View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13881_low_2 (Length: 618)

Name: NF13881_low_2
Description: NF13881
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13881_low_2
NF13881_low_2
[»] chr6 (40 HSPs)
chr6 (18-200)||(34488876-34489059)
chr6 (381-618)||(34489142-34489376)
chr6 (387-564)||(23947318-23947494)
chr6 (387-567)||(17237282-17237461)
chr6 (387-564)||(25064135-25064313)
chr6 (385-556)||(8196415-8196586)
chr6 (385-564)||(16419056-16419235)
chr6 (387-564)||(12652840-12653021)
chr6 (387-564)||(28635121-28635299)
chr6 (399-564)||(33543622-33543784)
chr6 (385-564)||(33740578-33740757)
chr6 (390-565)||(4468462-4468636)
chr6 (418-564)||(25337501-25337647)
chr6 (388-561)||(8028121-8028294)
chr6 (385-561)||(7876047-7876224)
chr6 (387-564)||(8496865-8497044)
chr6 (387-564)||(12165741-12165916)
chr6 (381-564)||(7881102-7881286)
chr6 (403-564)||(35001506-35001667)
chr6 (387-564)||(10228579-10228756)
chr6 (387-556)||(4088359-4088529)
chr6 (459-564)||(4351996-4352101)
chr6 (387-564)||(4984567-4984754)
chr6 (387-557)||(17334675-17334848)
chr6 (397-478)||(33109744-33109824)
chr6 (491-564)||(26588504-26588577)
chr6 (438-552)||(1704162-1704276)
chr6 (484-561)||(33110608-33110685)
chr6 (465-564)||(31575539-31575638)
chr6 (462-564)||(30493488-30493590)
chr6 (491-564)||(31296805-31296878)
chr6 (381-460)||(5582757-5582835)
chr6 (491-564)||(22571459-22571532)
chr6 (452-527)||(7027799-7027874)
chr6 (397-440)||(8266545-8266588)
chr6 (494-528)||(546014-546048)
chr6 (405-471)||(13436705-13436770)
chr6 (491-528)||(1523389-1523426)
chr6 (491-564)||(34185725-34185798)
chr6 (457-561)||(7976212-7976316)
[»] chr8 (54 HSPs)
chr8 (387-567)||(33342344-33342524)
chr8 (381-564)||(16794194-16794376)
chr8 (385-564)||(35580363-35580541)
chr8 (385-564)||(44099934-44100111)
chr8 (387-567)||(11196799-11196976)
chr8 (387-567)||(11725589-11725768)
chr8 (387-564)||(28239740-28239917)
chr8 (397-567)||(19876129-19876298)
chr8 (406-564)||(43192346-43192503)
chr8 (388-564)||(2655777-2655954)
chr8 (387-561)||(15597170-15597344)
chr8 (381-564)||(27747113-27747295)
chr8 (387-564)||(4808871-4809048)
chr8 (387-564)||(9619357-9619535)
chr8 (387-564)||(42448027-42448205)
chr8 (387-564)||(43890124-43890302)
chr8 (385-556)||(33895986-33896158)
chr8 (381-564)||(9072618-9072802)
chr8 (387-564)||(34611711-34611888)
chr8 (387-561)||(9498602-9498779)
chr8 (387-561)||(14906926-14907101)
chr8 (387-564)||(15046800-15046978)
chr8 (385-564)||(44577941-44578120)
chr8 (387-564)||(11464079-11464255)
chr8 (415-560)||(33298791-33298935)
chr8 (418-564)||(39153142-39153291)
chr8 (387-564)||(29777136-29777303)
chr8 (387-564)||(32724481-32724665)
chr8 (387-564)||(37565879-37566057)
chr8 (386-564)||(36532804-36532981)
chr8 (501-564)||(23851494-23851557)
chr8 (387-498)||(17949154-17949265)
chr8 (486-564)||(29617304-29617382)
chr8 (467-564)||(5333391-5333488)
chr8 (455-528)||(20227346-20227419)
chr8 (459-564)||(24099285-24099390)
chr8 (498-564)||(15889574-15889640)
chr8 (491-564)||(3240366-3240439)
chr8 (481-557)||(8443548-8443624)
chr8 (491-551)||(24853451-24853511)
chr8 (387-564)||(17427216-17427395)
chr8 (387-564)||(17430866-17431045)
chr8 (397-564)||(18733938-18734103)
chr8 (491-528)||(18890769-18890806)
chr8 (437-549)||(36568629-36568742)
chr8 (493-564)||(8826200-8826270)
chr8 (491-564)||(1236727-1236799)
chr8 (491-564)||(1239427-1239499)
chr8 (481-564)||(3673420-3673500)
chr8 (491-564)||(15344295-15344367)
chr8 (491-564)||(15433360-15433432)
chr8 (491-564)||(15524664-15524736)
chr8 (399-525)||(25241640-25241767)
chr8 (517-565)||(34412050-34412097)
[»] chr5 (52 HSPs)
chr5 (381-567)||(15570806-15570991)
chr5 (385-564)||(2057838-2058017)
chr5 (385-564)||(36344491-36344668)
chr5 (387-564)||(27266859-27267037)
chr5 (406-569)||(30298130-30298292)
chr5 (387-567)||(781292-781471)
chr5 (387-564)||(18677465-18677643)
chr5 (387-567)||(21060279-21060458)
chr5 (387-567)||(35475334-35475513)
chr5 (397-561)||(42886392-42886554)
chr5 (411-569)||(27751853-27752010)
chr5 (387-564)||(43261819-43261994)
chr5 (387-564)||(30371627-30371805)
chr5 (387-556)||(7150343-7150512)
chr5 (387-564)||(16981193-16981369)
chr5 (400-564)||(7613058-7613220)
chr5 (387-564)||(26578152-26578331)
chr5 (387-564)||(28235488-28235664)
chr5 (397-564)||(27576350-27576516)
chr5 (387-564)||(34881613-34881797)
chr5 (391-563)||(7246865-7247037)
chr5 (387-564)||(19280945-19281121)
chr5 (397-551)||(11767720-11767876)
chr5 (403-564)||(19259812-19259974)
chr5 (391-563)||(7241689-7241861)
chr5 (403-565)||(20257694-20257855)
chr5 (387-561)||(7886941-7887114)
chr5 (387-564)||(3271402-3271584)
chr5 (454-564)||(41184440-41184550)
chr5 (399-564)||(43148645-43148810)
chr5 (454-561)||(42579857-42579964)
chr5 (382-472)||(6445834-6445923)
chr5 (387-460)||(10649356-10649428)
chr5 (495-561)||(35921031-35921097)
chr5 (457-556)||(10649619-10649715)
chr5 (386-567)||(42432802-42432981)
chr5 (388-528)||(14211105-14211243)
chr5 (387-552)||(35631703-35631868)
chr5 (491-564)||(10332580-10332653)
chr5 (457-558)||(19983361-19983462)
chr5 (491-567)||(19120896-19120972)
chr5 (397-527)||(1582160-1582288)
chr5 (397-527)||(1602527-1602655)
chr5 (498-564)||(4954005-4954071)
chr5 (523-564)||(22978923-22978964)
chr5 (486-551)||(31802484-31802549)
chr5 (387-501)||(42432143-42432254)
chr5 (477-564)||(19349666-19349753)
chr5 (462-528)||(28540978-28541044)
chr5 (495-564)||(38711683-38711750)
chr5 (498-563)||(8984984-8985049)
chr5 (491-564)||(19100637-19100710)
[»] chr1 (59 HSPs)
chr1 (387-564)||(39987294-39987470)
chr1 (385-564)||(51871766-51871944)
chr1 (387-567)||(14545424-14545602)
chr1 (387-564)||(5701161-5701340)
chr1 (387-564)||(28035043-28035220)
chr1 (387-564)||(7997691-7997870)
chr1 (387-564)||(18569310-18569487)
chr1 (387-564)||(51868645-51868822)
chr1 (387-565)||(27872643-27872820)
chr1 (389-564)||(9919295-9919470)
chr1 (404-564)||(34519054-34519213)
chr1 (387-564)||(38520531-38520710)
chr1 (388-564)||(5324558-5324733)
chr1 (437-564)||(39927554-39927682)
chr1 (385-564)||(44637323-44637502)
chr1 (396-564)||(11453847-11454016)
chr1 (385-561)||(40881015-40881192)
chr1 (387-564)||(25406284-25406461)
chr1 (387-564)||(50272140-50272317)
chr1 (393-561)||(3871319-3871485)
chr1 (387-564)||(33291418-33291596)
chr1 (387-564)||(9172392-9172571)
chr1 (387-564)||(9180374-9180553)
chr1 (385-564)||(20266204-20266383)
chr1 (387-564)||(35584618-35584798)
chr1 (446-565)||(48365764-48365883)
chr1 (387-564)||(7342626-7342803)
chr1 (394-564)||(19715895-19716067)
chr1 (396-564)||(7312105-7312266)
chr1 (396-564)||(30878988-30879156)
chr1 (399-560)||(45426070-45426227)
chr1 (387-556)||(30818359-30818522)
chr1 (425-564)||(31836748-31836888)
chr1 (381-532)||(19723231-19723382)
chr1 (393-564)||(50166099-50166270)
chr1 (418-564)||(41081704-41081849)
chr1 (459-564)||(9687204-9687309)
chr1 (387-564)||(50148276-50148451)
chr1 (387-460)||(25728064-25728136)
chr1 (462-564)||(47132861-47132963)
chr1 (481-564)||(33817181-33817263)
chr1 (481-564)||(33876651-33876733)
chr1 (491-564)||(12635157-12635230)
chr1 (385-478)||(40646590-40646684)
chr1 (386-484)||(30558736-30558832)
chr1 (427-564)||(4396914-4397051)
chr1 (480-564)||(16262837-16262921)
chr1 (491-551)||(29837637-29837697)
chr1 (515-564)||(40646702-40646751)
chr1 (491-528)||(48750168-48750205)
chr1 (491-564)||(49626901-49626973)
chr1 (456-528)||(32679163-32679235)
chr1 (498-564)||(1602084-1602150)
chr1 (464-561)||(9341687-9341784)
chr1 (491-528)||(16161821-16161858)
chr1 (491-528)||(34413162-34413199)
chr1 (491-564)||(44543260-44543332)
chr1 (438-518)||(7836871-7836951)
chr1 (456-528)||(39724934-39725006)
[»] chr4 (71 HSPs)
chr4 (387-561)||(35964978-35965152)
chr4 (387-565)||(21090065-21090242)
chr4 (387-564)||(10389754-10389930)
chr4 (387-564)||(51317898-51318074)
chr4 (388-564)||(18138913-18139089)
chr4 (388-564)||(49126126-49126302)
chr4 (393-564)||(4643776-4643947)
chr4 (387-564)||(10359547-10359723)
chr4 (387-564)||(12265367-12265543)
chr4 (387-564)||(34024438-34024613)
chr4 (393-561)||(35261109-35261277)
chr4 (387-564)||(53616650-53616828)
chr4 (387-564)||(25273787-25273972)
chr4 (418-564)||(2624441-2624585)
chr4 (387-564)||(9528877-9529055)
chr4 (385-564)||(38706710-38706889)
chr4 (397-556)||(8009369-8009526)
chr4 (389-563)||(9645550-9645724)
chr4 (387-564)||(868069-868251)
chr4 (387-564)||(9283823-9284000)
chr4 (387-561)||(31381675-31381848)
chr4 (387-564)||(43444305-43444482)
chr4 (395-564)||(56194519-56194690)
chr4 (387-567)||(37188591-37188769)
chr4 (406-564)||(29965565-29965724)
chr4 (381-564)||(43154014-43154203)
chr4 (407-564)||(46991130-46991287)
chr4 (437-564)||(3336156-3336284)
chr4 (387-564)||(20569164-20569344)
chr4 (387-564)||(50766512-50766686)
chr4 (387-564)||(6972721-6972899)
chr4 (387-564)||(1531818-1531997)
chr4 (394-564)||(27593827-27594008)
chr4 (397-564)||(32952750-32952913)
chr4 (437-557)||(1931723-1931843)
chr4 (399-564)||(52097916-52098084)
chr4 (401-564)||(14183729-14183891)
chr4 (397-564)||(2115588-2115755)
chr4 (419-564)||(44947353-44947501)
chr4 (470-564)||(47417657-47417751)
chr4 (484-564)||(49410232-49410312)
chr4 (456-564)||(51888243-51888351)
chr4 (381-460)||(47416790-47416868)
chr4 (455-564)||(36204416-36204526)
chr4 (467-564)||(18048863-18048960)
chr4 (491-564)||(43853446-43853519)
chr4 (394-564)||(49680456-49680627)
chr4 (387-475)||(35351250-35351337)
chr4 (387-442)||(5333581-5333636)
chr4 (465-564)||(28857380-28857479)
chr4 (394-440)||(5333655-5333701)
chr4 (462-564)||(6155258-6155359)
chr4 (491-561)||(9643392-9643462)
chr4 (491-561)||(21405530-21405600)
chr4 (426-555)||(21554817-21554946)
chr4 (480-546)||(31359797-31359863)
chr4 (462-564)||(52944286-52944388)
chr4 (381-470)||(1008201-1008289)
chr4 (496-564)||(2069612-2069680)
chr4 (491-562)||(9713916-9713987)
chr4 (491-546)||(22300853-22300908)
chr4 (462-555)||(52204372-52204465)
chr4 (437-564)||(41255380-41255508)
chr4 (462-564)||(7393245-7393348)
chr4 (462-564)||(52933975-52934078)
chr4 (418-528)||(36194638-36194746)
chr4 (491-561)||(55227982-55228052)
chr4 (491-564)||(22038834-22038907)
chr4 (495-560)||(36161719-36161784)
chr4 (405-460)||(23100617-23100673)
chr4 (491-527)||(47320460-47320496)
[»] chr3 (57 HSPs)
chr3 (387-567)||(37169128-37169308)
chr3 (387-564)||(22802919-22803096)
chr3 (387-564)||(46934540-46934716)
chr3 (387-567)||(29503360-29503539)
chr3 (387-564)||(46178474-46178643)
chr3 (387-564)||(25162334-25162510)
chr3 (387-564)||(36906019-36906196)
chr3 (387-564)||(39917398-39917573)
chr3 (392-564)||(32607370-32607543)
chr3 (385-564)||(25631526-25631706)
chr3 (393-564)||(35499198-35499372)
chr3 (387-564)||(49552224-49552400)
chr3 (385-564)||(50611418-50611596)
chr3 (385-564)||(4178460-4178639)
chr3 (387-564)||(44907399-44907576)
chr3 (386-564)||(38855036-38855215)
chr3 (385-530)||(4172462-4172607)
chr3 (387-510)||(38440632-38440754)
chr3 (387-564)||(42719418-42719591)
chr3 (387-564)||(14464405-14464584)
chr3 (387-564)||(12115991-12116172)
chr3 (455-564)||(36734692-36734801)
chr3 (387-564)||(51202254-51202426)
chr3 (425-564)||(30648719-30648858)
chr3 (397-561)||(17237710-17237876)
chr3 (418-519)||(47980708-47980809)
chr3 (418-519)||(47989995-47990096)
chr3 (418-519)||(47999282-47999383)
chr3 (418-519)||(48008569-48008670)
chr3 (388-526)||(2342390-2342528)
chr3 (405-564)||(31793997-31794145)
chr3 (481-564)||(21488082-21488165)
chr3 (465-564)||(3848919-3849018)
chr3 (387-460)||(3850560-3850632)
chr3 (381-564)||(25849712-25849884)
chr3 (467-564)||(4396366-4396463)
chr3 (457-562)||(29239292-29239397)
chr3 (405-546)||(54378816-54378956)
chr3 (454-564)||(12947306-12947416)
chr3 (507-564)||(52496926-52496983)
chr3 (387-449)||(36735267-36735329)
chr3 (457-564)||(6910709-6910810)
chr3 (437-505)||(30829921-30829989)
chr3 (493-561)||(24396513-24396585)
chr3 (462-564)||(53508179-53508282)
chr3 (466-564)||(4821766-4821863)
chr3 (493-527)||(25461070-25461104)
chr3 (462-564)||(29922011-29922113)
chr3 (462-564)||(29971164-29971266)
chr3 (494-564)||(46322357-46322427)
chr3 (389-462)||(6913249-6913321)
chr3 (491-564)||(35175387-35175460)
chr3 (493-564)||(32246432-32246503)
chr3 (462-528)||(51487060-51487126)
chr3 (491-552)||(3606759-3606820)
chr3 (491-528)||(7546593-7546630)
chr3 (492-556)||(30293512-30293576)
[»] chr7 (60 HSPs)
chr7 (387-564)||(31235792-31235969)
chr7 (381-564)||(35667232-35667414)
chr7 (387-567)||(23425369-23425548)
chr7 (387-567)||(48207802-48207981)
chr7 (387-564)||(6001921-6002098)
chr7 (387-567)||(45199029-45199208)
chr7 (387-564)||(20116483-20116659)
chr7 (387-567)||(42067058-42067237)
chr7 (398-564)||(1448830-1448995)
chr7 (387-564)||(22927870-22928047)
chr7 (387-561)||(46821914-46822089)
chr7 (385-564)||(35496175-35496354)
chr7 (385-556)||(1485265-1485435)
chr7 (387-564)||(26492265-26492442)
chr7 (387-564)||(26583614-26583791)
chr7 (387-564)||(32521927-32522108)
chr7 (387-564)||(42311180-42311357)
chr7 (387-564)||(42408262-42408439)
chr7 (403-561)||(46818419-46818577)
chr7 (387-567)||(21266292-21266471)
chr7 (381-564)||(23085414-23085598)
chr7 (394-564)||(46338960-46339131)
chr7 (437-564)||(17611075-17611202)
chr7 (395-564)||(14627879-14628048)
chr7 (418-564)||(23786508-23786652)
chr7 (428-564)||(6558817-6558954)
chr7 (391-564)||(2843241-2843400)
chr7 (397-497)||(36143776-36143875)
chr7 (426-564)||(17223000-17223136)
chr7 (430-564)||(34773653-34773788)
chr7 (437-557)||(17499666-17499786)
chr7 (437-557)||(17553428-17553548)
chr7 (387-564)||(433691-433869)
chr7 (462-564)||(24069426-24069528)
chr7 (385-561)||(35261195-35261372)
chr7 (493-564)||(32684674-32684745)
chr7 (455-564)||(969479-969588)
chr7 (396-548)||(20083240-20083399)
chr7 (382-475)||(3860847-3860938)
chr7 (455-528)||(44311859-44311932)
chr7 (457-528)||(3394426-3394497)
chr7 (491-565)||(3224441-3224515)
chr7 (397-459)||(32684595-32684656)
chr7 (397-530)||(1100801-1100932)
chr7 (491-564)||(41553466-41553539)
chr7 (491-564)||(41553811-41553884)
chr7 (491-564)||(41554156-41554229)
chr7 (496-564)||(19560007-19560075)
chr7 (418-518)||(24770162-24770262)
chr7 (455-530)||(7640806-7640881)
chr7 (425-472)||(43369858-43369904)
chr7 (418-528)||(1749219-1749327)
chr7 (491-560)||(35665171-35665241)
chr7 (397-469)||(1097698-1097770)
chr7 (491-528)||(22742926-22742963)
chr7 (491-528)||(24350909-24350946)
chr7 (491-564)||(27997077-27997150)
chr7 (491-528)||(28476209-28476246)
chr7 (406-474)||(7740559-7740626)
chr7 (516-552)||(36143878-36143914)
[»] chr2 (62 HSPs)
chr2 (387-567)||(32913146-32913325)
chr2 (397-564)||(8805781-8805947)
chr2 (387-567)||(21570404-21570585)
chr2 (387-564)||(459274-459451)
chr2 (389-567)||(4192745-4192922)
chr2 (387-564)||(2808472-2808647)
chr2 (387-564)||(30420581-30420759)
chr2 (387-564)||(6173536-6173713)
chr2 (387-564)||(27249151-27249328)
chr2 (387-556)||(41430932-41431101)
chr2 (387-564)||(7015711-7015887)
chr2 (387-564)||(45128108-45128285)
chr2 (387-564)||(36233909-36234089)
chr2 (397-564)||(34598902-34599068)
chr2 (387-564)||(26025410-26025587)
chr2 (385-564)||(3725083-3725261)
chr2 (387-564)||(9986342-9986524)
chr2 (387-567)||(27477059-27477233)
chr2 (399-564)||(3270229-3270393)
chr2 (387-564)||(8971627-8971805)
chr2 (437-567)||(17319276-17319405)
chr2 (406-564)||(22421659-22421816)
chr2 (397-564)||(39641858-39642026)
chr2 (387-556)||(40659940-40660106)
chr2 (386-561)||(32197798-32197972)
chr2 (387-526)||(40626066-40626204)
chr2 (387-557)||(4228036-4228207)
chr2 (387-561)||(25086938-25087115)
chr2 (394-564)||(20047082-20047252)
chr2 (418-560)||(27949358-27949503)
chr2 (405-564)||(8308097-8308251)
chr2 (425-564)||(3269111-3269251)
chr2 (425-564)||(3269670-3269810)
chr2 (437-564)||(9374556-9374683)
chr2 (467-564)||(31580589-31580686)
chr2 (387-505)||(32680640-32680759)
chr2 (480-564)||(37614125-37614209)
chr2 (387-508)||(41712821-41712942)
chr2 (462-547)||(12647970-12648055)
chr2 (395-476)||(31581808-31581888)
chr2 (386-561)||(38293449-38293627)
chr2 (381-460)||(42949612-42949691)
chr2 (418-548)||(10248083-10248211)
chr2 (462-564)||(29574661-29574763)
chr2 (457-564)||(10929624-10929732)
chr2 (386-564)||(24587617-24587789)
chr2 (491-564)||(28533987-28534060)
chr2 (396-561)||(13719159-13719327)
chr2 (517-564)||(84180-84227)
chr2 (456-526)||(34128755-34128825)
chr2 (481-564)||(4904178-4904258)
chr2 (491-564)||(28227713-28227786)
chr2 (491-564)||(32448652-32448724)
chr2 (491-564)||(37416704-37416777)
chr2 (455-564)||(37994237-37994346)
chr2 (399-564)||(18113787-18113950)
chr2 (387-563)||(30923474-30923649)
chr2 (465-564)||(4264443-4264539)
chr2 (425-564)||(36323801-36323936)
chr2 (462-518)||(6436576-6436631)
chr2 (463-527)||(10792923-10792987)
chr2 (462-564)||(43397152-43397251)
[»] scaffold0014 (1 HSPs)
scaffold0014 (401-567)||(201369-201534)
[»] scaffold0495 (1 HSPs)
scaffold0495 (387-564)||(5298-5475)
[»] scaffold0003 (1 HSPs)
scaffold0003 (387-556)||(361807-361971)
[»] scaffold0002 (1 HSPs)
scaffold0002 (405-564)||(453851-454009)
[»] scaffold0311 (1 HSPs)
scaffold0311 (382-499)||(8615-8731)
[»] scaffold0146 (1 HSPs)
scaffold0146 (397-561)||(16323-16489)
[»] scaffold0264 (1 HSPs)
scaffold0264 (467-558)||(20402-20493)
[»] scaffold0347 (1 HSPs)
scaffold0347 (491-564)||(6014-6087)
[»] scaffold0426 (2 HSPs)
scaffold0426 (481-564)||(6299-6382)
scaffold0426 (385-439)||(6236-6290)
[»] scaffold0022 (1 HSPs)
scaffold0022 (455-564)||(83438-83544)
[»] scaffold0113 (1 HSPs)
scaffold0113 (397-564)||(36687-36852)
[»] scaffold0136 (1 HSPs)
scaffold0136 (501-564)||(34780-34843)
[»] scaffold0042 (1 HSPs)
scaffold0042 (465-564)||(92528-92627)
[»] scaffold0127 (1 HSPs)
scaffold0127 (465-546)||(15452-15531)


