View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13878_low_30 (Length: 254)
Name: NF13878_low_30
Description: NF13878
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13878_low_30 |
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Alignment Details
Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 16 - 237
Target Start/End: Complemental strand, 43105716 - 43105495
Alignment:
| Q |
16 |
ataaaaatataatacccatccaatcaacactggtatattccatggaatccaaaggtcctatattaatttaaatatataaataaatcctaaatatcttgct |
115 |
Q |
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| T |
43105716 |
ataaaaatataatacccatccaatcaacactggtatattccatggaatccaaaggtcctatattaatttaaatatataaataaatcctaaatatcttgct |
43105617 |
T |
|
| Q |
116 |
tatgtgcaaaccttgcactctatttgcctataaataccctttgtttgtccttgatcatcttcacagagttatatagttatctcatcaaaattagcttttt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43105616 |
tatgtgcaaaccttgcactctatttgcctataaataccctttgtttgtccttgatcatcttcacagagttatatagttatctcatcaaaattagcttttt |
43105517 |
T |
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| Q |
216 |
gttcatttataatggctggagt |
237 |
Q |
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|||||||||||||||||||||| |
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| T |
43105516 |
gttcatttataatggctggagt |
43105495 |
T |
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