  T
Q  211 tgagacatgtggcgtcttctc-acaattttgggacgaaaggggacaaaat 259  Q
    || |||| ||||||||||||| |||||||| ||| |||||||| ||||||    
T  61999 tgggacacgtggcgtcttctcaacaatttttggatgaaaggggccaaaat 62048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 7e-28; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 19195432 - 19195285
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| |||| |||||||| ||| ||||||||| | |||||||||| ||||| |  |||| |||||||||||||| |||||||| | ||||||||    
T  19195432 atgtttagggaaatacgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgtgattatggccccttttttg 19195333  T
Q  213 agacatgtggcgtcttctc-acaattttgggacgaaaggggacaaaat 259  Q
     |||||||||||||||||| |||||||| ||| |||||||| ||||||    
T  19195332 ggacatgtggcgtcttctcaacaatttttggatgaaaggggccaaaat 19195285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 21224571 - 21224424
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||| |  |||||||    
T  21224571 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccctttttttg 21224472  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    ||||| |||||||||||||| ||||||| ||| |||||||| ||||||    
T  21224471 agacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaat 21224424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 48176181 - 48176035
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttga 213  Q
    |||||||||| ||||||||||||| |||||||||||| | |||||||||| ||||| |  |||| ||||||||||||||||||||||  | ||||| ||     
T  48176181 atgtttagggaaatatgctcttttgacccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttctgg 48176082  T
Q  214 gacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    |||| ||||| |||||| | ||||||||||| |||||||| ||||||    
T  48176081 gacacgtggcatcttctgagcaattttgggatgaaaggggccaaaat 48176035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 24597734 - 24597603
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||||| ||||| |  || | ||||||||||||||||||||||| | ||| ||||    
T  24597734 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttctctttacaaaaagttgcgattatggccccttgtttg 24597635  T
Q  213 agacatgtggcgtcttctca-caattttggga 243  Q
    ||||| |||||||||||||| |||||||||||    
T  24597634 agacacgtggcgtcttctcagcaattttggga 24597603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 36746722 - 36746575
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| ||||||||||   ||| | |  |||| ||||||||||||||||||||||  | ||||||||    
T  36746722 atgtttagggaaatatgctcttttgacctcctaacataagagaaatatgccttttaaccccttatctttacaaaaagttgcgattatgaccccttttttg 36746623  T
Q  213 agacatgtggcgtcttctc-acaattttgggacgaaaggggacaaaat 259  Q
     |||| ||||||||||||| |||||||||||| |||||||| ||||||    
T  36746622 ggacacgtggcgtcttctcaacaattttgggatgaaaggggccaaaat 36746575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 13578004 - 13577858
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttga 213  Q
    ||||||| || ||||||||||||| |||||||||||| | |||||||| | ||||| | ||||| | ||||||||||||  ||||||| | ||||||||     
T  13578004 atgtttaaggaaatatgctcttttgacccctaacataagggaaatatgctttttgaccctttatctatacaaaaagttgaaattatggccccttttttgg 13577905  T
Q  214 gacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     ||| |||||||||||||| ||||||||||| |||||||| ||||||    
T  13577904 aacacgtggcgtcttctcagcaattttgggatgaaaggggccaaaat 13577858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 114 - 257
Target Start/End: Original strand, 2331098 - 2331243
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | |||||    |||| ||||||||||||||||||||||| || |||||||    
T  2331098 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgactccttatctttacaaaaagttgcgattatggcctattttttg 2331197  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaa 257  Q
     |||| |||||||||||||| ||||||| ||| |||||||| ||||    
T  2331198 ggacaagtggcgtcttctcagcaatttttggatgaaaggggccaaa 2331243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 27869414 - 27869283
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||| | ||||||||    
T  27869414 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttttttg 27869315  T
Q  213 agacatgtggcgtcttctca-caattttggga 243  Q
     ||||  ||||||||||||| |||||||||||    
T  27869314 ggacacatggcgtcttctcagcaattttggga 27869283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 31493995 - 31494142
Alignment:
Q  114 atgtttagggcaatatgctcttttaaccc-ctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| |||| |||||||| |  ||||||| | ||||| |  |||| ||||||||||||||||||||||| | ||||||||    
T  31493995 atgtttagggaaatatgctcttttgaccctctaacataaggaaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttttttg 31494094  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
      ||| |||||||||||||| ||||||| ||| |||||||| ||||||    
T  31494095 gaacacgtggcgtcttctcagcaattttaggatgaaaggggccaaaat 31494142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 113 - 260
Target Start/End: Complemental strand, 44078091 - 44077941
Alignment:
Q  113 catgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttac-aaaaagttgcgattatggtctcttttt 210  Q
    ||||||||||| ||||||||||||| ||| ||||||||| |||||||||||| ||||| |  |||| ||||| |||||||||||||||||   || ||||    
T  44078091 catgtttagggaaatatgctcttttgacctcctaacataagagaaatatgttttttgaccccttatctttacaaaaaagttgcgattatgacatcctttt 44077992  T
Q  211 tgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaatc 260  Q
    || ||||  ||||||||||| | |||||||||||||||||||  |||||||    
T  44077991 tgggacacatggcgtcttcttagcaattttgggacgaaagggaccaaaatc 44077941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 106 - 257
Target Start/End: Original strand, 14624680 - 14624832
Alignment:
Q  106 gtaaccccatgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctc 205  Q
    ||||||| |||||||||  ||||||||||||| |||| ||||||| | |||||||  | ||||| | ||||| ||||||||||||||| ||||||| | |    
T  14624680 gtaacccaatgtttaggaaaatatgctcttttgacccataacataagggaaatatactttttgaccctttatctttacaaaaagttgcaattatggcccc 14624779  T
Q  206 ttttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaa 257  Q
    ||||||| |||| ||||| | |||||| |||||||||||| ||| ||| ||||    
T  14624780 ttttttgggacacgtggcatgttctcagcaattttgggacaaaatgggtcaaa 14624832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 114 - 251
Target Start/End: Original strand, 17305849 - 17305989
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatg-gtctctttttt 211  Q
    |||||||||  ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  ||||||||||||||||||| |||||||   | |||||||    
T  17305849 atgtttaggaaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatttttacaaaaagttgtgattatgaccccctttttt 17305948  T
Q  212 gagacatgtggcgtcttctca-caattttgggacgaaaggg 251  Q
    | ||||||||||||||||||| ||||||||||| |||||||    
T  17305949 gggacatgtggcgtcttctcatcaattttgggatgaaaggg 17305989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 3562652 - 3562533
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||| | |||||||     
T  3562652 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggcccctttttta 3562553  T
Q  213 agacatgtggcgtcttctca 232  Q
     |||| ||||||||||||||    
T  3562552 ggacacgtggcgtcttctca 3562533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 20636704 - 20636835
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||  | ||||||||    
T  20636704 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccccttttttg 20636803  T
Q  213 agacatgtggcgtcttctca-caattttggga 243  Q
     |||| ||||||| |||||| |||||||||||    
T  20636804 ggacacgtggcgttttctcagcaattttggga 20636835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 35337741 - 35337622
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||  | ||||||||    
T  35337741 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccccttttttg 35337642  T
Q  213 agacatgtggcgtcttctca 232  Q
     |||| ||||||||||||||    
T  35337641 ggacacgtggcgtcttctca 35337622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 42271417 - 42271564
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||| |  |||||||    
T  42271417 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatgtttacaaaaagttgcgattatggccctttttttg 42271516  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
      ||| |||||||||||||| ||||||| ||| ||| |||| ||||||    
T  42271517 gaacacgtggcgtcttctcagcaattttcggatgaagggggccaaaat 42271564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 183 - 252
Target Start/End: Original strand, 6650665 - 6650735
Alignment:
Q  183 caaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca-caattttgggacgaaagggg 252  Q
    ||||||||||||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||    
T  6650665 caaaaagttgcgattatggcccctgttttgagacatgtggcgtcttctcatcaattttgggacgaaagggg 6650735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 11843396 - 11843250
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttga 213  Q
    |||||||||| ||||||||||||| |||||||||||| |  ||||||| | ||||| |  ||||  |||||||||||||| ||||||| | |||||||      
T  11843396 atgtttagggaaatatgctcttttgacccctaacataaggaaaatatgctttttgaccccttatccttacaaaaagttgcaattatggcccctttttttg 11843297  T
Q  214 gacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     | | |||||||||||||| ||||||||||| |||||||| ||||||    
T  11843296 aatacgtggcgtcttctcagcaattttgggatgaaaggggccaaaat 11843250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 15681785 - 15681867
Alignment:
Q  183 caaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaatcgtaa 264  Q
    ||||||||||||||||||| |||||||||| |||| ||||||||||||||  ||||||||||||||||||| |||||| ||||    
T  15681785 caaaaagttgcgattatggcctcttttttgggacacgtggcgtcttctcataaattttgggacgaaaggggccaaaattgtaa 15681867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 259
Target Start/End: Original strand, 4193637 - 4193782