Alignment Details
Target: chr6 (Bit Score: 176; Significance: 2e-94; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 18 - 200
Target Start/End: Original strand, 34488876 - 34489059
Alignment:
Q  18 tgtagttatg-aagattgtataggaacacactgatctagggtcaacaaagccataacaaaatcaaggaaaattcacgggtttgaaaatgggatataagat 116  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34488876 tgtagttatggaagattgtataggaacacactgatctagggtcaacaaagccataacaaaatcaaggaaaattcacgggtttgaaaatgggatataagat 34488975  T
Q  117 tggcaaatggaggcaggcattgaatcaaatatgaaaccaacaaattgatgtatacatgattgttgaggctataatttggatctc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34488976 tggcaaatggaggcaggcattgaatcaaatatgaaaccaacaaattgatgtatacatgattgttgaggctataatttggatctc 34489059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 381 - 618
Target Start/End: Original strand, 34489142 - 34489376
Alignment:
Q  381 gacttaaaatcacccctcttcatctttttctctataattcaatat--aaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 478  Q
    ||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34489142 gacttaaaatcacccctcttcatctttttctctctaattcaatatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 34489241  T
Q  479 cgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagattggcttcaatg 578  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||     ||||||| |    
T  34489242 cgagtgtggtggtgtgttgttcgtcgtcttgtgcgacgttgtttgatttcccatattgttgtggtgttcatttgattcatattgaa-----gcttcaacg 34489336  T
Q  579 ttacagatccgagacatgggtattccggtaactttaattt 618  Q
    || ||||| ||||| |||||||||||||| ||||||||||    
T  34489337 ttgcagattcgagatatgggtattccggtcactttaattt 34489376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 23947494 - 23947318
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||||| |||||||| |||||||| || |||||| ||||||||||||||| |||||||||||||||||||||||  |||||||||||||  ||||||    
T  23947494 aaatcacccatcttcatcgttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttctttttgatttcatcatctaagtgtg 23947396  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| |||||||||||||||| |||| |||||||||||||||| | || ||||||||||||||||||||||||||||    
T  23947395 gtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccatctttttgcggtgttcatttgattcatattgaa 23947318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 387 - 567
Target Start/End: Complemental strand, 17237461 - 17237282
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||| ||||| ||||||||||||||||||||||| ||||||||| ||||  ||||||    
T  17237461 aaatcacccctcttcatctttttctctatatttcaatctaaataagttatttt-cacatagatctaggttttttctttgtgatttcagcatctaagtgtg 17237363  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagat 567  Q
    ||||| |||||||||||||||| |||| || |||| |||||||||| || ||||||||||||| |||||||| ||||||||    
T  17237362 gtggtttgttgttcgtcgtcttgtgcggcgctgttggatttcccgtcttcttgcggtgttcatctgattcattttgaagat 17237282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 25064135 - 25064313
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgagtg 484  Q
    |||||||| |||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||||||||||  ||| || |||||||||||  ||||    
T  25064135 aaatcacctctcttcatctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatctaagtg 25064233  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| | |||||||||||||||| |||| |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  25064234 tggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgttttcgtgcggtgttcatttgattcatattgaa 25064313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 385 - 556
Target Start/End: Complemental strand, 8196586 - 8196415
Alignment:
Q  385 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagt 483  Q
    ||||||||||| | ||||||||||||||| || |||||| ||||||||||||||| |||||||||||||||||||| ||| |||||||||||||   |||    
T  8196586 taaaatcacccgtattcatctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggtttttttctttgtgatttcatcatataagt 8196488  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattc 556  Q
    |||||||| |||||||||||||||| |||| |||||||||||||||||| ||  |||||||||||||||||||    
T  8196487 gtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattc 8196415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 385 - 564
Target Start/End: Original strand, 16419056 - 16419235
Alignment:
Q  385 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagt 483  Q
    ||||||||||| ||||||||||||||||| || |||||| ||||||||||| ||| |||||||||||  ||||||| ||| ||||||||||||||  |||    
T  16419056 taaaatcacccatcttcatctttttctctctatttcaatctaaataagtgacttt-cacatagatctttgtttttttctttgtgatttcatcatctaagt 16419154  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||| |||||||||||||||| |||| ||||||||| |||||||| || ||||||||||||||| ||||||||||||    
T  16419155 gtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcatattgaa 16419235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 12652840 - 12653021
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-----cttcgtgatttcatcatccga 481  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||| ||||||     ||| ||||||||||||||  |    
T  12652840 aaatcacccctcttcatctttttctctctatttcaatctaaataagtgatttt-cacatagatctagattttttttttcctttgtgatttcatcatctaa 12652938  T
Q  482 gtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||| |||||||| ||||||| |||| ||||||||||||| || | ||  |||||||||||||||||||||||||||    
T  12652939 gtgtggtggtttgttgttcatcgtcttgtgcggcgttgtttgattttccatcttcgtgcggtgttcatttgattcatattgaa 12653021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 28635299 - 28635121
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatt-tttcacatagatctaggttttttcttcgtgatttcatcatccgagtgt 485  Q
    |||||| |||||||||| ||||||| | || |||||| ||||||||||||| ||| ||||||||||| ||||||||| ||||||||| ||||  ||||||    
T  28635299 aaatcatccctcttcatatttttctttttatttcaatttaaataagtgattcttttacatagatctaagttttttctacgtgatttcgtcatttgagtgt 28635200  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    || ||| |||||||||||||||| | ||  ||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  28635199 ggcggtttgttgttcgtcgtcttgtacggtgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaa 28635121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 399 - 564
Target Start/End: Complemental strand, 33543784 - 33543622
Alignment:
Q  399 ttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgt 498  Q
    |||||||||||||||||| |||||| ||||||||| ||||||||||||||| || |||||| |||||||||||| ||||| || | ||||||||||||||    
T  33543784 ttcatctttttctctatatttcaatctaaataagtaatttttcacatagatttaagttttt-cttcgtgatttcgtcatctgattatggtggtgtgttgt 33543686  T
Q  499 tcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||| |||| ||||||||||||| | || |||||||||||||||||  ||||||||||||    
T  33543685 tcgtcgtcttgtgcggcgttgtttgattttctgtcttgttgcggtgttcatt--attcatattgaa 33543622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 385 - 564
Target Start/End: Complemental strand, 33740757 - 33740578
Alignment:
Q  385 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagt 483  Q
    ||||||||||||||||||||||||||||| || |||||| ||||||||||||||| ||||||||| |||||||||| ||| ||||||||||||||  |||    
T  33740757 taaaatcacccctcttcatctttttctctctatttcaatctaaataagtgatttt-cacatagatttaggtttttttctttgtgatttcatcatctaagt 33740659  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||| ||| ||||||||||||| || |||| |||||||| |||| ||||  |  |||||||||||||||||| ||||||||    
T  33740658 gtggcggtttgttgttcgtcgttttgtgcggcgttgtttcatttaccgtcctcgtgcggtgttcatttgatttatattgaa 33740578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 390 - 565
Target Start/End: Original strand, 4468462 - 4468636
Alignment:
Q  390 tcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtg 489  Q
    ||||||||||||||||| |||||| || |||||| ||||||||||||||| || |||||||||||||||||||| |||||||||||||   |||||||||    
T  4468462 tcacccctcttcatcttgttctctctatttcaatctaaataagtgatttt-catatagatctaggttttttctttgtgatttcatcatataagtgtggtg 4468560  T
Q  490 gtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaag 565  Q
    || |||| ||||||||||| |||  ||||||||||||| |||| ||  ||| |||||||||||||| |||||||||    
T  4468561 gtttgttattcgtcgtcttgtgcagcgttgtttgattttccgtcttcatgcagtgttcatttgatttatattgaag 4468636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 418 - 564
Target Start/End: Original strand, 25337501 - 25337647
Alignment:
Q  418 ttcaatataaataagtgatttttcacatagatctaggtttt-ttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacg 516  Q
    |||||| ||||||| ||||||| |||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||  |||  |    
T  25337501 ttcaatctaaataaatgatttt-cacataaatctaggtttttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgcgcggtg 25337599  T
Q  517 ttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||  ||| |||||||||||||||||||||||||||||||    
T  25337600 ttgtttgatttttcgtcttgttgcggtgttcatttgattcatattgaa 25337647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 388 - 561
Target Start/End: Complemental strand, 8028294 - 8028121
Alignment:
Q  388 aatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgtg 486  Q
    ||||||||| |||||||||||||||| |  |||||| ||||||||||||||| |||||||||||| ||||||| |||  |||||||||||||  ||||||    
T  8028294 aatcaccccacttcatctttttctctctgtttcaatctaaataagtgatttt-cacatagatctaagtttttttctttatgatttcatcatctaagtgtg 8028196  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    ||||| |||||||||||||||| |||| ||||||||||||||||||  |  | ||||||||||||||||||||||    
T  8028195 gtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcatcgtacggtgttcatttgattcatatt 8028121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 385 - 561
Target Start/End: Complemental strand, 7876224 - 7876047
Alignment:
Q  385 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgag 482  Q
    ||||||||||| ||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||| ||||||  ||| |  |||||||||||  ||    
T  7876224 taaaatcacccatcttcatctttttctctttatttcaatctaaataagtgatttt-cacatagatctagattttttttctttgcaatttcatcatctaag 7876126  T
Q  483 tgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    ||||||| | |||||||||||||||| |||||||||||||||||| || | ||  ||||||||||| ||||||||||||    
T  7876125 tgtggtgatttgttgttcgtcgtcttgtgcgacgttgtttgattttccatcttcgtgcggtgttcaattgattcatatt 7876047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 8496865 - 8497044
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttc---gtgatttcatcatccgagt 483  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||||||| |||||||||||||||||||| |||   ||  |||||||||   |||    
T  8496865 aaatcacccctcttcatctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggtttttttttctttgtagtttcatcatttaagt 8496963  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    | |||| | ||||||||||| |||| |||| |||||||||||||| ||| ||  |||||||||||||||||||||||||||    
T  8496964 gcggtgatttgttgttcgtcatcttgtgcggcgttgtttgatttctcgtcttcgtgcggtgttcatttgattcatattgaa 8497044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 12165741 - 12165916
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||| ||||||||||||||| |   || |||||| ||||||||||||||| ||||||||| ||||||||||||| ||| ||| ||||||  ||||||    
T  12165741 aaatcactcctcttcatctttttatgcctatttcaatctaaataagtgatttt-cacatagatttaggttttttctttgtggttttatcatctaagtgtg 12165839  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| |||||||||||||||| |||| ||||||| |||||| ||| || ||||||||||||||| ||||||||||||    
T  12165840 gtggtttgttgttcgtcgtcttgtgcggcgttgttcgatttcacgt-ttcttgcggtgttcatttaattcatattgaa 12165916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 381 - 564
Target Start/End: Complemental strand, 7881286 - 7881102
Alignment:
Q  381 gacttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatc 478  Q
    ||||| ||||||||  ||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||| ||||||  ||| |  |||||||||||    
T  7881286 gacttgaaatcacctttcttcatctttttctctttatttcaatctaaataagtgatttt-cacatagatctagattttttttctttgcaatttcatcatc 7881188  T
Q  479 cgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
      ||||||||| | |||||||||||||||| |||| ||||||||||||| || | ||  ||||||||||| |||||||||||||||    
T  7881187 taagtgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttcatgcggtgttcaattgattcatattgaa 7881102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 403 - 564
Target Start/End: Original strand, 35001506 - 35001667
Alignment:
Q  403 tctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgtggtggtgtgttgttcg 501  Q
    ||||||||||| || || ||| ||||||||||| |||| ||||||||||| ||||||| ||| ||||||||||||||  ||||||||||| |||||||||    
T  35001506 tctttttctctctattttaatctaaataagtgactttt-acatagatctatgtttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcg 35001604  T
Q  502 tcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||| |||| ||||||||| |||||||| || ||||||||||||||| |||| |||||||    
T  35001605 tcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaa 35001667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 10228579 - 10228756
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgt 485  Q
    ||||||||||||||||||||| ||||| || |||||| ||||||||||| |||| ||||| ||||| ||||||| ||| |||||||||||||   |||||    
T  10228579 aaatcacccctcttcatctttctctctctacttcaatctaaataagtgactttt-acatatatctatgtttttttctttgtgatttcatcatttaagtgt 10228677  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    | |||| |||||||||||||||| |||| ||||||||| |||||||| || ||| ||||||||||| |||  |||||||    
T  10228678 gatggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgtggtgttcattttatttctattgaa 10228756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 387 - 556
Target Start/End: Original strand, 4088359 - 4088529
Alignment:
Q  387 aaatcacccctcttcatctttttc-tctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtg 484  Q
    ||||||||| ||||||| |||||  ||| || | |||| ||||||||||||||| ||||||||||||| |||||| |||  |||||||||||||  ||||    
T  4088359 aaatcacccatcttcattttttttatctctattacaatctaaataagtgatttt-cacatagatctagttttttttctttttgatttcatcatctaagtg 4088457  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattc 556  Q
    ||||||| |||||||| ||||||| |||| |||||||||||||||||| ||  |||| ||||||||||||||    
T  4088458 tggtggtttgttgttcatcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcgatgttcatttgattc 4088529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 459 - 564
Target Start/End: Complemental strand, 4352101 - 4351996
Alignment:
Q  459 ttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcat 558  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||| | |||| |||||||||||||  || |||||| ||||||| ||||||    
T  4352101 ttcttcgtgatttcgtcatccgagtgtggtgatgtgttgttcgtcgtcttatgtggcgttatttgatttcccgtcatggtgcggtattcatttaattcat 4352002  T
Q  559 attgaa 564  Q
    ||||||    
T  4352001 attgaa 4351996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 4984754 - 4984567
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacata----gatctaggtttttt--------cttcgtgatttcat 474  Q
    ||||||| | |||||||||||| |||| || |||||| ||||||||||||||| ||||||    ||||||||||||||        ||| ||||||||||    
T  4984754 aaatcactcatcttcatctttt-ctctctatttcaatctaaataagtgatttt-cacatatatagatctaggtttttttgtttttcctttgtgatttcat 4984657  T
Q  475 catccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||  ||||||||||| |||||||||||||||| ||||  ||||||||||||||||| ||  || ||||||||||||||||||||||||    
T  4984656 catctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcgtgaggtgttcatttgattcatattgaa 4984567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 387 - 557
Target Start/End: Original strand, 17334675 - 17334848
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt----cttcgtgatttcatcatccgag 482  Q
    ||||||||  ||||||||||||||| | || |||||| ||||||||||||||| |||||||||||| |||||||    ||| || ||||||| |||  ||    
T  17334675 aaatcaccaatcttcatctttttctgtttatttcaatctaaataagtgatttt-cacatagatctaagttttttttttctttgtaatttcataatctaag 17334773  T
Q  483 tgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattca 557  Q
    ||||||| | |||||| ||||||||| |||| ||||||||||||| |||| ||  |||| || ||||||||||||    
T  17334774 tgtggtgatttgttgtacgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcgatgatcatttgattca 17334848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 397 - 478
Target Start/End: Original strand, 33109744 - 33109824
Alignment:
Q  397 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatc 478  Q
    ||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  33109744 tcttcatctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatc 33109824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 491 - 564
Target Start/End: Complemental strand, 26588577 - 26588504
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||| | |||||||| |||| |||||||||||||||||| |||||||||||||| |||| |||||||||||    
T  26588577 tgtgttgattgtcgtcttgtgcggcgttgtttgatttcccgtcttgttgcggtgttcgtttggttcatattgaa 26588504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 438 - 552
Target Start/End: Complemental strand, 1704276 - 1704162
Alignment:
Q  438 tttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgt 537  Q
    ||||||||||||| | |||||||||| || ||||  || || |||||||||| ||||||||||||  |||| ||| || || ||| ||||| ||| ||||    
T  1704276 tttcacatagatccatgttttttcttagtaattttgtcgtctgagtgtggtgttgtgttgttcgtgatcttgtgcaacattatttaatttctcgtcttgt 1704177  T
Q  538 tgcggtgttcatttg 552  Q
    |||||||||||||||    
T  1704176 tgcggtgttcatttg 1704162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 484 - 561
Target Start/End: Original strand, 33110608 - 33110685
Alignment:
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    |||||||| |||||||| ||||||| ||||  ||||||||||||| ||| ||  ||||||||||||||||||||||||    
T  33110608 gtggtggtttgttgttcatcgtcttgtgcggtgttgtttgatttctcgtcttcgtgcggtgttcatttgattcatatt 33110685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 465 - 564
Target Start/End: Complemental strand, 31575638 - 31575539
Alignment:
Q  465 gtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||| ||||| || || |||| | |||||||| ||||| | ||||||||||||||||||| ||| |||||||| ||||| | |||||| |||||||    
T  31575638 gtgatttcgtcatctgaatgcggtgttatgttgttcatcgtcatgtgcgacgttgtttgatttctcgtcttgttgcgatgttcgtctgattcctattgaa 31575539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 462 - 564
Target Start/End: Original strand, 30493488 - 30493590
Alignment:
Q  462 ttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    ||||||||||| || || ||||| |||| |||||||||||||||||| |||  ||||||||||||||   | |||||  ||||||| |||| ||||||||    
T  30493488 ttcgtgatttcctcgtctgagtgcggtgttgtgttgttcgtcgtcttgtgcagcgttgtttgatttcgtatcttgttctggtgttcgtttggttcatatt 30493587  T
Q  562 gaa 564  Q
    |||    
T  30493588 gaa 30493590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 491 - 564
Target Start/End: Original strand, 31296805 - 31296878
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||| || |||| |||| |||||||||||||  | | ||||||| |||||||||||||||||||||||    
T  31296805 tgtgttgttcatcatcttgtgcggcgttgtttgattttgcatcttgttgcagtgttcatttgattcatattgaa 31296878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 381 - 460
Target Start/End: Complemental strand, 5582835 - 5582757
Alignment:
Q  381 gacttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 460  Q
    ||||| |||||||| |||||||||||||||| |||| || ||| ||||||| ||| |||||| ||||||||| |||||||    
T  5582835 gacttgaaatcaccactcttcatctttttctttatattttaatctaaataaatga-ttttcaaatagatctaagtttttt 5582757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 491 - 564
Target Start/End: Original strand, 22571459 - 22571532
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||||||||| |||| |||||||||||||  ||| |||||  ||||||| |||| || ||||||||    
T  22571459 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttgcgttttgttatggtgttcgtttggttaatattgaa 22571532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 452 - 527
Target Start/End: Original strand, 7027799 - 7027874
Alignment:
Q  452 aggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgattt 527  Q
    ||||||||||   |||||||||||||   ||||||||||| |||||||||||||||| | ||  ||||||||||||    
T  7027799 aggttttttccctgtgatttcatcatttaagtgtggtggtttgttgttcgtcgtcttgtacggagttgtttgattt 7027874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Original strand, 8266545 - 8266588
Alignment:
Q  397 tcttcatctttttctctataattcaatataaataagtgattttt 440  Q
    ||||||||||||||||| || |||||| ||||||||||||||||    
T  8266545 tcttcatctttttctctctacttcaatctaaataagtgattttt 8266588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 494 - 528
Target Start/End: Original strand, 546014 - 546048
Alignment:
Q  494 gttgttcgtcgtcttatgcgacgttgtttgatttc 528  Q
    ||||||||||||||| |||||||||||||||||||    
T  546014 gttgttcgtcgtcttgtgcgacgttgtttgatttc 546048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 405 - 471
Target Start/End: Original strand, 13436705 - 13436770
Alignment:
Q  405 tttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgattt 471  Q
    ||||||||| || |||||| ||||||||||| |||||||||| |||||  |||||| ||||||||||    
T  13436705 tttttctctctatttcaatttaaataagtga-ttttcacataaatctatattttttattcgtgattt 13436770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 528
Target Start/End: Original strand, 1523389 - 1523426
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttc 528  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  1523389 tgtgttgttcgtcgtcttgtgcgacattgtttgatttc 1523426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 564
Target Start/End: Complemental strand, 34185798 - 34185725
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||| |||| |||||||| || |||||||||||||||  ||| |||||| ||||||| |||  |||||||||||    
T  34185798 tgtgctgtttgtcgtcttgtgtgacgttgtttgattttgcgtcttgttgtggtgttcttttagttcatattgaa 34185725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 457 - 561
Target Start/End: Complemental strand, 7976316 - 7976212
Alignment:
Q  457 ttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattc 556  Q
    |||| ||||||||||| || || ||||| | || |||||||||||||||||| |||| |||| ||| |||   ||| |||||| ||||||| |||  |||    
T  7976316 tttttttcgtgatttcgtcgtctgagtgcgttgttgtgttgttcgtcgtcttgtgcggcgttttttaattatgcgtcttgttgtggtgttcgtttagttc 7976217  T
Q  557 atatt 561  Q
    |||||    
T  7976216 atatt 7976212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 137; Significance: 3e-71; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 387 - 567
Target Start/End: Original strand, 33342344 - 33342524
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    |||||||||||||||||| |||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||    
T  33342344 aaatcacccctcttcatccttttttctctaattcaatctaaataagtgatttttcacatagatctaggttttttcttcgtgatttcgtcacccaagtgtg 33342443  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagat 567  Q
    |||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33342444 gtggtgtgttgttcttcgtcttatgcggcgttttttgatttcccgtattgttgcggtgtttatttgattcatattgaagat 33342524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 381 - 564
Target Start/End: Original strand, 16794194 - 16794376
Alignment:
Q  381 gacttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccg 480  Q
    ||||| ||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  16794194 gacttgaaatcacccatcttcatctttttctctctaattcaatctaaataagtgatttttcacataaatctaggtttt-tcttcgtgatttcatcatccg 16794292  T
Q  481 agtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    || |||||| | |||||||||||||||| ||| |||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  16794293 agagtggtgttatgttgttcgtcgtcttgtgcaacgtcgtttgatttcccgtattgttacggtgttcatttgattcatattgaa 16794376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 385 - 564
Target Start/End: Original strand, 35580363 - 35580541
Alignment:
Q  385 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtg 484  Q
    ||||||||| | ||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||    
T  35580363 taaaatcactcatcttcatctttttctctctatttcaatttaaataagtgatttt-cacatagatctaggttttttcttcgtgatttcatcatctaagtg 35580461  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||| |||||||||||||||| |||||||||||||||||| |||| || ||||||||||| ||||||||||||||||    
T  35580462 tggtggtttgttgttcgtcgtcttgtgcgacgttgtttgattttccgtcttcttgcggtgttcgtttgattcatattgaa 35580541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 385 - 564
Target Start/End: Complemental strand, 44100111 - 44099934
Alignment:
Q  385 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtg 484  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||| ||||| |||||||||||| |||||||||| ||||||| ||||||  ||||    
T  44100111 taaaatcacccctcttcatctttttctctatatttcaatctaaataagttatttt-cacatagatctaagttttttctttgtgattt-atcatctaagtg 44100014  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||| |||||||||||||||| |||| |||||||||||||||||| || ||||||||||||||||||||||||||||    
T  44100013 tggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttttgcggtgttcatttgattcatattgaa 44099934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 387 - 567
Target Start/End: Original strand, 11196799 - 11196976
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    |||||| || |||||||||||||||||||  |||||| ||||||||||||||| |||||||||||||||||||||||  |||||||||||||  ||||||    
T  11196799 aaatcatccatcttcatctttttctctat--ttcaatctaaataagtgatttt-cacatagatctaggttttttctttttgatttcatcatctaagtgtg 11196895  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagat 567  Q
    ||||| |||||||||||||||| |||| ||||||||||||| |||| || |||||||||||||||||||||||||||||||    
T  11196896 gtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattgaagat 11196976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 387 - 567
Target Start/End: Original strand, 11725589 - 11725768
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||||||||||| ||||||||||| || |||||| |||||||||| ||||||||||||||||||||||||||||  |||||||||||||  ||||||    
T  11725589 aaatcacccctcttcgtctttttctctttatttcaatctaaataagtg-tttttcacatagatctaggttttttctttttgatttcatcatctaagtgtg 11725687  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagat 567  Q
    ||||| |||||||| ||||||| |||||| |||||||||||||| | || ||||||||||||| |||||||||||||||||    
T  11725688 gtggtttgttgttcatcgtcttgtgcgacattgtttgatttcccattttcttgcggtgttcatctgattcatattgaagat 11725768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 28239740 - 28239917
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    |||||||| |||||||||||||||||| || |||||| |||||||||| ||||||||||||||||||||||| ||| || |||||| ||||  |||||||    
T  28239740 aaatcacctctcttcatctttttctctctatttcaatctaaataagtgttttttcacatagatctaggttttctctacgcgatttcgtcatttgagtgtg 28239839  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    | ||| |||||||||||||||| |||| |||||||||||| | |||||||||||||||||||||||||| ||||||||    
T  28239840 gcggtttgttgttcgtcgtcttgtgcggcgttgtttgattcctcgtattgttgcggtgttcatttgattaatattgaa 28239917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 397 - 567
Target Start/End: Original strand, 19876129 - 19876298
Alignment:
Q  397 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgtt 496  Q
    |||||||||||||||| ||| |||||| ||||||||||||||| |||||||||| |||||||||||| ||||||||||||||  ||||| ||||| ||||    
T  19876129 tcttcatctttttctcaatatttcaatctaaataagtgatttt-cacatagatcaaggttttttctttgtgatttcatcatctaagtgtagtggtttgtt 19876227  T
Q  497 gttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagat 567  Q
    |||||||||||| |||| |||||||||||| ||||| || ||| |||||||||||||||||||||||||||    
T  19876228 gttcgtcgtcttgtgcggcgttgtttgattccccgtcttcttgtggtgttcatttgattcatattgaagat 19876298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 406 - 564
Target Start/End: Complemental strand, 43192503 - 43192346
Alignment:
Q  406 ttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgt 505  Q
    |||||||| || |||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||    
T  43192503 ttttctctctatttcaatctaaataagtggttttt-acatagatctaggttttttcttcgtgatttcatcatctaagtgtggtggtttgttgttcgtcgt 43192405  T
Q  506 cttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||| |||| ||||||||||||| |||| || ||| |||||||||||||||||| |||||    
T  43192404 cttgtgcggcgttgtttgattttccgtcttcttgtggtgttcatttgattcattttgaa 43192346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 388 - 564
Target Start/End: Original strand, 2655777 - 2655954
Alignment:
Q  388 aatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgagtgt 485  Q
    |||||||| ||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||| ||||||  ||| || |||||||||||  |||||    
T  2655777 aatcacccatcttcatctttttctctttatttcaatctaaataagtgatttt-cacatagatctagattttttttctttgtaatttcatcatctaagtgt 2655875  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||| | |||||||||||||||| |||  |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  2655876 ggtgatttgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaa 2655954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 387 - 561
Target Start/End: Complemental strand, 15597344 - 15597170
Alignment:
Q  387 aaatcacccctcttcatctttttctc-tataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgt 485  Q
    |||||||||||||||||||||||||  |  | |||||| ||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||    
T  15597344 aaatcacccctcttcatctttttctagtccatttcaatctaaataagtgatttt-cacatagatctaggttttttcttcatgatttcgtcatccgagtgt 15597246  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
     ||||||||||||| |||||||| || | | ||| ||||||| |||| ||||| ||||||||||||||||||||||    
T  15597245 agtggtgtgttgtttgtcgtcttgtgaggccttggttgattttccgttttgttacggtgttcatttgattcatatt 15597170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 381 - 564
Target Start/End: Complemental strand, 27747295 - 27747113
Alignment:
Q  381 gacttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccg 480  Q
    ||||| ||||||||  ||||||||||||| |||  | |||||| ||||||||| ||||| |||||| || || |||||||||||||||||||| |||| |    
T  27747295 gacttgaaatcaccattcttcatctttttatctccatttcaatttaaataagtaatttt-cacataaatataagttttttcttcgtgatttcaccatctg 27747197  T
Q  481 agtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
     |||||||||||||||||||||| |||| ||||||  |||||||||||| || |||||||||||||||||||||||||||||||    
T  27747196 ggtgtggtggtgtgttgttcgtcatcttgtgcgacagtgtttgatttcctgttttgttgcggtgttcatttgattcatattgaa 27747113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 4808871 - 4809048
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgt 485  Q
    |||| |||||||||||||||||| ||| || |||||| ||||||||||||||| ||||||||||||| |||||| ||| || |||||||||||  |||||    
T  4808871 aaattacccctcttcatctttttttctttatttcaatgtaaataagtgatttt-cacatagatctagctttttttctttgtaatttcatcatctaagtgt 4808969  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||| | |||||||||||||||| |||| ||||||||||||| |||| ||  |||||||||||||||||||||||||||    
T  4808970 ggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaa 4809048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 9619535 - 9619357
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttct--tcgtgatttcatcatccgagtg 484  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||||||| ||||||||| ||| |||||| |  | || |||||||||||   |||    
T  9619535 aaatcacccctcttcatctttttctctttatttcaatctaaataagtgatttt-cacatagatttagattttttttcattgtaatttcatcatctacgtg 9619437  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| | |||||||||||||||| |||| |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  9619436 tggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaa 9619357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 42448205 - 42448027
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttt--ttcttcgtgatttcatcatccgagtg 484  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||||||  || |||||||||||||||  ||||| ||||||||||||||  ||||    
T  42448205 aaatcacccctcttcatctttttctctctatttcaatctaaataagtgattta-catatagatctaggttttgtttctttgtgatttcatcatctaagtg 42448107  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||| ||| |||||||||||||||| |||| | |||||||||||  ||| ||  |||||||||||||||||||||||||||    
T  42448106 tggaggtttgttgttcgtcgtcttgtgcggcattgtttgatttttcgtcttcgtgcggtgttcatttgattcatattgaa 42448027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 43890302 - 43890124
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgagtg 484  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||||  |||||||||||| ||||||  ||| || |||||||||||  |||     
T  43890302 aaatcacccctcttcatctttttctctttaattcaatctaaataagtgattttg-acatagatctagattttttttctttgtaatttcatcatctaagta 43890204  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| | |||||||||||||||| ||||||||| ||||||||||||| ||  | ||||||||||||||||||| |||||    
T  43890203 tggtgatttgttgttcgtcgtcttgtgcgacgttatttgatttcccgtcttcgtacggtgttcatttgattcattttgaa 43890124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 385 - 556
Target Start/End: Original strand, 33895986 - 33896158
Alignment:
Q  385 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgag 482  Q
    |||| |||||||||||||||||||||||| || || ||| ||||||||||| ||| ||||||||||||||||||||  ||| ||||||||||||||  ||    
T  33895986 taaagtcacccctcttcatctttttctctctatttaaatctaaataagtgacttt-cacatagatctaggttttttttctttgtgatttcatcatctaag 33896084  T
Q  483 tgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattc 556  Q
    ||||||||| ||||||||||| |||| |||| ||||||||| |||||||| || ||||||||||||||| ||||    
T  33896085 tgtggtggtttgttgttcgtcttcttgtgcggcgttgtttgttttcccgtcttcttgcggtgttcattttattc 33896158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 381 - 564
Target Start/End: Original strand, 9072618 - 9072802
Alignment:
Q  381 gacttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatc 478  Q
    ||||| ||||||||||||||||||||||||||| || |||||| ||||||||||| ||| |||||| |||||| ||||||  ||| ||||||||||||||    
T  9072618 gacttgaaatcacccctcttcatctttttctctctatttcaatttaaataagtgacttt-cacataaatctagattttttttctttgtgatttcatcatc 9072716  T
Q  479 cgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
      ||||||||||| |||||||| || |||| |||| ||||||||| |||||| | || ||||||||||||||| |||| |||||||    
T  9072717 taagtgtggtggtttgttgttcttcatcttgtgcggcgttgtttgctttcccatcttcttgcggtgttcattttattcctattgaa 9072802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 34611711 - 34611888
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgt 485  Q
    ||||||| | ||||||| ||||||| | || |||| | ||||||||||||||| |||||| ||||||||||||| ||| ||||||||||||||  |||||    
T  34611711 aaatcactcatcttcatatttttctttctatttcagtctaaataagtgatttt-cacataaatctaggtttttttctttgtgatttcatcatctaagtgt 34611809  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||| |||||||||||||||| |||| ||||||||||||| ||||  |  |||||||||||||||||||||||||||    
T  34611810 ggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcgtcgtgcggtgttcatttgattcatattgaa 34611888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 387 - 561
Target Start/End: Complemental strand, 9498779 - 9498602
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt----cttcgtgatttcatcatccgag 482  Q
    ||||||||||||||||||||||| ||| || |||||| ||||||||||||||| ||||||||| ||||||||||    ||| || |||||||||||  ||    
T  9498779 aaatcacccctcttcatctttttatctttatttcaatctaaataagtgatttt-cacatagatttaggttttttttttctttgtaatttcatcatctaag 9498681  T
Q  483 tgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    ||||||| | |||||||||| ||||| |||| | |||||||||||||||| ||  ||||||||||||||||||||||||    
T  9498680 tgtggtgatttgttgttcgttgtcttgtgcggctttgtttgatttcccgtcttcgtgcggtgttcatttgattcatatt 9498602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 387 - 561
Target Start/End: Complemental strand, 14907101 - 14906926
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtt--ttttcttcgtgatttcatcatccgagtg 484  Q
    ||||||||| ||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||||||  ||||||| || |||||||||||  | ||    
T  14907101 aaatcacccatcttcatctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggttctttttctttgtaatttcatcatcaaaatg 14907003  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    ||||| | ||||||| |||||||| |||| |||||||||||||||||| ||  |||| |||||||||||||| ||||    
T  14907002 tggtgatttgttgtttgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcgatgttcatttgattcgtatt 14906926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 15046800 - 15046978
Alignment:
Q  387 aaatcacccctcttcatctttttctc-tataattcaatataaataagtgatttttcacatagatctaggtttt-ttcttcgtgatttcatcatccgagtg 484  Q
    |||||||| ||||||||||||||||  |  | ||||||  || ||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||    
T  15046800 aaatcacctctcttcatctttttctagtccatttcaattcaagtaagtgatttt-cacatagatctaggtttttttcttcgtgatttcgtcatccgagtg 15046898  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||||||||||||||| ||||  | |||||||||||| || ||| |||| |||| |||||||| ||||||||    
T  15046899 tggtggtgtgttgttcgtcgtcttgtgcggtgctgtttgatttcctgtcttggtgcgatgtttatttgattgatattgaa 15046978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 385 - 564
Target Start/End: Original strand, 44577941 - 44578120
Alignment:
Q  385 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagt 483  Q
    ||||||||| ||||||||||||||||||| || |||||| ||| ||||||||||  |||||||||||||||||||| ||| || |||||||||||  |||    
T  44577941 taaaatcactcctcttcatctttttctctctatttcaatctaactaagtgattta-cacatagatctaggtttttttctttgtaatttcatcatctaagt 44578039  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||| |||||||||||||||| |||| |||||||| || |||| | ||  |||||| || |||||||| ||||||||    
T  44578040 gtggtggtttgttgttcgtcgtcttgtgcggcgttgtttcatctcccatcttcatgcggtatttatttgatttatattgaa 44578120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 11464079 - 11464255
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgagtg 484  Q
    |||||||||||||||||  | |||||| || |||||| | ||||||||||||| ||||||||||||| ||||||  ||| || |||||||||||  ||||    
T  11464079 aaatcacccctcttcat--tcttctctttatttcaatttgaataagtgatttt-cacatagatctagattttttttctttgtaatttcatcatctaagtg 11464175  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| | |||||||||||||||| |||| ||||||||||||||  || ||  |||||||||||||||||||||||||||    
T  11464176 tggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttctagtctttgtgcggtgttcatttgattcatattgaa 11464255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 415 - 560
Target Start/End: Original strand, 33298791 - 33298935
Alignment:
Q  415 taattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcga 514  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||  ||| |||||||| |||||| ||| | |||||||||||||| ||||||| || |     
T  33298791 taattcaatctaaataagtgatttt-cacatagatctaggttttacctttgtgatttcgtcatccaagtctagtggtgtgttgttcatcgtcttgtgtgg 33298889  T
Q  515 cgttgtttgatttcccgtattgttgcggtgttcatttgattcatat 560  Q
     ||||||||||||| ||| ||| |||||||||||||||||||||||    
T  33298890 tgttgtttgatttctcgtcttgctgcggtgttcatttgattcatat 33298935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 418 - 564
Target Start/End: Complemental strand, 39153291 - 39153142
Alignment:
Q  418 ttcaatataaataagtgatttttcacatagatctaggt----tttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcg 513  Q
    |||||| ||||||||||||||| ||||||||| |||||    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||      
T  39153291 ttcaatttaaataagtgatttt-cacatagatttaggtattttttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgtc 39153193  T
Q  514 acgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
     ||||||| |||||| ||| ||||| || | ||||||||||||| ||||||    
T  39153192 gcgttgttcgatttcgcgtcttgttacgattttcatttgattcacattgaa 39153142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 29777136 - 29777303
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgt 485  Q
    ||||||| ||||||||||||||||||| || |||||| |||||||| ||           |||||||||||||| ||| ||||||||||||||  |||||    
T  29777136 aaatcactcctcttcatctttttctctctatttcaatctaaataagcga-----------gatctaggtttttttctttgtgatttcatcatctaagtgt 29777224  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||| |||||||||||||||| |||||| ||||||| |||||||| || ||||||||||||||| |||| |||||||    
T  29777225 ggtggtttgttgttcgtcgtcttgtgcgacattgtttgctttcccgtcttcttgcggtgttcattttattcctattgaa 29777303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 32724665 - 32724481
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctag---------gttttttcttcgtgatttcatcat 477  Q
    |||||||  ||||||||||||| |||| || |||||| ||||||||||||||| |||||||||||||         ||||||||||  ||||||||||||    
T  32724665 aaatcacttctcttcatctttt-ctctctatttcaatctaaataagtgatttt-cacatagatctagattttttttgttttttctttatgatttcatcat 32724568  T
Q  478 ccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |  | ||||||||| |||||||||||||||| |||| ||||||||||||||| || ||  ||| |||||||||||||||||||||||    
T  32724567 ctaactgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttccagtcttcgtgcagtgttcatttgattcatattgaa 32724481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 37566057 - 37565879
Alignment:
Q  387 aaatcacccctcttcatctttttc-tctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtg 484  Q
    ||||||||| ||||||| |||||  ||| || |||||| ||||||| ||||||| ||||||||| |||||||||| ||| | ||||||||||||  ||||    
T  37566057 aaatcacccttcttcattttttttatctctatttcaatctaaataattgatttt-cacatagatttaggtttttttctttgagatttcatcatctaagtg 37565959  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||| |||| ||||||||||| |||| | ||||||||||| || |  |  ||||| |||||||||||||||||||||    
T  37565958 tggtggtttgttattcgtcgtcttgtgcggcattgtttgattttccttcgtcgtgcggcgttcatttgattcatattgaa 37565879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 386 - 564
Target Start/End: Original strand, 36532804 - 36532981
Alignment:
Q  386 aaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgt 485  Q
    ||||||| || |||| || ||||| ||| || |||||| |||||||| || |||||||||| || ||||||||||||||| | ||| ||| ||   ||||    
T  36532804 aaaatcatccatcttaatttttttatctctatttcaatttaaataag-gagttttcacatatatttaggttttttcttcgaggttttatcgtctaggtgt 36532902  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||| |||||||||||||||||| ||||  ||||||||||||| | | |||||  |||||| ||||| ||| |||||||    
T  36532903 ggtgttgtgttgttcgtcgtcttgtgcggtgttgtttgatttctcattttgttttggtgtttatttggttcctattgaa 36532981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 501 - 564
Target Start/End: Complemental strand, 23851557 - 23851494
Alignment:
Q  501 gtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||| ||||||||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  23851557 gtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaa 23851494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 387 - 498
Target Start/End: Original strand, 17949154 - 17949265
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctag-gttttttcttcgtgatttcatcatccgagtgt 485  Q
    |||||||||||||||| |||||||||| || |||||| |||||||| || ||||||||||||||| |  |||||| || ||||||||||||||  |||||    
T  17949154 aaatcacccctcttcacctttttctctctatttcaatctaaataagcga-ttttcacatagatcttgatttttttatttgtgatttcatcatctaagtgt 17949252  T
Q  486 ggtggtgtgttgt 498  Q
    | |||| ||||||    
T  17949253 gatggtttgttgt 17949265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 486 - 564
Target Start/End: Complemental strand, 29617382 - 29617304
Alignment:
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||| |||||||||||||||||| |||| || ||||||||||| ||| |||||||||||||| |||| ||| |||||||    
T  29617382 ggtgttgtgttgttcgtcgtcttgtgcggcgctgtttgatttcgcgtcttgttgcggtgttcgtttggttcttattgaa 29617304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 467 - 564
Target Start/End: Original strand, 5333391 - 5333488
Alignment:
Q  467 gatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||| ||||| ||||| |||| |||||||||||||||||| ||||  ||||||||||||  ||| ||||| |||||||| |||| ||| |||||||    
T  5333391 gatttcgtcatctgagtgcggtgttgtgttgttcgtcgtcttgtgcggtgttgtttgattttgcgtcttgttccggtgttcgtttggttcctattgaa 5333488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 455 - 528
Target Start/End: Complemental strand, 20227419 - 20227346
Alignment:
Q  455 ttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttc 528  Q
    ||||||||||||||||||||| || ||||| |  | ||| |||||||||||||| |||||||||||||||||||    
T  20227419 ttttttcttcgtgatttcatcgtctgagtgcgtcgttgtattgttcgtcgtcttctgcgacgttgtttgatttc 20227346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 459 - 564
Target Start/End: Complemental strand, 24099390 - 24099285
Alignment:
Q  459 ttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcat 558  Q
    |||||||||||||| || || ||||| |  | |||||||||||||||| | | |  |||||||||||||| | | ||||||||||||||||||| |||||    
T  24099390 ttcttcgtgatttcgtcgtctgagtgcgacgttgtgttgttcgtcgtcctgtaccgcgttgtttgatttcgcatcttgttgcggtgttcatttggttcat 24099291  T
Q  559 attgaa 564  Q
    ||||||    
T  24099290 attgaa 24099285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 498 - 564
Target Start/End: Original strand, 15889574 - 15889640
Alignment:
Q  498 ttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||||| |||| ||||||||||||| || | | |||||| ||||||||||||||||||||||    
T  15889574 ttcgtcgtcttgtgcggcgttgtttgattttccttctggttgcgatgttcatttgattcatattgaa 15889640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 491 - 564
Target Start/End: Original strand, 3240366 - 3240439
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||||||||| | ||||||||||||||||| ||| |||||| ||||||  |||| || ||||||||    
T  3240366 tgtgttgttcgtcgtcttgtacgacgttgtttgatttcgcgtgttgttgtggtgtttgtttggttaatattgaa 3240439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 481 - 557
Target Start/End: Complemental strand, 8443624 - 8443548
Alignment:
Q  481 agtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattca 557  Q
    |||| |||| |||||||||||||||||| |||| |||||||||||| | ||| ||||||| |||||| |||| ||||    
T  8443624 agtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgattccgcgtcttgttgcagtgttcgtttggttca 8443548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 491 - 551
Target Start/End: Complemental strand, 24853511 - 24853451
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcattt 551  Q
    |||||||||||||||| | || ||| |||||||||||| ||| ||||||||||||||||||    
T  24853511 tgtgttgttcgtcgtcctgtgtgacattgtttgatttctcgtcttgttgcggtgttcattt 24853451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 17427395 - 17427216
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt---cttcgtgatttcatcatccgagt 483  Q
    ||||| ||| || |||||||||||||| || |||| | |||||||||| |||| || |||||||||||||||||   |||||| ||||| ||||  ||||    
T  17427395 aaatcccccatcatcatctttttctctctatttcagtgtaaataagtgctttt-caaatagatctaggttttttcttcttcgttatttcgtcatatgagt 17427297  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||    |||||| ||| ||||||| |||| |||||||| ||||   || ||| | || |||||||||| ||| |||||||    
T  17427296 gtgacattgtgttattcttcgtcttgtgcgccgttgtttaattttttgtcttgctacgatgttcatttgcttcttattgaa 17427216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 17431045 - 17430866
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt---cttcgtgatttcatcatccgagt 483  Q
    ||||| ||| || |||||||| ||||| ||  ||||| |||||||||| |||| || |||||||||||||||||   |||||| ||||| ||||| ||||    
T  17431045 aaatcccccatcatcatctttctctctctatgtcaatctaaataagtgctttt-cagatagatctaggttttttcttcttcgttatttcgtcatctgagt 17430947  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||    |||||| ||| || |||| |||| |||||||| ||||| ||| ||| | |  |||||||||| ||| |||||||    
T  17430946 gtgacattgtgttattcttcatcttgtgcgtcgttgtttaatttctcgtcttggtacaatgttcatttgcttcttattgaa 17430866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 397 - 564
Target Start/End: Original strand, 18733938 - 18734103
Alignment:
Q  397 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctag-gttttttcttcgtgatttcatcatccgagtgtggtggtgtgt 495  Q
    ||||||||||||||||| || |||||| ||||||| |||||||  | |||||||| |  ||||||||||||||| ||||| ||  | ||||  | |||||    
T  18733938 tcttcatctttttctctctatttcaatttaaataattgatttt--aaatagatctggttttttttcttcgtgatatcatcgtctcaatgtgacgatgtgt 18734035  T
Q  496 tgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||| |||||| |||| || || || ||||| | | |||||| |||||| ||||| || ||||||||    
T  18734036 tgttcgccgtcttgtgcggcgatg-ttaatttctcttcttgttgtggtgtttatttgttttatattgaa 18734103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 491 - 528
Target Start/End: Complemental strand, 18890806 - 18890769
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttc 528  Q
    |||||||||||||||||| |||||||||||||||||||    
T  18890806 tgtgttgttcgtcgtcttgtgcgacgttgtttgatttc 18890769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 437 - 549
Target Start/End: Original strand, 36568629 - 36568742
Alignment:
Q  437 ttttcacatagatctaggttttttc-ttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtatt 535  Q
    |||||||||| |||||| ||||||| ||||| ||| |||||||  |  |||||| |||||||||||||||||| ||| |  ||||||||||||  || |     
T  36568629 ttttcacatatatctagattttttccttcgtaattccatcatcacaaagtggtgttgtgttgttcgtcgtcttgtgcaagtttgtttgatttcttgtctc 36568728  T
Q  536 gttgcggtgttcat 549  Q
    | ||||||||||||    
T  36568729 gatgcggtgttcat 36568742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 564
Target Start/End: Original strand, 8826200 - 8826270
Alignment:
Q  493 tgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||||||| || | |||||| ||| |||  || |||||||||||||| ||||||||||||||||    
T  8826200 tgttgttcgtcgtcttgtgtggcgttgtgtgaattcgtgtcttgttgcggtgttc-tttgattcatattgaa 8826270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 564
Target Start/End: Complemental strand, 1236799 - 1236727
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||| ||||| |||| |||||||||||||  | | ||||||||||||||  ||| |||||||||||    
T  1236799 tgtgttgttcgttgtcttgtgcggcgttgtttgatttggcatcttgttgcggtgttc-gttggttcatattgaa 1236727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 564
Target Start/End: Complemental strand, 1239499 - 1239427
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||| ||||||| |||| |||||||||||||  | | ||||||||||||||  ||| |||||||||||    
T  1239499 tgtgttgttcatcgtcttgtgcggcgttgtttgatttggcatcttgttgcggtgttc-gttggttcatattgaa 1239427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 564
Target Start/End: Original strand, 3673420 - 3673500
Alignment:
Q  481 agtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||| |||| |||||||||||||||||||||   || |||||||||||  || |||||||||||||| |||  ||| |||||||    
T  3673420 agtgcggtgttgtgttgttcgtcgtcttatg---cggtgtttgatttcgtgtcttgttgcggtgttcctttagttcctattgaa 3673500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 564
Target Start/End: Original strand, 15344295 - 15344367
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||||||||| |||| ||| |||||||||  | | ||||||||||||||  ||| |||||||||||    
T  15344295 tgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttc-gttggttcatattgaa 15344367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 564
Target Start/End: Original strand, 15433360 - 15433432
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||||||||| |||| ||| |||||||||  | | ||||||||||||||  ||| |||||||||||    
T  15433360 tgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttc-gttggttcatattgaa 15433432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 564
Target Start/End: Original strand, 15524664 - 15524736
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||||||||| |||| ||| |||||||||  | | ||||||||||||||  ||| |||||||||||    
T  15524664 tgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttc-gttggttcatattgaa 15524736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 525
Target Start/End: Complemental strand, 25241767 - 25241640
Alignment:
Q  399 ttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttc--ttcgtgatttcatcatccgagtgtggtggtgtgtt 496  Q
    ||||||||||||| | || |||||| | ||||||||||| | |||||| || ||| |||||||  ||| ||||||| || || |||| || || | ||||    
T  25241767 ttcatctttttctttctatttcaatctcaataagtgattgt-cacataaatttagattttttcccttcatgatttcgtcgtctgagtatgatgctatgtt 25241669  T
Q  497 gttcgtcgtcttatgcgacgttgtttgat 525  Q
    ||||||| |||||||  ||||||||||||    
T  25241668 gttcgtcatcttatggaacgttgtttgat 25241640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 517 - 565
Target Start/End: Complemental strand, 34412097 - 34412050
Alignment:
Q  517 ttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaag 565  Q
    |||||||||||||||| ||||||| ||||||||||||||  ||||||||    
T  34412097 ttgtttgatttcccgtcttgttgc-gtgttcatttgatttctattgaag 34412050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 3e-65; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 381 - 567
Target Start/End: Original strand, 15570806 - 15570991
Alignment:
Q  381 gacttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccg 480  Q
    ||||| |||||| |||||||||||||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||||| |||||||| ||| |||    
T  15570806 gacttgaaatcatccctcttcatctttttctctataattcaatctaaatatttgatttttcacatagatgtaggttttttctttgtgatttcgtcacccg 15570905  T
Q  481 agtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagat 567  Q
    |||||||||||||||||||||||||||||||||  ||||||||| ||||| |||||||| |||||||||||||||||||||||||||    
T  15570906 agtgtggtggtgtgttgttcgtcgtcttatgcggtgttgtttga-ttcccatattgttgtggtgttcatttgattcatattgaagat 15570991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 385 - 564
Target Start/End: Complemental strand, 2058017 - 2057838
Alignment:
Q  385 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagt 483  Q
    ||||||||||||||||||||||||||||| || |||||| ||||||||||||||| |||||||||||||||||||| |||  |||||||||||||  |||    
T  2058017 taaaatcacccctcttcatctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggtttttttctttatgatttcatcatctaagt 2057919  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||| ||||||||||||||||  ||| |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  2057918 gtggtggtttgttgttcgtcgtcttgcgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaa 2057838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 385 - 564
Target Start/End: Complemental strand, 36344668 - 36344491
Alignment:
Q  385 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtg 484  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||| ||||| ||||| |||||| |||||||||| ||||||| ||||||  ||||    
T  36344668 taaaatcacccctcttcatctttttctctatatttcaatctaaataagttatttt-cacatggatctaagttttttctttgtgattt-atcatctaagtg 36344571  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||| |||||||||||||||| |||| ||||||||||||| |||| || ||||||||||||||||||||||||||||    
T  36344570 tggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtttttttgcggtgttcatttgattcatattgaa 36344491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 27267037 - 27266859
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgagtg 484  Q
    ||||||||||||||||| ||||||||| || |||||| ||||||||||||||| ||||||||||||||||||||  ||| ||||||||||||||  ||||    
T  27267037 aaatcacccctcttcatatttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttttctttgtgatttcatcatctaagtg 27266939  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||| |||||||||||||||| |||| |  ||||||||||||||| ||  |||||||||||||||||||||||||||    
T  27266938 tggtggtttgttgttcgtcgtcttgtgcggcactgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaa 27266859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 406 - 569
Target Start/End: Original strand, 30298130 - 30298292
Alignment:
Q  406 ttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgt 505  Q
    ||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||  |||||||||||||  ||||||||||| |||||||||||||    
T  30298130 ttttctctatatttcaatctaaataagtgatttt-cacatagatctaggttttttctttatgatttcatcatctaagtgtggtggtttgttgttcgtcgt 30298228  T
Q  506 cttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagattg 569  Q
    ||| |||| || |||||||||| |||| || |||||||||| ||||||||||||||||||||||    
T  30298229 cttgtgcggcgctgtttgattttccgtcttcttgcggtgtttatttgattcatattgaagattg 30298292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 387 - 567
Target Start/End: Original strand, 781292 - 781471
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||||| |||||||||||||||||||| |||||| ||||||||||||||| || ||||||||||| |||||||| ||||||||||||||  ||| ||    
T  781292 aaatcacccatcttcatctttttctctatatttcaatctaaataagtgatttt-cagatagatctagggtttttctttgtgatttcatcatctaagtatg 781390  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagat 567  Q
    ||||| |||||||||||||| | |||| |  ||||||||||||||| || ||||||||||||| |||||||| ||||||||    
T  781391 gtggtttgttgttcgtcgtcatgtgcggcactgtttgatttcccgtcttcttgcggtgttcatctgattcattttgaagat 781471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 18677643 - 18677465
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgagtg 484  Q
    |||||| |||||||||||||||||||| || || ||| ||||||||||||||| ||||||||||||||||||||  ||| ||||||||||||||  ||||    
T  18677643 aaatcatccctcttcatctttttctctctattttaatctaaataagtgatttt-cacatagatctaggttttttttctttgtgatttcatcatctaagtg 18677545  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||| |||||||||||||||| || ||||||||||||||| |||| ||  | |||||||||||||||||||||||||    
T  18677544 tggtggtttgttgttcgtcgtcttgtgggacgttgtttgattttccgtcttcgtacggtgttcatttgattcatattgaa 18677465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 387 - 567
Target Start/End: Complemental strand, 21060458 - 21060279
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    |||||||| ||||||||||||||||||||| |||||| ||||||||||||||| ||||||||| ||||||||||||||||||| ||||||||  ||||||    
T  21060458 aaatcaccactcttcatctttttctctatatttcaatctaaataagtgatttt-cacatagatgtaggttttttcttcgtgatgtcatcatctaagtgtg 21060360  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagat 567  Q
    ||||| |||||||||||||||| |||| |  | ||||||||||||| || |||| |||||||| | |||||| ||||||||    
T  21060359 gtggtttgttgttcgtcgtcttgtgcggcactttttgatttcccgtcttcttgcagtgttcatctaattcattttgaagat 21060279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 387 - 567
Target Start/End: Complemental strand, 35475513 - 35475334
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    |||||||| ||||||||||| || |||||| |||||| ||||||||||||||| ||||||||||||| ||||||||| |||||||||||||    |||||    
T  35475513 aaatcacctctcttcatcttgttatctatatttcaatctaaataagtgatttt-cacatagatctagattttttctttgtgatttcatcatttacgtgtg 35475415  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagat 567  Q
    ||||| ||||||||||||| ||||||| || ||||||||||| ||| || ||||||||||||||||||||||||| |||||    
T  35475414 gtggtttgttgttcgtcgttttatgcggcgctgtttgatttctcgtcttcttgcggtgttcatttgattcatattaaagat 35475334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 397 - 561
Target Start/End: Original strand, 42886392 - 42886554
Alignment:
Q  397 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgtt 496  Q
    |||||||| |||||||| || ||||||  ||||||||| |||| ||||||||| |||||||| ||||||||||||||||||| |||||||||||||||||    
T  42886392 tcttcatccttttctctctatttcaatcaaaataagtgctttt-cacatagatttaggtttt-tcttcgtgatttcatcatctgagtgtggtggtgtgtt 42886489  T
Q  497 gttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    |||||||||||| |||| |||||||||||||||||  ||||||| ||||||||||||||||||||    
T  42886490 gttcgtcgtcttgtgcggcgttgtttgatttcccgccttgttgcagtgttcatttgattcatatt 42886554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 411 - 569
Target Start/End: Original strand, 27751853 - 27752010
Alignment:
Q  411 tctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttat 510  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||  ||||||||||| |||||||||||| ||| |    
T  27751853 tctatatttcaatataaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgcctttt 27751951  T
Q  511 gcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagattg 569  Q
    | | || | ||||||||||||| || |||||||||||||||||||||||||||| ||||    
T  27751952 ggggcgctatttgatttcccgtcttcttgcggtgttcatttgattcatattgaatattg 27752010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 43261994 - 43261819
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||||| ||||||||||||| ||| || |||||| ||||||||||||||| ||||||||||||||||||  ||| ||||||| ||||||  ||||||    
T  43261994 aaatcacccatcttcatctttttatctctatttcaatctaaataagtgatttt-cacatagatctaggttttc-ctttgtgattttatcatctaagtgtg 43261897  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| |||||||||||||||||||||  |||||||||||| |||| || |||||||||| |||||||||||||||||    
T  43261896 gtggtttgttgttcgtcgtcttatgcggtgttgtttgattttccgtcttcttgcggtgtttatttgattcatattgaa 43261819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 30371627 - 30371805
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgagtg 484  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||||||||||  ||| || |||||||||||  ||||    
T  30371627 aaatcacccctcttcatctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatctaagtg 30371725  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| | ||||||||||| |||| |||| |||||||||||||||| | ||  |||||||||||||| ||||||||||||    
T  30371726 tggtgatttgttgttcgtcatcttgtgcggcgttgtttgatttcccatcttcgtgcggtgttcatttaattcatattgaa 30371805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 387 - 556
Target Start/End: Complemental strand, 7150512 - 7150343
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgt 485  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||| ||| |||||||||||| ||||||| ||| ||| ||||||||||  |||||    
T  7150512 aaatcacccctcttcatctttttctctctatttcaatctaaataagtgacttt-cacatagatctaagtttttttctttgtgctttcatcatctaagtgt 7150414  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattc 556  Q
    |||||| |||||||||||||||| |||| ||||||||| |||||||| || ||||||||||||||| ||||    
T  7150413 ggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattc 7150343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 16981193 - 16981369
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||| ||||||||| ||||||||| || |||||| ||||||||||||||  |||||| |||||||||||||||| ||||||||||||||  |||| |    
T  16981193 aaatcactcctcttcatatttttctctctatttcaatctaaataagtgattta-cacatatatctaggttttttctttgtgatttcatcatctaagtgcg 16981291  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| |||||||||||||||| |||| | |||||| |||| |||| || ||||||||||| ||||||||||||||||    
T  16981292 gtggtttgttgttcgtcgtcttgtgcggcattgtttaattttccgtcttcttgcggtgttcctttgattcatattgaa 16981369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 400 - 564
Target Start/End: Complemental strand, 7613220 - 7613058
Alignment:
Q  400 tcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgtt 499  Q
    ||||| |||||||| |  |||||| |||||||||| ||||||| |||||||||||||||| |||| ||||||  ||||| ||||||||||||||||||||    
T  7613220 tcatccttttctctctgtttcaatctaaataagtg-tttttcatatagatctaggttttt-cttcatgattttgtcatctgagtgtggtggtgtgttgtt 7613123  T
Q  500 cgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||| ||| | ||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  7613122 cgtcgtcttgtgcaatgttgtttgatttctcgtcttgttgcggtgttcatttgattcatattgaa 7613058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 26578152 - 26578331
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttc---gtgatttcatcatccgagt 483  Q
    ||||||| | ||||||||||||||||| || |||||| ||||||||||||||| |||||||||||||||||||| |||   || |||||||||||  | |    
T  26578152 aaatcactcatcttcatctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggtttttttttctttgtaatttcatcatctaaat 26578250  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    || ||| | |||||||||||||||| ||||||||||||||||||||||| ||  ||| |||||||||||||||||||||||    
T  26578251 gtagtgatttgttgttcgtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgcagtgttcatttgattcatattgaa 26578331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 28235488 - 28235664
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||||||||||||||||||||| | || ||| || ||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||  ||||||    
T  28235488 aaatcacccctcttcatctttttctttctatttcgatctaaataagtgatttt-cacatagatctagattttttctttgtgatttcatcatctaagtgtg 28235586  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
     |||| ||||||  |||||||| |||| ||||||||||||| || | || ||||||||||||||| |||| |||||||    
T  28235587 atggtttgttgtctgtcgtcttgtgcggcgttgtttgattttccatcttcttgcggtgttcattttattcttattgaa 28235664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 397 - 564
Target Start/End: Complemental strand, 27576516 - 27576350
Alignment:
Q  397 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgtt 496  Q
    |||||||| |||||||| || |||||| |||||||||||| || ||||||||||||| ||||||||| |||||||| ||||  |||||||||||| ||||    
T  27576516 tcttcatccttttctctctatttcaatgtaaataagtgatatt-cacatagatctagattttttctttgtgatttcgtcatatgagtgtggtggtatgtt 27576418  T
Q  497 gttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||| ||  ||| ||||||||||||||||||||||| ||||||||||||||||||  || ||||||||    
T  27576417 gttcttctacttgtgcgacgttgtttgatttcccgtcttgttgcggtgttcatttattttatattgaa 27576350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 34881613 - 34881797
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttc---------gtgatttcatcat 477  Q
    |||||||| ||||||||||||| |||| || |||||| ||||||||||||||| ||||||||||||| |||||||||          |||||||||||||    
T  34881613 aaatcacctctcttcatctttt-ctctctatttcaatctaaataagtgatttt-cacatagatctagtttttttcttttttttctttgtgatttcatcat 34881710  T
Q  478 ccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |  ||||||||||| |||||||||||||||| |||| |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  34881711 ctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaa 34881797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 391 - 563
Target Start/End: Original strand, 7246865 - 7247037
Alignment:
Q  391 cacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgtggtg 489  Q
    ||||||||||||||||||||||| || |||||| ||||||||||| ||| |||||||||||||||||||| ||| ||||||||||||||  |||||||||    
T  7246865 cacccctcttcatctttttctctctatttcaatctaaataagtgacttt-cacatagatctaggtttttttctttgtgatttcatcatctaagtgtggtg 7246963  T
Q  490 gtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattga 563  Q
     | |||||||||||||||| |||| |||| |||  ||||| || || ||||||||||||||| |||| ||||||    
T  7246964 atttgttgttcgtcgtcttgtgcggcgttattttttttcctgtcttcttgcggtgttcattttattcctattga 7247037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 19281121 - 19280945
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||||| ||||||||||||||||| || |||||| ||||||||||| ||| |||| | |||||||||||||||| ||||||||||||||  ||||||    
T  19281121 aaatcacccatcttcatctttttctctctatttcaatctaaataagtgacttt-cacacatatctaggttttttctttgtgatttcatcatctaagtgtg 19281023  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| |||||||||||||||| |||  ||||||||| ||| || | || |||| |||||||||| |||| |||||||    
T  19281022 gtggtttgttgttcgtcgtcttgtgcagcgttgtttgcttttccatcttcttgcagtgttcattttattcctattgaa 19280945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 397 - 551
Target Start/End: Original strand, 11767720 - 11767876
Alignment:
Q  397 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttt-ttcttcgtgatttcatcatccgagtgtggtggtgtgt 495  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||| ||||| || ||||| ||||||||||| ||  |||| ||||||||||||||||    
T  11767720 tcttcatctttttctctatatttcaatctaaataagtgatttttcacgtagatatatgtttttttcttcgtgatgtcgccatctgagtgtggtggtgtgt 11767819  T
Q  496 tgttcgtcgtcttatgcgacgttgtttgatttcccgta-ttgttgcggtgttcattt 551  Q
    ||||||||||||| | ||| |||||||||||| ||||| || ||||||| |||||||    
T  11767820 tgttcgtcgtcttgtacgaagttgtttgattttccgtattttttgcggtattcattt 11767876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 403 - 564
Target Start/End: Complemental strand, 19259974 - 19259812
Alignment:
Q  403 tctttttctctataattcaatataaataagtgatttttcacatagatctagg--ttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttc 500  Q
    ||||||||||| || |||||| |||||||||||||||||||||||||||| |  ||||||||  ||||||||||||||  ||||||||||| ||||||||    
T  19259974 tctttttctctctatttcaatctaaataagtgatttttcacatagatctaagttttttttctctgtgatttcatcatctaagtgtggtggtttgttgttc 19259875  T
Q  501 gtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||| ||||  ||||||||| ||||||| ||  ||||||||| |||||||||||||||||    
T  19259874 gtcgtcttgtgcggtgttgtttga-ttcccgtcttcgtgcggtgtttatttgattcatattgaa 19259812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 391 - 563
Target Start/End: Original strand, 7241689 - 7241861
Alignment:
Q  391 cacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgtggtg 489  Q
    ||||||||||||||||||||||| || |||||| ||||||||||| ||| |||||||||||||||||||| ||| ||||||||||||||  | |||||||    
T  7241689 cacccctcttcatctttttctctctatttcaatctaaataagtgacttt-cacatagatctaggtttttttctttgtgatttcatcatctaattgtggtg 7241787  T
Q  490 gtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattga 563  Q
     | |||||||||||||||| |||| |||| |||  ||||| || || ||||||||||||||| |||| ||||||    
T  7241788 atttgttgttcgtcgtcttgtgcggcgttattttctttcctgtcttcttgcggtgttcattttattcctattga 7241861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 403 - 565
Target Start/End: Complemental strand, 20257855 - 20257694
Alignment:
Q  403 tctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgtggtggtgtgttgttcg 501  Q
    ||||||||||| || |||||| ||||||||||||||| |||||||||||||||||||| |||| | ||||   |||| ||||||||  | ||||||||||    
T  20257855 tctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggtttttttcttcattattttgccatctgagtgtggcagcgtgttgttcg 20257757  T
Q  502 tcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaag 565  Q
    ||||||| |||||| || || ||||| |||| ||||||||||||||||||||||||||||||||    
T  20257756 tcgtcttgtgcgacattatt-gattttccgtcttgttgcggtgttcatttgattcatattgaag 20257694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 387 - 561
Target Start/End: Complemental strand, 7887114 - 7886941
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    |||||| |||||||| |||||| |||| || || ||| ||||||||||||||| |||||| ||||| ||||||||||  |||||||||||||  ||||||    
T  7887114 aaatcatccctcttcgtcttttcctctctattttaatctaaataagtgatttt-cacataaatctatgttttttctttttgatttcatcatctaagtgtg 7887016  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    ||||| |||||||||||||||| | | || ||||||||||| |||| || ||||||||||  | |||||||||||    
T  7887015 gtggtttgttgttcgtcgtcttgtacaacattgtttgattttccgtcttcttgcggtgtttgtctgattcatatt 7886941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 3271584 - 3271402
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctag-------gttttttcttcgtgatttcatcatcc 479  Q
    ||||||| |||||||||||||| |||| |  |||||| ||||||||||||||| ||||||| ||||        |||||||||| ||||||||||||||     
T  3271584 aaatcactcctcttcatctttt-ctctctgtttcaatctaaataagtgatttt-cacataggtctaatttttttgttttttctttgtgatttcatcatct 3271487  T
Q  480 gagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
     ||||||||||| |||| ||||||||||| |||  ||||||||||||| |||| ||  |||||||||||||||||||||||||||    
T  3271486 aagtgtggtggtttgttattcgtcgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaa 3271402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 454 - 564
Target Start/End: Complemental strand, 41184550 - 41184440
Alignment:
Q  454 gttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttga 553  Q
    |||||||||| ||||||||||||||  ||||||||||| |||||||||||||||| |||| |||||||||||||||||| ||  || ||||||| |||||    
T  41184550 gttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgtggtgttcgtttga 41184451  T
Q  554 ttcatattgaa 564  Q
    |||||||||||    
T  41184450 ttcatattgaa 41184440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 399 - 564
Target Start/End: Original strand, 43148645 - 43148810
Alignment:
Q  399 ttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgtggtggtgtgttg 497  Q
    |||||| |||||||| || ||| || ||||||||||| ||| |||||| || ||| |||||| ||| ||||||||||||||  ||||||||||| |||||    
T  43148645 ttcatccttttctctctatttcgatctaaataagtgacttt-cacatatatttagatttttttctttgtgatttcatcatctaagtgtggtggtttgttg 43148743  T
Q  498 ttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||||| ||||  |||||||| |||||||| || ||||| ||||||||| |||| |||||||    
T  43148744 ttcgtcgtcttgtgcggtgttgtttgctttcccgtcttcttgcgttgttcattttattcctattgaa 43148810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 454 - 561
Target Start/End: Original strand, 42579857 - 42579964
Alignment:
Q  454 gttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttga 553  Q
    |||||||||| ||||||||||||||  ||||||||| | |||||||||||||||| |||||||||||||||||| | || ||  ||| |||||||||| |    
T  42579857 gttttttctttgtgatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcgacgttgtttgattttctgtcttcgtgcagtgttcatttta 42579956  T
Q  554 ttcatatt 561  Q
    ||||||||    
T  42579957 ttcatatt 42579964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 382 - 472
Target Start/End: Original strand, 6445834 - 6445923
Alignment:
Q  382 acttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttc 472  Q
    |||||||||||||| |||||||| |||||||| ||  | ||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  6445834 acttaaaatcacccatcttcatcgttttctctctatcttaatttaaataagtgattttt-acatagatctaggttttttcttcgtgatttc 6445923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 387 - 460
Target Start/End: Original strand, 10649356 - 10649428
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 460  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||    
T  10649356 aaatcacccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggtttttt 10649428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 495 - 561
Target Start/End: Complemental strand, 35921097 - 35921031
Alignment:
Q  495 ttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    ||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||| ||| ||||    
T  35921097 ttgttcgtcgtcttatgagacgttgtttgatttcgcgtcttgttgcggtgttcatttgtttcctatt 35921031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 457 - 556
Target Start/End: Original strand, 10649619 - 10649715
Alignment:
Q  457 ttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattc 556  Q
    ||||||| ||||||||||||||  ||||||||    |||||||||||||||| |||| ||||||||||||| |||| ||  |||||||||||||||||||    
T  10649619 ttttctttgtgatttcatcatctaagtgtggtt---tgttgttcgtcgtcttgtgcggcgttgtttgatttaccgtcttcgtgcggtgttcatttgattc 10649715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 386 - 567
Target Start/End: Original strand, 42432802 - 42432981
Alignment:
Q  386 aaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgt 485  Q
    ||||||||| ||||| || ||||||||| || |||||| |||| |||||| ||| || |||||| ||||||||||||| |||||||| |  || |||||     
T  42432802 aaaatcacctctctttatatttttctctctatttcaatctaaaaaagtgaattt-catatagatttaggttttttctttgtgatttctttgtctgagtgc 42432900  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagat 567  Q
    |||| ||| |||||||  | | | | || ||||||||||| | |||| ||||| | || |||||||||||| ||||||||||    
T  42432901 ggtgatgtattgttcggtg-cctgtacgtcgttgtttgatattccgtcttgttcctgtattcatttgattcttattgaagat 42432981  T

