View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13882_low_5 (Length: 221)

Name: NF13882_low_5
Description: NF13882
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13882_low_5
NF13882_low_5
[»] chr3 (28 HSPs)
chr3 (8-126)||(52114269-52114387)
chr3 (140-217)||(1801449-1801526)
chr3 (140-217)||(41753022-41753099)
chr3 (136-220)||(30580755-30580839)
chr3 (140-208)||(45103112-45103180)
chr3 (127-218)||(30734392-30734483)
chr3 (151-221)||(47492061-47492131)
chr3 (141-221)||(51046077-51046157)
chr3 (133-199)||(43139785-43139851)
chr3 (140-217)||(50524760-50524837)
chr3 (140-199)||(41752967-41753026)
chr3 (140-199)||(47492123-47492182)
chr3 (163-221)||(30476500-30476558)
chr3 (163-221)||(33689230-33689288)
chr3 (161-217)||(47677279-47677335)
chr3 (140-199)||(33689179-33689238)
chr3 (140-199)||(51046149-51046208)
chr3 (163-217)||(29031740-29031794)
chr3 (136-221)||(43139717-43139793)
chr3 (123-184)||(55223218-55223279)
chr3 (140-199)||(30734478-30734537)
chr3 (163-221)||(49418717-49418775)
chr3 (163-221)||(50550029-50550087)
chr3 (164-214)||(55223293-55223343)
chr3 (127-199)||(50549965-50550037)
chr3 (141-199)||(30580832-30580890)
chr3 (143-191)||(18321657-18321705)
chr3 (136-184)||(39429996-39430044)
[»] chr4 (36 HSPs)
chr4 (134-221)||(47661896-47661983)
chr4 (134-221)||(23444266-23444353)
chr4 (140-221)||(42375064-42375145)
chr4 (140-221)||(51265499-51265580)
chr4 (140-221)||(6271756-6271837)
chr4 (140-218)||(35682223-35682301)
chr4 (140-221)||(53954664-53954745)
chr4 (133-199)||(23444345-23444411)
chr4 (140-199)||(3862622-3862681)
chr4 (140-199)||(3871379-3871438)
chr4 (134-221)||(44379984-44380071)
chr4 (140-199)||(51265448-51265507)
chr4 (161-217)||(40789237-40789293)
chr4 (140-199)||(6271705-6271764)
chr4 (163-221)||(50384131-50384189)
chr4 (140-199)||(30861850-30861909)
chr4 (151-217)||(25818387-25818453)
chr4 (163-217)||(31430487-31430541)
chr4 (163-217)||(52028607-52028661)
chr4 (140-221)||(47404597-47404669)
chr4 (151-199)||(47661856-47661904)
chr4 (163-214)||(24006096-24006147)
chr4 (175-221)||(55090034-55090080)
chr4 (141-214)||(38714884-38714957)
chr4 (169-217)||(28693955-28694003)
chr4 (140-199)||(26186090-26186149)
chr4 (187-221)||(30861824-30861858)
chr4 (175-217)||(45591448-45591490)
chr4 (136-185)||(2325070-2325119)
chr4 (140-185)||(30709990-30710035)
chr4 (149-214)||(47762669-47762734)
chr4 (130-163)||(54716351-54716384)
chr4 (129-185)||(47762600-47762656)
chr4 (175-221)||(26186054-26186098)
chr4 (140-199)||(35682169-35682228)
chr4 (141-197)||(44379934-44379990)
[»] chr8 (28 HSPs)
chr8 (140-221)||(5033215-5033296)
chr8 (140-221)||(33841594-33841675)
chr8 (140-221)||(35440972-35441053)
chr8 (141-217)||(10086815-10086891)
chr8 (140-199)||(5033164-5033223)
chr8 (140-221)||(8796476-8796557)
chr8 (140-217)||(45191130-45191207)
chr8 (140-199)||(33841667-33841726)
chr8 (140-199)||(35441045-35441104)
chr8 (140-221)||(5667151-5667232)
chr8 (164-221)||(8243415-8243472)
chr8 (141-217)||(39851013-39851089)
chr8 (127-199)||(43844545-43844617)
chr8 (127-221)||(6296659-6296753)
chr8 (140-199)||(2581828-2581887)
chr8 (140-199)||(8243464-8243523)
chr8 (140-199)||(22649848-22649907)
chr8 (140-217)||(4958657-4958733)
chr8 (140-198)||(5667100-5667158)
chr8 (175-221)||(34229695-34229741)
chr8 (163-221)||(34541829-34541887)
chr8 (154-214)||(31159912-31159972)
chr8 (140-199)||(8796425-8796484)
chr8 (162-212)||(35031639-35031689)
chr8 (141-221)||(43844475-43844553)
chr8 (140-199)||(45191203-45191262)
chr8 (125-199)||(34229629-34229703)
chr8 (160-212)||(37618750-37618802)
[»] chr5 (39 HSPs)
chr5 (140-221)||(16971198-16971279)
chr5 (140-221)||(2953244-2953325)
chr5 (140-221)||(3899893-3899974)
chr5 (140-221)||(29699421-29699502)
chr5 (134-221)||(30117825-30117912)
chr5 (128-218)||(12913860-12913950)
chr5 (140-221)||(2093940-2094021)
chr5 (140-217)||(19655216-19655293)
chr5 (136-198)||(291096-291158)
chr5 (140-221)||(291151-291232)
chr5 (133-218)||(28818974-28819059)
chr5 (140-199)||(19655161-19655220)
chr5 (163-221)||(16439192-16439250)
chr5 (140-221)||(2356328-2356406)
chr5 (141-199)||(30117904-30117962)
chr5 (140-220)||(26662454-26662535)
chr5 (140-220)||(26934049-26934130)
chr5 (151-199)||(29699381-29699429)
chr5 (140-199)||(19598335-19598394)
chr5 (163-221)||(3180086-3180144)
chr5 (164-217)||(16802502-16802555)
chr5 (168-221)||(38134404-38134457)
chr5 (140-199)||(1638460-1638519)
chr5 (140-199)||(12913806-12913865)
chr5 (141-208)||(19272270-19272337)
chr5 (140-194)||(13312267-13312321)
chr5 (163-221)||(19598386-19598443)
chr5 (140-194)||(32485630-32485684)
chr5 (143-199)||(3180136-3180191)
chr5 (137-192)||(31147137-31147193)
chr5 (151-202)||(7009401-7009452)
chr5 (129-184)||(39031242-39031297)
chr5 (145-199)||(16439146-16439200)
chr5 (140-173)||(39777054-39777087)
chr5 (141-217)||(228408-228484)
chr5 (163-199)||(3899865-3899901)
chr5 (160-208)||(14167175-14167223)
chr5 (163-199)||(16971170-16971206)
chr5 (140-184)||(22083001-22083045)
[»] chr1 (47 HSPs)
chr1 (140-221)||(5995423-5995504)
chr1 (140-221)||(48993920-48994001)
chr1 (134-221)||(15220865-15220952)
chr1 (141-221)||(29179601-29179681)
chr1 (127-217)||(29371426-29371516)
chr1 (140-221)||(17127567-17127648)
chr1 (144-221)||(32540755-32540832)
chr1 (140-199)||(48993993-48994052)
chr1 (143-221)||(33219627-33219705)
chr1 (140-199)||(29179673-29179732)
chr1 (133-199)||(44706860-44706926)
chr1 (140-221)||(49444916-49444995)
chr1 (140-199)||(9157313-9157372)
chr1 (140-199)||(21630045-21630104)
chr1 (140-199)||(46932000-46932059)
chr1 (163-221)||(741528-741586)
chr1 (163-221)||(1819515-1819573)
chr1 (127-217)||(4609054-4609135)
chr1 (134-199)||(28395634-28395699)
chr1 (127-192)||(36290490-36290555)
chr1 (140-199)||(37155049-37155108)
chr1 (163-221)||(44706809-44706868)
chr1 (144-199)||(45728294-45728349)
chr1 (163-221)||(34062263-34062321)
chr1 (163-221)||(37155100-37155158)
chr1 (140-193)||(46932064-46932116)
chr1 (161-217)||(28928803-28928859)
chr1 (169-221)||(46333978-46334030)
chr1 (161-217)||(48498473-48498529)
chr1 (140-199)||(1091620-1091679)
chr1 (140-199)||(5995372-5995431)
chr1 (140-199)||(32540824-32540883)
chr1 (163-221)||(38674531-38674587)
chr1 (175-217)||(1091582-1091624)
chr1 (175-221)||(45728341-45728387)
chr1 (161-217)||(8337875-8337931)
chr1 (169-221)||(9157364-9157416)
chr1 (140-199)||(17127640-17127699)
chr1 (175-217)||(47303453-47303495)
chr1 (127-199)||(4608986-4609058)
chr1 (140-199)||(48498418-48498477)
chr1 (187-217)||(36290457-36290487)
chr1 (175-221)||(48604985-48605031)
chr1 (163-208)||(19711206-19711251)
chr1 (164-208)||(2573182-2573226)
chr1 (163-199)||(8337927-8337963)
chr1 (163-199)||(49444987-49445023)
[»] chr2 (25 HSPs)
chr2 (140-221)||(29508693-29508775)
chr2 (140-217)||(6217227-6217304)
chr2 (140-221)||(16514478-16514559)
chr2 (127-217)||(14470582-14470672)
chr2 (140-221)||(6722005-6722086)
chr2 (140-221)||(14229356-14229437)
chr2 (140-217)||(37961764-37961841)
chr2 (140-221)||(38933641-38933722)
chr2 (140-198)||(9173058-9173116)
chr2 (136-200)||(33018620-33018684)
chr2 (134-217)||(14892318-14892401)
chr2 (140-221)||(24115974-24116055)
chr2 (140-199)||(16514427-16514486)
chr2 (140-199)||(29508767-29508826)
chr2 (163-221)||(2828638-2828696)
chr2 (147-217)||(29925580-29925650)
chr2 (164-217)||(15011338-15011391)
chr2 (127-208)||(32545855-32545936)
chr2 (164-221)||(37762028-37762085)
chr2 (151-199)||(15011294-15011342)
chr2 (134-221)||(2894017-2894095)
chr2 (140-183)||(45213892-45213935)
chr2 (151-199)||(6721965-6722013)
chr2 (163-199)||(38933613-38933649)
chr2 (165-217)||(8534204-8534256)
[»] scaffold0586 (2 HSPs)
scaffold0586 (140-221)||(7050-7131)
scaffold0586 (140-199)||(7123-7181)
[»] chr7 (27 HSPs)
chr7 (140-221)||(11016923-11017004)
chr7 (140-221)||(42628349-42628430)
chr7 (143-217)||(48000795-48000869)
chr7 (140-221)||(38975859-38975940)
chr7 (140-212)||(48000697-48000769)
chr7 (140-221)||(4290599-4290680)
chr7 (156-217)||(15027600-15027661)
chr7 (140-196)||(41018307-41018363)
chr7 (140-199)||(11016872-11016931)
chr7 (161-217)||(29053338-29053394)
chr7 (161-217)||(34854719-34854775)