Alignment:
Q  116 gtttagggcaatatgctcttttaacccctaacatatgagaaatatg-ttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttgag 214  Q
    |||||||| ||||||||||||| |||| ||||||| |||||||||| |  ||||| |  |||| ||| ||||||||||| ||||||| | ||||||||||    
T  4193637 gtttagggaaatatgctcttttgacccttaacataagagaaatatgatcttttgaccccttatcttttcaaaaagttgcaattatggccccttttttgag 4193736  T
Q  215 acatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    ||| ||| |||||| ||| ||||||||| | |||||||| ||||||    
T  4193737 acacgtgacgtcttttcagcaattttggaaggaaaggggccaaaat 4193782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 113 - 259
Target Start/End: Original strand, 26385345 - 26385493
Alignment:
Q  113 catgtttagggcaatatgctcttttaacccctaacatatgagaaatatg-ttgtttgaacttttatttttacaaaaagttgcgattatggtctctttttt 211  Q
    ||||||||||| |||||||| |||| |||||||||||| |||||||||| |  ||||| || |||| ||  ||||||||||||||||||| |  | ||||    
T  26385345 catgtttagggaaatatgctattttgacccctaacataagagaaatatgatattttgacctcttatcttctcaaaaagttgcgattatggcccatgtttt 26385444  T
Q  212 gagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    | ||||||||||||||| | | ||||||| |||| ||||||| ||||||    
T  26385445 gggacatgtggcgtcttattagcaattttaggacaaaaggggccaaaat 26385493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 41452468 - 41452321
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||| ||||| | ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||  | ||||||||    
T  41452468 atgtttagggaaatatactcttctgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccccttttttg 41452369  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| ||| |||||||||| ||||||| ||| |||||||| ||||||    
T  41452368 ggacacgtgtcgtcttctcagcaatttttggatgaaaggggccaaaat 41452321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 174 - 259
Target Start/End: Original strand, 5087142 - 5087228
Alignment:
Q  174 ttatttttacaaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    |||| ||| |||||||||||||||||| || || ||||| |||| |||||||||||||| |||||||||||||||||||| ||||||    
T  5087142 ttatcttttcaaaaagttgcgattatgatccctattttgggacacgtggcgtcttctcatcaattttgggacgaaaggggccaaaat 5087228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 111 - 273
Target Start/End: Original strand, 3769486 - 3769650
Alignment:
Q  111 cccatgtttagggcaatatgctcttttaacccct-aacatatgagaaatatgttgtttgaacttttatttttac-aaaaagttgcgattatggtctcttt 208  Q
    ||||||||||| | |||||||| |||| |||||| ||||||||||||||||| | ||||| || |||| ||||| ||||||||||||||||| || | ||    
T  3769486 cccatgtttagagaaatatgcttttttgaccccttaacatatgagaaatatgctttttgatctcttatctttacaaaaaagttgcgattatgatc-cctt 3769584  T
Q  209 tttgagacatgtggcgtcttctc-acaattttgggacgaaaggggacaaaatcgtaacattttgaa 273  Q
    || | |||||||||| ||||||| ||||||||   ||||||| ||  ||||||| |||||| ||||    
T  3769585 ttcgggacatgtggcatcttctcaacaattttaaaacgaaagaggcaaaaatcgcaacattgtgaa 3769650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 114 - 270
Target Start/End: Complemental strand, 21225766 - 21225610
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttga 213  Q
    |||||||||| ||||||||||||| |||||||||||| | |||||||| | ||||| |  |  | ||||||||||||||||||||| | |  |||||||     
T  21225766 atgtttagggaaatatgctcttttgacccctaacataagggaaatatgctatttgacccctcgtctttacaaaaagttgcgattat-gaccattttttgg 21225668  T
Q  214 gacatgtggcgtcttctc-acaattttgggacgaaaggggacaaaatcgtaacatttt 270  Q
     ||| ||| ||||||||| |||||||| |||||||||||  |||||||  ||||||||    
T  21225667 aacacgtgacgtcttctcaacaattttaggacgaaagggaccaaaatcacaacatttt 21225610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 39182015 - 39182166
Alignment:
Q  109 accccatgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgttt-gaacttttatttttacaaaaagttgcgattatggtctctt 207  Q
    ||||||||||||||| ||||||||||||| |||  ||||||| | |||||||| | ||| || |  |||| ||  ||||||||||||||||||| ||||     
T  39182015 accccatgtttagggaaatatgctcttttgacca-taacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcgattatggcctctg 39182113  T
Q  208 ttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    ||||| |||| |||| || |||||| |||||||||||| ||||||| ||||||    
T  39182114 ttttgggacacgtggtgttttctcagcaattttgggacaaaaggggccaaaat 39182166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 8526881 - 8527011
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||  ||||||||| ||| ||| ||||||||| | |||||||| | ||||| |  | |||||||||||||||||| ||||||| | ||||||||    
T  8526881 atgtttaggaaaatatgctcatttgacctcctaacataagggaaatatgctttttgacccct-atttttacaaaaagttgcaattatggccccttttttg 8526979  T
Q  213 agacatgtggcgtcttctca-caattttggga 243  Q
    ||||| ||||| |||||||| |||||||||||    
T  8526980 agacacgtggcatcttctcagcaattttggga 8527011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 10655415 - 10655561
Alignment:
Q  114 atgtttagggcaatatgctcttttaa-cccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||||| ||||||| ||| ||||||||| || ||| | |  |||| ||||||||||||||||||||||  |  |||| ||    
T  10655415 atgtttagggaaatatgctcttttaatcccctaatataagagaaatatttt-tttaaccccttatctttacaaaaagttgcgattatgacccattttctg 10655513  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| ||||| |||||| | ||||||||||| |||||||| ||||||    
T  10655514 ggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaat 10655561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 24464655 - 24464808
Alignment:
Q  109 accccatgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgttt-gaacttttatttttacaaaaagttgcgattatggtctct 206  Q
    ||||||||||||||| |||||| |||||| ||||| ||||||| | |||||||| | ||| || |  |||| ||  ||||| |||||||||||||||  |    
T  24464655 accccatgtttagggaaatatgttcttttgaccccctaacataagggaaatatgatcttttgaccccttatcttctcaaaatgttgcgattatggtcatt 24464754  T
Q  207 tttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     ||||| ||||||||||||||||||| ||||||| | | ||| |||||||||||    
T  24464755 gttttgtgacatgtggcgtcttctcagcaattttagaatgaagggggacaaaat 24464808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 10024003 - 10023857
Alignment:
Q  114 atgtttagggcaatatgctctttt-aacccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| | ||||| ||||| |  |||||| || ||||| |  |||| ||||||||||||||||| ||||| | | ||||||    
T  10024003 atgtttagggaaatatgctcttttgacccccttacataaggaaaatattttttttgaccccttatctttacaaaaagttgcgaatatgg-cccctttttg 10023905  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||| ||||||||| |||||||| ||| ||||||| ||||||    
T  10023904 ggacacgtggtgtcttctcagcaattttgagacaaaaggggccaaaat 10023857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 18754485 - 18754398
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatg 200  Q
    |||||||||| ||||||||||||| ||||| ||||||| | |||||||||| ||||| |  |||| ||||||||| ||||||||||||    
T  18754485 atgtttagggaaatatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaatgttgcgattatg 18754398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 243
Target Start/End: Complemental strand, 19919825 - 19919691
Alignment:
Q  110 ccccatgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttt 208  Q
    |||||||||||||  ||||||||||||| ||| ||||||||| |  ||||||||| ||||| |  |||| |||||||||||||| |||||| | | ||||    
T  19919825 ccccatgtttagga-aatatgctcttttgacctcctaacataaggaaaatatgttttttgaccccttatctttacaaaaagttgtgattatagccccttt 19919727  T
Q  209 tttgagacatgtggcgtcttctca-caattttggga 243  Q
    |||| |||| || |||| |||||| |||||||||||    
T  19919726 tttgggacacgtagcgttttctcagcaattttggga 19919691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 200
Target Start/End: Original strand, 20638576 - 20638663
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatg 200  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||    
T  20638576 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 20638663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 3403200 - 3403118
Alignment:
Q  183 caaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaatcgtaa 264  Q
    |||||| |||||||||||  | |||||||| |||||||||||||| ||||  ||||||||||||||||||| |||||| ||||    
T  3403200 caaaaacttgcgattatgaccacttttttgggacatgtggcgtctcctcaggaattttgggacgaaaggggccaaaattgtaa 3403118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 11843178 - 11843229
Alignment:
Q  32 ggctcaactgcacttttcgcccc-tatgtttcaaaatgttgcgattttggct 82  Q
    |||| |||||||||| ||||||| ||||||||||||||||||||||||||||    
T  11843178 ggctaaactgcacttctcgccccctatgtttcaaaatgttgcgattttggct 11843229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 3562441 - 3562483
Alignment:
Q  40 tgcacttttcgc-ccctatgtttcaaaatgttgcgattttggc 81  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  3562441 tgcacttttcgctccctatgtttcaaaatgttgcgattttggc 3562483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 10655632 - 10655586
Alignment:
Q  32 ggctcaactgcacttttcgcccctatgtttcaaaatgttgcgatttt 78  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||    
T  10655632 ggctaaactgcacttttcgcctctatgtttcaaaatgttgcaatttt 10655586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 183 - 259
Target Start/End: Original strand, 7365378 - 7365455
Alignment:
Q  183 caaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    ||||||||||||||||| | |||| ||||| |||| ||| | |||||||| |||||||||||||||| ||| ||||||    
T  7365378 caaaaagttgcgattattgcctctgttttgggacacgtgacatcttctcagcaattttgggacgaaaagggccaaaat 7365455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 36746806 - 36746757
Alignment:
Q  32 ggctcaactgcacttttcgcccctatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||| |||||||||||||||||||| |||||||||| ||||||||    
T  36746806 ggctaaactacacttttcgcccctatgttttaaaatgttgcaattttggc 36746757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 5111519 - 5111623
Alignment:
Q  109 accccatgtttagggcaatatgctcttttaacccctaacatatgagaaatatg-ttgtttgaacttttatttttacaaaaagttgcgattatggtctctt 207  Q