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Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 388 - 528
Target Start/End: Original strand, 14211105 - 14211243
Alignment:
Q  388 aatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtgg 487  Q
    |||||||||||| |||||||||| || |  |||||| ||||||||||||||| |||||| ||| || |||| | ||||||||||| || ||  |||| |     
T  14211105 aatcacccctctgcatctttttccctttctttcaatctaaataagtgatttt-cacatacatcaagtttttat-ttcgtgatttcgtcgtcttagtgcga 14211202  T
Q  488 tggtgtgttgttcgtcgtcttatgcgacgttgtttgatttc 528  Q
       |||||||||||||||||| |||| ||||||||||||||    
T  14211203 cattgtgttgttcgtcgtcttgtgcggcgttgtttgatttc 14211243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 387 - 552
Target Start/End: Complemental strand, 35631868 - 35631703
Alignment:
Q  387 aaatcacccctcttca--tctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtg 484  Q
    ||||||||| ||||||  |||||||| ||||| |||||| |||||||||||||||| ||||| ||||| ||||||||||| || |||  || ||||||||    
T  35631868 aaatcacccatcttcaactctttttc-ctatatttcaatctaaataagtgattttt-acatatatctaagttttttcttcatggttttgtcgtccgagtg 35631771  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttg 552  Q
        | ||| ||||||  |||||| |||||  ||||||||||||  || |||||||| ||||||||||    
T  35631770 catcgttgtattgttcaccgtcttgtgcgatattgtttgatttcatgtcttgttgcgatgttcatttg 35631703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 491 - 564
Target Start/End: Complemental strand, 10332653 - 10332580
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||| |||||||| |||| | |||||||||||| ||| ||||||| |||||  ||||||||||||||||    
T  10332653 tgtgttgtttgtcgtcttgtgcggcattgtttgatttcgcgtcttgttgcagtgtttgtttgattcatattgaa 10332580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 457 - 558
Target Start/End: Complemental strand, 19983462 - 19983361
Alignment:
Q  457 ttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattc 556  Q
    ||||||| |||||||| ||||  |||||||| | |||||||||||||| ||| |||| ||||||| | |||  ||| |||||| |||||||||||| |||    
T  19983462 ttttctttgtgatttcgtcatatgagtgtggcgctgtgttgttcgtcgccttgtgcggcgttgttagttttttcgtcttgttgtggtgttcatttgcttc 19983363  T
Q  557 at 558  Q
    ||    
T  19983362 at 19983361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 491 - 567
Target Start/End: Original strand, 19120896 - 19120972
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagat 567  Q
    ||||||||||||||||||||| | | |||||||||||| ||| |||||||||||||  |||| ||| | ||||||||    
T  19120896 tgtgttgttcgtcgtcttatgaggcattgtttgatttcgcgtcttgttgcggtgtttgtttgtttccttttgaagat 19120972  T

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Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 527
Target Start/End: Complemental strand, 1582288 - 1582160
Alignment:
Q  397 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgtt 496  Q
    ||||||| |||||||||  | || ||| ||||||||||||||| ||| ||||||||| ||||| || |||||||||||| |  ||||| |  | |||||     
T  1582288 tcttcatatttttctctccattttaatctaaataagtgatttt-cacgtagatctagcttttt-ctacgtgatttcatcgtatgagtgcgacgttgtgtc 1582191  T
Q  497 gttcgtcgtcttatgcgacgttgtttgattt 527  Q
    ||| |||||||| |||| |||||||||||||    
T  1582190 gtttgtcgtcttgtgcggcgttgtttgattt 1582160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 527
Target Start/End: Original strand, 1602527 - 1602655
Alignment:
Q  397 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgtt 496  Q
    ||||||| |||||||||  | || ||| ||||||||||||||| ||| ||||||||| ||||| || |||||||||||| |  ||||| |  | |||||     
T  1602527 tcttcatatttttctctccattttaatctaaataagtgatttt-cacgtagatctagcttttt-ctacgtgatttcatcgtatgagtgcgacgttgtgtc 1602624  T
Q  497 gttcgtcgtcttatgcgacgttgtttgattt 527  Q
    ||| |||||||| |||| |||||||||||||    
T  1602625 gtttgtcgtcttgtgcggcgttgtttgattt 1602655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 498 - 564
Target Start/End: Original strand, 4954005 - 4954071
Alignment:
Q  498 ttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||||| |||| ||||||||  |||||||| || ||||||||||||||| |||| |||||||    
T  4954005 ttcgtcgtcttgtgcggcgttgttttctttcccgtcttcttgcggtgttcattttattcctattgaa 4954071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 523 - 564
Target Start/End: Complemental strand, 22978964 - 22978923
Alignment:
Q  523 gatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| |||| |||||||||||||||||||||||||||||||    
T  22978964 gattttccgttttgttgcggtgttcatttgattcatattgaa 22978923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 486 - 551
Target Start/End: Complemental strand, 31802549 - 31802484
Alignment:
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcattt 551  Q
    |||| |||||||||||  ||||| |||| ||||||||||||||| ||  |||||||||||||||||    
T  31802549 ggtgttgtgttgttcgctgtcttgtgcggcgttgtttgatttccggtcatgttgcggtgttcattt 31802484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 501
Target Start/End: Complemental strand, 42432254 - 42432143
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    |||||||| |||||||| ||||||||| |  ||||||  ||| ||||||||| |   |||||||||||||||||||| || |||||||| |  ||||| |    
T  42432254 aaatcacctctcttcatatttttctctctttttcaattaaaaaaagtgatttat---atagatctaggttttttctttgtaatttcatcgtttgagtgcg 42432158  T
Q  487 gtggtgtgttgttcg 501  Q
    ||| ||| |||||||    
T  42432157 gtgctgtattgttcg 42432143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 564
Target Start/End: Original strand, 19349666 - 19349753
Alignment:
Q  477 tccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||| |  |||||||||||||||||| |||| |||| ||||||||| ||| | |||||  ||||| |||| ||| |||||||    
T  19349666 tccgagtgtgatattgtgttgttcgtcgtcttgtgcggcgttatttgatttcacgtctagttgcaatgttcgtttggttcctattgaa 19349753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 528
Target Start/End: Complemental strand, 28541044 - 28540978
Alignment:
Q  462 ttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttc 528  Q
    |||||||||||||| ||  |||| |  | |||||||||||||||||| |||| ||||||||||||||    
T  28541044 ttcgtgatttcatcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttc 28540978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 495 - 564
Target Start/End: Original strand, 38711683 - 38711750
Alignment:
Q  495 ttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||| |||||||| ||| |||||||||||||  | |||||||| ||||| |||| |||||||||||    
T  38711683 ttgttcgttgtcttatgtgacattgtttgatttcc--tcttgttgcgatgttcttttggttcatattgaa 38711750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 498 - 563
Target Start/End: Complemental strand, 8985049 - 8984984
Alignment:
Q  498 ttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattga 563  Q
    ||||||||||| || ||| |||||||||| | ||| |||||||| ||||| |||| ||||||||||    
T  8985049 ttcgtcgtcttgtgtgacattgtttgattccgcgtcttgttgcgctgttcgtttgtttcatattga 8984984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 564
Target Start/End: Complemental strand, 19100710 - 19100637
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||| ||||| ||||| |||||||||||| | ||||  || ||| | ||||||||||||||||| |||||||    
T  19100710 tgtgttattcgttgtcttgtgcgacgttgttcggtttcttgtcttggtacggtgttcatttgattcctattgaa 19100637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 126; Significance: 1e-64; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 39987294 - 39987470
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    |||||||| |||||||||||||||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||    
T  39987294 aaatcacctctcttcatctttttctctctgattcaatctaaataagtgatttttcatatagatctag-ttttttcttcgtgatttcaccatccgagtgtg 39987392  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||| |||||||||||||| |||| ||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  39987393 gtggtgtattgttcgtcgtcttgtgcggcgttgtttgattttccgtattgctgcggtgttcatttgattcatattgaa 39987470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 385 - 564
Target Start/End: Original strand, 51871766 - 51871944
Alignment:
Q  385 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtg 484  Q
    ||||||||||||||||||||||||||||| || |||||| ||||||||||| ||| ||||||||||||| ||||||||| ||||||||||||||  ||||    
T  51871766 taaaatcacccctcttcatctttttctctctatttcaatctaaataagtgacttt-cacatagatctagcttttttctttgtgatttcatcatctaagtg 51871864  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||| |||||||||||||||| |||||||||||||| ||| |||| || ||||||||||||||| |||| |||||||    
T  51871865 tggtggtttgttgttcgtcgtcttgtgcgacgttgtttgcttttccgtcttcttgcggtgttcattttattcttattgaa 51871944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 387 - 567
Target Start/End: Original strand, 14545424 - 14545602
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||| | |||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||  ||||||    
T  14545424 aaatcactcatcttcatctttttctctatatttcaatctaaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtg 14545522  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagat 567  Q
    ||||| |||||||||||||||| ||||||| ||||||| ||||||| || ||||||||||||| ||||| || ||||||||    
T  14545523 gtggtttgttgttcgtcgtcttgtgcgacgctgtttga-ttcccgtcttcttgcggtgttcatctgatttattttgaagat 14545602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 5701161 - 5701340
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttc---gtgatttcatcatccgagt 483  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||||||| |||||||||||||||||||| |||   || |||||||||||  |||    
T  5701161 aaatcacccctcttcatctttttctctttatttcaatttaaataagtgatttt-cacatagatctaggtttttttttctttgtaatttcatcatctaagt 5701259  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||| | |||||||||||||||| |||| |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  5701260 gtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaa 5701340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 28035043 - 28035220
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgt 485  Q
    ||||||| | ||||||||||||||||| || |||||| ||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||  |||||    
T  28035043 aaatcactcatcttcatctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggtttttttctttgtgatttcatcatctaagtgt 28035141  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||| |||||||||||||||| |||| |||||||||||||||||| ||  | |||||||||||||||||||||||||    
T  28035142 ggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtacggtgttcatttgattcatattgaa 28035220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 7997691 - 7997870
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttc---gtgatttcatcatccgagt 483  Q
    ||||||||| ||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||| |||   || |||||||||||  |||    
T  7997691 aaatcacccttcttcatctttttctctttatttcaatataaataagtgatttt-cacatagatctaggtttttttttctttgtaatttcatcatctaagt 7997789  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||| | |||||||||||||||| |||| |||||||||||||||||| ||  ||| |||||||||||||||||||||||    
T  7997790 gtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcagtgttcatttgattcatattgaa 7997870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 18569487 - 18569310
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttt-ttcttcgtgatttcatcatccgagtgt 485  Q
    ||||||||  ||||||||||||||||| || |||||| ||||||||||||||| |||||||||||||||||| |||||||||||||| ||||  ||||||    
T  18569487 aaatcacctgtcttcatctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttcttcttcgtgatttcgtcatttgagtgt 18569389  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||||||||| |||| | ||  |||||| |||||||||| |||||||||||||||||| ||||||||||||    
T  18569388 ggtggtgtgttgttcgtcatcttgtccggtgttgttagatttcccgtcttgttgcggtgttcatttaattcatattgaa 18569310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 51868822 - 51868645
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgt 485  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||| ||| |||||||||||||||||||| ||| ||||||||||||||  |||||    
T  51868822 aaatcacccctcttcatctttttctctctatttcaatctaaataagtgacttt-cacatagatctaggtttttttctttgtgatttcatcatctaagtgt 51868724  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||| |||||||||||||||| |||| ||||||||| |||| ||| || ||||||||||||||| |||| |||||||    
T  51868723 ggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttctcgtcttcttgcggtgttcattttattcttattgaa 51868645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 387 - 565
Target Start/End: Original strand, 27872643 - 27872820
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||||| |||||||||||||| || || |||||| ||||||||||||||| |||||||||||| ||||||||||||||||| |||||||  ||||||    
T  27872643 aaatcacccatcttcatctttttcgctctatttcaatctaaataagtgatttt-cacatagatctaagttttttcttcgtgattgcatcatctaagtgtg 27872741  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaag 565  Q
    ||||| |||||||||||||||| | ||||||||||||||||   || || ||||||||||||||| ||||| |||||||    
T  27872742 gtggtttgttgttcgtcgtcttgttcgacgttgtttgattttttgtcttcttgcggtgttcatttaattcaaattgaag 27872820  T

