View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13878_low_22 (Length: 301)
Name: NF13878_low_22
Description: NF13878
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13878_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 1 - 297
Target Start/End: Complemental strand, 7090031 - 7089734
Alignment:
| Q |
1 |
ttgctttctcaatggcctatgatttcccaaccaattgtagtaaattaaaccaccaattttgtctaagaatcttataccttttctcttactatgtccttgt |
100 |
Q |
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| T |
7090031 |
ttgctttctcaatggcctatgatttcccaaccaattgtagtaaattaaaccaccaattttgtctaagaatcttataccttttctcttactatgtccttgt |
7089932 |
T |
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| Q |
101 |
caattaaaataattaatagcttttaaaattttgtcacactcattggaagtcttttagaaatatgattgaaccggtcggttcaactggttcaattaaaatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
7089931 |
caattaaaataattaatagcttttaaaattttgtcacactcattggaagtgttttagaaatatgattgaaccggtcggttcaactggttcaatcgaaatt |
7089832 |
T |
|
| Q |
201 |
tgtcgtctggtttaatctcagatgcattatagtctagttgaatcgagttgaactacaattgattcaagtgtattttaatattttc-ttacctttttat |
297 |
Q |
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| |||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
7089831 |
tttcgtttggtttaatctcaattacattatagtctagttgaatcgagttgaactacaattgattcaagtgtattttaatattttctttacctttttat |
7089734 |
T |
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