    ||||||||||||||  |||||| |||||| |||||||||||| | |||||||| |  ||||| |  |||| ||  ||||||||||||||||||| | |||    
T  5111519 accccatgtttaggaaaatatgttcttttgacccctaacataagggaaatatgatattttgaccccttatcttctcaaaaagttgcgattatggcccctt 5111618  T
Q  208 ttttg 212  Q
    |||||    
T  5111619 ttttg 5111623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 259
Target Start/End: Original strand, 5348184 - 5348260
Alignment:
Q  184 aaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    ||||||||||||||||||   || ||||| || ||||| |||||||||| ||||||||||||||||| || ||||||    
T  5348184 aaaaagttgcgattatggctcctgttttgggatatgtgacgtcttctcagcaattttgggacgaaagaggtcaaaat 5348260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 259
Target Start/End: Original strand, 19493399 - 19493550
Alignment:
Q  109 accccatgtttagggcaatatgctcttttaacccctaacatatgagaaatatg-ttgtttgaacttttatttttacaaaaagttgcgattatggtctctt 207  Q
    |||||||||||| || |||||||| |||| ||||| |||||| |  ||||||| || ||||| | ||||| ||  ||||||| || |||||||| | ||     
T  19493399 accccatgtttatggaaatatgctattttgaccccaaacataaggaaaatatgattttttgaccctttatcttctcaaaaag-tgtgattatggcccctg 19493497  T
Q  208 ttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    ||||  |||| |||||||||||||| | ||||||||| |||||||| ||||||    
T  19493498 ttttaggacacgtggcgtcttctcagccattttgggatgaaaggggccaaaat 19493550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 20636914 - 20636874
Alignment:
Q  40 tgcacttttcgcccc-tatgtttcaaaatgttgcgattttg 79  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  20636914 tgcacttttcgccccctatgtttcaaaatgttgcgattttg 20636874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 21224354 - 21224402
Alignment:
Q  32 ggctcaactgcacttttcgcccctatgtttcaaaatgttgcgattttgg 80  Q
    |||| ||||||| ||||||||| |||||||||||||||||| |||||||    
T  21224354 ggctaaactgcatttttcgcccttatgtttcaaaatgttgcaattttgg 21224402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 27869204 - 27869244
Alignment:
Q  40 tgcacttttcgcccc-tatgtttcaaaatgttgcgattttg 79  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  27869204 tgcacttttcgccccctatgtttcaaaatgttgcgattttg 27869244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 111 - 201
Target Start/End: Original strand, 26126336 - 26126427
Alignment:
Q  111 cccatgtttagggcaatatgctcttttaacccctaacatatgagaaatatg-ttgtttgaacttttatttttacaaaaagttgcgattatgg 201  Q
    ||||||||||||| |||||||| |||| |||||||||||| | |||||||| |  ||||| |  |||| ||  |||||||||||||||||||    
T  26126336 cccatgtttagggaaatatgcttttttgacccctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcgattatgg 26126427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 8527090 - 8527048
Alignment:
Q  40 tgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    ||||||||||||||| ||| |||||||||||||||||||||||    
T  8527090 tgcacttttcgccccctatatttcaaaatgttgcgattttggc 8527048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 9822248 - 9822179
Alignment:
Q  183 caaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca-caattttgggacgaaagggg 252  Q
    ||||||||||||||||||  | |||||| | ||||  ||||||||||||| ||||||||||||||||||||    
T  9822248 caaaaagttgcgattatgacccctttttgg-gacacatggcgtcttctcagcaattttgggacgaaagggg 9822179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 252
Target Start/End: Complemental strand, 10724173 - 10724104
Alignment:
Q  183 caaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca-caattttgggacgaaagggg 252  Q
    ||||||||||||||||||  | |||||| | ||||  ||||||||||||| ||||||||||||||||||||    
T  10724173 caaaaagttgcgattatgacccctttttgg-gacacatggcgtcttctcagcaattttgggacgaaagggg 10724104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 15681934 - 15681884
Alignment:
Q  32 ggctcaactgcacttttcg-cccctatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||||||||||| | |||||| ||||||||||||||||||||||||    
T  15681934 ggctaaactgcacttttagacccctaagtttcaaaatgttgcgattttggc 15681884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 24597525 - 24597567
Alignment:
Q  40 tgcacttttcgcc-cctatgtttcaaaatgttgcgattttggc 81  Q
    ||||||||||||| ||||||||||||||||||| |||||||||    
T  24597525 tgcacttttcgcctcctatgtttcaaaatgttgtgattttggc 24597567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 31494214 - 31494164
Alignment:
Q  32 ggctcaactgcacttttcgccc-ctatgtttcaaaatgttgcgattttggc 81  Q
    |||| ||||||| ||||||| | ||||||||||||||||||||||||||||    
T  31494214 ggctaaactgcatttttcgcactctatgtttcaaaatgttgcgattttggc 31494164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 143
Target Start/End: Complemental strand, 33237638 - 33237604
Alignment:
Q  109 accccatgtttagggcaatatgctcttttaacccc 143  Q
    ||||||||||||||||||||||||||||| |||||    
T  33237638 accccatgtttagggcaatatgctcttttcacccc 33237604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 46267394 - 46267348
Alignment:
Q  184 aaaaagttgcgattatggtctcttttttgagacatgtggcgtcttct 230  Q
    |||||||||||||||||| | |||||||| ||||||||||| |||||    
T  46267394 aaaaagttgcgattatggccccttttttgggacatgtggcggcttct 46267348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 2331322 - 2331273
Alignment:
Q  32 ggctcaactgcacttttcgcccc-tatgtttcaaaatgttgcgattttgg 80  Q
    |||| |||||||||||||||||| ||||||| |||||||||| |||||||    
T  2331322 ggctaaactgcacttttcgccccctatgttttaaaatgttgcaattttgg 2331273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 13577792 - 13577837
Alignment:
Q  37 aactgcacttttcgccc-ctatgtttcaaaatgttgcgattttggc 81  Q
    |||||||||| |||| | ||||||||||||||||||||||||||||    
T  13577792 aactgcacttctcgctctctatgtttcaaaatgttgcgattttggc 13577837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 150
Target Start/End: Original strand, 25002787 - 25002828
Alignment:
Q  109 accccatgtttagggcaatatgctcttttaacccctaacata 150  Q
    ||||||||||||||| || |||||||||| ||||||||||||    
T  25002787 accccatgtttagggaaacatgctcttttgacccctaacata 25002828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 17306055 - 17306019
Alignment:
Q  45 ttttcgcccctatgtttcaaaatgttgcgattttggc 81  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  17306055 ttttcgcccctatgttttaaaatgttgcaattttggc 17306019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 18754565 - 18754521
Alignment:
Q  37 aactgcacttttcgcccc-tatgtttcaaaatgttgcgattttgg 80  Q
    |||| ||||||||||||| || |||||||||||||||||||||||    
T  18754565 aactccacttttcgccccctaagtttcaaaatgttgcgattttgg 18754521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 19919905 - 19919857
Alignment:
Q  32 ggctcaactgcacttttcgccc-ctatgtttcaaaatgttgcgattttg 79  Q
    |||| |||| |||||||||||| ||| ||||||||||||||||||||||    
T  19919905 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttg 19919857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 21224656 - 21224608
Alignment:
Q  32 ggctcaactgcacttttcgccc-ctatgtttcaaaatgttgcgattttg 79  Q
    |||| |||| |||||||||||| ||| ||||||||||||||||||||||    
T  21224656 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttg 21224608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 21264276 - 21264156
Alignment:
Q  114 atgtttagggcaatatgctcttttaaccc-ctaacatatgagaaatatg-ttgtttgaacttttatttttacaaaaagttgcgattatggtctctttttt 211  Q
    |||||||||| |||||||| |||| | || |||||| | |||||||||  || ||||| ||||||| |||| |||||  || |||| ||| | || ||||    
T  21264276 atgtttagggaaatatgctattttgatcctctaacagaagagaaatatacttttttgaccttttatctttataaaaaactgtgattgtggaccctatttt 21264177  T
Q  212 gagacatgtggcgtcttctca 232  Q
    |||||||||| ||||||||||    
T  21264176 gagacatgtgacgtcttctca 21264156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 80
Target Start/End: Complemental strand, 27869494 - 27869450
Alignment:
Q  37 aactgcacttttcgccc-ctatgtttcaaaatgttgcgattttgg 80  Q
    |||| |||||||||||| ||| |||||||||||||||||||||||    
T  27869494 aacttcacttttcgccctctaagtttcaaaatgttgcgattttgg 27869450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 251
Target Start/End: Complemental strand, 33237561 - 33237493
Alignment:
Q  184 aaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca-caattttgggacgaaaggg 251  Q
    ||||||||| |||||||  | || ||||| |||| |||||||||||||| ||||||||||| |||||||    
T  33237561 aaaaagttgtgattatgaccactgttttgggacacgtggcgtcttctcagcaattttgggatgaaaggg 33237493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 7e-28; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 24051093 - 24051240
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| |||||||||  | ||||| |  |||| ||||||||||||||||||||||  ||||||||||    
T  24051093 atgtttagggaaatatgctcttttgacctcctaacataagagaaatatactttttgaccccttatatttacaaaaagttgcgattatgacctcttttttg 24051192  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||||||| |||| ||| ||||||    
T  24051193 ggacacgtggcgtcttctcatcaattttgggatgaaatgggccaaaat 24051240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 114 - 257
Target Start/End: Original strand, 22269492 - 22269636
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttga 213  Q
    |||||||||| |||||| |||||| |||| ||||||| | |||||||||| ||||| |  |||| |||||||||||||| | |||||| | ||||||||     
T  22269492 atgtttagggaaatatgttcttttgacccttaacataagggaaatatgttttttgaccccttatctttacaaaaagttgtgtttatggccccttttttgg 22269591  T
Q  214 gacatgtggcgtcttctc-acaattttgggacgaaaggggacaaa 257  Q
    |||| ||||||||||||| ||||||||| ||||||||||| ||||    
T  22269592 gacacgtggcgtcttctcaacaattttgagacgaaaggggccaaa 22269636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 125 - 259
Target Start/End: Original strand, 32451822 - 32451958
Alignment:
Q  125 aatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttgagacatgtggc 223  Q
    ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||  | |||||||||||||||||||    