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Target: chr1; HSP #10
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 389 - 564
Target Start/End: Original strand, 9919295 - 9919470
Alignment:
Q  389 atcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgtgg 487  Q
    ||||||||||||||||||||||||| || |||||| |||||||||||||||| ||||||||||| ||||||| ||| ||||||||| ||||  |||||||    
T  9919295 atcacccctcttcatctttttctctctatttcaatctaaataagtgattttt-acatagatctatgtttttttctttgtgatttcaccatctaagtgtgg 9919393  T
Q  488 tggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||| |||||||||||||||| | || ||||||||| |||||||| || ||||||||||||||| |||| |||||||    
T  9919394 tggtttgttgttcgtcgtcttgtacggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaa 9919470  T

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Target: chr1; HSP #11
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 404 - 564
Target Start/End: Original strand, 34519054 - 34519213
Alignment:
Q  404 ctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtc 503  Q
    |||||||||| || |||||| ||||||||||||||| |||||||||||||||||||||||  |||||||||||||  ||||||||||| |||||||||||    
T  34519054 ctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttctttttgatttcatcatctaagtgtggtggtttgttgttcgtc 34519152  T
Q  504 gtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    || || |||| |||||||||||||| ||| || ||| ||||||||||||||||||||||||    
T  34519153 gttttgtgcggcgttgtttgatttctcgtcttcttgtggtgttcatttgattcatattgaa 34519213  T

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Target: chr1; HSP #12
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 38520710 - 38520531
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||| | ||||||||||||||||| || ||| || ||||||||||||||| |||||||||||| |||||||||||||||||||||||||  || |||    
T  38520710 aaatcactcatcttcatctttttctctctatttcgatctaaataagtgatttt-cacatagatctatgttttttcttcgtgatttcatcatctaagagtg 38520612  T
Q  487 gtggtgtgttgttcgt---cgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| ||||||||||   |||||| || | ||||||||||||||||||||| || |||||||||| ||||||||||||||    
T  38520611 gtggtttgttgttcgtcgtcgtcttgtgtggcgttgtttgatttcccgtattcttacggtgttcatctgattcatattgaa 38520531  T

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Target: chr1; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 388 - 564
Target Start/End: Complemental strand, 5324733 - 5324558
Alignment:
Q  388 aatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtgg 487  Q
    ||||||| |||||||||||||||||| || |||||| ||||||||||||||| ||| || || || |||||| ||| ||||||||||||||  |||||||    
T  5324733 aatcacctctcttcatctttttctctctatttcaatctaaataagtgatttt-cacgtaaatttaagtttttcctttgtgatttcatcatctaagtgtgg 5324635  T
Q  488 tggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||| ||||||||| |||||| ||||   |||||||||||||||| || ||||||||||||||||||||||||||||    
T  5324634 tggtttgttgttcgccgtcttgtgcggtattgtttgatttcccgtctttttgcggtgttcatttgattcatattgaa 5324558  T

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Target: chr1; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 437 - 564
Target Start/End: Complemental strand, 39927682 - 39927554
Alignment:
Q  437 ttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtatt 535  Q
    |||||| |||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||| || | |||||||||||||||||| ||    
T  39927682 ttttcagatagatctagatttttttcttcgtgatttcgtcatccgagtgtggtggtgtgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtctt 39927583  T
Q  536 gttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||||||||||| |||||||||||    
T  39927582 gttgcggtgttcatttgtttcatattgaa 39927554  T

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Target: chr1; HSP #15
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 385 - 564
Target Start/End: Original strand, 44637323 - 44637502
Alignment:
Q  385 taaaatcacccctcttcatctttttc-tctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagt 483  Q
    |||||||||| ||||||||||||||  ||| || |||||| ||||||||||||||| ||| |||||||| |||| ||||| |||||||| |||||  | |    
T  44637323 taaaatcacctctcttcatcttttttatctttatttcaatctaaataagtgatttt-cacgtagatctaagtttcttctttgtgatttcgtcatctaaat 44637421  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||| |||||||||||| ||||| |||||||||||||| |||||||| ||||| |||||||||||||||||||||||||    
T  44637422 gtggtgatgtgttgttcgtagtcttgtgcgacgttgtttggtttcccgtcttgttacggtgttcatttgattcatattgaa 44637502  T

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Target: chr1; HSP #16
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 396 - 564
Target Start/End: Original strand, 11453847 - 11454016
Alignment:
Q  396 ctcttcatctttttctctat--aattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgt 493  Q
    |||||||||||||||||| |  | |||||| |||||||||| |||| ||||||||||||||||||||||| ||||||||||||||  ||||||||||| |    
T  11453847 ctcttcatctttttctctctctatttcaatctaaataagtggtttt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggttt 11453945  T
Q  494 gttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||||||||| |||  || ||||||||||||||| || ||||||| |||||||||||||| |||||    
T  11453946 gttgttcgtcgtcttgtgcagcgctgtttgatttcccgtctttttgcggtattcatttgattcatcttgaa 11454016  T

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Target: chr1; HSP #17
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 385 - 561
Target Start/End: Complemental strand, 40881192 - 40881015
Alignment:
Q  385 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtga--tttcatcatccgag 482  Q
    ||||||||| | ||||||||||||||||| || |||||| ||||| ||||||||| ||| |||||||||||||||| ||  |||  ||||||||||  ||    
T  40881192 taaaatcactcatcttcatctttttctctctatttcaatctaaatgagtgatttt-cacttagatctaggttttttttttttgagatttcatcatctaag 40881094  T
Q  483 tgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    ||||||||| |||||||||||||||| |||| |||||||||||||||||| ||  ||||||||||||||||||||||||    
T  40881093 tgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatatt 40881015  T

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Target: chr1; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 25406461 - 25406284
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgt 485  Q
    ||||||| ||||||||||||||||||| || |||||| ||||||||||| ||| |||||||||||||||||||| ||| |||||||| |||||  |||||    
T  25406461 aaatcacacctcttcatctttttctctctatttcaatctaaataagtgacttt-cacatagatctaggtttttttctttgtgatttcgtcatctaagtgt 25406363  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||| | |||||||||||||| || | ||||||||| |||||||| || ||||||||||||||| |||| |||||||    
T  25406362 ggtggtttattgttcgtcgtcttgtgtggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaa 25406284  T

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Target: chr1; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 50272317 - 50272140
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgt 485  Q
    ||||||||||| ||||||||||||||| || |||||| ||||||||| ||||| |||||||||||| ||||||| ||| ||||||||||| ||  ||| |    
T  50272317 aaatcacccctattcatctttttctctttatttcaatctaaataagtaatttt-cacatagatctaagtttttttctttgtgatttcatcttctaagttt 50272219  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||| | ||||||||||||| || |||| |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  50272218 ggtgatttgttgttcgtcgttttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaa 50272140  T

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Target: chr1; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 393 - 561
Target Start/End: Original strand, 3871319 - 3871485
Alignment:
Q  393 cccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtg 492  Q
    ||||| ||||||||| |||||  | |||||| ||||||||||||||| |||||||||||| |||||||||| ||||||||||||||  |||||||||||     
T  3871319 ccccttttcatctttctctctcaatttcaatctaaataagtgatttt-cacatagatctaagttttttctttgtgatttcatcatctaagtgtggtggtt 3871417  T
Q  493 tgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    |||||||||||||||| |||  |||||||||||||||||| || ||||||||||| ||||||| |||||    
T  3871418 tgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcttgcggtgttc-tttgatttatatt 3871485  T