chr7 (140-195)||(4290548-4290603)
chr7 (174-217)||(7671948-7671991)
chr7 (140-199)||(34854771-34854830)
chr7 (140-199)||(38975808-38975867)
chr7 (140-196)||(45231929-45231985)
chr7 (163-221)||(41018254-41018312)
chr7 (140-206)||(41945924-41945990)
chr7 (143-199)||(15027548-15027604)
chr7 (140-199)||(27028731-27028790)
chr7 (175-217)||(27028831-27028873)
chr7 (136-221)||(4649374-4649452)
chr7 (155-199)||(22764776-22764820)
chr7 (177-218)||(10419515-10419556)
chr7 (134-163)||(25001391-25001420)
chr7 (163-196)||(42628321-42628354)
chr7 (186-214)||(30217503-30217531)
[»] scaffold0016 (2 HSPs)
scaffold0016 (140-221)||(49706-49787)
scaffold0016 (163-199)||(49779-49815)
[»] chr6 (14 HSPs)
chr6 (136-221)||(24618600-24618685)
chr6 (143-221)||(12343154-12343232)
chr6 (134-221)||(13043511-13043598)
chr6 (140-217)||(17750960-17751037)
chr6 (161-221)||(10521873-10521933)
chr6 (140-200)||(24975755-24975815)
chr6 (175-221)||(551203-551249)
chr6 (133-199)||(551241-551307)
chr6 (140-199)||(24587464-24587523)
chr6 (163-221)||(2315330-2315388)
chr6 (140-201)||(7384491-7384552)
chr6 (133-172)||(13043444-13043483)
chr6 (178-221)||(24587515-24587558)
chr6 (125-198)||(17750891-17750963)
[»] scaffold0180 (1 HSPs)
scaffold0180 (128-217)||(19113-19202)
[»] scaffold0161 (2 HSPs)
scaffold0161 (140-221)||(27223-27304)
scaffold0161 (140-196)||(27299-27355)
[»] scaffold0481 (1 HSPs)
scaffold0481 (163-217)||(2913-2967)
[»] scaffold1033 (1 HSPs)
scaffold1033 (169-221)||(2267-2319)
[»] scaffold1029 (1 HSPs)
scaffold1029 (169-221)||(2267-2319)
[»] scaffold0047 (1 HSPs)
scaffold0047 (163-217)||(63815-63869)
[»] scaffold0536 (1 HSPs)
scaffold0536 (154-214)||(4909-4969)


Alignment Details
Target: chr3 (Bit Score: 86; Significance: 3e-41; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 52114387 - 52114269
Alignment:
Q  8 attatactcttagtcaaaagattaactgataaaattttataaaattttcatttgcatataatctacgatattatttagtagaattgtttgaaagannnnn 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||         
T  52114387 attatactcttagtcaaaagattaactgataaaattttataaaattttcatctgcatataatctacgatattatttagtagaattgtatgatagattttt 52114288  T
Q  108 nnatcagcatatatatttt 126  Q
      |||||||||||||||||    
T  52114287 ctatcagcatatatatttt 52114269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 1801449 - 1801526
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  1801449 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 1801526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 41753099 - 41753022
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    |||||||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  41753099 gtgacatagagttgagtgacattggtgacattggccaatcacaatgccacaatgcttgtgaaagagaaagaaacacaa 41753022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 30580755 - 30580839
Alignment:
Q  136 ttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagca 220  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||  |||||||||||| |||||||||||||    
T  30580755 ttgagtgacatagaattgggtgacattggtgatattgaccaatcataatgtcacaatatttgtgaaagagatagaaacacaagca 30580839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 45103112 - 45103180
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagaga 208  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  45103112 gtgacatagagttgggtgacattggtgatattgatcaatcacaatgtcacaatgcttgtgaaagagaga 45103180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 127 - 218
Target Start/End: Original strand, 30734392 - 30734483
Alignment:
Q  127 ggatagtatttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaag 218  Q
    |||||| | ||| ||||||||||||| |||||||||| ||| ||||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  30734392 ggatagaacttgtgtgacatagagtttggtgacattgatgacattgaccgatcacaatgtcacaatgcttgtgaaagatagagaaacacaag 30734483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 47492061 - 47492131
Alignment:
Q  151 ttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||||||||||||||| |||| |||||||||||| |||||||||||||||| ||||||||||||||||||    
T  47492061 ttgggtgacattggtgacattggccaatcacaatgtcacaatgcttgtgaaaaagagagaaacacaagcat 47492131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 51046077 - 51046157
Alignment:
Q  141 tgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||||||||||||| ||| |||||||| ||||| |||||| |||| ||||||| |||||||||||||||||||||||||||    
T  51046077 tgacatagagttggatgatattggtgacattgatcaatcataatgtcacaatgtttgtgaaagagagagaaacacaagcat 51046157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 43139851 - 43139785
Alignment:
Q  133 tatttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||| |||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||    
T  43139851 tatttgggtgacatagagttgggtgacattggtgacattggccaataacaatgccacaatgcttgtg 43139785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 50524837 - 50524760
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    |||||||||||||| |||||||||||||||||   |||||||||||  || |||||||||||||||||||||||||||    
T  50524837 gtgacatagagttgagtgacattggtgatattagtcaatcacaatgttacgatgcttgtgaaagagagagaaacacaa 50524760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 41752967 - 41753026
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||    
T  41752967 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgtttgtg 41753026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 47492182 - 47492123
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||    
T  47492182 gtgacatagagttgggtgacattggtcatattggccaatcacaatgtcacaatgcttgtg 47492123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 30476500 - 30476558
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  30476500 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 30476558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 33689288 - 33689230
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  33689288 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 33689230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 47677279 - 47677335
Alignment:
Q  161 ttggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  47677279 ttggtgacattgaccgatcacaatgtcacaatgcttgtgaaagagagagaaacacaa 47677335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 33689179 - 33689238
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||| |||||||||||||    
T  33689179 gtgacatagagttgggtgacattgatgatattggtcaatcacaatgtcacaatgcttgtg 33689238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 51046208 - 51046149
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||||||||||||| |||||||||||| |||| ||||||||||||||| ||||||||||    
T  51046208 gtgacatagagttggatgacattggtgacattggccaatcacaatgccataatgcttgtg 51046149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 29031740 - 29031794
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||||||||  ||||||||||| |||||||||||||||||||||||||||||||    
T  29031740 ggtgatattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaa 29031794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 43139717 - 43139793
Alignment:
Q  136 ttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||||||||||||||||||||||||| |||         ||||||||||| || ||||||||||||||||||||||||||||||||    
T  43139717 ttgagtgacatagagttgggtgacatcggt---------caatcacaatgtcagaatgcttgtgaaagagagagaaacacaagcat 43139793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 55223218 - 55223279
Alignment:
Q  123 ttttggatagtatttgagtgacatagagttgggtgacattggtgatattgaccaatcacaat 184  Q
    |||||||||| | ||| ||||||||||||| |||||||||||||||||||  ||||||||||    
T  55223218 ttttggatagcacttgtgtgacatagagttaggtgacattggtgatattggtcaatcacaat 55223279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 30734537 - 30734478
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||||||||||| |||||||||||||| |||| |||||||||||| || ||| ||||||    
T  30734537 gtgacatagagttaggtgacattggtgacattggccaatcacaatgtcataatacttgtg 30734478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 49418717 - 49418775
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||||||||  ||||||||||| || |||  |||||||||||||||||||||||||||    
T  49418717 ggtgatattggtcaatcacaatgtcataatatttgtgaaagagagagaaacacaagcat 49418775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 50550087 - 50550029
