View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13879_high_5 (Length: 413)

Name: NF13879_high_5
Description: NF13879
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13879_high_5
NF13879_high_5
[»] chr7 (5 HSPs)
chr7 (21-254)||(6849724-6849957)
chr7 (21-254)||(6890160-6890393)
chr7 (24-254)||(6845153-6845382)
chr7 (21-253)||(30597060-30597289)
chr7 (336-403)||(6850083-6850150)
[»] chr8 (6 HSPs)
chr8 (93-243)||(25462176-25462326)
chr8 (21-85)||(27700897-27700961)
chr8 (249-304)||(25462063-25462117)
chr8 (26-68)||(26291937-26291979)
chr8 (26-68)||(26305194-26305236)
chr8 (26-68)||(26338549-26338591)
[»] chr4 (2 HSPs)
chr4 (21-83)||(52187811-52187873)
chr4 (123-164)||(52187913-52187954)
[»] chr1 (1 HSPs)
chr1 (19-68)||(28927460-28927509)
[»] chr2 (5 HSPs)
chr2 (123-179)||(38990188-38990244)
chr2 (28-104)||(43863103-43863179)
chr2 (19-70)||(43429256-43429307)
chr2 (25-68)||(43866612-43866655)
chr2 (123-168)||(43866512-43866557)
[»] chr5 (5 HSPs)
chr5 (27-85)||(25216905-25216963)
chr5 (27-85)||(25281060-25281118)
chr5 (25-72)||(33957589-33957636)
chr5 (123-165)||(28092164-28092206)
chr5 (123-156)||(33957508-33957541)
[»] chr3 (6 HSPs)
chr3 (25-81)||(7057858-7057914)
chr3 (123-154)||(1187645-1187676)
chr3 (123-156)||(477095-477128)
chr3 (21-85)||(7119819-7119883)
chr3 (25-81)||(8032346-8032402)
chr3 (21-85)||(13493017-13493081)
[»] scaffold0438 (1 HSPs)
scaffold0438 (26-68)||(6319-6361)


Alignment Details
Target: chr7 (Bit Score: 150; Significance: 4e-79; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 21 - 254
Target Start/End: Original strand, 6849724 - 6849957
Alignment:
Q  21 ttcctgatttatcgaaggttgagttccattccttgtgtaacttgaagttacttaaagtaaaaatgtgcataccttcatcgatacctaataggacttttta 120  Q
    |||||||||||| ||||||||| ||||||||||||||  ||||||||| ||||  |||||||| | | | |||||| || ||||||||| |||||||| |    
T  6849724 ttcctgatttattgaaggttgaattccattccttgtgggacttgaagtcacttggagtaaaaacgaggacaccttcttccatacctaatgggacttttga 6849823  T
Q  121 ccttttgcttcaaaactcaccctcggcaaaggttgaaatcatagatttgttaaggtaaatgtgcacttaacttgttgagcataatttctctggattggtt 220  Q
    | |||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  6849824 ctttttgcttcaaaactcaccctcagcaaaggtcaaaatcatagatttgttaaggtaaatgtgcatttaacttgttgagcataatttctctggtttggtt 6849923  T
Q  221 tttgcaatgcagttagtttagttgctgaaagttg 254  Q
    ||||||||||||||||||||||||||||||||||    
T  6849924 tttgcaatgcagttagtttagttgctgaaagttg 6849957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 21 - 254
Target Start/End: Original strand, 6890160 - 6890393
Alignment:
Q  21 ttcctgatttatcgaaggttgagttccattccttgtgtaacttgaagttacttaaagtaaaaatgtgcataccttcatcgatacctaataggacttttta 120  Q
    |||||||||||| |||||||||||| ||||||||||||| |||||||| ||||| |||||||| | | | ||||||||  ||||||||| |||||||| |    
T  6890160 ttcctgatttattgaaggttgagtttcattccttgtgtagcttgaagtcacttagagtaaaaacgaggacaccttcatgcatacctaatgggacttttga 6890259  T
Q  121 ccttttgcttcaaaactcaccctcggcaaaggttgaaatcatagatttgttaaggtaaatgtgcacttaacttgttgagcataatttctctggattggtt 220  Q
    | ||||||||||||||||||||||  ||||||||||||||||||||   || ||||||||||||| ||||||||||||||| | ||| ||||| ||||||    
T  6890260 ctttttgcttcaaaactcaccctcaacaaaggttgaaatcatagatcctttcaggtaaatgtgcatttaacttgttgagcacagtttttctggtttggtt 6890359  T
Q  221 tttgcaatgcagttagtttagttgctgaaagttg 254  Q
    ||||||||||||||||||||||||||||||||||    
T  6890360 tttgcaatgcagttagtttagttgctgaaagttg 6890393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 24 - 254
Target Start/End: Original strand, 6845153 - 6845382
Alignment:
Q  24 ctgatttatcgaaggttgagttccattccttgtgtaacttgaagttacttaaagtaaaaatgtgcataccttcatcgatacctaataggactttttacct 123  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||| ||||| |||||||||| | | ||||||||| ||| ||||| | ||||| ||| |    
T  6845153 ctgatttattgaaggttgagttccattccttgtgtaatttgaagtcacttagagtaaaaatgaggacaccttcatccatatctaatggaactttgtactt 6845252  T
Q  124 tttgcttcaaaactcaccctcggcaaaggttgaaatcatagatttgttaaggtaaatgtgcacttaacttgttgagcataatttctctggattggttttt 223  Q
    ||||||||||||||||||||| ||||||||||||||||||||||  | ||||||||| |||| ||||||| ||||||| ||||| ||||| |||||||||    
T  6845253 tttgcttcaaaactcaccctcagcaaaggttgaaatcatagattgttgaaggtaaat-tgcatttaacttattgagcacaatttttctggtttggttttt 6845351  T
Q  224 gcaatgcagttagtttagttgctgaaagttg 254  Q
    |||||||||| |||||||||  |||||||||    
T  6845352 gcaatgcagtgagtttagttattgaaagttg 6845382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 21 - 253
Target Start/End: Complemental strand, 30597289 - 30597060
Alignment:
Q  21 ttcctgatttatcgaaggttgagttccattccttgtgtaacttgaagttacttaaagtaaaaatgtgcataccttcatcgatacctaataggacttttta 120  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||| || |||||| | || || ||    
T  30597289 ttcctgatttattgaaggttgagttccattccttgtgtaacttgaagttacttaaagtgaaaatgcgcataccctcatccatgcctaatggaacgttgta 30597190  T
Q  121 ccttttgcttcaaaactcaccctcggcaaaggttgaaatcatagatttgttaaggtaaatgtgcacttaacttgttgagcataatttctctggattggtt 220  Q
    | |||| ||||||||||||||||| ||||||||||||||| |||||| |   ||||||||||||    ||| |||||| || || || ||||| ||  ||    
T  30597189 ctttttacttcaaaactcaccctcagcaaaggttgaaatcgtagattgg---aggtaaatgtgcttacaacctgttgaacaaaaattttctggtttaatt 30597093  T
Q  221 tttgcaatgcagttagtttagttgctgaaagtt 253  Q
    |||||||||||||||||||||||||||||||||    
T  30597092 tttgcaatgcagttagtttagttgctgaaagtt 30597060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 336 - 403
Target Start/End: Original strand, 6850083 - 6850150
Alignment:
Q  336 tatatccctgtaatgcagtttaatggttctttttgtgcatgttatagtactaagcttatttgatgatg 403  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  6850083 tatatccctgtaatgcagttcaatggttctttttgtgcatgttatagtactaagcttatttgatgatg 6850150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 7e-25; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 93 - 243
Target Start/End: Complemental strand, 25462326 - 25462176
Alignment:
Q  93 cttcatcgatacctaataggactttttaccttttgcttcaaaactcaccctcggcaaaggttgaaatcatagatttgttaaggtaaatgtgcacttaact 192  Q
    ||||||| ||||| ||| | ||||| | | |||||||||||||||| || || |||||||||||||||||| ||| || ||||||||| |  | | ||||    
T  25462326 cttcatccataccaaatggaactttgttctttttgcttcaaaactcgccttcagcaaaggttgaaatcataaattggtgaaggtaaatctcaattcaact 25462227  T
Q  193 tgttgagcataatttctctggattggtttttgcaatgcagttagtttagtt 243  Q
    ||||||||| ||||| | |||  ||||||||||||||||||||||||||||    
T  25462226 tgttgagcacaatttttgtggtctggtttttgcaatgcagttagtttagtt 25462176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 85
Target Start/End: Complemental strand, 27700961 - 27700897
Alignment:
Q  21 ttcctgatttatcgaaggttgagttccattccttgtgtaacttgaagttacttaaagtaaaaatg 85  Q
    |||||||||||| ||||||||||||   |||||| |||||||||||||  || ||||||||||||    
T  27700961 ttcctgatttattgaaggttgagttttcttccttatgtaacttgaagtcgctgaaagtaaaaatg 27700897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 249 - 304
Target Start/End: Complemental strand, 25462117 - 25462063
Alignment:
Q  249 aagttgaatgtgaaaagaattcaaagatgtgaaggaatttatatggttttgcttta 304  Q
    |||||||||||||||| ||| |||||||||||||||| |||||| ||||| |||||    