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Target: chr1; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 33291596 - 33291418
Alignment:
Q  387 aaatcacccctcttcatcttttt-ctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtg 484  Q
    ||||||||||||||||| ||||| || | || |||||||||||||||||||||| |||||| ||||| ||||||| ||| ||||||||||||||  ||||    
T  33291596 aaatcacccctcttcattttttttctttctatttcaatataaataagtgatttt-cacataaatctatgtttttttctttgtgatttcatcatctaagtg 33291498  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||| |||||||||||||||| ||||  |||||||||||| ||||  |  |||||||||||||||||||||||||||    
T  33291497 tggtggtttgttgttcgtcgtcttgtgcggtgttgtttgattttccgtcgtcgtgcggtgttcatttgattcatattgaa 33291418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 9172392 - 9172571
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtg--atttcatcatccgagt 483  Q
    ||||||||||||||||| ||||| ||| || |||||| ||||||||||| ||| |||||||||||||||||||| ||| |||  |||| ||||||  |||    
T  9172392 aaatcacccctcttcatatttttttctctatttcaatctaaataagtgacttt-cacatagatctaggtttttttctttgtgtgattttatcatctaagt 9172490  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||| |||||||||||||||| |||| ||||||||| |||||||| || ||||||||||||||| |||| |||||||    
T  9172491 gtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaa 9172571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 9180374 - 9180553
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtg--atttcatcatccgagt 483  Q
    ||||||||||||||||| ||||| ||| || |||||| ||||||||||| ||| |||||||||||||||||||| ||| |||  |||| ||||||  |||    
T  9180374 aaatcacccctcttcatatttttttctctatttcaatctaaataagtgacttt-cacatagatctaggtttttttctttgtgtgattttatcatctaagt 9180472  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||| |||||||||||||||| |||| ||||||||| |||||||| || ||||||||||||||| |||| |||||||    
T  9180473 gtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaa 9180553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 385 - 564
Target Start/End: Original strand, 20266204 - 20266383
Alignment:
Q  385 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctag-gttttttcttcgtgatttcatcatccgagt 483  Q
    ||||||||||| ||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||  ||||||||| || |||||||||||  |||    
T  20266204 taaaatcacccatcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctagctttttttctttgtaatttcatcatctaagt 20266302  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||| | |||||||||||||||| || |   |||||||||||||||| ||  |||||||  ||||||||||||||||||    
T  20266303 gtggtgatttgttgttcgtcgtcttgtgtggaattgtttgatttcccgtcttcgtgcggtggacatttgattcatattgaa 20266383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 35584798 - 35584618
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt----cttcgtgatttcatcatccgag 482  Q
    ||||||| | ||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||||||||||    ||| || |||| || |||  ||    
T  35584798 aaatcactcatcttcatctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggttttttttttctttgtaattttataatctaag 35584700  T
Q  483 tgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||| | |||||||||||||||| |||| ||||||||||||| |||| ||  |||||||||||||||||||||||||||    
T  35584699 tgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaa 35584618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 446 - 565
Target Start/End: Complemental strand, 48365883 - 48365764
Alignment:
Q  446 agatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgt 545  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||| ||| ||||||||||||||   || |||| |||||||    
T  48365883 agatctaggttttttcttcgtgatttcgtcatctgagtgtggtggtgtgttgttcgtcatcttgtgcaacgttgtttgattttttgtcttgtagcggtgt 48365784  T
Q  546 tcatttgattcatattgaag 565  Q
    ||||||||||||||||||||    
T  48365783 tcatttgattcatattgaag 48365764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 7342626 - 7342803
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgt 485  Q
    ||||||||||||||||| ||||| | | || |||||| ||||||||||| |||| || |||||||| ||||||| ||| ||||||||||||||  |||||    
T  7342626 aaatcacccctcttcatatttttttatctatttcaatctaaataagtgactttt-acgtagatctatgtttttttctttgtgatttcatcatctaagtgt 7342724  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||| |||||||||||||||| |||| ||||||||| |||||||| || ||||| ||||||||| |||| |||||||    
T  7342725 ggtggtttgttgttcgtcgtcttgtgcggcgttgtttgttttcccgtcttcttgcgttgttcattttattcctattgaa 7342803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 394 - 564
Target Start/End: Complemental strand, 19716067 - 19715895
Alignment:
Q  394 ccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttc----gtgatttcatcatccgagtgtggtg 489  Q
    |||||||||||||||||||| || |||||| ||||||||||||||| ||||||||| |||||||||| ||     || |||||||||||  |||||||||    
T  19716067 ccctcttcatctttttctctttatttcaatctaaataagtgatttt-cacatagatttaggttttttttttcattgtaatttcatcatctaagtgtggtg 19715969  T
Q  490 gtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
     | |||||||||||||||| |||  |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  19715968 at-tgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaa 19715895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 396 - 564
Target Start/End: Complemental strand, 7312266 - 7312105
Alignment:
Q  396 ctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgt 495  Q
    |||||||||||||||||| || |||||  ||||||| ||||||| ||| |||||||||||||||||||||||||||| | |||  |||||||||||||||    
T  7312266 ctcttcatctttttctctctatttcaaattaaataaatgatttt-cacgtagatctaggttttttcttcgtgatttcgt-atctaagtgtggtggtgtgt 7312169  T
Q  496 tgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| | ||||| |     |||||||||||| |||| |||||||||||||||||||||||||||||||    
T  7312168 tgttcattgtcttgt-----gttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaa 7312105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 396 - 564
Target Start/End: Original strand, 30878988 - 30879156
Alignment:
Q  396 ctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgagtgtggtggtgt 493  Q
    |||||||||||||||||| || || ||| ||||||||||||||| |||||||||||| |||||||  ||| || ||||||||||   ||||||||| | |    
T  30878988 ctcttcatctttttctctttattttaatctaaataagtgatttt-cacatagatctatgttttttttctttgtaatttcatcatttaagtgtggtgattt 30879086  T
Q  494 gttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||||||||| |||| ||||||||||||| |||| ||  |||||||||||||||||||||||||||    
T  30879087 gttgttcgtcgtcttgtgcg-cgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaa 30879156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 399 - 560
Target Start/End: Complemental strand, 45426227 - 45426070
Alignment:
Q  399 ttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgt 498  Q
    ||||||||||||||| || || ||| ||||||||||||||| |||||||||||| |||||||    ||||||||||||||  ||||||||||| ||||||    
T  45426227 ttcatctttttctctctatttaaatctaaataagtgatttt-cacatagatctaagttttttt---gtgatttcatcatctaagtgtggtggtttgttgt 45426132  T
Q  499 tcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatat 560  Q
    |||||||||| |||| |||||||||||||||| |  |  |||||||||||||||||||||||    
T  45426131 tcgtcgtcttgtgcggcgttgtttgatttcccatcatcgtgcggtgttcatttgattcatat 45426070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 387 - 556
Target Start/End: Complemental strand, 30818522 - 30818359
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||||| ||||||||||||||||| || |||||| ||||||||||||||| |||||| |||||| |||||| || ||||||||||||||  ||||||    
T  30818522 aaatcacccatcttcatctttttctctctatttcaatctaaataagtgatttt-cacataaatctagtttttttttttgtgatttcatcatctaagtgtg 30818424  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgt-attgttgcggtgttcatttgattc 556  Q
    ||||| |||||||||||||||| |     |||||||||| |||||| |||| |||||||||||||||||||    
T  30818423 gtggtttgttgttcgtcgtcttgt-----gttgtttgatctcccgtcattg-tgcggtgttcatttgattc 30818359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 425 - 564
Target Start/End: Original strand, 31836748 - 31836888
Alignment:
Q  425 taaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgttt 522  Q
    ||||||||||||||| ||||||||||||||||||||  ||| || |||||||||||  ||||||||| | |||||||||||||||| ||||  |||||||    
T  31836748 taaataagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtcgtcttgtgcggtgttgttt 31836846  T
Q  523 gatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||| ||  |||||||||||||||||||||||||||    
T  31836847 gatttcccgtcttcgtgcggtgttcatttgattcatattgaa 31836888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 381 - 532
Target Start/End: Original strand, 19723231 - 19723382
Alignment:
Q  381 gacttaaaatcacccctcttcatcttttt-ctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatc 478  Q
    ||||| |||||||| |||||||| ||||| |||| || |||||| ||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||    
T  19723231 gacttgaaatcacctctcttcatattttttctctcta-ttcaatctaaataagtgatttt-cacatagatctaggtttttttctttgtgatttcatcatc 19723328  T
Q  479 cgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgt 532  Q
      ||||||||||| |||||||||||||||| |||| ||||||||||||| ||||    
T  19723329 taagtgtggtggtttgttgttcgtcgtcttctgcggcgttgtttgattttccgt 19723382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 393 - 564
Target Start/End: Complemental strand, 50166270 - 50166099
Alignment:
Q  393 cccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgtggtggt 491  Q
    |||||||| |||||||||| | || |||||| ||||||||||| ||| ||||||||| |||||||||| ||  ||||||||||||||  |||||||||||    
T  50166270 cccctctttatctttttctatctatttcaatctaaataagtgaattt-cacatagatttaggtttttttctatgtgatttcatcatctaagtgtggtggt 50166172  T
Q  492 gtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
     |||||||||||||||| |||| |||| |||| |||| ||| || ||||||||||||||| |||| |||||||    
T  50166171 ttgttgttcgtcgtcttgtgcggcgttatttgctttctcgtcttcttgcggtgttcattttattcctattgaa 50166099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 418 - 564
Target Start/End: Complemental strand, 41081849 - 41081704
Alignment:
Q  418 ttcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgt 517  Q
    |||||| || |||||||||||  | ||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||| ||| ||| |||| |||    
T  41081849 ttcaatctatataagtgatttg-cgcatagatctaggttttttcatcgtgacttcgtcatccgagtgtggtggtgtgttgttcatcggcttgtgcggcgt 41081751  T
Q  518 tgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| |||||  |  ||||||| |||||||| ||||||||||||||    
T  41081750 tgtttaatttcatgccttgttgcagtgttcatatgattcatattgaa 41081704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 459 - 564
Target Start/End: Complemental strand, 9687309 - 9687204
Alignment:
Q  459 ttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcat 558  Q
    ||||| ||||||||||||||  ||||||||||| ||||||||||| |||| |||| |||||||||||||||| | || ||||||||||||||||||||||    
T  9687309 ttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcatcttgtgcggcgttgtttgatttcccatcttcttgcggtgttcatttgattcat 9687210  T
Q  559 attgaa 564  Q
    ||||||    
T  9687209 attgaa 9687204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 50148276 - 50148451
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttc---gtgatttcatcatccgagt 483  Q
    |||||| || |||||||| |||||||| || || ||| ||||||||||||||| |||||||||||||||||||| |||   || |||||||| ||  |||    
T  50148276 aaatcatccatcttcatccttttctctttattttaatctaaataagtgatttt-cacatagatctaggtttttttttctttgtaatttcatcttctaagt 50148374  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||| | ||||||    |||||| |||||| |||||||||||||||| ||  |||||||||||||||||||||||||||    
T  50148375 gtggtgatttgttgt----cgtcttgtgcgacattgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaa 50148451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 387 - 460
Target Start/End: Complemental strand, 25728136 - 25728064
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 460  Q
    ||||||| ||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||    
T  25728136 aaatcactcctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggtttttt 25728064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 462 - 564
Target Start/End: Original strand, 47132861 - 47132963
Alignment:
Q  462 ttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    ||||||||||| || || ||||| || | ||||||||||||||| || |||| |||||||| ||||| ||| |||||||||||||| |||| ||||||||    
T  47132861 ttcgtgatttcgtcgtctgagtggggcgttgtgttgttcgtcgttttgtgcggcgttgtttaatttcgcgtcttgttgcggtgttcgtttgcttcatatt 47132960  T
Q  562 gaa 564  Q
    |||    
T  47132961 gaa 47132963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 481 - 564
Target Start/End: Complemental strand, 33817263 - 33817181
Alignment:
Q  481 agtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||||| | ||||| ||||||||||||  |||||||||||||| ||| || || |||||||||||||||||||||||||    
T  33817263 agtgtggtggtttattgtttgtcgtcttatgctgcgttgtttgatttctcgtctt-tttcggtgttcatttgattcatattgaa 33817181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 481 - 564
Target Start/End: Complemental strand, 33876733 - 33876651
Alignment:
Q  481 agtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||||| | ||||| ||||||||||||  |||||||||||||| ||| || || |||||||||||||||||||||||||    
T  33876733 agtgtggtggtttattgtttgtcgtcttatgctgcgttgtttgatttctcgtctt-tttcggtgttcatttgattcatattgaa 33876651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 491 - 564
Target Start/End: Original strand, 12635157 - 12635230
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||||||||| |||| |||||||||||||  ||| |||| | |||||||||||| |||||||||||    
T  12635157 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttacgttttgtagtggtgttcatttggttcatattgaa 12635230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 385 - 478
Target Start/End: Original strand, 40646590 - 40646684
Alignment:
Q  385 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg--ttttttcttcgtgatttcatcatc 478  Q
    ||||||||| | ||||||||||||||| | || |||||| ||||||||||| ||||||| ||||||||||  ||||||||| || |||||||||||    
T  40646590 taaaatcactcatcttcatctttttctatttatttcaatctaaataagtga-ttttcacgtagatctaggttttttttctttgtaatttcatcatc 40646684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 484
Target Start/End: Complemental strand, 30558832 - 30558736
Alignment:
Q  386 aaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtg 484  Q
    ||||| || ||||||||| ||||||| | || |||||| |||| |||||||||  |||| ||||||||||||||||||  ||||||||||||| |||||    
T  30558832 aaaataactcctcttcatatttttctttctatttcaatctaaaaaagtgattt--cacacagatctaggttttttctttatgatttcatcatctgagtg 30558736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 427 - 564
Target Start/End: Original strand, 4396914 - 4397051
Alignment:
Q  427 aataagtgatttttcacatagatctaggttt-tttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgat 525  Q
    ||||||||||||| || ||| |||||||||| |||||| |||||||| || |  ||||| |  | ||||||||| ||||||||||| ||  |||||||||    
T  4396914 aataagtgatttt-catataaatctaggtttatttctttgtgatttcgtcgtttgagtgcgacgatgtgttgtttgtcgtcttatgtgatattgtttgat 4397012  T
Q  526 ttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||| |||  ||||||| ||||| |||||||| |||||||    
T  4397013 ttctcgtcatgttgcgatgttcctttgattcttattgaa 4397051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 480 - 564
Target Start/End: Original strand, 16262837 - 16262921
Alignment:
Q  480 gagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||| | || |||||| || || || |||| |||||||||||||| ||| |||||| ||||||| ||||||||||||||||    
T  16262837 gagtgtggcgatgcgttgttggttgttttgtgcggcgttgtttgatttcgcgtcttgttgtggtgttcgtttgattcatattgaa 16262921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 491 - 551
Target Start/End: Complemental strand, 29837697 - 29837637
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcattt 551  Q
    |||||||||||  ||||| ||||||||||||||||||||||| |||||||||  |||||||    
T  29837697 tgtgttgttcgatgtcttgtgcgacgttgtttgatttcccgtcttgttgcggcattcattt 29837637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 515 - 564
Target Start/End: Original strand, 40646702 - 40646751
Alignment:
Q  515 cgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||||||||| ||  ||||||||| |||||||||||||||||    
T  40646702 cgttgtttgatttcccgtcttcgtgcggtgtttatttgattcatattgaa 40646751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 491 - 528
Target Start/End: Original strand, 48750168 - 48750205
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttc 528  Q
    |||||||||||||||||| |||||||||||||||||||    
T  48750168 tgtgttgttcgtcgtcttgtgcgacgttgtttgatttc 48750205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 491 - 564
Target Start/End: Original strand, 49626901 - 49626973
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||||||||| |||| |||||||||||||  | | ||||||||||||||  ||| |||||||||||    
T  49626901 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttgacatcttgttgcggtgttc-gttggttcatattgaa 49626973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 528
Target Start/End: Complemental strand, 32679235 - 32679163
Alignment:
Q  456 tttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttc 528  Q
    ||||| |||||||||||||| || ||||| || | ||||||||||||| |||| |||| ||| ||||||||||    
T  32679235 ttttttttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgtcatcttgtgcggcgtagtttgatttc 32679163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 498 - 564
Target Start/End: Original strand, 1602084 - 1602150
Alignment:
Q  498 ttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||||| ||||||||||||||||||  | | ||||||||| |||| |||||||  |||||||    
T  1602084 ttcgtcgtcttctgcgacgttgtttgattttgcatcttgttgcggcgttcgtttgatttctattgaa 1602150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 464 - 561
Target Start/End: Original strand, 9341687 - 9341784
Alignment:
Q  464 cgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    ||||||||| || || |||||  ||| | |||||||||||||||| |||  ||||||||||||    || |||||||||||||  |||||||||||||    
T  9341687 cgtgatttcgtcgtctgagtggagtgttatgttgttcgtcgtcttgtgcagcgttgtttgattctgtgtcttgttgcggtgtttgtttgattcatatt 9341784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 528
Target Start/End: Original strand, 16161821 - 16161858
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttc 528  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  16161821 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttc 16161858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 528
Target Start/End: Complemental strand, 34413199 - 34413162
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttc 528  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  34413199 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttc 34413162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 564
Target Start/End: Original strand, 44543260 - 44543332
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||||||||| ||||||| |||||||||||||  | | || |||||||||||  ||| |||||||||||    
T  44543260 tgtgttgttcgtcgtattatgcggcgttgtttgatttggcatcttattgcggtgttc-gttggttcatattgaa 44543332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 438 - 518
Target Start/End: Complemental strand, 7836951 - 7836871
Alignment:
Q  438 tttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgtt 518  Q
    ||||||||| ||| || |||||  || ||||||||||| ||  |||| || | |||||||||||||||||| |||||||||    
T  7836951 tttcacatatatcaagttttttcttttgtgatttcatcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgacgtt 7836871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 456 - 528
Target Start/End: Original strand, 39724934 - 39725006
Alignment:
Q  456 tttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttc 528  Q
    ||||| ||||||||||| || || |||||||| | ||| ||||||  ||||||| ||||| ||||||||||||    
T  39724934 tttttattcgtgatttcgtcgtctgagtgtggcgatgttttgttcaacgtcttacgcgacattgtttgatttc 39725006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 119; Significance: 2e-60; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 387 - 561
Target Start/End: Complemental strand, 35965152 - 35964978
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    |||||||| |||||||||||||||||| || |||||| | |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  35965152 aaatcacctctcttcatctttttctctctatttcaatctgaataagtgatttttcacatagatctaggtttttttttcgtgatttcgtcatccgagtgtg 35965053  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    |||||||||||||||||||| | || | |||||||||||||||||| || ||| |||||||||||||||||||||    
T  35965052 gtggtgtgttgttcgtcgtcctgtgtggcgttgtttgatttcccgtcttattgtggtgttcatttgattcatatt 35964978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 387 - 565
Target Start/End: Original strand, 21090065 - 21090242
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||| | ||||||||||||||||| || |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||  | | ||    
T  21090065 aaatcactcatcttcatctttttctctctatttcaatataaataagtgatttt-cacatagatttaggttttttcttcgtgatttcatcatctaaatatg 21090163  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaag 565  Q
    ||||| |||||||||||||||| | ||||||||||||||||  ||| || |||||||||||||||||||||||||||||    
T  21090164 gtggtttgttgttcgtcgtcttgtacgacgttgtttgatttttcgtttttttgcggtgttcatttgattcatattgaag 21090242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 10389930 - 10389754
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||| | ||||||||||||||||| || |||||| ||||||||||| ||| ||||||||||||||||||||| |  |||||||||||||  ||||||    
T  10389930 aaatcactcatcttcatctttttctctctatttcaatctaaataagtgacttt-cacatagatctaggttttttccttttgatttcatcatctaagtgtg 10389832  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| |||||||||||||||| |||| ||||||||||||| |||| || ||||||||||||||||||||||||||||    
T  10389831 gtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattgaa 10389754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 51317898 - 51318074
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||| | ||||||||||||||||| || |||||| ||||||||||||||| |||||||||||||||||||||||  |||||||||||||  ||||||    
T  51317898 aaatcactcatcttcatctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttctttttgatttcatcatctaagtgtg 51317996  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||| | |||||||||||||||| |||| | |||||||||||||||| || |||||||||| |||||||||||||||||    
T  51317997 gtgatttgttgttcgtcgtcttgtgcggcattgtttgatttcccgtcttcttgcggtgttaatttgattcatattgaa 51318074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 388 - 564
Target Start/End: Complemental strand, 18139089 - 18138913
Alignment:
Q  388 aatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtgg 487  Q
    |||||| |||||||||| |||||||| || |||||| |||||||||||||||||||||| ||||||||||||||||  ||||||| ||| | ||||||||    
T  18139089 aatcacacctcttcatcattttctctctatttcaatctaaataagtgatttttcacatacatctaggttttttcttaatgatttcgtcacctgagtgtgg 18138990  T
Q  488 tggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||||||||||||||| |||| ||||||||||||| || | ||||||| ||||||||||||||  |||||||    
T  18138989 tggtgtgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttgatttctattgaa 18138913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 388 - 564
Target Start/End: Complemental strand, 49126302 - 49126126
Alignment:
Q  388 aatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtgg 487  Q
    |||||| |||||||||| |||||||| || |||||| |||||||||||||||||||||| ||||||||||||||||  ||||||| ||| | ||||||||    
T  49126302 aatcacacctcttcatcattttctctctatttcaatctaaataagtgatttttcacatacatctaggttttttcttaatgatttcgtcacctgagtgtgg 49126203  T
Q  488 tggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||||||||||||||| |||| ||||||||||||| || | ||||||| ||||||||||||||  |||||||    
T  49126202 tggtgtgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttgatttctattgaa 49126126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 393 - 564
Target Start/End: Original strand, 4643776 - 4643947
Alignment:
Q  393 cccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgagtgtggtgg 490  Q
    ||||||||||||||||||||| || |||||| ||||||||||||||  ||||||||||||| ||||||  ||| ||||||||||||||  ||||||||||    
T  4643776 cccctcttcatctttttctctctatttcaatctaaataagtgattt--cacatagatctagattttttttctttgtgatttcatcatctaagtgtggtgg 4643873  T
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    | |||||||||||||||| |||| |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  4643874 tttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaa 4643947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 10359723 - 10359547
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    |||||||||  |||||||||||||||| || ||| || |||||||||||||||  ||||| |||||||||||||||||||||||||||||||  ||||||    
T  10359723 aaatcacccaacttcatctttttctctctatttcgatctaaataagtgatttta-acatatatctaggttttttcttcgtgatttcatcatctaagtgtg 10359625  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| ||||||||| |||||| ||||  ||||||||||||||||| || ||| ||||||||||||||||||||||||    
T  10359624 gtggtttgttgttcgccgtcttttgcggtgttgtttgatttcccgtcttcttgtggtgttcatttgattcatattgaa 10359547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 12265367 - 12265543
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||||||||||||||||||| ||  || |||||| |||||||||||||||||||||||||||||||||| ||| ||||||||  ||||| |||||||    
T  12265367 aaatcacccctcttcatctttttatccctatttcaatctaaataagtgatttttcacatagatctaggttttctctacgtgattttgtcatctgagtgtg 12265466  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    | ||| |||||||||||||| | |||| |||||||||||||| ||||| |||| |||||||| |||||||||||||||    
T  12265467 gcggtttgttgttcgtcgtc-tgtgcggcgttgtttgatttctcgtatcgttgtggtgttcacttgattcatattgaa 12265543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 34024613 - 34024438
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||| ||||| |||||||||||||||||||||||  |||||||||||||  ||||||    
T  34024613 aaatcacccctcttcatctttttctctctatttcaatctaaataagttatttt-cacatagatctaggttttttctttttgatttcatcatctaagtgtg 34024515  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| |||||||||||||||| |  ||||||||||||||| || | || ||||||||||| ||||||||||||||||    
T  34024514 gtggtttgttgttcgtcgtcttgtatgacgttgtttgattttccatcttcttgcggtgttc-tttgattcatattgaa 34024438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 393 - 561
Target Start/End: Original strand, 35261109 - 35261277
Alignment:
Q  393 cccctcttcatctttttc-tctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggt 491  Q
    |||||||||||||||||| ||| || | |||| ||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||  |||||||||||    
T  35261109 cccctcttcatctttttcctctttattgcaatctaaataagtgatttt-cacatagatttaggttttttcttcgtgatttgatcatctaagtgtggtggt 35261207  T
Q  492 gtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    |||||||| |||||||| |||| ||||||||||||| |||| || |||||||||||||||||||||||||    
T  35261208 gtgttgtttgtcgtcttctgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatatt 35261277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 53616828 - 53616650
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgagtg 484  Q
    |||||||| ||||||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||||||||  ||| || |||||||||||  ||||    
T  53616828 aaatcaccactcttcatcgttttctctttatttcaatctaaataagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatctaagtg 53616730  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| | |||||||||||||||| |||| |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  53616729 tggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaa 53616650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 25273787 - 25273972
Alignment:
Q  387 aaatcacccctcttcatctt-----tttctctataattcaatataaataagtgatttttcacatagatctaggtttttt----cttcgtgatttcatcat 477  Q
    ||||||||||||||||||||     ||||||| || |||||| ||||||||||||||| ||||||||||||||||||||    ||| |||||||||||||    
T  25273787 aaatcacccctcttcatcttcatcttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttttttctttgtgatttcatcat 25273885  T
Q  478 ccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |  ||||||||||| |||||||||||||||| |||| |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  25273886 ctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaa 25273972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 418 - 564
Target Start/End: Original strand, 2624441 - 2624585
Alignment:
Q  418 ttcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacg 516  Q
    |||||| ||||||||||||||| |||||||||||||||||||| |||||||||||| ||||  ||||||||||||||||||||||||||||| |||| ||    
T  2624441 ttcaatctaaataagtgatttt-cacatagatctaggtttttttcttcgtgatttcgtcat--gagtgtggtggtgtgttgttcgtcgtcttgtgcggcg 2624537  T
Q  517 ttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    | |||||||||||||| ||||||||||||| |||||||||||||||||    
T  2624538 tagtttgatttcccgtcttgttgcggtgtttatttgattcatattgaa 2624585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 9529055 - 9528877
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgagtg 484  Q
    |||||||||||||| |||||||||||| || |||||| ||||||||||||||| ||||||||| || |||||||  ||| ||||||||||||||  ||||    
T  9529055 aaatcacccctctttatctttttctctttatttcaatctaaataagtgatttt-cacatagatttatgttttttttctttgtgatttcatcatctaagtg 9528957  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    || |||| |||||||||||||||| |||| |||||||||||||||||| ||  |||| ||||||||||||||||||||||    
T  9528956 tgatggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcgatgttcatttgattcatattgaa 9528877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 385 - 564
Target Start/End: Complemental strand, 38706889 - 38706710
Alignment:
Q  385 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagt 483  Q
    ||||||||||| ||||||||||||||||| || |||||| ||||||||||||||| ||||||||| |||||||||| ||| ||||||||||||||  |||    
T  38706889 taaaatcacccttcttcatctttttctctctatttcaatctaaataagtgatttt-cacatagatttaggtttttttctttgtgatttcatcatctaagt 38706791  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||| |||||||||||||||| |||  |||||||| ||||||||| ||  ||||||||| |||||||| ||||||||    
T  38706790 gtggtggtttgttgttcgtcgtcttgtgcagcgttgtttcatttcccgtcttcgtgcggtgttaatttgatttatattgaa 38706710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 397 - 556
Target Start/End: Complemental strand, 8009526 - 8009369
Alignment:
Q  397 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgtt 496  Q
    ||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||  ||||||||||| ||||    
T  8009526 tcttcatctttttctctctatttcaatctaaataagtgatttt-cacatagatctag-ttttttctttgtgatttcatcatctaagtgtggtggtttgtt 8009429  T
Q  497 gttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattc 556  Q
    |||||||||||| |||| |||||||||||||||||| ||  | |||||||||||||||||    
T  8009428 gttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcatacggtgttcatttgattc 8009369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 389 - 563
Target Start/End: Complemental strand, 9645724 - 9645550
Alignment:
Q  389 atcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgtgg 487  Q
    ||||||||||||||||||||| ||| || |||||| ||||||||||| ||| |||||||||||||||||||| ||| | ||||||||||||  |||||||    
T  9645724 atcacccctcttcatctttttgtctctatttcaatctaaataagtgacttt-cacatagatctaggtttttttctttgcgatttcatcatctaagtgtgg 9645626  T
Q  488 tggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattga 563  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||||  |  |||| |||||||||||||||||||||    
T  9645625 tggtgtgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcgtcgtgcgctgttcatttgattcatattga 9645550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 868069 - 868251
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaa-------tataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatcc 479  Q
    ||||||||||||||||||||||||||| || |||||       | ||||||||| ||||| ||||||||||||| ||||| ||| ||||||||||||||     
T  868069 aaatcacccctcttcatctttttctctctatttcaaatttcaatctaaataagttatttt-cacatagatctagattttt-ctttgtgatttcatcatct 868166  T
Q  480 gagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
     ||||||||||| |||||||||||||||| |||| |||||||||||||||||| || ||||||||||||||||||||||||||||    
T  868167 aagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaa 868251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 9283823 - 9284000
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttc-ttcgtgatttcatcatccgagtgt 485  Q
    |||||||||||||||||| |||||||| || |||||| |||||||||||||||| |||||||||||||||||||  || || |||||||||||  |||||    
T  9283823 aaatcacccctcttcatcgttttctctttatttcaatctaaataagtgattttt-acatagatctaggtttttttatttgtaatttcatcatctaagtgt 9283921  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||| | ||||||| |||||||| || | |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  9283922 ggtgatttgttgtttgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaa 9284000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 387 - 561
Target Start/End: Complemental strand, 31381848 - 31381675
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    |||||||||||  |||||||||||||| |  |||||| ||||||||||||||| |||||||||||| |||||||||| ||||||||||||||  ||||||    
T  31381848 aaatcaccccttctcatctttttctctctttttcaatttaaataagtgatttt-cacatagatctaagttttttctttgtgatttcatcatctaagtgtg 31381750  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    ||||| |||||||||||||||| |||  ||||||||||||| |||| ||  ||||||||| ||||||||||||||    
T  31381749 gtggtttgttgttcgtcgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtgttaatttgattcatatt 31381675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 43444305 - 43444482
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgt 485  Q
    ||||||||| ||||||||||||||||| || |||||| ||||||||||||||| |||||| ||||||||||||| ||| || |||||||||||  |||||    
T  43444305 aaatcacccatcttcatctttttctctttatttcaatctaaataagtgatttt-cacatatatctaggtttttttctttgtaatttcatcatctaagtgt 43444403  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||| | |||||||||||||||| |||| ||||||||||||| |||| |   |||||||||||||||||||||||||||    
T  43444404 ggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtctacgtgcggtgttcatttgattcatattgaa 43444482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 395 - 564
Target Start/End: Original strand, 56194519 - 56194690
Alignment:
Q  395 cctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttc---gtgatttcatcatccgagtgtggtggt 491  Q
    ||||||||||||||||||| || |||||| ||||||||||| ||| |||||||||||||||||||| |||   ||||||||||||||  |||||||||||    
T  56194519 cctcttcatctttttctctctatttcaatctaaataagtgacttt-cacatagatctaggtttttttttctttgtgatttcatcatctaagtgtggtggt 56194617  T
Q  492 gtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
     |||||||||||||||| |||| ||||||||| |||||||| || ||||||||||||||| |||| |||||||    
T  56194618 ttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaa 56194690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 387 - 567
Target Start/End: Complemental strand, 37188769 - 37188591
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||| | |||||||||||||||||||| |||||| ||||||||||||||| |||||| |||||| ||||||||| |||||||||||||   ||||||    
T  37188769 aaatcactcatcttcatctttttctctatatttcaatctaaataagtgatttt-cacatatatctag-ttttttctttgtgatttcatcatttaagtgtg 37188672  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagat 567  Q
    ||||| ||||||||||||| || |||| || ||||||||||||||  || ||||||||||||| |||||||| ||||||||    
T  37188671 gtggtttgttgttcgtcgttttgtgcggcgctgtttgatttcccgcctttttgcggtgttcatctgattcattttgaagat 37188591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 406 - 564
Target Start/End: Original strand, 29965565 - 29965724
Alignment:
Q  406 ttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtc 503  Q
    |||||||| || |||||| ||||||||||||||| ||||||||||||||||||||  ||| || |||||||||||  ||||||||| | |||||||||||    
T  29965565 ttttctctttatttcaatctaaataagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtgatttgttgttcgtc 29965663  T
Q  504 gtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| |||| |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  29965664 gtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaa 29965724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 381 - 564
Target Start/End: Complemental strand, 43154203 - 43154014
Alignment:
Q  381 gacttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--------cttcgtgatttc 472  Q
    ||||| |||||||||||||||||||||| |||| || |||||| ||||||||||||||| ||||||||||||||||||||        ||| |||||||     
T  43154203 gacttgaaatcacccctcttcatctttt-ctctctatttcaatctaaataagtgatttt-cacatagatctaggtttttttgttttttctttgtgatttt 43154106  T
Q  473 atcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||   ||||||||||| |||||||||||||||| || | |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  43154105 atcatttaagtgtggtggtttgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaa 43154014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 407 - 564
Target Start/End: Complemental strand, 46991287 - 46991130
Alignment:
Q  407 tttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgt 505  Q
    ||||||| || |||||| ||||| ||||||||| ||||||||||||| |||||| |||| ||||||  ||||| |||||||||||||||||||| |||||    
T  46991287 tttctctctatttcaatctaaatgagtgatttt-cacatagatctagatttttttcttcatgattttgtcatctgagtgtggtggtgtgttgtttgtcgt 46991189  T
Q  506 cttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||| || | |||||||||||||||| | |||||||||||||||||||||||||||||||    
T  46991188 cttctgtggcgttgtttgatttcccatcttgttgcggtgttcatttgattcatattgaa 46991130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 437 - 564
Target Start/End: Complemental strand, 3336284 - 3336156
Alignment:
Q  437 ttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgc-gacgttgtttgatttcccgtatt 535  Q
    |||||||||  ||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||| | ||| ||||||||||||||| || | ||    
T  3336284 ttttcacatctatctaggttttttcttcgtgattttgtcatctgagtgtggtggtgtgttgttcgtcgtcctgtgcggacgttgtttgattttccatctt 3336185  T
Q  536 gttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||||||||||||||||||||    
T  3336184 gttgcggtgttcatttgattcatattgaa 3336156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 20569164 - 20569344
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt----cttcgtgatttcatcatccgag 482  Q
    ||||||||||||||||| ||||||||| || |||||| ||||||| ||||||| ||||||||||||||||||||    |||  | |||||||||||  ||    
T  20569164 aaatcacccctcttcatttttttctctttatttcaatctaaataaatgatttt-cacatagatctaggttttttttttctttataatttcatcatctaag 20569262  T
Q  483 tgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||| | |||||||||||||||| ||||  |||||||||||| |||| ||  |||||||||||||||||||||||||||    
T  20569263 tgtggtgatttgttgttcgtcgtcttctgcggggttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaa 20569344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 50766686 - 50766512
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgt 485  Q
    |||||| |||||||||||||||||||| || |||||| ||||||| ||||||| |||||||||||| ||||||| ||| || |||||||||||  |||||    
T  50766686 aaatcatccctcttcatctttttctctttatttcaatctaaataaatgatttt-cacatagatctaagtttttttctttgtaatttcatcatctaagtgt 50766588  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||| | |||||||||||   || |||| |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  50766587 ggtgatttgttgttcgtc---ttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaa 50766512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 6972721 - 6972899
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgagtg 484  Q
    |||||||| |||||||||||||| ||| || |||||| ||||||||||| |||| ||||||||| | |||||||  ||| ||||||||||||||  ||||    
T  6972721 aaatcacctctcttcatctttttatctgtatttcaatctaaataagtgactttt-acatagatccatgttttttttctttgtgatttcatcatctaagtg 6972819  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||| |||||||||||||||| |||| ||||||||| ||||| || || |||| |||||||||| |||| |||||||    
T  6972820 tggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcctgtcttcttgcagtgttcattttattcctattgaa 6972899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 1531818 - 1531997
Alignment:
Q  387 aaatcacccctcttcatctttt-tctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgagt 483  Q
    |||||||||||||| ||||||| ||||| || |||||| ||||||||||||||| ||||||||||||| ||||||  ||| ||||||||||||||  |||    
T  1531818 aaatcacccctctttatcttttctctctctatttcaatctaaataagtgatttt-cacatagatctagattttttttctttgtgatttcatcatctaagt 1531916  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||| ||||||  |||||||| || | ||||||||||||||| || ||  ||||||||| ||||||||||| |||||    
T  1531917 gtggtggtttgttgtctgtcgtcttgtgtggcgttgtttgatttcctgtcttcgtgcggtgtttatttgattcatgttgaa 1531997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 394 - 564
Target Start/End: Complemental strand, 27594008 - 27593827
Alignment:
Q  394 ccctcttcatctttttctctataattcaatataaataagtgatttt-----------tcacatagatctaggttttttcttcgtgatttcatcatccgag 482  Q
    ||||||||||||||||||||||| |||||| |||||||| || |||           |||||||||||||  |||||||||||||||||| | ||| |||    
T  27594008 ccctcttcatctttttctctatatttcaatctaaataagcgagtttcacatagatcttcacatagatctatattttttcttcgtgatttcgttatctgag 27593909  T
Q  483 tgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||||||||||||||| |||| |||||| || ||||||||||||| || ||||| |||| |||| ||||||||||||    
T  27593908 tgtggtggtgtgttgttcgtcatcttgtgcgactttttttgatttcccgtctttttgcgatgtttatttaattcatattgaa 27593827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 397 - 564
Target Start/End: Complemental strand, 32952913 - 32952750
Alignment:
Q  397 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgtt 496  Q
    ||||||||||||||||| || |||||  |||||||||| |||||||||||||||||| ||||||||| |||||||| |||||  |||||| |||||||||    
T  32952913 tcttcatctttttctctctatttcaaattaaataagtg-tttttcacatagatctag-ttttttctttgtgatttcgtcatctaagtgtgttggtgtgtt 32952816  T
Q  497 gttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||| |||||||||||||  ||||||||||||  | | ||||| |||||||||||| ||||||||||||    
T  32952815 gtttgtcgtcttatgcg-ggttgtttgattt-tcatcttgttacggtgttcatttaattcatattgaa 32952750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 437 - 557
Target Start/End: Complemental strand, 1931843 - 1931723
Alignment:
Q  437 ttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattg 536  Q
    |||||||| |||||||||||||||| | ||||||||||||||  ||||| ||||||||||||||  |||||| | |||| |||||| ||||||||| |||    
T  1931843 ttttcacaaagatctaggttttttcattgtgatttcatcatctaagtgtagtggtgtgttgttcaccgtcttgtccgacattgtttcatttcccgtcttg 1931744  T
Q  537 ttgcggtgttcatttgattca 557  Q
    |||||||||||||||||||||    
T  1931743 ttgcggtgttcatttgattca 1931723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 399 - 564
Target Start/End: Complemental strand, 52098084 - 52097916
Alignment:
Q  399 ttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggt---ggtgtgt 495  Q
    |||||| |||||||  || |||||| ||||||||||||||||| |||||| |||  |||| ||||||||||||  |||||||||||||||   |||||||    
T  52098084 ttcatccttttctccctatttcaatctaaataagtgatttttcgcatagaactaaattttctcttcgtgattttgtcatccgagtgtggtggtggtgtgt 52097985  T
Q  496 tgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||| || ||||| |||   ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  52097984 tgtttgttgtcttgtgcagagttgtttgatttcccctattcttgtagtgttcatttgattcatattgaa 52097916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 401 - 564
Target Start/End: Original strand, 14183729 - 14183891
Alignment:
Q  401 catctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgtggtggtgtgttgtt 499  Q
    ||||||||||||| || |||||| ||||||||||||||| ||||  |||||| ||||||| ||| ||||||||| ||||  ||||||||||| |||||||    
T  14183729 catctttttctctctatttcaatctaaataagtgatttt-cacaaggatctaagtttttttctttgtgatttcaccatctaagtgtggtggtttgttgtt 14183827  T
Q  500 cgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||| ||||| ||||  |||||||||||| | || ||  |||||||||||||||||||||||||||    
T  14183828 cgtagtcttgtgcg-tgttgtttgattttctgtcttcatgcggtgttcatttgattcatattgaa 14183891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 397 - 564
Target Start/End: Complemental strand, 2115755 - 2115588
Alignment:
Q  397 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg--ttttttcttcgtgatttcatcatccgagtgtggtggtgtg 494  Q
    ||||||||||||||||| || |||||| ||||||||||| ||||||||||||| ||||  ||||||||| || |||||||||||  ||||||||| | ||    
T  2115755 tcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatttaggttttttttctttgtaatttcatcatctaagtgtggtgatttg 2115657  T
Q  495 ttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| |||||||| ||||  ||||||||||||| | | ||  |||| | ||||||| ||||||||||||    
T  2115656 ttgtttgtcgtcttgtgcg-tgttgtttgatttctcatcttcgtgcgatattcatttaattcatattgaa 2115588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 419 - 564
Target Start/End: Original strand, 44947353 - 44947501
Alignment:
Q  419 tcaatataaataagtgatttttcacatagatctaggtttttt----cttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcga 514  Q
    ||||| ||||||||||||||| | ||||||||||||||||||    ||| |||||||||| |||  ||||||||||| ||||| | || ||||| ||||     
T  44947353 tcaatctaaataagtgatttt-cgcatagatctaggttttttttttctttgtgatttcattatctaagtgtggtggtttgttggttgttgtcttgtgcgg 44947451  T
Q  515 cgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||||||||| ||  || ||||||||||||||| ||||||||    
T  44947452 cgttgtttgatttcccgtcttcgtgtggtgttcatttgattaatattgaa 44947501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 470 - 564
Target Start/End: Original strand, 47417657 - 47417751
Alignment:
Q  470 ttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||  | ||||||| | |||||||||||||||| |||| |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  47417657 ttcatcatctaaatgtggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaa 47417751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 484 - 564
Target Start/End: Original strand, 49410232 - 49410312
Alignment:
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||| |||||||||||||||| |||  |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  49410232 gtggtggtttgttgttcgtcgtcttgtgcagcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaa 49410312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 456 - 564
Target Start/End: Complemental strand, 51888351 - 51888243
Alignment:
Q  456 tttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgatt 555  Q
    ||||| ||||||||||| |  || ||||| || | |||||||||| ||||||||||||||||||||||||||| | | |||||||||||||| |||| ||    
T  51888351 ttttttttcgtgatttcgttgtctgagtgcggcgttgtgttgttcatcgtcttatgcgacgttgtttgatttcgcatcttgttgcggtgttcgtttggtt 51888252  T
Q  556 catattgaa 564  Q
    |||||||||    
T  51888251 catattgaa 51888243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 381 - 460
Target Start/End: Original strand, 47416790 - 47416868
Alignment:
Q  381 gacttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 460  Q
    ||||| ||||||||||||||||||||||||||| || |||||| ||||||||||| |||||||||||||||| |||||||    
T  47416790 gacttgaaatcacccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctaagtttttt 47416868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 455 - 564
Target Start/End: Complemental strand, 36204526 - 36204416
Alignment:
Q  455 ttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcga-cgttgtttgatttcccgtattgttgcggtgttcatttga 553  Q
    |||||||||||||||||| || ||  |||| || | |||||||||||||||| | | ||  |||||||||||||| | |||||||||||||||||||||     
T  36204526 ttttttcttcgtgatttcgtcgtctaagtgcggcgttgtgttgttcgtcgtcctgtacgggcgttgtttgatttcgcatattgttgcggtgttcatttgg 36204427  T
Q  554 ttcatattgaa 564  Q
    |||||||||||    
T  36204426 ttcatattgaa 36204416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 467 - 564
Target Start/End: Original strand, 18048863 - 18048960
Alignment:
Q  467 gatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||| |||||||| || |||| ||||||||| |||||||| || | |||||||||||||  ||  |||||||||||||| ||||||||||||||||    
T  18048863 gatttcgtcatccgaatgcggtgttgtgttgtttgtcgtcttgtgtggcgttgtttgattttgcgccttgttgcggtgttcgtttgattcatattgaa 18048960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 491 - 564
Target Start/End: Original strand, 43853446 - 43853519
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||| || |||| |||| |||||||||||||| ||||||||||||||| ||||||| |||||||||||    
T  43853446 tgtgttgttcatcatcttgtgcggcgttgtttgatttcgcgtattgttgcggtgctcatttggttcatattgaa 43853519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 394 - 564
Target Start/End: Original strand, 49680456 - 49680627
Alignment:
Q  394 ccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-----cttcgtgatttcatcatccgagtgtggt 488  Q
    |||||||||||||||||||| || ||||||  |||||||||||||| ||||| ||||||||||||||     ||| || |||||||||||  ||||||||    
T  49680456 ccctcttcatctttttctctttatttcaatccaaataagtgatttt-cacatggatctaggtttttttttttctttgtaatttcatcatctaagtgtggt 49680554  T
Q  489 ggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    | | |||| ||||||||||| ||    ||||||||||||| ||| ||  |||||    ||||||||||||||||||    
T  49680555 gatttgttattcgtcgtcttgtgttgtgttgtttgatttcacgtcttcgtgcgg---acatttgattcatattgaa 49680627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 387 - 475
Target Start/End: Complemental strand, 35351337 - 35351250
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatc 475  Q
    ||||||| | |||||||| ||||| || || |||||| |||||||||||| || |||||||||||||||||||||| ||||||||||||    
T  35351337 aaatcacacatcttcatccttttcgctttatttcaatttaaataagtgatatt-cacatagatctaggttttttctacgtgatttcatc 35351250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 387 - 442
Target Start/End: Complemental strand, 5333636 - 5333581
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttca 442  Q
    ||||||| | ||||||||||||||||| || |||||||||||||||||||||||||    
T  5333636 aaatcacacatcttcatctttttctctctatttcaatataaataagtgatttttca 5333581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 465 - 564
Target Start/End: Original strand, 28857380 - 28857479
Alignment:
Q  465 gtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||||| ||  |||| || | |||||||||||| ||||| |||| |||||||||||| | ||| | |||||||||||| |||| |||||||||||    
T  28857380 gtgatttcatcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcggcgttgtttgattccgcgtctagttgcggtgttcgtttgtttcatattgaa 28857479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 394 - 440
Target Start/End: Complemental strand, 5333701 - 5333655
Alignment:
Q  394 ccctcttcatctttttctctataattcaatataaataagtgattttt 440  Q
    |||||||||||||||||||| || |||||||||||||||||||||||    
T  5333701 ccctcttcatctttttctctctatttcaatataaataagtgattttt 5333655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 462 - 564
Target Start/End: Complemental strand, 6155359 - 6155258
Alignment:
Q  462 ttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    ||||||||||| || || ||||| |||| |||||||| |||| |||| |||| ||||||||||||||  || |||| || |||||| |||||||||||||    
T  6155359 ttcgtgatttcgtcgtctgagtgcggtgttgtgttgt-cgtcatcttgtgcgtcgttgtttgatttcgtgttttgtcgcagtgttcgtttgattcatatt 6155261  T
Q  562 gaa 564  Q
    |||    
T  6155260 gaa 6155258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 491 - 561
Target Start/End: Original strand, 9643392 - 9643462
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    ||||||||||||||||||  |||||||||||||||||| | | ||||||| |||||| |||| ||||||||    
T  9643392 tgtgttgttcgtcgtcttgagcgacgttgtttgatttctcatcttgttgcagtgttcgtttggttcatatt 9643462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 491 - 561
Target Start/End: Original strand, 21405530 - 21405600
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    ||||||||| ||||||||  ||||| |||||||||||  ||| ||| ||||||||||||||||||||||||    
T  21405530 tgtgttgtttgtcgtcttgggcgacattgtttgatttttcgtcttgatgcggtgttcatttgattcatatt 21405600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 426 - 555
Target Start/End: Complemental strand, 21554946 - 21554817
Alignment:
Q  426 aaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtctta-tgcgacgttgtttga 524  Q
    |||||||||||||| |||||| |||||| | ||||||| |||||||| |  || ||||| ||||  |||||||||||| ||||| |||  | ||||||||    
T  21554946 aaataagtgatttt-cacataaatctagatattttctttgtgatttcgttgtctgagtgaggtgacgtgttgttcgtcatcttagtgccgcattgtttga 21554848  T
Q  525 tttcccgtattgttgcggtgttcatttgatt 555  Q
    |||| ||| |||||| | |||||||||||||    
T  21554847 tttctcgtcttgttgtgatgttcatttgatt 21554817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 480 - 546
Target Start/End: Complemental strand, 31359863 - 31359797
Alignment:
Q  480 gagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgtt 546  Q
    |||||||||| |||||| ||||||||||| ||||||||||| ||||||| ||| ||||||| |||||    
T  31359863 gagtgtggtgttgtgttattcgtcgtcttgtgcgacgttgtatgatttcacgtcttgttgcagtgtt 31359797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 462 - 564
Target Start/End: Original strand, 52944286 - 52944388
Alignment:
Q  462 ttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    ||||||||||| |  || ||||| || | ||||||||||||||| || |||| |||||||| ||||  ||| |||||||||||||| |||| ||||||||    
T  52944286 ttcgtgatttcgtagtctgagtgcggcgttgtgttgttcgtcgttttgtgcggcgttgtttaattttgcgtcttgttgcggtgttcgtttgtttcatatt 52944385  T
Q  562 gaa 564  Q
    |||    
T  52944386 gaa 52944388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 381 - 470
Target Start/End: Original strand, 1008201 - 1008289
Alignment:
Q  381 gacttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatt 470  Q
    ||||| ||||||| | ||| ||||||||||||| || || ||| ||||||||||| |||||||||| || ||| ||||||||||||||||    
T  1008201 gacttgaaatcactcatctgcatctttttctctctattttaatctaaataagtga-ttttcacataaatttagtttttttcttcgtgatt 1008289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 496 - 564
Target Start/End: Complemental strand, 2069680 - 2069612
Alignment:
Q  496 tgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||| || | ||||||||||||||||||| | | |||||||||| |||||||| |||||||||||    
T  2069680 tgttcgtcatcctgtgcgacgttgtttgatttcgcatcttgttgcggtattcatttggttcatattgaa 2069612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 491 - 562
Target Start/End: Original strand, 9713916 - 9713987
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattg 562  Q
    ||||||||||| |||| | ||||||||||||||||||| | ||||||||||| |||| |||  |||||||||    
T  9713916 tgtgttgttcgccgtcatgtgcgacgttgtttgatttcacatattgttgcggagttcgtttctttcatattg 9713987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 491 - 546
Target Start/End: Original strand, 22300853 - 22300908
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgtt 546  Q
    |||||||||||||||||| |||| |||||||||||||| |||  ||||||||||||    
T  22300853 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtcctgttgcggtgtt 22300908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 462 - 555
Target Start/End: Complemental strand, 52204465 - 52204372
Alignment:
Q  462 ttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgatt 555  Q
    ||||||||||| ||||  |||||||  | || ||||||||||||||| || ||| |||||||||||  ||| ||||| |||||||| |||||||    
T  52204465 ttcgtgatttcgtcatttgagtgtgacgttgagttgttcgtcgtcttgtgtgacattgtttgattttgcgtcttgttacggtgttcgtttgatt 52204372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 437 - 564
Target Start/End: Complemental strand, 41255508 - 41255380
Alignment:
Q  437 ttttcacatagatctaggttttttc-ttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtatt 535  Q
    |||||||||| || ||||||||||  ||||||||||| ||  |  ||| | ||| | ||||||| || ||||| ||||||||| ||| ||||||||| ||    
T  41255508 ttttcacataaatttaggtttttttattcgtgatttcgtcgactaagtatagtgttatgttgtttgttgtcttgtgcgacgttatttaatttcccgtctt 41255409  T
Q  536 gttgcggtgttcatttgattcatattgaa 564  Q
     |||||  |||||||||||||||| ||||    
T  41255408 cttgcgacgttcatttgattcatactgaa 41255380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 564
Target Start/End: Original strand, 7393245 - 7393348
Alignment:
Q  462 ttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgtt-gtttgatttcccgtattgttgcggtgttcatttgattcatat 560  Q
    ||||||||||| || | ||||||  ||| ||||||| |||||||||| | |||| || |||||||||| | | |||||| ||||||| |||||||| |||    
T  7393245 ttcgtgatttcgtcgttcgagtgcagtgttgtgttgctcgtcgtcttgttcgacatttgtttgatttcacatcttgttgtggtgttcgtttgattcctat 7393344  T
Q  561 tgaa 564  Q
    ||||    
T  7393345 tgaa 7393348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 462 - 564
Target Start/End: Complemental strand, 52934078 - 52933975
Alignment:
Q  462 ttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtg-ttcatttgattcatat 560  Q
    ||||| |||||||| || ||||| || | ||||||||||||| | || |||  |||||||||||||| | | ||||||||||| ||  ||||||||||||    
T  52934078 ttcgttatttcatcgtctgagtgcggcgttgtgttgttcgtcattttgtgcagcgttgtttgatttcgcatcttgttgcggtgcttattttgattcatat 52933979  T
Q  561 tgaa 564  Q
    ||||    
T  52933978 tgaa 52933975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 418 - 528
Target Start/End: Original strand, 36194638 - 36194746
Alignment:
Q  418 ttcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgt 517  Q
    |||||| ||||||||||||||| |||||| ||| || |||| | ||||||||||| |  ||  |||| |  | |||||||||||||||||| |||| |||    
T  36194638 ttcaatttaaataagtgatttt-cacatacatcaagtttttct-ttcgtgatttcgttgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcgt 36194735  T
Q  518 tgtttgatttc 528  Q
    |||||||||||    
T  36194736 tgtttgatttc 36194746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 491 - 561
Target Start/End: Original strand, 55227982 - 55228052
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    ||||||||| |||||||| ||| |||||||| |||||  ||| || ||||||||||| |||||||| ||||    
T  55227982 tgtgttgtttgtcgtcttgtgcaacgttgttagattttgcgttttattgcggtgttcgtttgattcctatt 55228052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 564
Target Start/End: Complemental strand, 22038907 - 22038834
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||||||| | || || | |||||||||||||| ||| |||||| |||| || |||| |||||||||||    
T  22038907 tgtgttgttcgtccttttgtgtggcgttgtttgatttcgcgtcttgttgtggtgctcgtttggttcatattgaa 22038834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 560
Target Start/End: Original strand, 36161719 - 36161784
Alignment:
Q  495 ttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatat 560  Q
    |||||||| ||||| |||| |||||||||||||  ||| |||||||||||||| |||  |||||||    
T  36161719 ttgttcgttgtcttgtgcgtcgttgtttgattttacgttttgttgcggtgttcgttttgttcatat 36161784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 405 - 460
Target Start/End: Original strand, 23100617 - 23100673
Alignment:
Q  405 tttttctctataattcaatataaataagtga-tttttcacatagatctaggtttttt 460  Q
    ||||||||| ||||||||| ||||||||||| ||||| |||||||| || |||||||    
T  23100617 tttttctctctaattcaatctaaataagtgatttttttacatagatttatgtttttt 23100673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 491 - 527
Target Start/End: Complemental strand, 47320496 - 47320460
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgattt 527  Q
    |||||||||||||||||| |||| |||||||||||||    
T  47320496 tgtgttgttcgtcgtcttgtgcggcgttgtttgattt 47320460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 117; Significance: 3e-59; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 387 - 567
Target Start/End: Original strand, 37169128 - 37169308
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    |||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||| |||||||||    
T  37169128 aaatcacctctcttcacctttttctctctaattcaatataaataagtgatttttcacatagatctagattttttcttcttgatttcgtcacccgagtgtg 37169227  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagat 567  Q
     |||| |||||| ||||||||| |||  ||||||||||||| |||||||||||||||| ||||||||||||||| ||||||    
T  37169228 atggtctgttgtccgtcgtcttgtgcagcgttgtttgattttccgtattgttgcggtgctcatttgattcatatcgaagat 37169308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 22802919 - 22803096
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||| ||||||||||||||||||| || |||||| ||||||||||||||||||| |||||||||||||| |||  ||| |||| ||||  |||||||    
T  22802919 aaatcactcctcttcatctttttctctctatttcaatctaaataagtgatttttcacgtagatctaggttttctctatgtgctttcgtcatttgagtgtg 22803018  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    | ||| ||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  22803019 gcggtttgttgttcgtcgtcttatgcggcgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaa 22803096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 46934540 - 46934716
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||||||||||||||||| ||||| || |||||| ||||||||||||||| |||||||||| ||||||||||||  |||||||||||||  ||||||    
T  46934540 aaatcacccctcttcatctttctctctctatttcaatctaaataagtgatttt-cacatagatccaggttttttcttgttgatttcatcatctaagtgtg 46934638  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| |||||||||||||||| ||||  ||||||||||||||||| || ||||||||||||||||||||||||||||    
T  46934639 gtggtttgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaa 46934716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 387 - 567
Target Start/End: Original strand, 29503360 - 29503539
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||||| ||||||| |||||||||||| |||||| ||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||  ||||||    
T  29503360 aaatcacccatcttcatatttttctctatatttcaatctaaataattgatttt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtg 29503458  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagat 567  Q
    ||||| |||||||||||||||| |||| || |||||||||| |||| || ||||||||||||| |||||||| ||||||||    
T  29503459 gtggtttgttgttcgtcgtcttgtgcggcgctgtttgattttccgtcttcttgcggtgttcatctgattcattttgaagat 29503539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 46178474 - 46178643
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    |||||| |||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  46178474 aaatcatccctcttcatctttttctctctaattcaatctaaataagtgctttttcacatagatctaggttttttcttcgtgatttcgtcttccgagtgtg 46178573  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||| ||||||||| |||| |||   |||||||        |||||||||| |||||||||||||||||||||||    
T  46178574 gtggtgtattgttcgtcatcttgtgcagtgttgttt--------gtattgttgcagtgttcatttgattcatattgaa 46178643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 25162334 - 25162510
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgt 485  Q
    ||||||||| ||||||||||||||||| || |||||| ||||||||||||||  |||||||||||||||||||| ||| ||||||||||||||  |||||    
T  25162334 aaatcacccatcttcatctttttctctctatttcaatctaaataagtgattt--cacatagatctaggtttttttctttgtgatttcatcatctaagtgt 25162431  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||| || |||||||||||||||| |||| |||||||||||||||| | ||  ||||||||||||||| |||||||||||    
T  25162432 ggtagtttgttgttcgtcgtcttgtgcggcgttgtttgatttcccatcttcgtgcggtgttcatttgtttcatattgaa 25162510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 36906019 - 36906196
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgt 485  Q
    ||||||||| ||||||||||||||||| || |||||||||||||||||||||| ||||||||| |||||||||| ||| || |||||||||||  |||||    
T  36906019 aaatcacccttcttcatctttttctctttatttcaatataaataagtgatttt-cacatagatttaggtttttttctttgtaatttcatcatctaagtgt 36906117  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||| | |||||||||||||||| |||| |||||||||||||||||| ||  ||  |||||||||||||||||||||||    
T  36906118 ggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgtagtgttcatttgattcatattgaa 36906196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 39917573 - 39917398
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    |||||| || ||||||| ||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||| | ||||||||||||||  ||||||    
T  39917573 aaatcatccatcttcatatttttctctctaattcaatctaaataagtgatttt-cacatagatctaggttttttccttgtgatttcatcatctaagtgtg 39917475  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| |||||||||| ||||| | ||||||||||||||||  ||| ||  |||||||||||||||||||||||||||    
T  39917474 gtggtttgttgttcgttgtcttgtacgacgttgtttgattt-tcgtcttcgtgcggtgttcatttgattcatattgaa 39917398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 392 - 564
Target Start/End: Original strand, 32607370 - 32607543
Alignment:
Q  392 acccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgagtgtggtg 489  Q
    ||||||||||||| |||||||| || |||||| ||||||||||||||| ||||||||||||||||||||  ||| || |||||||||||  |||||||||    
T  32607370 acccctcttcatcattttctctttatttcaatctaaataagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatctaagtgtggtg 32607468  T
Q  490 gtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
     | |||||||||||||||| || | |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  32607469 atttgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaa 32607543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 385 - 564
Target Start/End: Complemental strand, 25631706 - 25631526
Alignment:
Q  385 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgag 482  Q
    |||||||| |||||| ||||||||||||| || |||||| ||||||||||||||| ||||||||||||||||||||  ||| ||||||||||||||  ||    
T  25631706 taaaatcatccctctccatctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttttctttgtgatttcatcatctaag 25631608  T
Q  483 tgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||| ||||||||  |||||| |||| |||||||| ||||||||| ||  |||||||||||||||||| ||||||||    
T  25631607 tgtggtggtttgttgttctccgtcttgtgcggcgttgtttcatttcccgtcttcgtgcggtgttcatttgatttatattgaa 25631526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 393 - 564
Target Start/End: Complemental strand, 35499372 - 35499198
Alignment:
Q  393 cccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt----cttcgtgatttcatcatccgagtgtggt 488  Q
    ||||||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||||||||||    ||| || ||||||| |||  ||||||||    
T  35499372 cccctcttcatctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggttttttttttctttgtaatttcattatctaagtgtggt 35499274  T
Q  489 ggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    | | |||||||||||||||| |||| |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  35499273 gatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaa 35499198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 49552400 - 49552224
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    |||||||||||||||||| |||| ||| || |||||| ||||||||||| ||| |||||  |||||||||||||||| ||||||||||||||  | ||||    
T  49552400 aaatcacccctcttcatcattttttctctatttcaatctaaataagtgaattt-cacattaatctaggttttttctttgtgatttcatcatctaaatgtg 49552302  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| |||||||||||||||| |||| |||||||||||||| ||| || ||||||||||||||| ||||| ||||||    
T  49552301 gtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttctcgttttcttgcggtgttcattttattcacattgaa 49552224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 385 - 564
Target Start/End: Complemental strand, 50611596 - 50611418
Alignment:
Q  385 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatccgagt 483  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||| ||||||||||| ||||||||| ||||||||||||||  |||    
T  50611596 taaaatcacccctcttcatctttttctctatatttcaatctaaataagtga-ttttcatatagatctaggtttttttctttgtgatttcatcatctaagt 50611498  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||| |||| | ||||||||||||||||||| || ||||| |||| ||||  |  |||||||||||||||||| ||||||||    
T  50611497 gtgatggtttattgttcgtcgtcttatgcggcg-tgtttcattttccgtcctcgtgcggtgttcatttgatttatattgaa 50611418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 385 - 564
Target Start/End: Original strand, 4178460 - 4178639
Alignment:
Q  385 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagt 483  Q
    ||||||||||| ||||||||||||||||| || |||||| ||||||||||||||| || ||| |||||| |||||| ||| ||||||||||||||  |||    
T  4178460 taaaatcacccatcttcatctttttctctctatttcaatctaaataagtgatttt-cagataaatctagctttttttctttgtgatttcatcatctaagt 4178558  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||| |||| ||| ||||||| |||| |||||||| ||||||||| ||  |||||||||||||||||| ||||||||    
T  4178559 gtggtggtttgtttttcatcgtcttgtgcggcgttgtttcatttcccgtcttcgtgcggtgttcatttgatttatattgaa 4178639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 44907576 - 44907399
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg--ttttttcttcgtgatttcatcatccgagtg 484  Q
    ||||||||||||||||||||||||||| || |||||| |||| |||||| ||||||||||||||||||  ||||||||| || |||||||||||  ||||    
T  44907576 aaatcacccctcttcatctttttctctttatttcaatctaaacaagtga-ttttcacatagatctaggttttttttctttgtaatttcatcatctaagtg 44907478  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| | |||||||||||||||| |||| |||||||||||||||  | ||  |||||||||||||| ||||||||||||    
T  44907477 tggtgatttgttgttcgtcgtcttgtgcg-cgttgtttgatttcctatcttcgtgcggtgttcatttaattcatattgaa 44907399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 386 - 564
Target Start/End: Complemental strand, 38855215 - 38855036
Alignment:
Q  386 aaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgagt 483  Q
    |||||||||||||||||||||||||||| ||  ||||| ||||||||||||||| ||||||||||||| ||||||  ||| ||||||||||||||  |||    
T  38855215 aaaatcacccctcttcatctttttctctctatatcaatctaaataagtgatttt-cacatagatctagattttttttctttgtgatttcatcatctaagt 38855117  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||| |||| |||||||||| ||||| || | |||||||| || ||||||  |  |||||||||||||||||| ||||||||    
T  38855116 gtgatggtttgttgttcgttgtcttgtgtggcgttgtttcatctcccgtcctcgtgcggtgttcatttgatttatattgaa 38855036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 385 - 530
Target Start/End: Original strand, 4172462 - 4172607
Alignment:
Q  385 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagt 483  Q
    |||||||| || ||||||||||||||||| || |||||| ||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||  |||    
T  4172462 taaaatcatccatcttcatctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggtttttttctttgtgatttcatcatctaagt 4172560  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttccc 530  Q
    |||||||| |||| ||||||||||| ||||  ||||||| |||||||    
T  4172561 gtggtggtttgtttttcgtcgtcttgtgcggtgttgtttcatttccc 4172607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 387 - 510
Target Start/End: Complemental strand, 38440754 - 38440632
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||| |||||| |||||||||||| || |||||| ||||||||||||||| |||||||||||||||||||||||  ||||||||| |||  ||||||    
T  38440754 aaatcactcctctttatctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttctttttgatttcatgatcaaagtgtg 38440656  T
Q  487 gtggtgtgttgttcgtcgtcttat 510  Q
    ||||| ||||||||||||||||||    
T  38440655 gtggtttgttgttcgtcgtcttat 38440632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 42719418 - 42719591
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||| | ||||| | ||||||||| || |||||| ||||||||||||||| ||  |||||||||||||||     |||| |||||||||  ||||||    
T  42719418 aaatcactcatcttcgtatttttctctctatttcaatttaaataagtgatttt-catgtagatctaggtttttat---gtgagttcatcatctaagtgtg 42719513  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| |||||||||||||||| |||| ||||||||||||| |||| ||  |||||||||||||||||||||||||||    
T  42719514 gtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaa 42719591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 14464405 - 14464584
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg---ttttttcttcgtgatttcatcatccgagt 483  Q
    ||||||||||| ||||||||||||||| || |||||| ||||||||||| |||||||||||||||| |   ||||||||| ||||||||||| ||  |||    
T  14464405 aaatcacccctattcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctaagtttttttttctttgtgatttcatcttctaagt 14464503  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||| | |||  ||| |||| |  |||| |||||||| ||||||||| ||  |||||||||||||||||||||||||||    
T  14464504 gtggtgatttgtcattcatcgtttcgtgcggcgttgtttaatttcccgtcttcgtgcggtgttcatttgattcatattgaa 14464584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 12115991 - 12116172
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt----cttcgtgatttcatcatccgag 482  Q
    |||||| | ||||||||||||| |||| || |||||| ||||||||||||||| |||| |||||||||||||||    ||| || ||||||| |||  ||    
T  12115991 aaatcatctctcttcatcttttcctctttatttcaatctaaataagtgatttt-cacaaagatctaggttttttttttctttgtaatttcattatctaag 12116089  T
Q  483 tgtggtggtgt-gttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||| | | ||||||||| ||||| |||| |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  12116090 tgtggtgattttgttgttcgttgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaa 12116172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 455 - 564
Target Start/End: Complemental strand, 36734801 - 36734692
Alignment:
Q  455 ttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgat 554  Q
    |||||||||||||||||| |||||| | |||| ||||||||||||||||||||| |||| ||||||||||||| |||| || ||||||||||||||||||    
T  36734801 ttttttcttcgtgatttcgtcatccaaatgtgatggtgtgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttattgcggtgttcatttgat 36734702  T
Q  555 tcatattgaa 564  Q
    ||||| ||||    
T  36734701 tcataatgaa 36734692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 51202426 - 51202254
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttc---gtgatttcatcatccgagt 483  Q
    ||||||||| ||||||| ||||||||| || |||||| |||||        ||||||||||||||||||||||| |||   ||||||||||||||  |||    
T  51202426 aaatcacccatcttcatatttttctctctatttcaatctaaat--------tttcacatagatctaggtttttttttctttgtgatttcatcatctaagt 51202335  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||| ||||||| |||||||| |||| |||||||||||||||| |  |  |||||||||||||||||||||||||||    
T  51202334 gtggtggtttgttgtttgtcgtcttgtgcggcgttgtttgatttcccatcgtcgtgcggtgttcatttgattcatattgaa 51202254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 425 - 564
Target Start/End: Complemental strand, 30648858 - 30648719
Alignment:
Q  425 taaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttg 523  Q
    ||||||||||| ||| ||||||||||||| |||||| ||| ||||||||||||||  ||||||||||| |||||||||||||||| ||||  ||||||||    
T  30648858 taaataagtgacttt-cacatagatctagttttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggtgttgtttg 30648760  T
Q  524 atttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
     |||||| | || ||||||||||||||| ||||||||||||    
T  30648759 ctttcccatcttcttgcggtgttcattttattcatattgaa 30648719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 397 - 561
Target Start/End: Original strand, 17237710 - 17237876
Alignment:
Q  397 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttc---gtgatttcatcatccgagtgtggtggtgt 493  Q
    ||||||||| ||||||| || |||||| ||||||||||||||| ||||||||| |||||||||| |||   ||||||||||||||  ||||||||||| |    
T  17237710 tcttcatctgtttctctctatttcaatctaaataagtgatttt-cacatagatttaggtttttttttctttgtgatttcatcatctaagtgtggtggttt 17237808  T
Q  494 gttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    |||||| |||||||| |||| ||||||||||| ||  || ||   |||||||| ||||||||||||||    
T  17237809 gttgtttgtcgtcttgtgcggcgttgtttgatatcttgttttcgcgcggtgttgatttgattcatatt 17237876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 418 - 519
Target Start/End: Complemental strand, 47980809 - 47980708
Alignment:
Q  418 ttcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgt 517  Q
    |||||| |||||||||||||||||||||| |||||||| |||| ||||||||||| |||| ||| ||||||||| |||||||| |||||||||||| |||    
T  47980809 ttcaatctaaataagtgatttttcacataaatctaggtcttttattcgtgatttcgtcattcgattgtggtggtttgttgttcatcgtcttatgcggcgt 47980710  T
Q  518 tg 519  Q
    ||    
T  47980709 tg 47980708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 418 - 519
Target Start/End: Complemental strand, 47990096 - 47989995
Alignment:
Q  418 ttcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgt 517  Q
    |||||| |||||||||||||||||||||| |||||||| |||| ||||||||||| |||| ||| ||||||||| |||||||| |||||||||||| |||    
T  47990096 ttcaatctaaataagtgatttttcacataaatctaggtcttttattcgtgatttcgtcattcgattgtggtggtttgttgttcatcgtcttatgcggcgt 47989997  T
Q  518 tg 519  Q
    ||    
T  47989996 tg 47989995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 418 - 519
Target Start/End: Complemental strand, 47999383 - 47999282
Alignment:
Q  418 ttcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgt 517  Q
    |||||| |||||||||||||||||||||| |||||||| |||| ||||||||||| |||| ||| ||||||||| |||||||| |||||||||||| |||    
T  47999383 ttcaatctaaataagtgatttttcacataaatctaggtcttttattcgtgatttcgtcattcgattgtggtggtttgttgttcatcgtcttatgcggcgt 47999284  T
Q  518 tg 519  Q
    ||    
T  47999283 tg 47999282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 418 - 519
Target Start/End: Complemental strand, 48008670 - 48008569
Alignment:
Q  418 ttcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgt 517  Q
    |||||| |||||||||||||||||||||| |||||||| |||| ||||||||||| |||| ||| ||||||||| |||||||| |||||||||||| |||    
T  48008670 ttcaatctaaataagtgatttttcacataaatctaggtcttttattcgtgatttcgtcattcgattgtggtggtttgttgttcatcgtcttatgcggcgt 48008571  T
Q  518 tg 519  Q
    ||    
T  48008570 tg 48008569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 388 - 526
Target Start/End: Original strand, 2342390 - 2342528
Alignment:
Q  388 aatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatcta-ggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||| |||||||||||||||||||| || |||||| ||||||||||| |||||||||| |||||   ||||||||| ||||||||||||||  ||||||    
T  2342390 aatcaaccctcttcatctttttctctctatttcaatctaaataagtga-ttttcacatatatctatatttttttctttgtgatttcatcatctaagtgtg 2342488  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatt 526  Q
    ||||| |||| ||||| ||||  |||| ||||||||||||    
T  2342489 gtggtttgttattcgttgtctagtgcggcgttgtttgatt 2342528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 405 - 564
Target Start/End: Original strand, 31793997 - 31794145
Alignment:
Q  405 tttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcg 504  Q
    |||||||||||  |||||| ||||||||||||||| |||||||||||        || |||||||||  ||||| |||||| ||||||||||||||||||    
T  31793997 tttttctctat--ttcaatctaaataagtgatttt-cacatagatct--------tcctcgtgattttgtcatctgagtgtagtggtgtgttgttcgtcg 31794085  T
Q  505 tcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    | || |||| ||||||||||||| |  | |||||||||||||||||||||||||||||||    
T  31794086 ttttgtgcggcgttgtttgattttctatcttgttgcggtgttcatttgattcatattgaa 31794145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 481 - 564
Target Start/End: Original strand, 21488082 - 21488165
Alignment:
Q  481 agtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||||| ||||||| |||||||| |||| |||||||||||||||||| || |||||||||| |||||||||||||||||    
T  21488082 agtgtggtggtatgttgtttgtcgtcttgtgcggcgttgtttgatttcccgtcttcttgcggtgtttatttgattcatattgaa 21488165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 465 - 564
Target Start/End: Complemental strand, 3849018 - 3848919
Alignment:
Q  465 gtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||||   ||||||||||| |||||||||||||||| |||| ||||||||| |||||| | || ||||||||||||||| |||| |||||||    
T  3849018 gtgatttcatcatgtaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccatcttcttgcggtgttcattttattcctattgaa 3848919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 387 - 460
Target Start/End: Complemental strand, 3850632 - 3850560
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 460  Q
    ||||||||||||||||||||||||||| || |||||| |||||||||||  |||||||||||||||||||||||    
T  3850632 aaatcacccctcttcatctttttctctctatttcaatctaaataagtga-ctttcacatagatctaggtttttt 3850560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 381 - 564
Target Start/End: Original strand, 25849712 - 25849884
Alignment:
Q  381 gacttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccg 480  Q
    ||||| ||||||||| | ||| ||||||||| | || ||||||  | ||||||||| || ||||||||||||  |||||||||| | ||||| |          
T  25849712 gacttgaaatcacccttattcgtctttttctttctatttcaattcagataagtgatgtt-cacatagatctaaattttttcttcataatttcgt------ 25849804  T
Q  481 agtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||||||||||||    |||||| |||  |||||||| ||||||||| || ||||||||||||||||||||||||||||    
T  25849805 agtgtggtggtgtgttgt----cgtcttgtgcagcgttgttttatttcccgtcttcttgcggtgttcatttgattcatattgaa 25849884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 467 - 564
Target Start/End: Complemental strand, 4396463 - 4396366
Alignment:
Q  467 gatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||| |||||||| || |||| ||||||||| |||||||| || | |||||||||||||  ||  |||||||||||||| ||||||||||||||||    
T  4396463 gatttcgtcatccgaatgcggtgttgtgttgtttgtcgtcttgtgtggcgttgtttgattttgcgccttgttgcggtgttcgtttgattcatattgaa 4396366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 457 - 562
Target Start/End: Original strand, 29239292 - 29239397
Alignment:
Q  457 ttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattc 556  Q
    |||| |||||||||||||| || ||||| || | |||||||||||||||||| |||| || ||||||||||| ||| |||||| ||||||| |||| |||    
T  29239292 tttttttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgtcgtcttgtgcggcgctgtttgatttcacgtcttgttgtggtgttcgtttggttc 29239391  T
Q  557 atattg 562  Q
     |||||    
T  29239392 gtattg 29239397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 405 - 546
Target Start/End: Original strand, 54378816 - 54378956
Alignment:
Q  405 tttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcg 504  Q
    |||||||||  | |||||| ||||| ||||||||||||| ||||||||  |||||||||||||||||  ||| | |||||||||| |||||  |||||||    
T  54378816 tttttctctccatttcaatctaaatgagtgatttttcacgtagatctaa-ttttttcttcgtgattttgtcacctgagtgtggtgatgtgtatttcgtcg 54378914  T
Q  505 tcttatgcgacgttgtttgatttcccgtattgttgcggtgtt 546  Q
    |||| |||||   ||||||||||  ||| || ||||||||||    
T  54378915 tcttgtgcgatcatgtttgatttgtcgtcttattgcggtgtt 54378956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 454 - 564
Target Start/End: Complemental strand, 12947416 - 12947306
Alignment:
Q  454 gttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttga 553  Q
    ||||||| ||||||||||| || |  ||||| ||   |||||||||||||||||| |||| |||||||||||||| | | |||||| ||||||| ||||     
T  12947416 gtttttttttcgtgatttcgtcgtttgagtgcggctttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttgttgtggtgttcgtttgg 12947317  T
Q  554 ttcatattgaa 564  Q
    |||||||||||    
T  12947316 ttcatattgaa 12947306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 507 - 564
Target Start/End: Original strand, 52496926 - 52496983
Alignment:
Q  507 ttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||||||||||||| |||||||||| ||||||| |||||||| |||||||    
T  52496926 ttatgcgacgttgtttgatttcacgtattgttgaggtgttcgtttgattcttattgaa 52496983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 387 - 449
Target Start/End: Complemental strand, 36735329 - 36735267
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagat 449  Q
    |||||| |||||||||| ||| |||||||| |||||| ||||||||||||||||| |||||||    
T  36735329 aaatcatccctcttcatttttctctctatatttcaatttaaataagtgatttttctcatagat 36735267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 457 - 564
Target Start/End: Complemental strand, 6910810 - 6910709
Alignment:
Q  457 ttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattc 556  Q
    |||||| |||||||||||||||  ||||||||||| | || |||||||| || ||||| |||||||||||| ||||  |      |||||||||||||||    
T  6910810 ttttctccgtgatttcatcatctaagtgtggtggtatattattcgtcgttttgtgcgatgttgtttgattttccgttat------gtgttcatttgattc 6910717  T
Q  557 atattgaa 564  Q
    ||||||||    
T  6910716 atattgaa 6910709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 437 - 505
Target Start/End: Original strand, 30829921 - 30829989
Alignment:
Q  437 ttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgt 505  Q
    |||| ||||||||||||||| |||| |||||||||||||||| |||||||  | ||||||||| |||||    
T  30829921 ttttgacatagatctaggttgtttcatcgtgatttcatcatctgagtgtgacgttgtgttgtttgtcgt 30829989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 493 - 561
Target Start/End: Complemental strand, 24396585 - 24396513
Alignment:
Q  493 tgttgttcgtcgtcttatgcgacgttgtttgatttcccgta----ttgttgcggtgttcatttgattcatatt 561  Q
    ||||||| |||||||| |||||||||||||||||| ||||     ||||||||||||||||||||||| ||||    
T  24396585 tgttgtttgtcgtcttgtgcgacgttgtttgattttccgtccgtcttgttgcggtgttcatttgattcttatt 24396513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 462 - 564
Target Start/End: Original strand, 53508179 - 53508282
Alignment:
Q  462 ttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgattt-cccgtattgttgcggtgttcatttgattcatat 560  Q
    ||||||||||| || || || || || | |||||||||||||||||| | ||| |||||||||||| ||||| ||||||| |||||| |||| ||| |||    
T  53508179 ttcgtgatttcgtcgtctgaatgcggcgttgtgttgttcgtcgtcttgtacgatgttgtttgatttccccgttttgttgcagtgttcgtttggttcctat 53508278  T
Q  561 tgaa 564  Q
    ||||    
T  53508279 tgaa 53508282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 466 - 564
Target Start/End: Original strand, 4821766 - 4821863
Alignment:
Q  466 tgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||| ||  |||| |||| ||| |||||||||||||| |  ||| |||||||||||  ||| |||||||||||||| |||| |||||||||||    
T  4821766 tgatttcatcgtctaagtgcggtgttgtattgttcgtcgtcttgtt-gacattgtttgattttgcgtcttgttgcggtgttcgtttggttcatattgaa 4821863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 493 - 527
Target Start/End: Complemental strand, 25461104 - 25461070
Alignment:
Q  493 tgttgttcgtcgtcttatgcgacgttgtttgattt 527  Q
    |||||||||||||||||||||||||||||||||||    
T  25461104 tgttgttcgtcgtcttatgcgacgttgtttgattt 25461070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 564
Target Start/End: Original strand, 29922011 - 29922113
Alignment:
Q  462 ttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    ||||||||||| || || |||||||| | |||||||||   |||||| || ||||| |||||||||| ||| ||||||||||||  ||||  ||||||||    
T  29922011 ttcgtgatttcgtcgtctgagtgtggcgttgtgttgtttcccgtcttgtgtgacgtcgtttgatttcgcgtcttgttgcggtgtatatttcgttcatatt 29922110  T
Q  562 gaa 564  Q
    |||    
T  29922111 gaa 29922113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 462 - 564
Target Start/End: Original strand, 29971164 - 29971266
Alignment:
Q  462 ttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    ||||||||||| || || |||||||| | |||||||||   |||||| || ||||| |||||||||| ||| ||||||||||||  ||||  ||||||||    
T  29971164 ttcgtgatttcgtcgtctgagtgtggcgttgtgttgtttcccgtcttgtgtgacgtcgtttgatttcgcgtcttgttgcggtgtatatttcgttcatatt 29971263  T
Q  562 gaa 564  Q
    |||    
T  29971264 gaa 29971266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 564
Target Start/End: Complemental strand, 46322427 - 46322357
Alignment:
Q  494 gttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||| || | ||  |||||||| ||| |||| ||||||||||||||||||| |||||||||||    
T  46322427 gttgttcgtcgttttgtacggtgttgtttgtttttccgtcttgttgcggtgttcatttggttcatattgaa 46322357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 389 - 462
Target Start/End: Complemental strand, 6913321 - 6913249
Alignment:
Q  389 atcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttct 462  Q
    ||||||||| ||||||| |||||||||  |||||| || ||| |||||||| |||||||||| |||||||||||    
T  6913321 atcaccccttttcatctctttctctatgtttcaatctagataggtgatttt-cacatagatcgaggttttttct 6913249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 491 - 564
Target Start/End: Original strand, 35175387 - 35175460
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||| ||||||| |||  ||||||||||||||  || |||||||||||||| |||| || ||||||||    
T  35175387 tgtgttgttcatcgtcttgtgcagcgttgtttgatttcatgtcttgttgcggtgttcgtttggtttatattgaa 35175460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 564
Target Start/End: Original strand, 32246432 - 32246503
Alignment:
Q  493 tgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||| ||||| || ||||||||||||||||| | ||| |||||||| |||||| ||| ||| |||||||    
T  32246432 tgttgtttgtcgttttgtgcgacgttgtttgattccgcgtcttgttgcgctgttcacttggttcctattgaa 32246503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 462 - 528
Target Start/End: Original strand, 51487060 - 51487126
Alignment:
Q  462 ttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttc 528  Q
    ||||||||||| |||||  |||| |  | |||||||||||||||||| |||| ||||||||||||||    
T  51487060 ttcgtgatttcgtcatcttagtgggacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttc 51487126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 552
Target Start/End: Original strand, 3606759 - 3606820
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttg 552  Q
    |||||||||||||||||| || | |||||| |||| |||||| |||||| ||||||| ||||    
T  3606759 tgtgttgttcgtcgtcttgtgtggcgttgtatgatatcccgtcttgttgtggtgttcgtttg 3606820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 528
Target Start/End: Original strand, 7546593 - 7546630
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttc 528  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  7546593 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttc 7546630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 492 - 556
Target Start/End: Complemental strand, 30293576 - 30293512
Alignment:
Q  492 gtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattc 556  Q
    |||||||||||||||||  |||| |||||||||||| || | ||||||  || ||||||||||||    
T  30293576 gtgttgttcgtcgtcttgcgcgatgttgtttgattttccatcttgttgtagtattcatttgattc 30293512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 2e-57; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 31235969 - 31235792
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||| ||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||| ||| ||||||||| |||||  ||||||    
T  31235969 aaatctcccctcttcatctttttctctctatttcaatctaaataagtgatttttcacatagatctaggttttctctacgtgatttcgtcatctaagtgtg 31235870  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    | ||| |||||||||||||||| |||  |||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  31235869 gcggtttgttgttcgtcgtcttgtgcagcgttgtttgatttctcgtatcgttgcggtgttcatttgattcatattgaa 31235792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 381 - 564
Target Start/End: Complemental strand, 35667414 - 35667232
Alignment:
Q  381 gacttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccg 480  Q
    ||||||||||||||| ||||||| ||||||||| || |||||| ||||||||||||||| |||||||||||||||||||||||  |||||||||||||      
T  35667414 gacttaaaatcacccttcttcatatttttctctctatttcaatctaaataagtgatttt-cacatagatctaggttttttctttttgatttcatcatcta 35667316  T
Q  481 agtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||||| |||||||||||||||| |||| |||| |||||||| |||| || ||||||||||||||||||||||||||||    
T  35667315 agtgtggtggtttgttgttcgtcgtcttgtgcggcgttttttgattttccgtcttcttgcggtgttcatttgattcatattgaa 35667232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 387 - 567
Target Start/End: Complemental strand, 23425548 - 23425369
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||   ||||||    
T  23425548 aaatcacccctcttcatctttttctctatatttcaatctaaataagtgattttt-acatagatctaggttttttctttgtgatttcatcatttaagtgtg 23425450  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagat 567  Q
    ||||| |||||||||||||||| ||||  | ||||||||||||||| || ||||||||||||| ||||| || ||||||||    
T  23425449 gtggtttgttgttcgtcgtcttgtgcggtgctgtttgatttcccgtcttcttgcggtgttcatctgatttattttgaagat 23425369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 387 - 567
Target Start/End: Original strand, 48207802 - 48207981
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    |||||||||||||||||||||||||| ||| |||||| ||||||||||||||| |||||||||||| |||||||||| ||||||||||||||  ||||||    
T  48207802 aaatcacccctcttcatctttttctcaatatttcaatctaaataagtgatttt-cacatagatctatgttttttctttgtgatttcatcatctaagtgtg 48207900  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagat 567  Q
    ||| | |||||||||||||||| |||  || ||||||||||||||| || |||||||||||||||||||||| ||||||||    
T  48207901 gtgatttgttgttcgtcgtcttgtgctgcgctgtttgatttcccgtcttcttgcggtgttcatttgattcattttgaagat 48207981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 6001921 - 6002098
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||||| ||||||||||||||||  || || ||| ||||||||||||||||||||||||| |||||||| ||| ||||||||| ||||| |||||||    
T  6001921 aaatcacccatcttcatctttttctccctattttaatctaaataagtgatttttcacatagatttaggttttctctacgtgatttcgtcatctgagtgtg 6002020  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    | ||| |||||||||||||||| |||| |||||||||||||| ||||| || ||||||||||||||||||||||||||    
T  6002021 gcggtttgttgttcgtcgtcttgtgcggcgttgtttgatttctcgtatcgtcgcggtgttcatttgattcatattgaa 6002098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 387 - 567
Target Start/End: Complemental strand, 45199208 - 45199029
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||||| |||||||||||||||||||| || ||| ||||||||||||||| || ||||||||| |||||||||| ||||||||||||||  ||||||    
T  45199208 aaatcacccatcttcatctttttctctatattttaatttaaataagtgatttt-catatagatctaagttttttctttgtgatttcatcatctaagtgtg 45199110  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagat 567  Q
    ||||| ||||||||||||| || |||| || ||||||||||||||| || ||||||||||||| |||||||| ||||||||    
T  45199109 gtggtttgttgttcgtcgttttgtgcggcgctgtttgatttcccgtcttcttgcggtgttcatctgattcattttgaagat 45199029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 20116483 - 20116659
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||||| ||||||||||||||| | || |||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||     ||||    
T  20116483 aaatcacccttcttcatctttttctatctatttcaatctaaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatatacatgtg 20116581  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    || || |||||||||||||||| |||| ||||||||||||| |||| || ||||||||||||||||||||||||||||    
T  20116582 gttgtttgttgttcgtcgtcttgtgcgtcgttgtttgatttaccgtcttcttgcggtgttcatttgattcatattgaa 20116659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 387 - 567
Target Start/End: Complemental strand, 42067237 - 42067058
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    |||||||| ||||||||||| || |||||| |||||| ||||||||||||||| ||||||||| ||| |||||||||  |||||||||||||  ||||||    
T  42067237 aaatcacctctcttcatcttgttatctatatttcaatctaaataagtgatttt-cacatagatatagattttttctttctgatttcatcatctaagtgtg 42067139  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagat 567  Q
     |||| |||||||||||||||| |||| || ||||||||||| ||| || |||||||||||||||||||||||||||||||    
T  42067138 ttggtttgttgttcgtcgtcttgtgcggcgctgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaagat 42067058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 398 - 564
Target Start/End: Complemental strand, 1448995 - 1448830
Alignment:
Q  398 cttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttg 497  Q
    |||||||| ||||||| || |||||| ||||||||||||||| ||||||||||||| |||||| || ||||||||||||||  |||||||| || |||||    
T  1448995 cttcatctctttctctctatttcaatctaaataagtgatttt-cacatagatctagattttttatttgtgatttcatcatctaagtgtggttgtttgttg 1448897  T
Q  498 ttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||| || |||| |||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  1448896 ttcgtcgtattgtgcggcgttgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaa 1448830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 22928047 - 22927870
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgt 485  Q
    ||||||||||| ||||||||||||||| || |||||| ||||||||||| ||| |||| |||||||| |||||| ||| ||||||||||||||  |||||    
T  22928047 aaatcaccccttttcatctttttctctctatttcaatctaaataagtgacttt-cacacagatctagttttttttctttgtgatttcatcatctaagtgt 22927949  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||| |||||||||||||||| |||| ||||||||| |||||||| || ||||||||||||||| |||| |||||||    
T  22927948 ggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattcctattgaa 22927870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 387 - 561
Target Start/End: Original strand, 46821914 - 46822089
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgagtg 484  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||| ||||||  ||| || |||||||||||  |||     
T  46821914 aaatcacccctcttcatctttttctctttatttcaatctaaataagtgatttt-cacatagatctagattttttttctttgtaatttcatcatctaagta 46822012  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    ||||| | ||||||||||| |||| |||| |||||||||||||||||| ||  ||||||||||||||||||||||||    
T  46822013 tggtgatttgttgttcgtcttcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatatt 46822089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 385 - 564
Target Start/End: Complemental strand, 35496354 - 35496175
Alignment:
Q  385 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagt 483  Q
    ||||||||||  ||||||||||||||||| || |||||| ||| ||||||||||| |||||||||||||||||||| ||| ||||||||||||||  |||    
T  35496354 taaaatcaccaatcttcatctttttctctctatttcaatctaattaagtgatttt-cacatagatctaggtttttttctttgtgatttcatcatctaagt 35496256  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||| |||||||| ||||||| |||| |||||||| |||||||||  |  |||||||||||||||||| ||||||||    
T  35496255 gtggtggtttgttgttcatcgtcttgtgcggcgttgtttcatttcccgtcctcgtgcggtgttcatttgatttatattgaa 35496175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 385 - 556
Target Start/End: Complemental strand, 1485435 - 1485265
Alignment:
Q  385 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtg 484  Q
    ||||||||||| ||||||||||||||||| || |||||| ||||||||||| ||| ||||||||||||| ||||||||| ||||||||||||||  ||||    
T  1485435 taaaatcacccgtcttcatctttttctctctatttcaatctaaataagtgacttt-cacatagatctagattttttctttgtgatttcatcatctaagtg 1485337  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattc 556  Q
    ||||||| |||||||||||||||| |||  ||||||||| |||||| | || ||||||| ||||||| ||||    
T  1485336 tggtggtttgttgttcgtcgtcttgtgcagcgttgtttgttttcccatcttcttgcggtattcattttattc 1485265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 26492265 - 26492442
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgt 485  Q
    |||| |||||||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||| |||||| ||| ||||||||||||||  |||||    
T  26492265 aaataacccctcttcatctttttctctctatttcaatttaaataagtgatttt-cacatagatctagttttttttctttgtgatttcatcatctaagtgt 26492363  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||| |||||| || |||||| |||  |||||||||||||||||| ||   ||| ||||||||||||||||||||||    
T  26492364 ggtggtttgttgtccgccgtcttgtgctgcgttgtttgatttcccgtcttcgcgcgatgttcatttgattcatattgaa 26492442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 26583614 - 26583791
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgt 485  Q
    ||||||||||||||||||||||| ||| || |||||| ||||||||||||||| || ||| ||||||||||||| ||| ||||||||||||||  |||||    
T  26583614 aaatcacccctcttcatctttttatctctatttcaatctaaataagtgatttt-catatatatctaggtttttttctttgtgatttcatcatctaagtgt 26583712  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||| |||||||| ||||||| |||| ||||||||||||||| || ||  |||  ||||||||||||||||||||||    
T  26583713 ggtggtttgttgttcatcgtcttgtgcggcgttgtttgatttccagtcttcgtgcaatgttcatttgattcatattgaa 26583791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 32522108 - 32521927
Alignment:
Q  387 aaatcacccctcttcatcttttt-----ctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccga 481  Q
    ||||||||| |||||||||||||     |||| || |||||| ||||||||||||||| ||||||||| || ||||||||||||| |||||  |||| ||    
T  32522108 aaatcacccatcttcatcttttttttctctctctatttcaatttaaataagtgatttt-cacatagatttatgttttttcttcgttatttcgccatctga 32522010  T
Q  482 gtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||| |||||||||||||| |||| |||| ||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  32522009 gtgtggttgtgtgttgttcgtcatcttgtgcggcgttgtttgattttccgttttgttgtggtgttcatttgattcatattgaa 32521927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 42311180 - 42311357
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgt 485  Q
    |||||| ||||||||||| |||||||| || |||||| |||||||||||| || |||||||||||||||||||| ||| |||||||||||||   |||||    
T  42311180 aaatcatccctcttcatcattttctctctatttcaatctaaataagtgatatt-cacatagatctaggtttttttctttgtgatttcatcatttaagtgt 42311278  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    || ||| ||||||||||||||||||||  ||||||||||||| |||| ||  |||| ||||||||||||||||||||||    
T  42311279 ggcggtttgttgttcgtcgtcttatgcagcgttgtttgattttccgtcttcgtgcgatgttcatttgattcatattgaa 42311357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 42408262 - 42408439
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgt 485  Q
    |||||| || ||||||||||||||||| || |||||| ||||||| || |||||||||| |||||||||||||| ||| |||||||||||||   |||||    
T  42408262 aaatcatccatcttcatctttttctctttatttcaatctaaataattg-tttttcacatggatctaggtttttttctttgtgatttcatcatttaagtgt 42408360  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||| |||||||||||||||| |||  ||||||||||||| |||| ||  |||||| ||||||||||||||||||||    
T  42408361 ggtggtttgttgttcgtcgtcttgtgcagcgttgtttgattttccgtcttcgtgcggtattcatttgattcatattgaa 42408439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 403 - 561
Target Start/End: Complemental strand, 46818577 - 46818419
Alignment:
Q  403 tctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgt 502  Q
    ||||||||||| |   ||||| |||||||||||||||||||||| || | |||||||||||| ||||||| |||||||||||||| |||| ||||||||     
T  46818577 tctttttctctctcgctcaatctaaataagtgatttttcacataaattttggttttttcttcatgatttcgtcatccgagtgtggcggtgcgttgttcga 46818478  T
Q  503 cgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
      |||| |||| |||||||||||||| |||||||||||||||||||||| |||||||||    
T  46818477 aatcttgtgcggcgttgtttgatttctcgtattgttgcggtgttcatttaattcatatt 46818419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 387 - 567
Target Start/End: Original strand, 21266292 - 21266471
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    |||||||| |||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||||  |||||||  |||||||||||||  ||||||    
T  21266292 aaatcacctctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctagg-gttttctttttgatttcatcatctaagtgtg 21266389  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgac-gttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagat 567  Q
    ||||| |||| ||||||||||| ||||||  || ||| |||| |||| || ||||||||||||| |||||||||||||||||    
T  21266390 gtggtttgttattcgtcgtcttgtgcgacatttttttaattttccgtcttcttgcggtgttcatctgattcatattgaagat 21266471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 381 - 564
Target Start/End: Original strand, 23085414 - 23085598
Alignment:
Q  381 gacttaaaatcacccc-tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatc 478  Q
    ||||| |||||||||| ||||||||||||||| | || |||||| ||||||| ||| ||| |||||||||||||||||||| ||| ||||||| ||||||    
T  23085414 gacttgaaatcaccccctcttcatctttttctttctatttcaatctaaataattgacttt-cacatagatctaggtttttttctttgtgattttatcatc 23085512  T
Q  479 cgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
      ||||||||||| |||||||||||||| | |||| | ||||||| |||||||| || ||||||||||||||| ||||||||||||    
T  23085513 taagtgtggtggtttgttgttcgtcgtcatgtgcggcattgtttgctttcccgtcttcttgcggtgttcattttattcatattgaa 23085598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 394 - 564
Target Start/End: Original strand, 46338960 - 46339131
Alignment:
Q  394 ccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgagtgtggtggt 491  Q
    |||||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||| ||||||  ||| || ||||||||||   ||||||||| |    
T  46338960 ccctcttcatctttttctctttatttcaatgtaaataagtgatttt-cacatagatctagcttttttttctttgtaatttcatcatttaagtgtggtgat 46339058  T
Q  492 gtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
     |||||||||||||||| |||| ||||||||||||| |||| ||  | |||||||||||||||||||||||||    
T  46339059 ttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtacggtgttcatttgattcatattgaa 46339131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 437 - 564
Target Start/End: Original strand, 17611075 - 17611202
Alignment:
Q  437 ttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattg 536  Q
    |||||||||| | |||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||  |||||||||||| | || |||    
T  17611075 ttttcacataaaactagattttttcttcgtgatttcgtcatccgagtgtggtggtgtgttattcgtcgtcttgtgcggagttgtttgattttctgtcttg 17611174  T
Q  537 ttgcggtgttcatttgattcatattgaa 564  Q
    |||| |||||||||||||||||||||||    
T  17611175 ttgcagtgttcatttgattcatattgaa 17611202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 395 - 564
Target Start/End: Complemental strand, 14628048 - 14627879
Alignment:
Q  395 cctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgtggtggtgt 493  Q
    ||||||||||||||| ||| ||||||||| ||||||||||||||| |||||| || |||||||||| | | ||||||||||||||  ||||||||||| |    
T  14628048 cctcttcatctttttttctctaattcaatctaaataagtgatttt-cacataaatataggtttttttccttgtgatttcatcatctaagtgtggtggttt 14627950  T
Q  494 gttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||| || |||| |||||||||||||| ||| ||  | ||||||| |||||||||||||||||    
T  14627949 gttgttcgtcgtattgtgcggcgttgtttgatttctcgtcttagtacggtgtttatttgattcatattgaa 14627879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 418 - 564
Target Start/End: Original strand, 23786508 - 23786652
Alignment:
Q  418 ttcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgt 517  Q
    |||||| ||||||||||||||| |||| | |||||  ||||||||| |||||| |||||||  ||||||||||| |||||||||||||||| |||| |||    
T  23786508 ttcaatctaaataagtgatttt-cacacatatctaaattttttctttgtgatt-catcatctaagtgtggtggtttgttgttcgtcgtcttctgcggcgt 23786605  T
Q  518 tgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||||| ||| || ||||||||||||||||||||||||||||    
T  23786606 tgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaa 23786652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 428 - 564
Target Start/End: Original strand, 6558817 - 6558954
Alignment:
Q  428 ataagtgatttttcacatagatctaggttttt--tcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgat 525  Q
    |||||||||||| ||||||||| |||||||||  |||| ||||||||||||||  ||||||||||| |||||||||||||||| | |||||||||| |||    
T  6558817 ataagtgatttt-cacatagatttaggtttttcttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtacgacgttgttcgat 6558915  T
Q  526 ttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||| ||  ||||||||||||||||||||| |||||    
T  6558916 ttcccgtcttcgtgcggtgttcatttgattcattttgaa 6558954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 391 - 564
Target Start/End: Complemental strand, 2843400 - 2843241
Alignment:
Q  391 cacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtgg 490  Q
    ||||||||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||||||||| || || |||||||||||  |||||||||     
T  2843400 cacccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctaggtttttt-tttgtaatttcatcatctaagtgtggtga 2843303  T
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    | ||||||||||            |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  2843302 tttgttgttcgt------------cgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaa 2843241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 397 - 497
Target Start/End: Original strand, 36143776 - 36143875
Alignment:
Q  397 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgtt 496  Q
    ||||||||||||||||| ||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||| || || |||||||||||||||||    
T  36143776 tcttcatctttttctctctaattcaatctaaataagtg-tttttcacgtagatctaggttttttcttcgtgatttcgtcgtctgagtgtggtggtgtgtt 36143874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 426 - 564
Target Start/End: Complemental strand, 17223136 - 17223000
Alignment:
Q  426 aaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgat 525  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||  ||||||||| | |||||||| ||||||| |||| ||| |||||||    
T  17223136 aaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtgatttgttgttcatcgtcttgtgcggcgtggtttgat 17223038  T
Q  526 ttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    || || | ||  ||| |||||||||||||||||||||||    
T  17223037 tttccttcttcatgc-gtgttcatttgattcatattgaa 17223000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 430 - 564
Target Start/End: Original strand, 34773653 - 34773788
Alignment:
Q  430 aagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgattt 527  Q
    ||||||||||| ||||||||||| |||||||  ||| || |||| ||||||  ||||||||| | |||| |||||||||||||||| |||||||||||||    
T  34773653 aagtgattttt-acatagatctaagttttttttctttgtaatttgatcatctaagtgtggtgatttgttattcgtcgtcttatgcggcgttgtttgattt 34773751  T
Q  528 cccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    || || || ||||||||||||||||||||||||||||    
T  34773752 cctgtcttcttgcggtgttcatttgattcatattgaa 34773788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 437 - 557
Target Start/End: Complemental strand, 17499786 - 17499666
Alignment:
Q  437 ttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattg 536  Q
    |||||||| |||||||||||||||| | ||||||||||||||  ||||| ||||||| ||||||  |||||| |||||| ||||||||||| |||| |||    
T  17499786 ttttcacaaagatctaggttttttcattgtgatttcatcatctaagtgtagtggtgtattgttcaccgtcttgtgcgacattgtttgattttccgtcttg 17499687  T
Q  537 ttgcggtgttcatttgattca 557  Q
    ||||||| |||||||||||||    
T  17499686 ttgcggtattcatttgattca 17499666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 437 - 557
Target Start/End: Original strand, 17553428 - 17553548
Alignment:
Q  437 ttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattg 536  Q
    |||||||| |||||||||||||||| | ||||||||||||||  ||||| ||||||| ||||||  |||||| |||||| ||||||||||| |||| |||    
T  17553428 ttttcacaaagatctaggttttttcattgtgatttcatcatctaagtgtagtggtgtattgttcaccgtcttgtgcgacattgtttgattttccgtcttg 17553527  T
Q  537 ttgcggtgttcatttgattca 557  Q
    ||||||| |||||||||||||    
T  17553528 ttgcggtattcatttgattca 17553548  T