T  32451822 aatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccccttttttgagacatgtggc 32451921  T
Q  224 gtcttctc-acaattttgggacgaaaggggacaaaat 259  Q
    |||||||| |||||||| ||| |||||||| ||||||    
T  32451922 gtcttctcaacaatttttggatgaaaggggccaaaat 32451958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 35102710 - 35102563
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||| ||||||| | ||||||||    
T  35102710 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcaattatggccccttttttg 35102611  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||||||| ||| |||| ||||||    
T  35102610 ggacacgtggcgtcttctcagcaattttgggatgaagggggccaaaat 35102563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 114 - 240
Target Start/End: Original strand, 15298570 - 15298697
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| |  ||||||||| ||||| |  |||| ||||||||||||||||||||||||| ||||||||    
T  15298570 atgtttagggaaatatgctcttttgacctcctaacataaggaaaatatgttttttgatcccttatctttacaaaaagttgcgattatggtc-cttttttg 15298668  T
Q  213 agacatgtggcgtcttctca-caattttg 240  Q
     |||| |||||||||||||| ||||||||    
T  15298669 ggacaagtggcgtcttctcagcaattttg 15298697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 228
Target Start/End: Complemental strand, 4597624 - 4597509
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||||| ||||| |  |||| ||||||||||||||| ||||||| | ||||||||    
T  4597624 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcaattatggccccttttttg 4597525  T
Q  213 agacatgtggcgtctt 228  Q
     |||||||||||||||    
T  4597524 ggacatgtggcgtctt 4597509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 18791442 - 18791589
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||||| ||||||| | |||||||| | ||||| |  | || ||||||||||||||||||||||| | |||||||     
T  18791442 atgtttagggaaatatgctcttttgaccccctaacataagggaaatatgctttttgacccctcatctttacaaaaagttgcgattatggcccctttttta 18791541  T
Q  213 agacatgtggcgtcttctc-acaattttgggacgaaaggggacaaaat 259  Q
     |||| ||||||||||||| |||||||||||| ||| |||| ||||||    
T  18791542 ggacacgtggcgtcttctcaacaattttgggatgaagggggccaaaat 18791589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 34834010 - 34834141
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||||| ||||| |  |||| ||||||||||||| | ||||||| | ||||||||    
T  34834010 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgacccgttatctttacaaaaagttacaattatggccccttttttg 34834109  T
Q  213 agacatgtggcgtcttctca-caattttggga 243  Q
     |||| |||||||||||||| |||||||||||    
T  34834110 ggacacgtggcgtcttctcagcaattttggga 34834141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 114 - 257
Target Start/End: Original strand, 24603446 - 24603591
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||| | |||||||     
T  24603446 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatggccccttttttt 24603545  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaa 257  Q
     ||||  ||||||||||||| ||||||||||| ||| |||| ||||    
T  24603546 ggacacatggcgtcttctcagcaattttgggatgaagggggccaaa 24603591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 114 - 264
Target Start/End: Original strand, 3118764 - 3118916
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||||| ||||||| | |||||||||| ||||| || |||| |||||||||| |||||||||||  | ||||| ||    
T  3118764 atgtttagggaaatatgctcttttgaccccctaacataagggaaatatgttttttgacctcttatctttacaaaaatttgcgattatgaccccttttctg 3118863  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaatcgtaa 264  Q
     |||| ||| | |||||| | ||||||||||| |||||||| |||||| ||||    
T  3118864 ggacacgtgacatcttctgatcaattttgggatgaaaggggccaaaattgtaa 3118916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 259
Target Start/End: Complemental strand, 24615917 - 24615765
Alignment:
Q  109 accccatgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatg-gtctctt 207  Q
    |||||| | |||||| ||||||||||||| ||||||||||||||||||||||| | ||||| |  || | ||||| ||||||||||||||||   ||  |    
T  24615917 accccacgattagggaaatatgctcttttgacccctaacatatgagaaatatgctttttgacccattctctttactaaaagttgcgattatgacccttat 24615818  T
Q  208 ttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    ||||| |||||||||||| |||||| ||||||| ||||||||| || ||||||    
T  24615817 ttttgggacatgtggcgttttctcagcaatttttggacgaaagaggccaaaat 24615765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 14572397 - 14572250
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||  ||||||||| | |||||||| | ||||| |  |||| |||| |||||||||||||||||| |  |||||||    
T  14572397 atgtttagggaaatatgctcttttgacatcctaacataagggaaatatgctttttgaccccttatctttataaaaagttgcgattatggccctttttttg 14572298  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||||||||| |||||||| ||||||| ||| |||||||| ||||||    
T  14572297 ggacatgtggcatcttctcagcaatttttggatgaaaggggccaaaat 14572250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 114 - 232
Target Start/End: Complemental strand, 26710526 - 26710407
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| |  ||||||||| ||||| |  |||| ||||||||||||||||||||||| | ||||||||    
T  26710526 atgtttagggaaatatgctcttttgacctcctaacataaggaaaatatgttttttgaccccttatctttacaaaaagttgcgattatggccccttttttg 26710427  T
Q  213 agacatgtggcgtcttctca 232  Q
     |||| ||||| ||||||||    
T  26710426 ggacacgtggcatcttctca 26710407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 31210879 - 31211026
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||  ||||||||||||| ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||| |   ||||||||    
T  31210879 atgtttaggaaaatatgctcttttgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatagcaccttttttg 31210978  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||| ||||||||| ||||||||||| |||||||| ||||||    
T  31210979 ggacacgtggtgtcttctcagcaattttgggatgaaaggggccaaaat 31211026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 22968373 - 22968228
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||||| ||||||| | |||||||||| ||||| | || || ||||||||||||||||||||| | | ||||| ||    
T  22968373 atgtttagggaaatatgctcttttgaccccctaacataagggaaatatgttttttgaccctt-atctttacaaaaagttgcgattat-gacccttttctg 22968276  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    ||||| ||| | |||||| | ||||||||||| |||||||| ||||||    
T  22968275 agacacgtgacatcttctgagcaattttgggatgaaaggggccaaaat 22968228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 23820020 - 23820165
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||||| ||||||| | |||||||||| ||||| | || || ||||||||||||||||||||| | | ||||| ||    
T  23820020 atgtttagggaaatatgctcttttgaccccctaacataagggaaatatgttttttgaccctt-atctttacaaaaagttgcgattat-gacccttttctg 23820117  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    ||||| ||| | |||||| | ||||||||||| |||||||| ||||||    
T  23820118 agacacgtgacatcttctgagcaattttgggatgaaaggggccaaaat 23820165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 114 - 232
Target Start/End: Original strand, 25819769 - 25819888
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||| ||||| | ||| ||||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||  | ||||||||    
T  25819769 atgtttagggaaatatactcttctgacctcctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccccttttttg 25819868  T
Q  213 agacatgtggcgtcttctca 232  Q
     |||| ||||||||||||||    
T  25819869 ggacacgtggcgtcttctca 25819888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 114 - 222
Target Start/End: Original strand, 8412843 - 8412952
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||| | ||||||||||||| ||||| ||||||| | |||||||||| ||||| |  |||| ||||||||||||||||||||||  | ||||||||    
T  8412843 atgtttagagaaatatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttttg 8412942  T
Q  213 agacatgtgg 222  Q
     |||| ||||    
T  8412943 ggacacgtgg 8412952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 20863886 - 20863811
Alignment:
Q  174 ttatttttacaaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca-caattttgggacgaaa 248  Q
    |||| ||||||||||||||||||||||| | |||||||| ||||  ||||||||||||| ||||||||| ||||||    
T  20863886 ttatctttacaaaaagttgcgattatggccccttttttgggacacatggcgtcttctcagcaattttggaacgaaa 20863811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 112 - 259
Target Start/End: Original strand, 4370981 - 4371124
Alignment:
Q  112 ccatgtttagggcaatatgctcttttaacccctaacatatgagaaatatg-ttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttt 210  Q
    |||||||||||| ||||||||||||| |||||||||||| | |||||||| |  ||||| |  |||| ||||||||||||||||| |      | |||||    
T  4370981 ccatgtttagggaaatatgctcttttgacccctaacataagggaaatatgctcctttgaccccttatctttacaaaaagttgcgact------ttttttt 4371074  T
Q  211 tgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    || ||||| |||||| |||||| |||||||| || |||||||| ||||||    
T  4371075 tgggacatatggcgttttctcagcaattttgagatgaaaggggccaaaat 4371124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 259
Target Start/End: Original strand, 34528303 - 34528380
Alignment:
Q  183 caaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    |||||||||||||||||||   || ||||| ||||||||  ||||||||| |||||||||||||||||||| ||||||    
T  34528303 caaaaagttgcgattatggcgactgttttgggacatgtgatgtcttctcagcaattttgggacgaaaggggccaaaat 34528380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 23124878 - 23124804
Alignment:
Q  174 ttatttttacaaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca-caattttgggacgaa 247  Q
    |||| ||||||||||||||||||||||  | ||||||   ||||||||||||||||||| ||| |||||||||||    
T  23124878 ttatctttacaaaaagttgcgattatgacccctttttgaggacatgtggcgtcttctcagcaagtttgggacgaa 23124804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 4013964 - 4013919
Alignment:
Q  37 aactgcacttttcg-cccctatgtttcaaaatgttgcgattttggc 81  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||    