T  25462117 aagttgaatgtgaaaaaaatgcaaagatgtgaaggaa-ttatattgtttttcttta 25462063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 26291937 - 26291979
Alignment:
Q  26 gatttatcgaaggttgagttccattccttgtgtaacttgaagt 68  Q
    ||||||| ||||||||| |||| ||||||||||||||||||||    
T  26291937 gatttattgaaggttgacttcccttccttgtgtaacttgaagt 26291979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 26305194 - 26305236
Alignment:
Q  26 gatttatcgaaggttgagttccattccttgtgtaacttgaagt 68  Q
    ||||||| ||||||||| |||| ||||||||||||||||||||    
T  26305194 gatttattgaaggttgacttcccttccttgtgtaacttgaagt 26305236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 26338549 - 26338591
Alignment:
Q  26 gatttatcgaaggttgagttccattccttgtgtaacttgaagt 68  Q
    ||||||| ||||||||| |||| ||||||||||||||||||||    
T  26338549 gatttattgaaggttgacttcccttccttgtgtaacttgaagt 26338591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 52187811 - 52187873
Alignment:
Q  21 ttcctgatttatcgaaggttgagttccattccttgtgtaacttgaagttacttaaagtaaaaa 83  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||| ||| ||| ||||||    
T  52187811 ttcctgatttattgaaggttgagttccattccttgtgtaccttgaagtcactgaaaataaaaa 52187873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 164
Target Start/End: Original strand, 52187913 - 52187954
Alignment:
Q  123 ttttgcttcaaaactcaccctcggcaaaggttgaaatcatag 164  Q
    ||||| |||||||||||||||||||||| ||||| |||||||    
T  52187913 ttttgattcaaaactcaccctcggcaaaagttgacatcatag 52187954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 28927509 - 28927460
Alignment:
Q  19 aattcctgatttatcgaaggttgagttccattccttgtgtaacttgaagt 68  Q
    ||||||||||||||  |||||||||||||||||||||||||| |||||||    
T  28927509 aattcctgatttattcaaggttgagttccattccttgtgtaaattgaagt 28927460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 38990188 - 38990244
Alignment:
Q  123 ttttgcttcaaaactcaccctcggcaaaggttgaaatcatagatttgttaaggtaaa 179  Q
    ||||| |||||||||||||||||||||||||||| ||||||  ||||| ||||||||    
T  38990188 ttttgattcaaaactcaccctcggcaaaggttgacatcatacgtttgtaaaggtaaa 38990244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 43863179 - 43863103
Alignment:
Q  28 tttatcgaaggttgagttccattccttgtgtaacttgaagttacttaaagtaaaaatgtgcataccttcatcgatac 104  Q
    ||||| |||||| ||| ||| |||||||||||||||||||| ||| ||| | ||| ||  |||||||||||||||||    
T  43863179 tttattgaaggtagagctcccttccttgtgtaacttgaagtcactgaaaattaaagtggtcataccttcatcgatac 43863103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 43429307 - 43429256
Alignment:
Q  19 aattcctgatttatcgaaggttgagttccattccttgtgtaacttgaagtta 70  Q
    |||||||||||||||| ||||| |||||  ||| ||||||||||||||||||    
T  43429307 aattcctgatttatcggaggttaagttctcttctttgtgtaacttgaagtta 43429256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 43866655 - 43866612
Alignment:
Q  25 tgatttatcgaaggttgagttccattccttgtgtaacttgaagt 68  Q
    |||||||| |||||||||||||| |||||||| |||||||||||    
T  43866655 tgatttattgaaggttgagttcccttccttgtttaacttgaagt 43866612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 168
Target Start/End: Complemental strand, 43866557 - 43866512
Alignment:
Q  123 ttttgcttcaaaactcaccctcggcaaaggttgaaatcatagattt 168  Q
    ||||| ||||||||||||||||| |||||||||| |||||| ||||    
T  43866557 ttttgattcaaaactcaccctcgacaaaggttgacatcatacattt 43866512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 25216905 - 25216963
Alignment:
Q  27 atttatcgaaggttgagttccattccttgtgtaacttgaagttacttaaagtaaaaatg 85  Q
    |||||| |||||||||||||| | |||||| ||||||||||| |||||||||| |||||    