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Target: chr7; HSP #33
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 433869 - 433691
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctag-gttttttcttcgtgatttcatcatccgagtgt 485  Q
    |||||| |||| ||||||||||||||| || |||||| ||||||| |||  ||||||||||||||||  ||||||||| ||||||||||||||  |||||    
T  433869 aaatcatcccttttcatctttttctctctatttcaatctaaataaatga-ctttcacatagatctagatttttttctttgtgatttcatcatctaagtgt 433771  T
Q  486 -ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
     |||||| |||||||||| ||||| |||  ||||||||| |||| ||| || || | |||||||||| |||| |||||||    
T  433770 gggtggtttgttgttcgttgtcttgtgcagcgttgtttgctttctcgtcttcttacagtgttcattttattcctattgaa 433691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 462 - 564
Target Start/End: Complemental strand, 24069528 - 24069426
Alignment:
Q  462 ttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    |||||||||||||| || ||||| || | |||||||||||| ||||| |||| |||| ||||||||  |||||||||||||||||| |||||||||||||    
T  24069528 ttcgtgatttcatcgtctgagtgcggcgttgtgttgttcgttgtcttgtgcggcgttttttgatttggcgtattgttgcggtgttcgtttgattcatatt 24069429  T
Q  562 gaa 564  Q
    |||    
T  24069428 gaa 24069426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 385 - 561
Target Start/End: Original strand, 35261195 - 35261372
Alignment:
Q  385 taaaatcacccctcttcatctttttctc-tataattcaatataaataagtgatttttcacatagatctaggtttt--ttcttcgtgatttcatcatccga 481  Q
    ||||||||||| |||||||||||||||  |  | ||||||  |||||||||||||| |||||| || ||| ||||  |||||||||||||| |||||| |    
T  35261195 taaaatcacccatcttcatctttttctagtccatttcaatccaaataagtgatttt-cacataaatttagattttttttcttcgtgatttcgtcatccaa 35261293  T
Q  482 gtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    ||||||| ||||||||||||||||||  |||  | || |||||||| |||| ||  ||| ||||||||||||||||||||    
T  35261294 gtgtggttgtgtgttgttcgtcgtctcctgcagcattatttgattttccgtctttgtgc-gtgttcatttgattcatatt 35261372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 493 - 564
Target Start/End: Original strand, 32684674 - 32684745
Alignment:
Q  493 tgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||||||| |||| |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  32684674 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaa 32684745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 455 - 564
Target Start/End: Complemental strand, 969588 - 969479
Alignment:
Q  455 ttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgat 554  Q
    ||||||||||||||||||||| |  || ||||| | |||||||||||||||||| |||| |||||||||||||  ||| || ||||||||||  |||| |    
T  969588 ttttttcttcgtgatttcatcgtttgaatgtggcgttgtgttgttcgtcgtcttttgcggcgttgtttgattttgcgtcttattgcggtgtttgtttggt 969489  T
Q  555 tcatattgaa 564  Q
    ||||||||||    
T  969488 tcatattgaa 969479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 396 - 548
Target Start/End: Original strand, 20083240 - 20083399
Alignment:
Q  396 ctcttcatctttttctctataattcaatataaataagtgattttt-cacatagatctaggtttttt-cttcgtgatttcatcatccgagtgtggtggtgt 493  Q
    |||||||||||||||| | || |||||| ||||||||  |||||  || ||| ||||||||||||| |||| |||||||  ||||  |||||| ||||||    
T  20083240 ctcttcatctttttctttctatttcaatctaaataagcaattttcacatatatatctaggtttttttcttcatgatttcgacatctaagtgtgatggtgt 20083339  T
Q  494 gttg-----ttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttca 548  Q
    ||||     || |||||||| || |||||||||||||||||||| |||||||||||||||    
T  20083340 gttggttaatttgtcgtcttgtgagacgttgtttgatttcccgtcttgttgcggtgttca 20083399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 382 - 475
Target Start/End: Original strand, 3860847 - 3860938
Alignment:
Q  382 acttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatc 475  Q
    |||| |||||||  ||||| |||||||||||| |  |||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||    
T  3860847 acttgaaatcacatctctttatctttttctctttgtttcaatataaataagtga-ttttcacatagatcttgg-tttttcttcgtgatttcatc 3860938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 455 - 528
Target Start/End: Complemental strand, 44311932 - 44311859
Alignment:
Q  455 ttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttc 528  Q
    ||||||||||||||||||||| || ||||| |  | ||| |||||||||||||| |||||||||||||||||||    
T  44311932 ttttttcttcgtgatttcatcgtctgagtgcgtcgttgtattgttcgtcgtcttctgcgacgttgtttgatttc 44311859  T