T  4013964 aactgcacttttcgtcccctaagtttcaaaatgttgcgattttggc 4013919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 4597413 - 4597454
Alignment:
Q  40 tgcacttttcgcccc-tatgtttcaaaatgttgcgattttgg 80  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  4597413 tgcacttttcgccccctatgtttcaaaatgttgcgattttgg 4597454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 144 - 259
Target Start/End: Complemental strand, 18749284 - 18749168
Alignment:
Q  144 taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca-caattttggg 242  Q
    ||||||| | |||||||| | ||||| |  |||| |||||||||||||| |||||||  | |||||||| |||||||||| |||||| | ||||||| |     
T  18749284 taacataagggaaatatgctttttgaccccttatctttacaaaaagttgtgattatgtccccttttttgggacatgtggcttcttcttatcaatttttgt 18749185  T
Q  243 acgaaaggggacaaaat 259  Q
    | |||||||| ||||||    
T  18749184 atgaaaggggccaaaat 18749168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 14194456 - 14194495
Alignment:
Q  40 tgcacttttcgcccctatgtttcaaaatgttgcgattttg 79  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  14194456 tgcacttttcacccctatgttttaaaatgttgcgattttg 14194495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 40 - 78
Target Start/End: Original strand, 35102499 - 35102538
Alignment:
Q  40 tgcacttttcgcccc-tatgtttcaaaatgttgcgatttt 78  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  35102499 tgcacttttcgccccctatgtttcaaaatgttgcgatttt 35102538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 15298780 - 15298738
Alignment:
Q  40 tgcacttttcgccc-ctatgtttcaaaatgttgcgattttggc 81  Q
    |||| ||||||||| ||||||||||||||||||||||||||||    
T  15298780 tgcatttttcgccctctatgtttcaaaatgttgcgattttggc 15298738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 18749097 - 18749147
Alignment:
Q  32 ggctcaactgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||||||||||||||||| ||||||| |||||||||| ||||||||    
T  18749097 ggctaaactgcacttttcgccccttatgttttaaaatgttgcaattttggc 18749147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 24051009 - 24051059
Alignment:
Q  32 ggctcaactgcacttttcgccc-ctatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||| |||||||||||| ||| ||||||||||||||||||||||||    
T  24051009 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggc 24051059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 26710611 - 26710561
Alignment:
Q  32 ggctcaactgcacttttcgccc-ctatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||| |||||||||||| ||| ||||||||||||||||||||||||    
T  26710611 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttggc 26710561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 35102767 - 35102717
Alignment:
Q  32 ggctcaactgcacttttcgccc-ctatgtttcaaaatgttgcgattttggc 81  Q
    ||||||||| |||||||||||| ||| ||||||||||||||| ||||||||    
T  35102767 ggctcaacttcacttttcgccctctaagtttcaaaatgttgcaattttggc 35102717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 14572183 - 14572228
Alignment:
Q  37 aactgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    |||||||||||||||||| ||||||| |||||||||| ||||||||    
T  14572183 aactgcacttttcgccccctatgttttaaaatgttgcaattttggc 14572228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 76
Target Start/End: Original strand, 32682381 - 32682418
Alignment:
Q  40 tgcacttttcgcccc-tatgtttcaaaatgttgcgatt 76  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  32682381 tgcacttttcgccccctatgtttcaaaatgttgcgatt 32682418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 18749432 - 18749384
Alignment:
Q  32 ggctcaactgcacttttcgccc-ctatgtttcaaaatgttgcgattttg 79  Q
    |||| |||| |||||||||||| ||| ||||||||||||||||||||||    
T  18749432 ggctaaacttcacttttcgccctctaagtttcaaaatgttgcgattttg 18749384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 18791654 - 18791611
Alignment:
Q  40 tgcacttttcg--cccctatgtttcaaaatgttgcgattttggc 81  Q
    |||||||||||  ||||||||||| |||||||||||||||||||    
T  18791654 tgcacttttcgtccccctatgttttaaaatgttgcgattttggc 18791611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 22968447 - 22968407
Alignment:
Q  42 cacttttcgcccct-atgtttcaaaatgttgcgattttggc 81  Q
    |||||||||||||| | ||||||||||||||||||||||||    
T  22968447 cacttttcgccccttaagtttcaaaatgttgcgattttggc 22968407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 23819946 - 23819986
Alignment:
Q  42 cacttttcgcccct-atgtttcaaaatgttgcgattttggc 81  Q
    |||||||||||||| | ||||||||||||||||||||||||    
T  23819946 cacttttcgccccttaagtttcaaaatgttgcgattttggc 23819986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 32452030 - 32451982
Alignment:
Q  32 ggctcaactgcacttttcg-cccctatgtttcaaaatgttgcgattttg 79  Q
    |||| |||||||||||| | |||||||||||||||||||||| ||||||    
T  32452030 ggctaaactgcactttttgtcccctatgtttcaaaatgttgcaattttg 32451982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 2268 - 2121
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | | |||||| | ||||| |  |||| ||||||||||||||||||||||  | ||||||||    
T  2268 atgtttagggaaatatgctcttttgacctcctaacataagggcaatatgctttttgaccccttatctttacaaaaagttgcgattatgaccccttttttg 2169  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||| ||| |||||||| ||||||    
T  2168 ggacacgtggcgtcttctcagcaatttttggatgaaaggggccaaaat 2121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 2048 - 2098
Alignment:
Q  32 ggctcaactgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||||||||||||||||| ||||||| |||||||||| ||||||||    
T  2048 ggctaaactgcacttttcgccccctatgttttaaaatgttgcaattttggc 2098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 243
Target Start/End: Complemental strand, 5868 - 5738
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||||| ||||| |  |||| ||||||||||||||||||||||| | ||||||||    
T  5868 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgg-cccttttttg 5770  T
Q  213 agacatgtggcgtcttctca-caattttggga 243  Q
     |||| ||||||||||| || |||||||||||    
T  5769 ggacacgtggcgtcttcgcagcaattttggga 5738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0179; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 5650 - 5700
Alignment:
Q  32 ggctcaactgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||||||||||||||||| |||||||||||||||| | ||||||||    
T  5650 ggctaaactgcacttttcgccccctatgtttcaaaatgttacaattttggc 5700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 56; Significance: 4e-23; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 142166 - 142019
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||| ||||||||| | |||||||| | ||||| || |||| ||||||||||||||||||||||| |  |||||||    
T  142166 atgtttagggaaatatgctcttttgacctcctaacataagggaaatatgctttttgacctcttatctttacaaaaagttgcgattatggcccattttttg 142067  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||| | |||||||  || |||||||| ||||||    
T  142066 ggacacgtggcgtcttctaagcaatttttagatgaaaggggccaaaat 142019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 141945 - 142003
Alignment:
Q  32 ggctcaactgcacttttcg-cccctatgtttcaaaatgttgcgattttggcttcttatt 89  Q
    |||| |||||||||||||| ||||||||||| | |||||||| |||||||| |||||||    
T  141945 ggctaaactgcacttttcgtcccctatgttttataatgttgcaattttggcctcttatt 142003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 109 - 270
Target Start/End: Original strand, 29796 - 29959
Alignment:
Q  109 accccatgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgttt-gaacttttatttttacaaaaagttgcgattatggtctctt 207  Q
    ||||||||||| ||| ||||||||||||  |||||||||||| | |||||||| | ||| || |  |||| ||  ||||||||||| ||||||| ||||     
T  29796 accccatgtttggggaaatatgctctttggacccctaacataagggaaatatgatcttttgaccccttatcttctcaaaaagttgcaattatggcctctg 29895  T
Q  208 ttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaatcgtaacatttt 270  Q
     ||||  || ||||||||||||||| |||||||||||||||||||| |||||| | ||||||||    
T  29896 atttggaacctgtggcgtcttctcagcaattttgggacgaaaggggccaaaattgcaacatttt 29959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 25183 - 25036
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| ||||||||||||| ||||| ||||||| | |||||||| | ||||| |  |||| ||||  |||||||| |||||||| | ||||||||    
T  25183 atgtttagggaaatatgctcttttgaccccctaacataagggaaatatgctttttgaccccttatctttaacaaaagttgtgattatggccccttttttg 25084  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| |||||||||||||| ||||||||| | |||||||| ||||||    
T  25083 ggacacgtggcgtcttctcagcaattttggtatgaaaggggccaaaat 25036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 52; Significance: 9e-21; HSPs: 4)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 49744 - 49891
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||| ||| ||||||||||||| ||||| ||||||| | |||||||||| ||||| |  |||| ||||||||||||||||||||||  | ||||| ||    
T  49744 atgtttcgggaaatatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttctg 49843  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| ||||| |||||| | ||||||||||| |||||||| ||||||    
T  49844 ggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaat 49891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 62283 - 62430
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||| ||| ||||||||||||| ||||| ||||||| | |||||||||| ||||| |  |||| ||||||||||||||||||||||  | ||||| ||    
T  62283 atgtttcgggaaatatgctcttttgaccccctaacataagggaaatatgttttttgaccccttatctttacaaaaagttgcgattatgaccccttttctg 62382  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
     |||| ||||| |||||| | ||||||||||| |||||||| ||||||    
T  62383 ggacacgtggcatcttctgagcaattttgggatgaaaggggccaaaat 62430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 49954 - 49914
Alignment:
Q  40 tgcacttttcgcccc-tatgtttcaaaatgttgcgattttg 79  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  49954 tgcacttttcgccccctatgtttcataatgttgcgattttg 49914  T

