View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13879_low_7 (Length: 276)
Name: NF13879_low_7
Description: NF13879
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13879_low_7 |
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Alignment Details
Target: chr1 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 18 - 232
Target Start/End: Original strand, 45056905 - 45057119
Alignment:
| Q |
18 |
aaaggagaatggcgagtacaagagcaacgataatagcgtttggaggacgaggcggtggtggaggaagtgaaggaaaggacaaacgagacattttctcacg |
117 |
Q |
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| T |
45056905 |
aaaggagaatggcgagtacaagagcaacgataatagcgtttgggggacgaggcggtggtggaggaagtgaaggaaaagacaaacgagacattctctcacg |
45057004 |
T |
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| Q |
118 |
tgtgaggttttctcgagaaaatatttttgagagagaaaattaggagaaagagggaaaaacttgcgtaagaagtaaaacaaaaccaagaaccaaaaggaag |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45057005 |
tgtgaggttttctcgagaaaatatttttgagagagaaaattaggagaaagagggaaaaacttgcgtaagaagtaaaacaaaaccaagaaccaaaaggaag |
45057104 |
T |
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| Q |
218 |
taagagactactgag |
232 |
Q |
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||||||||||||||| |
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| T |
45057105 |
taagagactactgag |
45057119 |
T |
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