T  25216905 atttattgaaggttgagttccctaccttgtataacttgaagtcacttaaagtagaaatg 25216963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 25281060 - 25281118
Alignment:
Q  27 atttatcgaaggttgagttccattccttgtgtaacttgaagttacttaaagtaaaaatg 85  Q
    |||||| |||||||||||||| | |||||| ||||||||||| |||||||||| |||||    
T  25281060 atttattgaaggttgagttccctaccttgtataacttgaagtcacttaaagtagaaatg 25281118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 33957636 - 33957589
Alignment:
Q  25 tgatttatcgaaggttgagttccattccttgtgtaacttgaagttact 72  Q
    |||||||| |||| ||||||||| ||||| ||||||||||||||||||    
T  33957636 tgatttattgaagcttgagttcccttcctagtgtaacttgaagttact 33957589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 165
Target Start/End: Original strand, 28092164 - 28092206
Alignment:
Q  123 ttttgcttcaaaactcaccctcggcaaaggttgaaatcataga 165  Q
    ||||| |||||||||||||||||||||||||||| || |||||    
T  28092164 ttttgattcaaaactcaccctcggcaaaggttgacattataga 28092206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 156
Target Start/End: Complemental strand, 33957541 - 33957508
Alignment:
Q  123 ttttgcttcaaaactcaccctcggcaaaggttga 156  Q
    ||||||||||||||||||| ||||||||||||||    
T  33957541 ttttgcttcaaaactcaccttcggcaaaggttga 33957508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000002; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 7057914 - 7057858
Alignment:
Q  25 tgatttatcgaaggttgagttccattccttgtgtaacttgaagttacttaaagtaaa 81  Q
    |||||||||||||||||||||| |||  |||  ||||||||||| ||||||||||||    
T  7057914 tgatttatcgaaggttgagttcaattttttgcataacttgaagtcacttaaagtaaa 7057858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 123 - 154
Target Start/End: Original strand, 1187645 - 1187676
Alignment:
Q  123 ttttgcttcaaaactcaccctcggcaaaggtt 154  Q
    ||||||||||||||||||||||||||||||||    
T  1187645 ttttgcttcaaaactcaccctcggcaaaggtt 1187676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 156
Target Start/End: Original strand, 477095 - 477128
Alignment:
Q  123 ttttgcttcaaaactcaccctcggcaaaggttga 156  Q
    |||||||||||||||||||||| |||||||||||    
T  477095 ttttgcttcaaaactcaccctcagcaaaggttga 477128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 7119819 - 7119883
Alignment:
Q  21 ttcctgatttatcgaaggttgagttccattccttgtgtaacttgaagttacttaaagtaaaaatg 85  Q
    |||||||||||| ||||||| || | | |||||||||||||||||||| | | | ||||||||||    
T  7119819 ttcctgatttattgaaggttaagctaccttccttgtgtaacttgaagtcattaagagtaaaaatg 7119883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 8032402 - 8032346
Alignment:
Q  25 tgatttatcgaaggttgagttccattccttgtgtaacttgaagttacttaaagtaaa 81  Q
    |||||||| || ||||||||||| ||||||| |||||||||||| ||| ||| ||||    
T  8032402 tgatttattgacggttgagttcccttccttgcgtaacttgaagtcactgaaattaaa 8032346  T

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Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 13493017 - 13493081
Alignment:
Q  21 ttcctgatttatcgaaggttgagttccattccttgtgtaacttgaagttacttaaagtaaaaatg 85  Q
    |||||||| |||  |||||||| |||| || |||  |||||||||||||||| ||||||||||||    
T  13493017 ttcctgatctattaaaggttgacttcccttacttacgtaacttgaagttactgaaagtaaaaatg 13493081  T

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Target: scaffold0438 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 68
Target Start/End: Original strand, 6319 - 6361
Alignment:
Q  26 gatttatcgaaggttgagttccattccttgtgtaacttgaagt 68  Q
    ||||||| ||||||||| |||| ||||||||||||||||||||    
T  6319 gatttattgaaggttgacttcccttccttgtgtaacttgaagt 6361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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