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| ||||| |||||| |||| || |||| |||||||||||||||||||||||||||    
T  50550087 ggtgacattgatcaatcataatgtcataatgtttgtgaaagagagagaaacacaagcat 50550029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 55223343 - 55223293
Alignment:
Q  164 gtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaaca 214  Q
    |||||||||  |||||| |||| ||||||||||||||||||||||||||||    
T  55223343 gtgatattggtcaatcataatgtcacaatgcttgtgaaagagagagaaaca 55223293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 50549965 - 50550037
Alignment:
Q  127 ggatagtatttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||| || |||||||| ||| || ||||||| |||||||| ||||||||||||||||   ||||||||||||    
T  50549965 ggataatacttgagtgatataaagctgggtgatattggtgacattgaccaatcacaatattacaatgcttgtg 50550037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 30580890 - 30580832
Alignment:
Q  141 tgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||||||| |||||||||||| |||| ||||  ||||||||||| |||| ||||||||    
T  30580890 tgacatagaattgggtgacatttgtgacattggtcaatcacaatgtcacagtgcttgtg 30580832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 18321657 - 18321705
Alignment:
Q  143 acatagagttgggtgacattggtgatattgaccaatcacaatgccacaa 191  Q
    |||||||||||||||| |||||||| ||||  ||||||||||| |||||    
T  18321657 acatagagttgggtgatattggtgacattggtcaatcacaatgtcacaa 18321705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 184
Target Start/End: Complemental strand, 39430044 - 39429996
Alignment:
Q  136 ttgagtgacatagagttgggtgacattggtgatattgaccaatcacaat 184  Q
    |||||||||||| |||||||||||||| |||| |||| |||| ||||||    
T  39430044 ttgagtgacataaagttgggtgacattagtgacattggccaagcacaat 39429996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 3e-35; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 134 - 221
Target Start/End: Complemental strand, 47661983 - 47661896
Alignment:
Q  134 atttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  47661983 atttgggtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 47661896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 23444266 - 23444353
Alignment:
Q  134 atttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| || ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  23444266 atttgggtaacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 23444353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 42375145 - 42375064
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  42375145 gtgacatagagttgggtgacattggtgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 42375064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 51265580 - 51265499
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| |||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  51265580 gtgacttagagttgggtgacattggtgacattgaccaatcataatgtcacaatgcttgtgaaagagagagaaacacaagcat 51265499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 6271837 - 6271756
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||||||||||||| |||| |||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  6271837 gtgacatagagttgagtgatattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 6271756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 35682301 - 35682223
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaag 218  Q
    ||||||||||||| |||||||||||||| ||||||| ||||||||| |||||||||||||||||| |||||||||||||    
T  35682301 gtgacatagagttaggtgacattggtgacattgaccgatcacaatgtcacaatgcttgtgaaagatagagaaacacaag 35682223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 53954745 - 53954664
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||||||||||||||||||||||||||| |||| ||||| |||||| ||||||||||||||||||| ||||||||| |||||    
T  53954745 gtgacatagagttgggtgacattggtgacattgtccaattacaatgtcacaatgcttgtgaaagagtgagaaacactagcat 53954664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 23444411 - 23444345
Alignment:
Q  133 tatttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  23444411 tatttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 23444345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 3862681 - 3862622
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  3862681 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 3862622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 3871438 - 3871379
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  3871438 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 3871379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 134 - 221
Target Start/End: Complemental strand, 44380071 - 44379984
Alignment:
Q  134 atttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||  ||||| ||| | ||| |||||||||| |||||||    
T  44380071 atttgggtgacatagagttgagtgacattggtgatattgaccaatcacaatgttacaatacttataaaatagagagaaacgcaagcat 44379984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 51265448 - 51265507
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  51265448 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 51265507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 40789293 - 40789237
Alignment:
Q  161 ttggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  40789293 ttggtgatattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaa 40789237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 6271705 - 6271764
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||    
T  6271705 gtgacatagagttgggtgatattggtgacattggccaatcacaatgccacaatgcttgtg 6271764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 50384131 - 50384189
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  50384131 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 50384189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 30861909 - 30861850
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||||||||||||| ||| |||||||| |||| ||||||||||||||||||||||||||    
T  30861909 gtgacatagagttggatgatattggtgacattggccaatcacaatgccacaatgcttgtg 30861850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 25818387 - 25818453
Alignment:
Q  151 ttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||||||||||| ||| ||||  ||||||||||| ||||||| |||||||||||||||||||||||    
T  25818387 ttgggtgacattgatgacattggtcaatcacaatgtcacaatgattgtgaaagagagagaaacacaa 25818453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 31430487 - 31430541
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  31430487 ggtgacattgaccaatcacaatgtcacaatgcttatgaaagagagagaaacacaa 31430541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 52028661 - 52028607
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||||||||||    
T  52028661 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaa 52028607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 47404597 - 47404669
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||||||||||||||||||||||||         ||||||||||| ||||||||||||||||||||||||||| |||||||    
T  47404597 gtgacatagagttgggtgacattggt---------caatcacaatgtcacaatgcttgtgaaagagagagaaacccaagcat 47404669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 47661856 - 47661904
Alignment:
Q  151 ttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  47661856 ttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 47661904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 163 - 214
Target Start/End: Original strand, 24006096 - 24006147
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaaca 214  Q
    ||||| |||| |||||||||||| ||||||||||||||||||||||||||||    
T  24006096 ggtgacattggccaatcacaatgacacaatgcttgtgaaagagagagaaaca 24006147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 55090034 - 55090080
Alignment:
Q  175 caatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||    
T  55090034 caatcacaatgtcacaatgcttgtgaaagagagagagacacaagcat 55090080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 38714957 - 38714884
Alignment:
Q  141 tgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaaca 214  Q
    ||||||| || ||||||||||||||||||||  |||||| ||||| ||||||| |||||||||| | |||||||    