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Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 457 - 528
Target Start/End: Original strand, 3394426 - 3394497
Alignment:
Q  457 ttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttc 528  Q
    ||||||||||||||||||| || ||||| |||| |||||||||||||||||| || |  |||||||||||||    
T  3394426 ttttcttcgtgatttcatcgtctgagtgcggtgttgtgttgttcgtcgtcttgtgtggtgttgtttgatttc 3394497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 491 - 565
Target Start/End: Complemental strand, 3224515 - 3224441
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaag 565  Q
    |||||||||||| ||||| |||||| || ||||||||| ||| |||||||| ||||| |||| ||||||||||||    
T  3224515 tgtgttgttcgtagtcttgtgcgacattatttgatttcacgttttgttgcgatgttcgtttggttcatattgaag 3224441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 32684595 - 32684656
Alignment:
Q  397 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttt 459  Q
    |||||||| |||||||| || |||||| ||||||||||| |||||||||||||||||||||||    
T  32684595 tcttcatcgttttctctctatttcaatctaaataagtga-ttttcacatagatctaggttttt 32684656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 397 - 530
Target Start/End: Complemental strand, 1100932 - 1100801
Alignment:
Q  397 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgtt 496  Q
    ||||||||||||||||| || |||||| | || |||||||||||  |||| ||||| |||||||||||||||||||||| |  || |  || | | ||||    
T  1100932 tcttcatctttttctctctatttcaattttaacaagtgattttt-gcatatatcta-gttttttcttcgtgatttcatcgtatgaatccggcgatatgtt 1100835  T
Q  497 gttcgtcgtcttatgcgacgttgtttgatttccc 530  Q
    |||| ||||||| ||||  |||||||||||||||    
T  1100834 gttcatcgtcttgtgcggtgttgtttgatttccc 1100801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 491 - 564
Target Start/End: Complemental strand, 41553539 - 41553466
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||||||||| || |||||| ||||||||| ||| |||||  ||||||| |||| |||||||||||    
T  41553539 tgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaa 41553466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 491 - 564
Target Start/End: Complemental strand, 41553884 - 41553811
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||||||||| || |||||| ||||||||| ||| |||||  ||||||| |||| |||||||||||    
T  41553884 tgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaa 41553811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 491 - 564
Target Start/End: Complemental strand, 41554229 - 41554156
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||||||||| || |||||| ||||||||| ||| |||||  ||||||| |||| |||||||||||    
T  41554229 tgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaa 41554156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 496 - 564
Target Start/End: Original strand, 19560007 - 19560075
Alignment:
Q  496 tgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||||||| |||| |||||||||||||| | | || |||  |||||||||||||||||||||||    
T  19560007 tgttcgtcgtcttgtgcggcgttgtttgatttctcattttcttgatgtgttcatttgattcatattgaa 19560075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 418 - 518
Target Start/End: Original strand, 24770162 - 24770262
Alignment:
Q  418 ttcaatataaataagtgatttttcacatagatctaggttttttcttc-gtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacg 516  Q
    |||||| |||||||||| |||| |||||| ||| |  |||||||||  |||||||| || ||  |||| |||| ||||||||||||||||||||||||||    
T  24770162 ttcaatctaaataagtggtttt-cacatatatcaaatttttttcttttgtgatttcgtcgtctaagtgcggtgttgtgttgttcgtcgtcttatgcgacg 24770260  T
Q  517 tt 518  Q
    ||    
T  24770261 tt 24770262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 530
Target Start/End: Complemental strand, 7640881 - 7640806
Alignment:
Q  455 ttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttccc 530  Q
    |||||| || ||||||||||||||  ||||||||||| ||||| |||||| ||| || | ||||||||| ||||||    
T  7640881 ttttttttttgtgatttcatcatctaagtgtggtggtttgttgctcgtcgccttgtgaggcgttgtttgctttccc 7640806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 472
Target Start/End: Complemental strand, 43369904 - 43369858
Alignment:
Q  425 taaataagtgatttttcacatagatctaggttttttcttcgtgatttc 472  Q
    ||||||||||||||| ||||||||| || |||||||||||||||||||    
T  43369904 taaataagtgatttt-cacatagatataagttttttcttcgtgatttc 43369858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 418 - 528
Target Start/End: Complemental strand, 1749327 - 1749219
Alignment:
Q  418 ttcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgt 517  Q
    |||||| ||||||||||||||| |||||| ||| || |||| | ||||||||||| || ||  |||| |  | |||||||||||||||||| |||| | |    
T  1749327 ttcaatctaaataagtgatttt-cacatacatcaagtttttct-ttcgtgatttcgtcgtcttagtgcgacgttgtgttgttcgtcgtcttgtgcggcat 1749230  T
Q  518 tgtttgatttc 528  Q
    |||||||||||    
T  1749229 tgtttgatttc 1749219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 491 - 560
Target Start/End: Complemental strand, 35665241 - 35665171
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgt-attgttgcggtgttcatttgattcatat 560  Q
    |||||| |||||||| || ||||||||||||||||||  |||  |||||||||| ||| ||||||||||||    
T  35665241 tgtgttattcgtcgttttgtgcgacgttgtttgatttggcgtctttgttgcggtattcgtttgattcatat 35665171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 469
Target Start/End: Complemental strand, 1097770 - 1097698
Alignment:
Q  397 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctag-gttttttcttcgtgat 469  Q
    ||||||||||||| | | || |||||| |||||||||| ||||| ||||||||||||  |||||||||||||||    
T  1097770 tcttcatctttttttatctatttcaatttaaataagtg-ttttttacatagatctagttttttttcttcgtgat 1097698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 528
Target Start/End: Original strand, 22742926 - 22742963
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttc 528  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  22742926 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttc 22742963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 528
Target Start/End: Complemental strand, 24350946 - 24350909
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttc 528  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  24350946 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttc 24350909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 564
Target Start/End: Original strand, 27997077 - 27997150
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||||||| |||| ||| || |||||| ||||  | | ||||||| |||||| ||||||||||||||||    
T  27997077 tgtgttgttcgtcatcttgtgcaacattgttttattttgcatcttgttgcagtgttcgtttgattcatattgaa 27997150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 491 - 528
Target Start/End: Original strand, 28476209 - 28476246
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttc 528  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  28476209 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttc 28476246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 406 - 474
Target Start/End: Original strand, 7740559 - 7740626
Alignment:
Q  406 ttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcat 474  Q
    |||| |||||| |||||| ||||||| | ||||| ||||||||| ||| ||||||||| ||||||||||    
T  7740559 ttttttctatatttcaatttaaataaattatttt-cacatagatttagattttttctttgtgatttcat 7740626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 516 - 552
Target Start/End: Original strand, 36143878 - 36143914
Alignment:
Q  516 gttgtttgatttcccgtattgttgcggtgttcatttg 552  Q
    |||||||||||| |||| |||||||||||||||||||    
T  36143878 gttgtttgattttccgtcttgttgcggtgttcatttg 36143914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 109; Significance: 2e-54; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 387 - 567
Target Start/End: Original strand, 32913146 - 32913325
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    |||||||||||||| ||| ||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||  ||||||    
T  32913146 aaatcacccctcttgatccttttctctatatttcaatttaaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtg 32913244  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagat 567  Q
    ||||| |||||||||||||||| |||| || |||||||||| |||| || || |||||||||| |||||||||||||||||    
T  32913245 gtggtttgttgttcgtcgtcttgtgcggcgctgtttgattttccgtcttcttacggtgttcatctgattcatattgaagat 32913325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 397 - 564
Target Start/End: Original strand, 8805781 - 8805947
Alignment:
Q  397 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgtt 496  Q
    ||||||| ||||||||| || |||||| ||||||||||||||| ||||| ||||||||||||||||| |||||||||||||| |||||||||||| ||||    
T  8805781 tcttcatatttttctctttatttcaatttaaataagtgatttt-cacatggatctaggttttttctttgtgatttcatcatctgagtgtggtggtttgtt 8805879  T
Q  497 gttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||| ||||||||||||||||||||||| ||  || ||||||||||||||||||||||||    
T  8805880 gttcgtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgtggtgttcatttgattcatattgaa 8805947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 387 - 567
Target Start/End: Complemental strand, 21570585 - 21570404
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttc--gtgatttcatcatccgagtg 484  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||| |||||| ||   ||||||||||||||  ||||    
T  21570585 aaatcacccctcttcatctttttctctatatttcaatctaaataagtgatttt-cacatagatctagattttttttttttgtgatttcatcatctaagtg 21570487  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagat 567  Q
    ||||||| |||||||||||||||| || ||||||||||  |||||||| || | |||||||||||||||||||||||||||||    
T  21570486 tggtggtttgttgttcgtcgtcttgtgtgacgttgtttagtttcccgtcttctcgcggtgttcatttgattcatattgaagat 21570404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 459451 - 459274
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgt 485  Q
    |||||||||||||||||| |||||||| || |||| | |||||||| |||||| ||||||||| |||||||||| |||||||||||| ||||| ||||||    
T  459451 aaatcacccctcttcatccttttctctctatttcattttaaataagcgatttt-cacatagatataggtttttttcttcgtgatttcgtcatctgagtgt 459353  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
     |||||||| ||||||||||||| | |||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  459352 cgtggtgtgctgttcgtcgtcttgtacgacgttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaa 459274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 389 - 567
Target Start/End: Original strand, 4192745 - 4192922
Alignment:
Q  389 atcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggt 488  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||| || ||||||||||||| ||||||||||||||  ||||||||    
T  4192745 atcacccctcttcatctttttctctatatttcaatctaaataagtgatttt-cacatatatttaggttttttctttgtgatttcatcatctaagtgtggt 4192843  T
Q  489 ggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagat 567  Q
    ||| |||||||||||||||| || |  ||||||||||||||||| || |||| |||||||| |||||||| ||||||||    
T  4192844 ggtttgttgttcgtcgtcttgtgtggtgttgtttgatttcccgtcttcttgcagtgttcatctgattcattttgaagat 4192922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 2808647 - 2808472
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||||||||||||||| ||||||| || |||| | ||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||  ||||||    
T  2808647 aaatcacccctcttcatctatttctctctatttcagtctaaataagtgatttt-cacatagatctaggttttt-ctttgtgatttcatcatctaagtgtg 2808550  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| |||||||||||||||| |||| ||||||||||||| ||||||| ||||| ||||||| ||||||||||||||    
T  2808549 gtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtattcttgcgatgttcatctgattcatattgaa 2808472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 30420581 - 30420759
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgagtg 484  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||||||||||  ||| || |||||||||||  ||||    
T  30420581 aaatcacccctcttcatctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggttttttttctttgtaatttcatcatctaagtg 30420679  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| | |||||||||||||||| |||| ||||||||||||| |||| ||  |||||||||||||||||||||||||||    
T  30420680 tggtgatttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaa 30420759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 6173536 - 6173713
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgt 485  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||  |||||    
T  6173536 aaatcacccctcttcatctttttctctctatttcaatctaaataagtgatttt-cacatagatctaggtttttttctttgtgatttcatcatcgaagtgt 6173634  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||| |||||||||| ||||| || | ||||||||||||| || | ||  |||||||||||||||||||||||||||    
T  6173635 ggtggtttgttgttcgttgtcttgtgtggcgttgtttgattttccatctttgtgcggtgttcatttgattcatattgaa 6173713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 27249328 - 27249151
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgt 485  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||||||| |||||||||||||||||||| ||| || ||||||  |||  |||||    
T  27249328 aaatcacccctcttcatctttttctctttatttcaatctaaataagtgatttt-cacatagatctaggtttttttctttgtaatttcaagatctaagtgt 27249230  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||| | |||||||||||||||| |||| |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  27249229 ggtgatttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaa 27249151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 387 - 556
Target Start/End: Original strand, 41430932 - 41431101
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggt-tttttcttcgtgatttcatcatccgagtgt 485  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||| | |||| |||||||||||||| |||||||| ||||||||||||||  |||||    
T  41430932 aaatcacccctcttcatctttttctctatatttcaatctaaataagtcactttt-acatagatctaggtgtttttctttgtgatttcatcatctaagtgt 41431030  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattc 556  Q
    |||||| |||||||||||||||| |||| ||||||||| |||||||| || ||||||||||||||| ||||    
T  41431031 ggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgcggtgttcattttattc 41431101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 7015887 - 7015711
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    |||||||||||| | |||||||||||| || |||||| ||||||| ||||||| ||||||||| ||||||||||| | ||||||||||||||  ||||||    
T  7015887 aaatcacccctcctaatctttttctctttatttcaatctaaataattgatttt-cacatagatttaggttttttccttgtgatttcatcatctaagtgtg 7015789  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| |||||||||||||||| |||| ||||||||||||| |||| ||  |||||||||||||||||||||||||||    
T  7015788 gtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaa 7015711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 45128108 - 45128285
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgt 485  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||| ||| |||||||||||||||||||| ||| ||||||||||||||  |||||    
T  45128108 aaatcacccctcttcatctttttctctttatttcaatctaaataagtgacttt-cacatagatctaggtttttttctttgtgatttcatcatctaagtgt 45128206  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||| |||||||||||||||| |||| ||||||||| |||| | | || ||||||||||||||| |||| |||||||    
T  45128207 ggtggtttgttgttcgtcgtcttgtgcggcgttgtttgctttctcatcttcttgcggtgttcattttattcctattgaa 45128285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 36233909 - 36234089
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctag----gttttttcttcgtgatttcatcatccgag 482  Q
    ||||||||||||||||||||||||||| || |||||| ||||||||||| |||||||||||||||||     ||||||||| || |||||||||||  ||    
T  36233909 aaatcacccctcttcatctttttctctttatttcaatctaaataagtga-ttttcacatagatctagattttttttttctttgtaatttcatcatctaag 36234007  T
Q  483 tgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||| | | |||||||||||||| |||| |||||||||||||||||| ||  |||||||||||||||||||||||||||    
T  36234008 tgtggtgattttttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaa 36234089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 397 - 564
Target Start/End: Original strand, 34598902 - 34599068
Alignment:
Q  397 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgtt 496  Q
    ||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||| |||||| || ||||||||||||||  ||||||||||| ||||    
T  34598902 tcttcatctttttctctctatttcaatctaaataagtgatttt-cacatagatctagtttttttttttgtgatttcatcatctaagtgtggtggtttgtt 34599000  T
Q  497 gttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||| ||||||| |||| ||||||||||||| || | ||  |||||||||||||||||||||||||||    
T  34599001 gttcatcgtcttgtgcggcgttgtttgattttccatcttcgtgcggtgttcatttgattcatattgaa 34599068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 26025587 - 26025410
Alignment:
Q  387 aaatcacccc-tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgt 485  Q
    |||||||||| ||||||||||||||||| || |||||| |||||||||| |||| ||||||||||||||||||||||| |||||||||||||   |||||    
T  26025587 aaatcaccccatcttcatctttttctctctatttcaatctaaataagtggtttt-cacatagatctaggttttttctttgtgatttcatcatgtaagtgt 26025489  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||| || ||||| |||||||||| |||| |||||||||||||  ||| || |||||||||||||||||||||| |||||    
T  26025488 ggtagtttgttggtcgtcgtcttgtgcggcgttgtttgatttttcgtcttcttgcggtgttcatttgattcatcttgaa 26025410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 385 - 564
Target Start/End: Original strand, 3725083 - 3725261
Alignment:
Q  385 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtg 484  Q
    ||||||||  ||||||||||||||||||| || |||||||||||||||||||||| ||||||||||| | ||||||||| ||||||||||| ||  ||||    
T  3725083 taaaatcattcctcttcatctttttctctctatttcaatataaataagtgatttt-cacatagatcttgattttttctttgtgatttcatcgtctaagtg 3725181  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||| |||||||||| ||||| | || |||||||||||||| ||| ||  || ||||||| ||||||||||||||||    
T  3725182 tggtggtttgttgttcgttgtcttgtacggcgttgtttgatttctcgtctttgtgtggtgttcgtttgattcatattgaa 3725261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 9986524 - 9986342
Alignment:
Q  387 aaatcacccctcttca--tctttttctctataattcaatataaataagtgatttttcacatagatctaggttt----tttcttcgtgatttcatcatccg 480  Q
    |||||| |||||||||  | ||||| ||| ||||||||| ||||||||||||||| |||||||||||||||||    |||||| ||||||||||||||      
T  9986524 aaatcatccctcttcaattttttttatctctaattcaatctaaataagtgatttt-cacatagatctaggtttattttttctttgtgatttcatcatcta 9986426  T
Q  481 agtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||||| |||||||||||||||| |||| ||||||||||||| |||| ||  |||||||||||||||||||||||||||    
T  9986425 agtgtggtggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaa 9986342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 387 - 567
Target Start/End: Original strand, 27477059 - 27477233
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||| | ||||||||||||||||| ||||||||| ||||||||||||||      ||    
T  27477059 aaatcacccctcttcatctttttctctatatttcaatctaaataagt-aattttcacatagatctagattttttctttgtgatttcatcatc------tg 27477151  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtatt-gttgcggtgttcatttgattcatattgaagat 567  Q
    ||||| ||||||| || ||||| |||| || |||||||||| |||| ||  |||||||||||||||||||||||||||||||    
T  27477152 gtggtttgttgtttgtagtcttgtgcggcgctgtttgattttccgtcttctttgcggtgttcatttgattcatattgaagat 27477233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 399 - 564
Target Start/End: Complemental strand, 3270393 - 3270229
Alignment:
Q  399 ttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgt 498  Q
    ||||||||||||| | || |||||| ||||||||||||||| |||||||||||||||||||| || ||||||||||||||  ||||||||||  ||||||    
T  3270393 ttcatctttttctttttatttcaatctaaataagtgatttt-cacatagatctaggttttttttttgtgatttcatcatctaagtgtggtggcttgttgt 3270295  T
Q  499 tcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||| || || | ||||||||||||| |||| ||  |||||||||||||||||||||||||||    
T  3270294 tcgtcgttttgtggggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaa 3270229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 387 - 564
Target Start/End: Complemental strand, 8971805 - 8971627
Alignment:
Q  387 aaatcacccctcttcatctttttctctat--aattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtg 484  Q
    |||||| |||||||||||||||||||| |  | || ||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||  |||     
T  8971805 aaatcatccctcttcatctttttctctctttattttaatctaaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatctaagta 8971707  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||| |||||||||||||||| |||  |||||||||||||||| | ||  |||| ||||||||||||||||| ||||    
T  8971706 tggtggtttgttgttcgtcgtcttgtgcagcgttgtttgatttcccatcttcgtgcgatgttcatttgattcataatgaa 8971627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 437 - 567
Target Start/End: Original strand, 17319276 - 17319405
Alignment:
Q  437 ttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattg 536  Q
    |||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||| ||||||| |||  ||||| ||||||| |||| |||    
T  17319276 ttttcacatagatctaggttttttcttcatgatttcgtcatctgagtgtggtggtgtgttgttcttcgtcttgtgcagcgttg-ttgattttccgtcttg 17319374  T
Q  537 ttgcggtgttcatttgattcatattgaagat 567  Q
    ||||||||||||||||| |||||||||||||    
T  17319375 ttgcggtgttcatttgactcatattgaagat 17319405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 406 - 564
Target Start/End: Original strand, 22421659 - 22421816
Alignment:
Q  406 ttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgt 505  Q
    |||||||| || |||||| ||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||  ||||||||||| ||||||||||| |    
T  22421659 ttttctctctatttcaatctaaataagtgacttt-cacatagatctaggttttttctttgtgatttcatcatctaagtgtggtggtttgttgttcgtcat 22421757  T
Q  506 cttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||  |||  ||||||||||||||| | || |||||||||||||||||||| |||||||    
T  22421758 cttgcgcggtgttgtttgatttcccatcttcttgcggtgttcatttgattcgtattgaa 22421816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 397 - 564
Target Start/End: Complemental strand, 39642026 - 39641858
Alignment:
Q  397 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgagtgtggtggtgtg 494  Q
    ||||||||||||||||| || |||||| ||||||| ||||||| ||||||||||||||||||||  |||||||||||||||||| || ||| |||||       
T  39642026 tcttcatctttttctctctatttcaatttaaataaatgatttt-cacatagatctaggttttttttcttcgtgatttcatcatctgaatgttgtggtagt 39641928  T
Q  495 ttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||| |||| |||| | |||||||||||||||| |||||||||| ||||||| ||||||||||||    
T  39641927 ttgttcgtcatcttgtgcgtcattgtttgatttcccgtcttgttgcggtattcatttaattcatattgaa 39641858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 387 - 556
Target Start/End: Complemental strand, 40660106 - 40659940
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||| | |||||||||||||||||||  |||||| ||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||  ||||||    
T  40660106 aaatcacacatcttcatctttttctctat--ttcaatctaaataagtgatttt-cacatagatctagattttttctttgtgatttcatcatctaagtgtg 40660010  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattc 556  Q
    ||| | |||||||||||||||| |||| |||||||||||||||||| ||  | || || |||||||||||    
T  40660009 gtgctttgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtccgatgctcatttgattc 40659940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 386 - 561
Target Start/End: Complemental strand, 32197972 - 32197798
Alignment:
Q  386 aaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgt 485  Q
    |||||||| | ||||||||||||||||| || |||||||||||||| ||||||||  |||| || ||||||||||||| |||||||| |||||  |||||    
T  32197972 aaaatcactcatcttcatctttttctctttatttcaatataaataaatgatttttg-cataaatttaggttttttctttgtgatttcgtcatctaagtgt 32197874  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    ||| ||||||||  | |||||||  ||| | ||||||||||||| || ||||||||||||||||||||||||||||    
T  32197873 ggtagtgtgttgcccatcgtcttgcgcggcattgtttgatttcctgtcttgttgcggtgttcatttgattcatatt 32197798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 387 - 526
Target Start/End: Complemental strand, 40626204 - 40626066
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||||||||||| ||||||||||| || |||||| |||||||| |||||| |||||||||||| |||||||||| ||||||||||||||  ||||||    
T  40626204 aaatcacccctcttcgtctttttctctctatttcaatctaaataagggatttt-cacatagatctacgttttttctttgtgatttcatcatctaagtgtg 40626106  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatt 526  Q
    ||||| |||||||||||||||| ||||  |||||||||||    
T  40626105 gtggtttgttgttcgtcgtcttgtgcggtgttgtttgatt 40626066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 387 - 557
Target Start/End: Original strand, 4228036 - 4228207
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgagtg 484  Q
    ||||||| | ||||||| ||||| ||| || |||||||||||||||||||||  |||||||||||| |||||||  ||| ||||||||||||||  ||||    
T  4228036 aaatcacacatcttcatatttttatctttatttcaatataaataagtgattta-cacatagatctatgttttttttctttgtgatttcatcatctaagtg 4228134  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattca 557  Q
    || |||| |||||||||||||||| |||| ||||||||||||| |||| ||  ||||||||||||||||||||    
T  4228135 tgatggtttgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattca 4228207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 387 - 561
Target Start/End: Original strand, 25086938 - 25087115
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatt---tttcacatagatctaggttttttcttcgtgatttcatcatccgagt 483  Q
    ||||||||||||||||||||||||  | || || ||| || |||||||| |   ||||||||||||||||||||||| ||  |||||||||||||  |||    
T  25086938 aaatcacccctcttcatctttttccatctatttgaatctatataagtgagtgattttcacatagatctaggttttttatttttgatttcatcatctaagt 25087037  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    |||||||| |||||||||||||||| |||||||||||||| |||||| | || |||| ||||||| || |||||||||    
T  25087038 gtggtggtttgttgttcgtcgtcttgtgcgacgttgtttgctttcccttcttcttgcagtgttcaatttattcatatt 25087115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 394 - 564
Target Start/End: Complemental strand, 20047252 - 20047082
Alignment:
Q  394 ccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgtggtggtg 492  Q
    |||| ||||||||||||||| |  |||||| ||||||||||| |||| |||||||| |||||||||| | | ||||||||||||||  |||||||||||     
T  20047252 ccctattcatctttttctctctttttcaatctaaataagtgactttt-acatagatttaggtttttttcattgtgatttcatcatctaagtgtggtggtt 20047154  T
Q  493 tgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||||||| |||| ||||||||||||||  || || || |||||||||||| |||| |||||||    
T  20047153 tgttgttcgtcgtcttgtgcggcgttgtttgatttcatgtcttcttacggtgttcattttattcctattgaa 20047082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 418 - 560
Target Start/End: Original strand, 27949358 - 27949503
Alignment:
Q  418 ttcaatataaataagtgatttttcacatagatctaggttttttcttc----gtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcg 513  Q
    |||||| ||||||||||||||| |||||||||||||||||||| |||    | ||||||||||||  ||||||||||| | |||||||||||||| | ||    
T  27949358 ttcaatctaaataagtgatttt-cacatagatctaggtttttttttctattgcgatttcatcatctaagtgtggtggtttattgttcgtcgtcttgtacg 27949456  T
Q  514 acgttgtttgatttcccgtattgttgcggtgttcatttgattcatat 560  Q
     |||||||||||||||||| || ||||| ||||||||||||||||||    
T  27949457 gcgttgtttgatttcccgtcttcttgcgatgttcatttgattcatat 27949503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 405 - 564
Target Start/End: Original strand, 8308097 - 8308251
Alignment:
Q  405 tttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcg 504  Q
    ||||| ||| ||||||||| |||||  |||||||| |||||||||||||||||||||||||||||||| ||||| || |||||  | |||||||||||||    
T  8308097 tttttttctctaattcaatctaaat--gtgatttt-cacatagatctaggttttttcttcgtgatttcgtcatctgactgtgg-cgcgtgttgttcgtcg 8308192  T
Q  505 tcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||| |||  ||||||||||||| | |||||||||| || ||||||||||||||||||||    
T  8308193 tcttgtgcagcgttgtttgattt-ctgtattgttgcagttttcatttgattcatattgaa 8308251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 425 - 564
Target Start/End: Complemental strand, 3269251 - 3269111
Alignment:
Q  425 taaataagtgatttttcacatagatctaggttttttcttc--gtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgttt 522  Q
    ||||||||||||||| |||||||||||||||||||| ||   ||||||||||||||  ||||||||||  ||||||||||||| || || | ||||||||    
T  3269251 taaataagtgatttt-cacatagatctaggttttttttttttgtgatttcatcatctaagtgtggtggcttgttgttcgtcgttttgtggggcgttgttt 3269153  T
Q  523 gatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| |||| ||  |||||||||||||||||||||||||||    
T  3269152 gattttccgtcttcgtgcggtgttcatttgattcatattgaa 3269111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 425 - 564
Target Start/End: Complemental strand, 3269810 - 3269670
Alignment:
Q  425 taaataagtgatttttcacatagatctaggttttttcttc--gtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgttt 522  Q
    ||||||||||||||| |||||||||||||||||||| ||   ||||||||||||||  ||||||||||  ||||||||||||| || || | ||||||||    
T  3269810 taaataagtgatttt-cacatagatctaggttttttttttttgtgatttcatcatctaagtgtggtggcttgttgttcgtcgttttgtggggcgttgttt 3269712  T
Q  523 gatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||| |||| ||  |||||||||||||||||||||||||||    
T  3269711 gattttccgtcttcgtgcggtgttcatttgattcatattgaa 3269670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 437 - 564
Target Start/End: Complemental strand, 9374683 - 9374556
Alignment:
Q  437 ttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattg 536  Q
    |||||||||| ||||| | ||||||||||||||||| |||||  | ||||||||||||||||||||| |||| |||| | ||||||| ||| |||| |||    
T  9374683 ttttcacataaatctaagatttttcttcgtgatttcgtcatcttattgtggtggtgtgttgttcgtcatcttgtgcgtcattgtttgtttttccgtcttg 9374584  T
Q  537 ttgcggtgttcatttgattcatattgaa 564  Q
    ||| |||||||||||||||||| |||||    
T  9374583 ttgtggtgttcatttgattcattttgaa 9374556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 467 - 564
Target Start/End: Complemental strand, 31580686 - 31580589
Alignment:
Q  467 gatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||||||  ||||||||||| |||||||||||||||| |||| |||||||| ||||||||||||  |||||||||||||||||| ||||||||    
T  31580686 gatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcggcgttgttttatttcccgtattcgtgcggtgttcatttgatttatattgaa 31580589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 387 - 505
Target Start/End: Complemental strand, 32680759 - 32680640
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt--cttcgtgatttcatcatccgagtg 484  Q
    ||||||| | ||||||||||||||||| || |||||| ||||||||||| ||| ||||||||||||||||||||  ||| ||||||||||||||  ||||    
T  32680759 aaatcactcatcttcatctttttctctctatttcaatctaaataagtgacttt-cacatagatctaggttttttttctttgtgatttcatcatctaagtg 32680661  T
Q  485 tggtggtgtgttgttcgtcgt 505  Q
    ||||||| |||||||||||||    
T  32680660 tggtggtttgttgttcgtcgt 32680640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 480 - 564
Target Start/End: Complemental strand, 37614209 - 37614125
Alignment:
Q  480 gagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||| |||||||||| ||||||| |||| ||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  37614209 gagtgtggtgatgtgttgttcttcgtcttgtgcgtcgttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaa 37614125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 387 - 508
Target Start/End: Complemental strand, 41712942 - 41712821
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttc-gtgatttcatcatccgagtgt 485  Q
    ||||||||| | |||||| |||||||| || || ||| ||||||||||||||| ||||||||| ||||||||||  || |||||||| |||||  |||||    
T  41712942 aaatcacccattttcatcattttctctctattttaatctaaataagtgatttt-cacatagatttaggtttttttctctgtgatttcctcatctaagtgt 41712844  T
Q  486 ggtggtgtgttgttcgtcgtctt 508  Q
    |||||| ||||||||||||||||    
T  41712843 ggtggtttgttgttcgtcgtctt 41712821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 462 - 547
Target Start/End: Complemental strand, 12648055 - 12647970
Alignment:
Q  462 ttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttc 547  Q
    |||||||||||||| ||  |||| |||| |||||||||||||||||| |||| |||||||||||||| ||| ||||||||||||||    
T  12648055 ttcgtgatttcatcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttctcgtcttgttgcggtgttc 12647970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 395 - 476
Target Start/End: Complemental strand, 31581888 - 31581808
Alignment:
Q  395 cctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatca 476  Q
    ||||||||||||||||||| || |||||| ||||||||||| ||||||||||||||||| |||||||||  |||||||||||    
T  31581888 cctcttcatctttttctctctatttcaatctaaataagtga-ttttcacatagatctagtttttttctttttgatttcatca 31581808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 386 - 561
Target Start/End: Original strand, 38293449 - 38293627
Alignment:
Q  386 aaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggt-----tttttcttcgtgatttcatcatccg 480  Q
    |||||||| | |||||||| |||||| | || ||||||  |||||||||||||  ||||||||||||| |     ||||||||||||||||| || | ||    
T  38293449 aaaatcactcatcttcatcattttctatgtatttcaatcaaaataagtgattt--cacatagatctagttctttttttttcttcgtgatttcttcgtacg 38293546  T
Q  481 agtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    ||||  ||| | |||||||||||||||| || ||||||||||||| |||||| || ||||  |||||||||| || |||||    
T  38293547 agtgcagtgttatgttgttcgtcgtcttgtgtgacgttgtttgatatcccgtcttattgcaatgttcatttggtttatatt 38293627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 381 - 460
Target Start/End: Original strand, 42949612 - 42949691
Alignment:
Q  381 gacttaaaatcacccctcttcatc-tttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt 460  Q
    ||||| |||||||||||||||||| ||||||||| || |||||| ||||||||||| ||||||||||||||||||||||||    
T  42949612 gacttgaaatcacccctcttcatcttttttctctttatttcaatctaaataagtga-ttttcacatagatctaggtttttt 42949691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 418 - 548
Target Start/End: Original strand, 10248083 - 10248211
Alignment:
Q  418 ttcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgt 517  Q
    |||||| ||| |||||||||| | | ||||||||||||||| ||||||||| ||| ||||| |||||||| ||||||||||| | ||||||||  | |||    
T  10248083 ttcaatctaattaagtgatttct-atatagatctaggtttt-tcttcgtgacttcgtcatctgagtgtggcggtgtgttgtttgccgtcttatatggcgt 10248180  T
Q  518 tgtttgatttcccgtattgttgcggtgttca 548  Q
    | ||| ||||||||| || ||||||||||||    
T  10248181 ttttttatttcccgttttattgcggtgttca 10248211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 462 - 564
Target Start/End: Complemental strand, 29574763 - 29574661
Alignment:
Q  462 ttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    ||||||||||| || |||||||| || | |||||||||||||||||| |||| | |||||||||||| | | ||||||| |||||  |||||||||||||    
T  29574763 ttcgtgatttcgtcgtccgagtgcggcgttgtgttgttcgtcgtcttgtgcggcattgtttgatttcacattttgttgcagtgtttgtttgattcatatt 29574664  T
Q  562 gaa 564  Q
    |||    
T  29574663 gaa 29574661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 457 - 564
Target Start/End: Original strand, 10929624 - 10929732
Alignment:
Q  457 ttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttg-tttgatttcccgtattgttgcggtgttcatttgatt 555  Q
    |||| ||||||||||| || || ||||| |||| |||||||||||||||||| | |||||||| ||||||||  ||| |||||||||||||| |||| ||    
T  10929624 tttttttcgtgatttcgtcgtctgagtgcggtgttgtgttgttcgtcgtcttgtacgacgttgttttgatttagcgtcttgttgcggtgttcgtttggtt 10929723  T
Q  556 catattgaa 564  Q
    ||| |||||    
T  10929724 catgttgaa 10929732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 386 - 564
Target Start/End: Original strand, 24587617 - 24587789
Alignment:
Q  386 aaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtg 484  Q
    ||||||||| |||||||||||||| |||||| |||||| ||||||| ||||||         ||||||||||||| |||| ||||||| |  || |||||    
T  24587617 aaaatcacctctcttcatctttttatctatatttcaatttaaataaatgatttgc-------atctaggtttttttcttcatgatttcgttgtctgagtg 24587709  T
Q  485 tggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
     ||   |||| | ||||||||||| ||   ||||| |||||||| ||||||||||||||||||||||  |||||||||||    
T  24587710 cggcaatgtgatattcgtcgtcttgtgtagcgttgattgatttctcgtattgttgcggtgttcatttagttcatattgaa 24587789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 491 - 564
Target Start/End: Complemental strand, 28534060 - 28533987
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||||| |||||| |||||||||||||||||||   | |||||||||||||| |||||||| |||||||    
T  28534060 tgtgttgttcgccgtcttgtgcgacgttgtttgatttcaaatcttgttgcggtgttcgtttgattcctattgaa 28533987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 396 - 561
Target Start/End: Complemental strand, 13719327 - 13719159
Alignment:
Q  396 ctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt----cttcgtgatttcatcatccgagtgtggtggt 491  Q
    |||||| |||||||||||  | |||||| |||||||||||||||| | ||||||| | |||||||    |||  || ||| ||| ||  ||||||| | |    
T  13719327 ctcttcgtctttttctctccatttcaatttaaataagtgattttt-atatagatcaaagttttttttttctttatgcttttatcgtcaaagtgtggcgtt 13719229  T
Q  492 gtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    | |||||| || ||||| | |||||||||||| |||||||| || ||| | |||||||||||||||||||    
T  13719228 gagttgtttgttgtcttgtacgacgttgtttggtttcccgttttattgtgatgttcatttgattcatatt 13719159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 517 - 564
Target Start/End: Complemental strand, 84227 - 84180
Alignment:
Q  517 ttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||||||| ||  |||||||||||||||||||||||||||    
T  84227 ttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaa 84180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 456 - 526
Target Start/End: Complemental strand, 34128825 - 34128755
Alignment:
Q  456 tttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatt 526  Q
    ||||| ||||| ||||| || || ||||| |||| | |||||||||||||||| |||||||||||||||||    
T  34128825 ttttttttcgttatttcgtcgtctgagtgcggtgttatgttgttcgtcgtcttgtgcgacgttgtttgatt 34128755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 481 - 564
Target Start/End: Complemental strand, 4904258 - 4904178
Alignment:
Q  481 agtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||| | |||||||||||||||||| ||||||   |||||||||   || |||||||||||||| |||| |||||||||||    
T  4904258 agtgtggcgttgtgttgttcgtcgtcttgtgcgac---gtttgattttgtgtcttgttgcggtgttcgtttggttcatattgaa 4904178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 491 - 564
Target Start/End: Complemental strand, 28227786 - 28227713
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||| ||||||||||||| |||||||||||| |||||| ||| ||||||| || ||| || ||||| |||||||    
T  28227786 tgtgctgttcgtcgtcttgtgcgacgttgttagatttctcgtcttgttgctgtattcgttggattcttattgaa 28227713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 491 - 564
Target Start/End: Complemental strand, 32448724 - 32448652
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||||||||| |||| |||||||||||||  | | ||||||||||||||  ||| |||||||||||    
T  32448724 tgtgttgttcgtcgtcttgtgcgccgttgtttgatttggcatcttgttgcggtgttc-gttggttcatattgaa 32448652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 491 - 564
Target Start/End: Original strand, 37416704 - 37416777
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||||||||| ||||||||||||||||||| | | ||||||   |||||  ||| |||||||||||    
T  37416704 tgtgttgttcgtcgtcttgtgcgacgttgtttgatttcacatcttgttgtaatgttcggttggttcatattgaa 37416777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 455 - 564
Target Start/End: Original strand, 37994237 - 37994346
Alignment:
Q  455 ttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgat 554  Q
    |||| ||||||||||||| |  || ||||| || | ||||||||||||| || | | || | |||||||||||  | | ||||||| |||||||||||||    
T  37994237 ttttatcttcgtgatttcgttgtctgagtgcggcgttgtgttgttcgtcttcctgtacggcattgtttgattttgcatcttgttgcagtgttcatttgat 37994336  T
Q  555 tcatattgaa 564  Q
    ||||||||||    
T  37994337 tcatattgaa 37994346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 564
Target Start/End: Original strand, 18113787 - 18113950
Alignment:
Q  399 ttcatctttttctctataattcaatataaataagtgatttttcacatagatctagg-ttttttcttcgtgatttcatcatccgagtgtggtggtgtgttg 497  Q
    ||||||||||||| |||| || ||| || |||||||||||  |||||| || || | ||||||||||||||||| ||| || |    ||||| ||| |||    
T  18113787 ttcatctttttctttatatttaaatttagataagtgattt--cacataaatttatgcttttttcttcgtgattttatcgtctggacatggtgttgt-ttg 18113883  T
Q  498 ttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||  | ||||| |||| ||||||||||||| |||| || |||||||||| || || |||||||||||    
T  18113884 tttatggtcttgtgcggcgttgtttgattttccgtcttattgcggtgttaatatggttcatattgaa 18113950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 387 - 563
Target Start/End: Complemental strand, 30923649 - 30923474
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctag---gttttttcttcgtgatttcatcatccgagt 483  Q
    ||||||||| |||||||||||| ||||||  |||||| ||||||| |||||||| ||||||||| ||    ||| | ||| |||||||| || || | ||    
T  30923649 aaatcacccatcttcatcttttactctat--ttcaatctaaataaatgattttt-acatagatcaagataatttctcctttgtgatttcgtcgtctgggt 30923553  T
Q  484 gtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattga 563  Q
    |||| | ||||||||  |||||||| |||| |||| |||||||||  || |||||||  | |||||||| ||| ||||||    
T  30923552 gtggcgctgtgttgtatgtcgtcttgtgcggcgtt-tttgatttcttgtcttgttgcaatattcatttggttcttattga 30923474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 465 - 564
Target Start/End: Original strand, 4264443 - 4264539
Alignment:
Q  465 gtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||| || || ||||| | || || ||||||||||||||| ||||    ||||||||||| ||| || |||||||||||||||| ||| |||||||    
T  4264443 gtgatttcgtcgtcggagtgagatgttgcgttgttcgtcgtcttgtgcgg---tgtttgatttcgcgtcttattgcggtgttcatttggttcttattgaa 4264539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 564
Target Start/End: Original strand, 36323801 - 36323936
Alignment:
Q  425 taaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttga 524  Q
    ||||||||||||||| ||||||||| ||||||||||||  |||||||| || |  ||||| ||   ||||||||| || ||||| |||| |   ||||||    
T  36323801 taaataagtgatttt-cacatagatttaggttttttctctgtgatttcgtcgtttgagtgcggctttgtgttgtttgttgtcttgtgcggc---gtttga 36323896  T
Q  525 tttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||| ||| ||||||   |||||||||| ||| |||||||    
T  36323897 tttctcgtcttgttgaaatgttcatttggttcctattgaa 36323936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 462 - 518
Target Start/End: Original strand, 6436576 - 6436631
Alignment:
Q  462 ttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgtt 518  Q
    |||||||||||||  || |||||||||| ||||| |||||||||||| |||||||||    
T  6436576 ttcgtgatttcatggtctgagtgtggtgttgtgt-gttcgtcgtcttgtgcgacgtt 6436631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 463 - 527
Target Start/End: Complemental strand, 10792987 - 10792923
Alignment:
Q  463 tcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgattt 527  Q
    |||||||||||||||  ||| |  ||| |||||||||||||||||| || |||||||||| ||||    
T  10792987 tcgtgatttcatcatatgagagcagtgctgtgttgttcgtcgtcttgtgggacgttgtttaattt 10792923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 462 - 564
Target Start/End: Complemental strand, 43397251 - 43397152
Alignment:
Q  462 ttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    ||||||||||| || ||  ||||||| | |||||||||||||||||| || | |   |||||||||| ||| |||| ||||||||| |||  ||||||||    
T  43397251 ttcgtgatttcgtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgtggc---gtttgatttcgcgtcttgtcgcggtgttcgtttatttcatatt 43397155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 95; Significance: 4e-46; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 401 - 567
Target Start/End: Complemental strand, 201534 - 201369
Alignment:
Q  401 catctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttc 500  Q
    |||||||||||||||| |||||| ||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||  |||||| |||| ||||||||    
T  201534 catctttttctctatatttcaatctaaataagtgatttt-cacatagatctagattttttctttgtgatttcatcatctaagtgtgatggtttgttgttc 201436  T
Q  501 gtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaagat 567  Q
    || ||||| |||| || ||||||||||| ||| || ||| |||||||||||||||||||||||||||    
T  201435 gtagtcttgtgcggcgctgtttgatttcacgtcttcttgtggtgttcatttgattcatattgaagat 201369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 75; Significance: 3e-34; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 387 - 564
Target Start/End: Original strand, 5298 - 5475
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggtttttt-cttcgtgatttcatcatccgagtgt 485  Q
    ||||||||||||||||||||| ||||| || |||||| ||||||||||| |||| ||||| ||||| ||||||| ||| |||||||||||||   |||||    
T  5298 aaatcacccctcttcatctttctctctctacttcaatctaaataagtgactttt-acatatatctatgtttttttctttgtgatttcatcatttaagtgt 5396  T
Q  486 ggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    | |||| |||||||||||||||| |||| ||||||||| |||||||| || ||| ||||||||||| |||  |||||||    
T  5397 gatggtttgttgttcgtcgtcttgtgcggcgttgtttgctttcccgtcttcttgtggtgttcattttatttctattgaa 5475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 387 - 556
Target Start/End: Complemental strand, 361971 - 361807
Alignment:
Q  387 aaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtg 486  Q
    ||||||||||||| |||||||||||||||  |||||| ||||||||| ||||| ||||||||  |||||||||| |  |||||||||||||   ||| ||    
T  361971 aaatcacccctctccatctttttctctat--ttcaatctaaataagtaatttt-cacatagagttaggtttttttt--gtgatttcatcatttaagtatg 361877  T
Q  487 gtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattc 556  Q
    ||||| |||||||||||||||| |||| ||||||||||||||| || ||| ||| |||||||||||||||    
T  361876 gtggtttgttgttcgtcgtcttgtgcggcgttgtttgatttcctgtcttggtgcagtgttcatttgattc 361807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 405 - 564
Target Start/End: Original strand, 453851 - 454009
Alignment:
Q  405 tttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcg 504  Q
    ||||||||| || || ||| ||||||||||||||| |||||| || || ||||||||||||||||||| | ||  || |||| |||||||||||||||||    
T  453851 tttttctctttattttaatttaaataagtgatttt-cacatatatttacgttttttcttcgtgatttcgttatttgattgtgatggtgtgttgttcgtcg 453949  T
Q  505 tcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||  ||| ||||||||||||| | || |||||||||||||||||||| ||||||||||    
T  453950 tcttgggcggcgttgtttgattttcagtcttgttgcggtgttcatttgactcatattgaa 454009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 382 - 499
Target Start/End: Original strand, 8615 - 8731
Alignment:
Q  382 acttaaaatcacccctcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccga 481  Q
    |||| ||||||||||| ||||||||||| ||| || |||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||  |    
T  8615 acttgaaatcaccccttttcatctttttatctctatttcaatctaaataagtgatttt-cacatagatctaggttttttctttgtgatttcatcatctaa 8713  T
Q  482 gtgtggtggtgtgttgtt 499  Q
    |||||||||| |||||||    
T  8714 gtgtggtggtttgttgtt 8731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 66; Significance: 7e-29; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 397 - 561
Target Start/End: Complemental strand, 16489 - 16323
Alignment:
Q  397 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttc---gtgatttcatcatccgagtgtggtggtgt 493  Q
    ||||||||| ||||||| || |||||| ||||||||||||||| ||||||||| |||||||||| |||   ||||||||||||||  ||||||||||| |    
T  16489 tcttcatctgtttctctctatttcaatctaaataagtgatttt-cacatagatttaggtttttttttctttgtgatttcatcatctaagtgtggtggttt 16391  T
Q  494 gttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatatt 561  Q
    |||||| |||||||| |||| ||||||||||| ||  || ||   |||||||| ||||||||||||||    
T  16390 gttgtttgtcgtcttgtgcggcgttgtttgatatcttgttttcgcgcggtgttgatttgattcatatt 16323  T