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Target: scaffold0062; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 62493 - 62453
Alignment:
Q  40 tgcacttttcgcccc-tatgtttcaaaatgttgcgattttg 79  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  62493 tgcacttttcgccccctatgtttcataatgttgcgattttg 62453  T

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Target: scaffold0267 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 109 - 249
Target Start/End: Complemental strand, 3792 - 3650
Alignment:
Q  109 accccatgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctctt 207  Q
    ||||||||||||||| ||||||||||||| ||||| ||||||| | |||||||| | ||||| |  |||| ||||||||||||| ||||||| | | |||    
T  3792 accccatgtttagggaaatatgctcttttgaccccctaacataagggaaatatgctttttgaccccttatctttacaaaaagtttcgattatagcccctt 3693  T
Q  208 ttttgagacatgtggcgtcttctca-caattttgggacgaaag 249  Q
    ||||| |||| | || ||||||||| ||||||||||| |||||    
T  3692 ttttgggacacgaggtgtcttctcagcaattttgggatgaaag 3650  T

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Target: scaffold0291 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 113 - 251
Target Start/End: Original strand, 10005 - 10145
Alignment:
Q  113 catgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgttt-gaacttttatttttacaaaaagttgcgattatggtctctttttt 211  Q
    ||||||||||| ||||||||||||| |||| ||||||| |  ||||||| | ||| || |  |||| ||  |||||||||||||||||   | |||||||    
T  10005 catgtttagggaaatatgctcttttgacccataacataaggaaaatatgatctttagaccccttatcttctcaaaaagttgcgattatttcccctttttt 10104  T
Q  212 gagacatgtggcgtcttctc-acaattttgggacgaaaggg 251  Q
    | |||||||||||||||||| ||||||||||||||||||||    
T  10105 gtgacatgtggcgtcttctcaacaattttgggacgaaaggg 10145  T