T  38714957 tgacatatagatgggtgacattggtgatattacccaatctcaatgtcacaatgtttgtgaaagaaatagaaaca 38714884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 28693955 - 28694003
Alignment:
Q  169 attgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||||||||||||||  ||||||| |||||||||||||||||||||||    
T  28693955 attgaccaatcacaatatcacaatgtttgtgaaagagagagaaacacaa 28694003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 26186149 - 26186090
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||||||||||||||| |||||| ||| |||| |||||||||||  |||||||||||||    
T  26186149 gtgacatagagttgggtaacattgatgacattggccaatcacaatttcacaatgcttgtg 26186090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 187 - 221
Target Start/End: Original strand, 30861824 - 30861858
Alignment:
Q  187 cacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||||||||||||||||||||||||||||||||||    
T  30861824 cacaatgcttgtgaaagagagagaaacacaagcat 30861858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 45591448 - 45591490
Alignment:
Q  175 caatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    |||||| |||| |||||||||||||||||||||||||||||||    
T  45591448 caatcataatgtcacaatgcttgtgaaagagagagaaacacaa 45591490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 2325119 - 2325070
Alignment:
Q  136 ttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatg 185  Q
    ||||||||||||||||| |||||||||| ||| |||||| ||||||||||    
T  2325119 ttgagtgacatagagtttggtgacattgatgacattgacaaatcacaatg 2325070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 185
Target Start/End: Complemental strand, 30710035 - 30709990
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatg 185  Q
    ||||||||||||| |||||||||||||| |||| ||||||||||||    
T  30710035 gtgacatagagttaggtgacattggtgacattggccaatcacaatg 30709990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 47762734 - 47762669
Alignment:
Q  149 agttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaaca 214  Q
    |||||| ||| |||||||| ||||  ||| || |||| ||||||||||||||||||||||||||||    
T  47762734 agttggatgatattggtgacattggtcaaccataatgtcacaatgcttgtgaaagagagagaaaca 47762669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 163
Target Start/End: Original strand, 54716351 - 54716384
Alignment:
Q  130 tagtatttgagtgacatagagttgggtgacattg 163  Q
    ||||||||||||||||||||||||||||||||||    
T  54716351 tagtatttgagtgacatagagttgggtgacattg 54716384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 47762600 - 47762656
Alignment:
Q  129 atagtatttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatg 185  Q
    |||||||||| ||||||||||| || |||| ||| |||| |||||||||||||||||    
T  47762600 atagtatttgggtgacatagagctgagtgatatttgtgacattgaccaatcacaatg 47762656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 26186054 - 26186098
Alignment:
Q  175 caatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||||||||| |||||||||||||||  ||||||||||||||||||    
T  26186054 caatcacaatgtcacaatgcttgtgaa--agagagaaacacaagcat 26186098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 35682169 - 35682228
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||||||||||| ||||| |||||||| |||| |||||||||||| || ||| ||||||    
T  35682169 gtgacatagagttaggtgatattggtgacattggccaatcacaatgtcataatacttgtg 35682228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 197
Target Start/End: Original strand, 44379934 - 44379990
Alignment:
Q  141 tgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttg 197  Q
    ||||||||||||| |||||||||| || |||| ||||| | |||| |||||||||||    
T  44379934 tgacatagagttgagtgacattggcgacattggccaattataatgtcacaatgcttg 44379990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 4e-34; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 5033296 - 5033215
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5033296 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 5033215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 33841594 - 33841675
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  33841594 gtgacatagagttgggtgacattggtgacattgaccaatcacattgtcacaatgcttgtgaaagagagagaaacacaagcat 33841675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 35440972 - 35441053
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  35440972 gtgacttagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 35441053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 10086891 - 10086815
Alignment:
Q  141 tgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  10086891 tgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaa 10086815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 5033164 - 5033223
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5033164 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgccacaatgcttgtg 5033223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 8796557 - 8796476
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||||||||| | ||||| |||||||| |||||||||||| |||| |||||||||||||||||| ||||||||||||||||    
T  8796557 gtgacatagagctaggtgatattggtgacattgaccaatcaaaatgtcacaatgcttgtgaaagatagagaaacacaagcat 8796476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 45191130 - 45191207
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||||||||||||| ||| |||||||| |||||  ||||||||||||||||||||| ||||||||||||||||||||    
T  45191130 gtgacatagagttggatgatattggtgacattgattaatcacaatgccacaatgcttatgaaagagagagaaacacaa 45191207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 33841726 - 33841667
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  33841726 gtgacatagagttgggtgacattggtgacattgaccaatcagaatgccacaatgcttgtg 33841667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 35441104 - 35441045
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  35441104 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 35441045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 5667232 - 5667151
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||||||||||| | |||||||||||| |||| ||||| |||||| || ||||||||||||||||||||||| ||||||||    
T  5667232 gtgacatagagtttgatgacattggtgacattggccaattacaatgtcataatgcttgtgaaagagagagaaatacaagcat 5667151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 8243415 - 8243472
Alignment:
Q  164 gtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8243415 gtgacattgatcaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 8243472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 39851089 - 39851013
Alignment:
Q  141 tgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||||| ||||| ||||||||||||| ||||||||||||||||   | ||||||||||||||||||||||||||||    
T  39851089 tgacataaagttgagtgacattggtgacattgaccaatcacaatattataatgcttgtgaaagagagagaaacacaa 39851013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 127 - 199
Target Start/End: Complemental strand, 43844617 - 43844545
Alignment:
Q  127 ggatagtatttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||| | ||| ||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||    
T  43844617 ggatagcaattgggtgacatagagttggatgacattggtgatattgatcaatcacaatgtcacaatgcttgtg 43844545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 127 - 221
Target Start/End: Complemental strand, 6296753 - 6296659
Alignment:
Q  127 ggatagtatttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||||||||||| |||| |||||||||| ||||||| |||| |||   |||| | |||| |||||| ||||||||||||||||||||||||||||    
T  6296753 ggatagtatttgggtgatatagagttggatgacattagtgacattagtcaattataatgtcacaatacttgtgaaagagagagaaacacaagcat 6296659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 2581828 - 2581887
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||| ||||||||||||| ||| |||| ||||||||||||||||||||||||||    
T  2581828 gtgacatagaattgggtgacattgttgacattggccaatcacaatgccacaatgcttgtg 2581887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 8243523 - 8243464
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||||||||||||||||||||||||||  |||  |||||||||||||||||||||||||    
T  8243523 gtgacatagagttgggtgacattggtgacgttggtcaatcacaatgccacaatgcttgtg 8243464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 22649848 - 22649907
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||||||| ||||||||||||| |||| | ||||||||||||||||||||||||    