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Target: scaffold0264 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 467 - 558
Target Start/End: Complemental strand, 20493 - 20402
Alignment:
Q  467 gatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcat 558  Q
    ||||||||||||  ||||||||||| |||||||||||||||| |||||||||||||||||| |||| || ||||||||||||||||||||||    
T  20493 gatttcatcatctaagtgtggtggtttgttgttcgtcgtcttgtgcgacgttgtttgattttccgttttcttgcggtgttcatttgattcat 20402  T

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Target: scaffold0347 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 491 - 564
Target Start/End: Original strand, 6014 - 6087
Alignment:
Q  491 tgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  6014 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtattgttgcggtgttcatttggttcatattgaa 6087  T

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Target: scaffold0426 (Bit Score: 56; Significance: 7e-23; HSPs: 2)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 481 - 564
Target Start/End: Original strand, 6299 - 6382
Alignment:
Q  481 agtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    ||||||||||| |||||||||||||||| | || | |||||||||||||||| || ||||||||||||||||||||||||||||    
T  6299 agtgtggtggtttgttgttcgtcgtcttgtacggcattgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaa 6382  T

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Target: scaffold0426; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 385 - 439
Target Start/End: Original strand, 6236 - 6290
Alignment:
Q  385 taaaatcacccctcttcatctttttctctataattcaatataaataagtgatttt 439  Q
    ||||||||||||||||||||||||| ||| || | |||| |||||||||||||||    
T  6236 taaaatcacccctcttcatctttttttctctattccaatctaaataagtgatttt 6290  T

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Target: scaffold0022 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 455 - 564
Target Start/End: Complemental strand, 83544 - 83438
Alignment:
Q  455 ttttttcttcgtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgat 554  Q
    ||||||||| ||||||||||||||  ||||||||||| ||||||| |||   || |||| |||||||||||||| ||| ||  |||||| ||||||||||    
T  83544 ttttttctttgtgatttcatcatctaagtgtggtggtttgttgtttgtc---ttgtgcggcgttgtttgatttctcgtcttcgtgcggtattcatttgat 83448  T
Q  555 tcatattgaa 564  Q
    ||||||||||    
T  83447 tcatattgaa 83438  T

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Target: scaffold0113 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 397 - 564
Target Start/End: Complemental strand, 36852 - 36687
Alignment:
Q  397 tcttcatctttttctctataattcaatataaataagtgatttttcacatagatctaggttttttcttcgtgatttcatcatccgagtgtggtggtgtgtt 496  Q
    ||||||||||||||  | || ||||||||||||||||||||||| ||||| | ||| ||||||||||| ||||||  |  |  ||||||  || ||||||    
T  36852 tcttcatctttttcgttgtatttcaatataaataagtgattttt-acatata-ctaagttttttcttcatgatttggttgtgtgagtgtcttgttgtgtt 36755  T
Q  497 gttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||||||| ||||  |||||||||||||   | |||||| |||| | ||||| |||||||||||    
T  36754 gttcgtcgtcttgtgcggagttgtttgatttcttttcttgttgtggtgattatttggttcatattgaa 36687  T

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Target: scaffold0136 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 501 - 564
Target Start/End: Complemental strand, 34843 - 34780
Alignment:
Q  501 gtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||| |||||| |||||||||||| ||| ||||||| | |||||||||||||||||||||    
T  34843 gtcgtcttctgcgacattgtttgatttctcgttttgttgcagggttcatttgattcatattgaa 34780  T

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Target: scaffold0042 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 465 - 564
Target Start/End: Complemental strand, 92627 - 92528
Alignment:
Q  465 gtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgttcatttgattcatattgaa 564  Q
    |||||||| || || ||||||| || ||||||| ||  |||||| ||||| ||||||||||||| ||| |||||| ||||||| |||| |||||||||||    
T  92627 gtgatttcgtcgtctgagtgtgttgttgtgttgctcaccgtcttgtgcgatgttgtttgatttcacgtcttgttgtggtgttcgtttggttcatattgaa 92528  T

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Target: scaffold0127 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 465 - 546
Target Start/End: Original strand, 15452 - 15531
Alignment:
Q  465 gtgatttcatcatccgagtgtggtggtgtgttgttcgtcgtcttatgcgacgttgtttgatttcccgtattgttgcggtgtt 546  Q
    |||||||| |||||  |||| |||| |||||||||||||||||| |||| |||  ||||||||| ||| |||| ||||||||    
T  15452 gtgatttcgtcatctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgt--tttgatttcgcgtcttgtcgcggtgtt 15531  T

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