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Target: scaffold0406 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 259
Target Start/End: Original strand, 2080 - 2223
Alignment:
Q  118 ttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttgagac 216  Q
    |||||| ||||||||||||| ||| ||||||||| | |||| ||| | ||||| |   ||| ||||||||||||||||||||| | | |||||||| |||    
T  2080 ttagggaaatatgctcttttgacctcctaacataagggaaacatgctttttgaccccatatctttacaaaaagttgcgattatagccccttttttgggac 2179  T
Q  217 atgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    | |||||||||||||| ||||||| ||| |||||||| ||||||    
T  2180 acgtggcgtcttctcagcaatttttggatgaaaggggccaaaat 2223  T

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Target: scaffold0150 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 5916 - 6063
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc--taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctctttttt 211  Q
    |||||||||| |||||||| |||| |||||  ||||||| | |||||||| | ||||| |  |||| |||| |||||||||||||||||  || ||||||    
T  5916 atgtttagggaaatatgctattttgacccccctaacataagggaaatatgctttttgaccccttatctttataaaaagttgcgattatgacct-tttttt 6014  T
Q  212 gagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
    | |||| ||||| |||||||| ||||||||||| ||| |||| ||||||    
T  6015 gggacacgtggcatcttctcagcaattttgggatgaagggggccaaaat 6063  T