T  22649848 gtgacatagagttgagtgacattggtgacattggctaatcacaatgccacaatgcttgtg 22649907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 4958733 - 4958657
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||||||||||| | ||| ||| |||| ||||||||||||||| | |||||| ||||||||||||||||||||||||    
T  4958733 gtgacatagagttagatgatattagtgacattgaccaatcacaa-gtcacaatacttgtgaaagagagagaaacacaa 4958657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 5667100 - 5667158
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgt 198  Q
    ||||||||||||||| |||||||||||| ||||  ||||||||||| ||||||||||||    
T  5667100 gtgacatagagttggatgacattggtgacattggtcaatcacaatgtcacaatgcttgt 5667158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 34229741 - 34229695
Alignment:
Q  175 caatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||||||||  |||||||||||||||||||||||||||||||||||    
T  34229741 caatcacaatatcacaatgcttgtgaaagagagagaaacacaagcat 34229695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 34541829 - 34541887
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| |||| ||||||| |||  |||||||||||||||||||||||||||||||||||    
T  34541829 ggtgacattggccaatcataatatcacaatgcttgtgaaagagagagaaacacaagcat 34541887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 31159972 - 31159912
Alignment:
Q  154 ggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaaca 214  Q
    ||||| |||||||| |||  ||||||| |||| ||||||||||||||||||||||||||||    
T  31159972 ggtgatattggtgacattcgccaatcataatgtcacaatgcttgtgaaagagagagaaaca 31159912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 8796425 - 8796484
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||||||||||| ||||| ||| |||||||||  ||||||||||| |||||||||||||    
T  8796425 gtgacatagagttaggtgatatttgtgatattggtcaatcacaatgtcacaatgcttgtg 8796484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 212
Target Start/End: Original strand, 35031639 - 35031689
Alignment:
Q  162 tggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaa 212  Q
    |||||| ||||| ||||||||||| | ||||||||||||||||||||||||    
T  35031639 tggtgacattgatcaatcacaatgtcgcaatgcttgtgaaagagagagaaa 35031689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 43844475 - 43844553
Alignment:
Q  141 tgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||||||||||||||||| |||| ||||||||   ||||| |||| ||  |||||||||  ||||||||||||||||||||    
T  43844475 tgacatagagttgggtgatattgatgatattggttaatcataatgtcaggatgcttgtg--agagagagaaacacaagcat 43844553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 45191262 - 45191203
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||||||||||||| ||| |||||||| |||||||||||| ||||  |||||| |||||    
T  45191262 gtgacatagagttggatgatattggtgacattgaccaatcaaaatgttacaatgtttgtg 45191203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 34229629 - 34229703
Alignment:
Q  125 ttggatagtatttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||| | ||| ||||||||||||||||||||||| |||| ||    ||||||||||| || ||||||||||    
T  34229629 ttggatagcacttgtgtgacatagagttgggtgacattagtgacatgagtcaatcacaatgtcagaatgcttgtg 34229703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 37618750 - 37618802
Alignment:
Q  160 attggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaa 212  Q
    |||||||| |||| |||||||||||| |||||| ||||| | |||||||||||    
T  37618750 attggtgacattggccaatcacaatgtcacaatccttgtaagagagagagaaa 37618802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 4e-34; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 16971279 - 16971198
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16971279 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 16971198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 2953325 - 2953244
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  2953325 gtgacatagagttgggtgacattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 2953244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 3899974 - 3899893
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3899974 gtgacttagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 3899893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 29699502 - 29699421
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||||||||||||||||| |||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  29699502 gtgacatagagttgggtgatattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 29699421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 134 - 221
Target Start/End: Original strand, 30117825 - 30117912
Alignment:
Q  134 atttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||| ||||||||||||||||||    
T  30117825 atttgggtgatatagagttgggtgacattggtgatattgaccaatcacaatgtcacaatgtttatgaaaaagagagaaacacaagcat 30117912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 12913950 - 12913860
Alignment:
Q  128 gatagtatttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaag 218  Q
    |||| |||||| |||||||||||||||||||||||||||||||||  ||||||||||| || ||||||||||||||||||||| |||||||    
T  12913950 gataatatttgtgtgacatagagttgggtgacattggtgatattggtcaatcacaatgtcataatgcttgtgaaagagagagatacacaag 12913860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 2093940 - 2094021
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||||| || ||||||||||||||||||||||||||||||||    
T  2093940 gtgacatagagttgggtgatattggtgacattgatcaatcacaatgtcataatgcttgtgaaagagagagaaacacaagcat 2094021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 19655293 - 19655216
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    |||||||||||||| ||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||    
T  19655293 gtgacatagagttgagtgacattggtgacattgtccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaa 19655216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 291096 - 291158
Alignment:
Q  136 ttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgt 198  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  291096 ttgagtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgt 291158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 291232 - 291151
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||| |||||||||||| ||||| ||||||||    
T  291232 gtgatatagagttgggtgacattggtgacattgatcaatcacaatgtcacaatgtttgtgaaagagaaagaaatacaagcat 291151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 133 - 218
Target Start/End: Complemental strand, 28819059 - 28818974
Alignment:
Q  133 tatttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaag 218  Q
    |||||| |||||||||||||| |||| |||||||| ||||  |||||| |||| |||||||||||||||||||||||||| |||||    
T  28819059 tatttgggtgacatagagttgagtgatattggtgacattggtcaatcataatgtcacaatgcttgtgaaagagagagaaatacaag 28818974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 19655161 - 19655220
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||    
T  19655161 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgtttgtg 19655220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 16439250 - 16439192
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  16439250 ggtgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 16439192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 2356406 - 2356328
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||||||||||||| |||||||||||| |||| |||||||| ||| |||||||||| ||||  ||||||||||||||||||    
T  2356406 gtgacatagagttggatgacattggtgacattggccaatcac-atgtcacaatgcttatgaa--agagagaaacacaagcat 2356328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 30117962 - 30117904
Alignment:
Q  141 tgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||||||| |||||||||||||||||  |||||| ||||||||||||||||||    
T  30117962 tgacatagagttggatgacattggtgatattggtcaatcataatgccacaatgcttgtg 30117904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 220
Target Start/End: Complemental strand, 26662535 - 26662454
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaa-tcacaatgccacaatgcttgtgaaagagagagaaacacaagca 220  Q
    ||||| ||||||||||||| |||||||| ||||  ||| |||||||| |||||| ||||||||| |||||||||||||||||    
T  26662535 gtgacttagagttgggtgatattggtgacattggtcaaatcacaatgtcacaatacttgtgaaaaagagagaaacacaagca 26662454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 220
Target Start/End: Complemental strand, 26934130 - 26934049
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaa-tcacaatgccacaatgcttgtgaaagagagagaaacacaagca 220  Q
    ||||| ||||||||||||| |||||||| ||||  ||| |||||||| |||||| ||||||||| |||||||||||||||||    
T  26934130 gtgacttagagttgggtgatattggtgacattggtcaaatcacaatgtcacaatacttgtgaaaaagagagaaacacaagca 26934049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 29699381 - 29699429
Alignment:
Q  151 ttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  29699381 ttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 29699429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 19598335 - 19598394
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||||||||||||||| |||||||||| ||||  |||||||||| ||||||||||||||    
T  19598335 gtgacatagagttgggtaacattggtgacattggtcaatcacaataccacaatgcttgtg 19598394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 3180086 - 3180144
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| ||||| |||||| |||| ||||||| |||||||||||||||||||||||||||    
T  3180086 ggtgacattgatcaatcataatgtcacaatgtttgtgaaagagagagaaacacaagcat 3180144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 16802555 - 16802502
Alignment:
Q  164 gtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    |||| |||||||||||| |||| |||||||||||| ||||||||||||||||||    
T  16802555 gtgacattgaccaatcagaatgtcacaatgcttgtaaaagagagagaaacacaa 16802502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 38134404 - 38134457
Alignment:
Q  168 tattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| |||||||||||| ||||||||| |||||||||| ||||||||||||||    
T  38134404 tattggccaatcacaatgtcacaatgctagtgaaagagaaagaaacacaagcat 38134457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 1638460 - 1638519
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||| |||||||||||||| ||| ||||||||| |||||||||||| ||||||| |||||    
T  1638460 gtgatatagagttgggtgatatttgtgatattggccaatcacaatgtcacaatgtttgtg 1638519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 12913806 - 12913865
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||| ||||| ||||||||||||| |||| |||||||||||| |||||| ||||||    
T  12913806 gtgacatatagttgagtgacattggtgacattggccaatcacaatgtcacaattcttgtg 12913865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 19272270 - 19272337
Alignment:
Q  141 tgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagaga 208  Q
    ||||||||||||| |||| |||||||| ||||||||||||||||  || |||  ||||||||||||||    
T  19272270 tgacatagagttgagtgatattggtgaaattgaccaatcacaattacataatatttgtgaaagagaga 19272337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 194
Target Start/End: Original strand, 13312267 - 13312321
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgc 194  Q
    ||||||||||||| |||||||||| ||| ||||| ||||||||||| ||||||||    
T  13312267 gtgacatagagttaggtgacattgatgacattgatcaatcacaatgtcacaatgc 13312321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 19598443 - 19598386
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| ||| |||||||| |||| || ||||||||||||||||||||||||||||||||    
T  19598443 ggtgacattaaccaatcataatgtca-aatgcttgtgaaagagagagaaacacaagcat 19598386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 194
Target Start/End: Complemental strand, 32485684 - 32485630
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgc 194  Q
    |||||| ||||||||||||||||||||| ||||| ||||||||||  ||||||||    
T  32485684 gtgacacagagttgggtgacattggtgacattgatcaatcacaatatcacaatgc 32485630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 3180191 - 3180136
Alignment:
Q  143 acatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||||| | |||||||||| ||||  |||||||||||||||||||||||||    
T  3180191 acatagagttgg-taacattggtgacattggtcaatcacaatgccacaatgcttgtg 3180136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 192
Target Start/End: Original strand, 31147137 - 31147193
Alignment:
Q  137 tgagtgacatagagttgggtgacattggtgatattgaccaatcac-aatgccacaat 192  Q
    ||||||||||||||||| ||||||||| | |||||| |||||||| |||||||||||    
T  31147137 tgagtgacatagagttgagtgacattgataatattggccaatcacaaatgccacaat 31147193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 151 - 202
Target Start/End: Complemental strand, 7009452 - 7009401
Alignment:
Q  151 ttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaa 202  Q
    |||| |||||||||||||||||  ||||||||||  ||||||||||||||||    
T  7009452 ttggatgacattggtgatattggtcaatcacaatatcacaatgcttgtgaaa 7009401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 39031297 - 39031242
Alignment:
Q  129 atagtatttgagtgacatagagttgggtgacattggtgatattgaccaatcacaat 184  Q
    ||||||||||  ||||||||||| ||||||||||||||| | ||| ||||||||||    
T  39031297 atagtatttggatgacatagagtggggtgacattggtgacactgatcaatcacaat 39031242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 16439146 - 16439200
Alignment:
Q  145 atagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||||| | |||||||| ||||  ||||||||||| |||||||||||||    
T  16439146 atagagttgggtaatattggtgacattggtcaatcacaatgtcacaatgcttgtg 16439200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 173
Target Start/End: Original strand, 39777054 - 39777087
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattga 173  Q
    |||||||||||||||||||||||||||| |||||    
T  39777054 gtgacatagagttgggtgacattggtgacattga 39777087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 217
Target Start/End: Complemental strand, 228484 - 228408
Alignment:
Q  141 tgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||||| |||||||| | |||| ||| |||   ||||||||||| || ||||||||| ||||||||| ||||||||    
T  228484 tgacataaagttgggtaatattgatgagatttgtcaatcacaatgtcaaaatgcttgtaaaagagagaaaaacacaa 228408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 199
Target Start/End: Original strand, 3899865 - 3899901
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  3899865 ggtgacattggccaatcacaatgccacaatgcttgtg 3899901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 208
Target Start/End: Original strand, 14167175 - 14167223
Alignment:
Q  160 attggtgatattgaccaatcacaatgccacaatgcttgtgaaagagaga 208  Q
    ||||||||  ||||| |||||||||| |||||| |||||||||||||||    
T  14167175 attggtgactttgacgaatcacaatgtcacaatccttgtgaaagagaga 14167223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 199
Target Start/End: Original strand, 16971170 - 16971206
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  16971170 ggtgacattggccaatcacaatgccacaatgcttgtg 16971206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 184
Target Start/End: Original strand, 22083001 - 22083045
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaat 184  Q
    |||||||||||||| ||||||||  ||| ||||||||||||||||    
T  22083001 gtgacatagagttgtgtgacattaatgacattgaccaatcacaat 22083045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 4e-34; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 5995504 - 5995423
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5995504 gtgacatagagttggatgacattggtgacattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 5995423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 48993920 - 48994001
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  48993920 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 48994001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 134 - 221
Target Start/End: Complemental strand, 15220952 - 15220865
Alignment:
Q  134 atttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||    
T  15220952 atttgggtgacatagagttgggtgacattggtgatattggccaatcacaatctcacaatgcttgtgaaagagagagaaacacaagcat 15220865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 141 - 221
Target Start/End: Original strand, 29179601 - 29179681
Alignment:
Q  141 tgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29179601 tgacatagagttgggtgacattggtgacactgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 29179681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 127 - 217
Target Start/End: Complemental strand, 29371516 - 29371426
Alignment:
Q  127 ggatagtatttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    |||||| | ||| ||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29371516 ggatagcacttgtgtgacatagagctaggtgacattggtgatattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaa 29371426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 17127567 - 17127648