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Target: scaffold0024 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 110 - 245
Target Start/End: Complemental strand, 44047 - 43910
Alignment:
Q  110 ccccatgtttagggcaatatgctcttttaacccctaacatatgagaaatatgttgttt-gaacttttatttttacaaaaagttgcgattatggtctcttt 208  Q
    |||||||||||||  |||||||| |||| |||||||||  | | |||||||| | ||| || ||||||| ||  ||||||||||||| ||||||| || |    
T  44047 ccccatgtttaggaaaatatgcttttttgacccctaacgaaagggaaatatgatcttttgaccttttatcttctcaaaaagttgcgactatggtccctgt 43948  T
Q  209 tttgagacatgtggcgtcttctca-caattttgggacg 245  Q
    |||| |||| |||||||||||||| |||||||| ||||    
T  43947 tttgggacacgtggcgtcttctcagcaattttgtgacg 43910  T

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Target: scaffold0002 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 110 - 252
Target Start/End: Original strand, 455107 - 455252
Alignment:
Q  110 ccccatgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgttt-gaacttttatttttacaaaaagttgcgattatggtctctt 207  Q
    |||||||||||||  |||||| |||||||||||| ||||||| | |||||||| | ||| || |  |||| ||  | ||||||||||||||||  |  ||    
T  455107 ccccatgtttaggaaaatatgttcttttaaccccctaacataagggaaatatgatcttttgaccccttatcttctctaaaagttgcgattatgacccatt 455206  T
Q  208 ttttgagacatgtggcgtcttctca-caattttgggacgaaagggg 252  Q
    ||||| ||||||||||||||||||| ||||||||||| ||||||||    
T  455207 ttttgggacatgtggcgtcttctcagcaattttgggatgaaagggg 455252  T

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Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 455011 - 455044
Alignment:
Q  110 ccccatgtttagggcaatatgctcttttaacccc 143  Q
    |||||||||||||| |||||||||||||||||||    
T  455011 ccccatgtttagggaaatatgctcttttaacccc 455044  T

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Target: scaffold0002; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 455327 - 455282
Alignment:
Q  37 aactgcacttttcgc-ccctatgtttcaaaatgttgcgattttggc 81  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||    
T  455327 aactgcacttttcgaaccctaagtttcaaaatgttgcgattttggc 455282  T

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Target: scaffold0060 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 259
Target Start/End: Original strand, 66259 - 66406
Alignment:
Q  114 atgtttagggcaatatgctcttttaacc-cctaacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttg 212  Q
    |||||||||| |||||||| |||| ||| ||||||||| | ||| |||| | ||||| |  |||| ||||||||||||||||||||||  | |||||||     
T  66259 atgtttagggaaatatgctattttgacctcctaacataagggaactatgctttttgaccccttatctttacaaaaagttgcgattatgaccccttttttt 66358  T
Q  213 agacatgtggcgtcttctca-caattttgggacgaaaggggacaaaat 259  Q
      ||| ||||||||||||||  |||||| ||| |||||||| ||||||    
T  66359 gaacacgtggcgtcttctcagaaatttttggatgaaaggggccaaaat 66406  T

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Target: scaffold0060; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 66477 - 66427
Alignment:
Q  32 ggctcaactgcacttttcgcccc-tatgtttcaaaatgttgcgattttggc 81  Q
    |||| |||||||||||||||||| |||||||||||||||||  ||||||||    
T  66477 ggctaaactgcacttttcgccccctatgtttcaaaatgttgtaattttggc 66427  T

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Target: scaffold1875 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1875
Description:

Target: scaffold1875; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 174 - 259
Target Start/End: Complemental strand, 914 - 828
Alignment:
Q  174 ttatttttacaaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctc-acaattttgggacgaaaggggacaaaat 259  Q
    |||| ||||||||||||||| ||||||  | ||| |||| ||||| |||||||||||| |||||||||||||||| |||| ||||||    
T  914 ttatctttacaaaaagttgcaattatgaccccttatttgggacatctggcgtcttctcaacaattttgggacgaagggggccaaaat 828  T

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Target: scaffold1202 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1202
Description:

Target: scaffold1202; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 200
Target Start/End: Complemental strand, 1993 - 1906
Alignment:
Q  114 atgtttagggcaatatgctcttttaacccc-taacatatgagaaatatgttgtttgaacttttatttttacaaaaagttgcgattatg 200  Q
    |||||||||| |||||||| |||| ||||| ||||||| | |||||||| | ||||| |  |||| ||||||||||||||||||||||    
T  1993 atgtttagggaaatatgctattttgaccccctaacataagggaaatatgctttttgaccccttatctttacaaaaagttgcgattatg 1906  T

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Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 248
Target Start/End: Original strand, 112282 - 112348
Alignment:
Q  183 caaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctc-acaattttgggacgaaa 248  Q
    |||||||||||| ||||||||  ||||||| ||||||||||||||||||  ||||||| ||||||||    
T  112282 caaaaagttgcggttatggtccattttttgggacatgtggcgtcttctctgcaattttaggacgaaa 112348  T

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Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 232
Target Start/End: Complemental strand, 250696 - 250618
Alignment:
Q  154 gaaatatgttgtttgaacttttatttttacaaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca 232  Q
    |||||||||| ||||| |  |||| |||||||||||||| |||||||| | |||||||| | || ||||||||||||||    
T  250696 gaaatatgttttttgaccccttatctttacaaaaagttgtgattatggccccttttttggggcacgtggcgtcttctca 250618  T

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Target: scaffold0171 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 264
Target Start/End: Original strand, 9178 - 9270
Alignment:
Q  174 ttatttttacaaaaagttgcgattatggtctc-ttttttgagacatgtggcgtcttctca-caattttgggacgaaaggggacaaaatcgtaa 264  Q
    |||| ||| ||||||||||||||||||  | | ||||||| |||| ||| |||||||| | |||||||||||||||||||| |||||| ||||    
T  9178 ttatcttttcaaaaagttgcgattatgacccccttttttgggacacgtgacgtcttctaagcaattttgggacgaaaggggccaaaattgtaa 9270  T

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Target: scaffold0064 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 54516 - 54573
Alignment:
Q  174 ttatttttacaaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctca 232  Q
    |||| ||||||||||||||||||||||| | | |||||| ||||||||||| |||||||    
T  54516 ttatctttacaaaaagttgcgattatgg-cccctttttgggacatgtggcggcttctca 54573  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 259
Target Start/End: Complemental strand, 35262 - 35176
Alignment:
Q  174 ttatttttacaaaaagttgcgattatggtctcttttttgagacatgtggcgtcttctc-acaattttgggacgaaaggggacaaaat 259  Q
    |||| |||| ||||| ||| ||||||| | ||||||||||||||  |||||| ||||| ||||||||| |||||||| || ||||||    
T  35262 ttatctttagaaaaacttgtgattatgatatcttttttgagacacatggcgttttctcaacaattttgagacgaaagaggccaaaat 35176  T

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