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||| |||||||| ||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17127567 gtgatatagagttaggtgacattagtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 17127648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 32540755 - 32540832
Alignment:
Q  144 catagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||||||||||||||||||||||  |||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  32540755 catagagttgggtgacattggtggcattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 32540832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 48994052 - 48993993
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  48994052 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgccacaatgcttgtg 48993993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 33219705 - 33219627
Alignment:
Q  143 acatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||||||||||| |||||||||||| ||||| ||||||||||| || ||||||||||||||||||| ||||||||||||    
T  33219705 acatagagttggatgacattggtgacattgatcaatcacaatgtcataatgcttgtgaaagagagaaaaacacaagcat 33219627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 29179732 - 29179673
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  29179732 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 29179673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 44706926 - 44706860
Alignment:
Q  133 tatttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||| |||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||    
T  44706926 tatttgggtgacatagagttgggtgacattggtgacattggccaatcacaatgccgcaatgcttgtg 44706860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 49444916 - 49444995
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||||||||||||||||||||||||||| || || |||||||||||  ||||||||||||  ||||||||||||||||||||    
T  49444916 gtgacatagagttgggtgacattggtgacatcgatcaatcacaatgttacaatgcttgtg--agagagagaaacacaagcat 49444995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 9157313 - 9157372
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||    
T  9157313 gtgacatagagttgggtgacattggtaacattgaccaatcacaatgtcacaatgcttgtg 9157372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 21630045 - 21630104
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  21630045 gtgacataaagttgggtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 21630104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 46932000 - 46932059
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||    
T  46932000 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgtttgtg 46932059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 741528 - 741586
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  741528 ggtgacattgcccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 741586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 1819515 - 1819573
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  1819515 ggtgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 1819573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 127 - 217
Target Start/End: Complemental strand, 4609135 - 4609054
Alignment:
Q  127 ggatagtatttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    |||||||| ||| ||||||||||||||||||||||||||         ||||||||||| |||||||||||||||||||||||||||||||    
T  4609135 ggatagtacttgtgtgacatagagttgggtgacattggt---------caatcacaatgtcacaatgcttgtgaaagagagagaaacacaa 4609054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 28395634 - 28395699
Alignment:
Q  134 atttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||| || ||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||    
T  28395634 atttgggtaacatagagttgagtgacattggtgacattgaccaatcacaatgtcacaatgcttgtg 28395699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 192
Target Start/End: Complemental strand, 36290555 - 36290490
Alignment:
Q  127 ggatagtatttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaat 192  Q
    |||||||| ||| |||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  36290555 ggatagtacttgggtgacatagagttgggtgacattggtggcattgaccaatcacaatgtcacaat 36290490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 37155049 - 37155108
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||||||||||| |||||||||||||| |||| |||||||||||| |||||||||||||    
T  37155049 gtgacatagagtttggtgacattggtgacattggccaatcacaatgtcacaatgcttgtg 37155108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 44706809 - 44706868
Alignment:
Q  163 ggtgatattgaccaatcacaa-tgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44706809 ggtgacattggccaatcacaaatgccacaatgcttgtgaaagagagagaaacacaagcat 44706868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 45728294 - 45728349
Alignment:
Q  144 catagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||||||||||||| |||||||||||||||||||||||||  |||||||||||||    
T  45728294 catagagttgggtgatattggtgatattgaccaatcacaatatcacaatgcttgtg 45728349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 34062321 - 34062263
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| ||||||||||||||||| ||||||| |||||||||||||||||||| ||||||    
T  34062321 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacataagcat 34062263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 37155158 - 37155100
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| |||| |||||||||||| |||||| ||||||||||||||||||||||||||||    
T  37155158 ggtgacattggccaatcacaatgtcacaatacttgtgaaagagagagaaacacaagcat 37155100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 46932116 - 46932064
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatg 193  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  46932116 gtgacatagagttgg-tgacattggtgacattgaccaatcacaatgccacaatg 46932064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 28928803 - 28928859
Alignment:
Q  161 ttggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||||| |||| |||||||||||| |||| ||||||||||||||||||||||||||    
T  28928803 ttggtgacattggccaatcacaatgtcacagtgcttgtgaaagagagagaaacacaa 28928859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 46333978 - 46334030
Alignment:
Q  169 attgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||| |||||||||||| |||||||||||||||||||||| ||||||||||||    
T  46333978 attggccaatcacaatgtcacaatgcttgtgaaagagagaaaaacacaagcat 46334030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 48498529 - 48498473
Alignment:
Q  161 ttggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||||| |||||||||||||||||  || |||||||||||||||||||||||||||    
T  48498529 ttggtgacattgaccaatcacaatgttaccatgcttgtgaaagagagagaaacacaa 48498473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 1091679 - 1091620
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||| ||||||| |||||    
T  1091679 gtgacatagagttgggtgatattggtgactttgaccaatcacaatgtcacaatgtttgtg 1091620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 5995372 - 5995431
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||||||||||| | |||||||||| | |||| ||||||||||||||||||||||||||    
T  5995372 gtgacatagagtttgatgacattggtaacattggccaatcacaatgccacaatgcttgtg 5995431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 32540883 - 32540824
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||| |||| |||||||||||| |||||||||||||||||  ||||||||||||    
T  32540883 gtgacatagaattggatgacattggtgacattgaccaatcacaatgttacaatgcttgtg 32540824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 38674531 - 38674587
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||||||||| |||||||||||| |||||||||||||||  ||||||||||||||||||    
T  38674531 ggtgatattggccaatcacaatgtcacaatgcttgtgaa--agagagaaacacaagcat 38674587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 1091582 - 1091624
Alignment:
Q  175 caatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  1091582 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaa 1091624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 45728387 - 45728341
Alignment:
Q  175 caatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||    
T  45728387 caatcacaatgtcataatgcttgtgaaagagagagaaacacaagcat 45728341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 8337875 - 8337931
Alignment:
Q  161 ttggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||||| ||||  ||||||||||| ||||||| |||||||||||||||||||||||    
T  8337875 ttggtgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacacaa 8337931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 9157416 - 9157364
Alignment:
Q  169 attgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| ||||||||||  ||||||||||| |||||||||||||||||||||||    
T  9157416 attgatcaatcacaatatcacaatgcttgagaaagagagagaaacacaagcat 9157364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 17127699 - 17127640
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||| |||||||| ||||||||| |||| |||||||||||| |||| |||||||||||||    
T  17127699 gtgatatagagttaggtgacattagtgacattgaccaatcaaaatgtcacaatgcttgtg 17127640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 217
Target Start/End: Complemental strand, 47303495 - 47303453
Alignment:
Q  175 caatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||||||||| ||||||| |||||||||||||||||||||||    
T  47303495 caatcacaatgtcacaatgtttgtgaaagagagagaaacacaa 47303453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 199
Target Start/End: Original strand, 4608986 - 4609058
Alignment:
Q  127 ggatagtatttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||| | ||| |||| || |||||||||||||| ||||| ||||||| ||||||||| ||||||| |||||    
T  4608986 ggatagcacttgtgtgatatggagttgggtgacatcggtgacattgacccatcacaatgtcacaatgtttgtg 4609058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 48498418 - 48498477
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||||||||||||||||||||| |||| ||||  |||||| ||| |||||||| |||||    
T  48498418 gtgacatagagttgggtgacatttgtgacattggtcaatcataataccacaatgtttgtg 48498477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 217
Target Start/End: Original strand, 36290457 - 36290487
Alignment:
Q  187 cacaatgcttgtgaaagagagagaaacacaa 217  Q
    |||||||||||||||||||||||||||||||    
T  36290457 cacaatgcttgtgaaagagagagaaacacaa 36290487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 48604985 - 48605031
Alignment:
Q  175 caatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||||||||| ||||||  ||||||||||||||||||| |||||||    
T  48604985 caatcacaatgtcacaatatttgtgaaagagagagaaacgcaagcat 48605031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 19711206 - 19711251
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtgaaagagaga 208  Q
    ||||| |||||||||||||||||  ||||||| |||||||||||||    
T  19711206 ggtgacattgaccaatcacaatgttacaatgcatgtgaaagagaga 19711251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 2573182 - 2573226
Alignment:
Q  164 gtgatattgaccaatcacaatgccacaatgcttgtgaaagagaga 208  Q
    ||||||||||| |||||||||  |||||||||||||||| |||||    
T  2573182 gtgatattgactaatcacaatatcacaatgcttgtgaaaaagaga 2573226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 199
Target Start/End: Complemental strand, 8337963 - 8337927
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||| ||||||||||||||||||||||||| |||||    
T  8337963 ggtgacattgaccaatcacaatgccacaatgtttgtg 8337927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 199
Target Start/End: Complemental strand, 49445023 - 49444987
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  49445023 ggtgacattggccaatcacaatgccacaatgcttgtg 49444987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 29508693 - 29508775
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcac-aatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29508693 gtgacatagagttgggtgacattggtgacattgaccaatcacaaatgccacaatgcttgtgaaagagagagaaacacaagcat 29508775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 6217227 - 6217304
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6217227 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 6217304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 16514559 - 16514478
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  16514559 gtgacatagagttgggtgagattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 16514478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 127 - 217
Target Start/End: Original strand, 14470582 - 14470672
Alignment:
Q  127 ggatagtatttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    |||||| | ||| |||||||||||||||||||||||||||| |||||||||||||||||   |||||||||||||||||||||||||||||    
T  14470582 ggatagcacttgtgtgacatagagttgggtgacattggtgacattgaccaatcacaatgttgcaatgcttgtgaaagagagagaaacacaa 14470672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 6722086 - 6722005
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||    
T  6722086 gtgacatagagttggttgacattagtgatattggccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaagcat 6722005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 14229356 - 14229437
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||||||||||| |||||||||||||| ||||  ||||||||||| |||||||||||||||||||||||||||||||||||    
T  14229356 gtgacatagagttcggtgacattggtgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 14229437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 37961841 - 37961764
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    |||||||||||||| |||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37961841 gtgacatagagttgagtgatatttgtgacattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 37961764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 38933722 - 38933641
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||||||||||||||||||||||||||  ||| ||||||| |||| |||||||||||||||||||||||||||||||||||    
T  38933722 gtgacatagagttgggtgacattggtgacgttggccaatcataatgtcacaatgcttgtgaaagagagagaaacacaagcat 38933641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 140 - 198
Target Start/End: Complemental strand, 9173116 - 9173058
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgt 198  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9173116 gtgacatagagttgggtgacattggtgatattggccaatcacaatgccacaatgcttgt 9173058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 136 - 200
Target Start/End: Complemental strand, 33018684 - 33018620
Alignment:
Q  136 ttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtga 200  Q
    |||| ||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  33018684 ttgaatgacatagagttgggtgacattggtgatattggtcaatcacaatgtcacaatgcttgtga 33018620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 14892401 - 14892318
Alignment:
Q  134 atttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||| ||||||||||||||| |||||||||||| ||||| |||||||||||  ||||| ||| ||||||||||||||| ||||    
T  14892401 atttgggtgacatagagttggatgacattggtgacattgatcaatcacaatgttacaatacttatgaaagagagagaaagacaa 14892318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 24116055 - 24115974
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||||||||||||||||| |||| |||||||||  ||||||||||| | ||||||||||||||||| | |||||||| ||||    
T  24116055 gtgacatagagttgggtgccattagtgatattggtcaatcacaatgtcgcaatgcttgtgaaagagtgtgaaacacaggcat 24115974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 16514427 - 16514486
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||||||||||||||||||||| |||| |||||||| |||||| ||||||||||    
T  16514427 gtgacatagagttgggtgacattggtgacattggccaatcactatgccataatgcttgtg 16514486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 29508826 - 29508767
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||||||||||||||||| |||||||| |||| |||||||||||||| |||||||||||    
T  29508826 gtgacatagagttgggtgatattggtgacattggccaatcacaatgccgcaatgcttgtg 29508767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 221
Target Start/End: Complemental strand, 2828696 - 2828638
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| |||| |||||||||||| |||||||||| ||||||||||||||||||||||||    
T  2828696 ggtgacattggccaatcacaatgtcacaatgcttctgaaagagagagaaacacaagcat 2828638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 29925580 - 29925650
Alignment:
Q  147 agagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    |||||||||||| |||||||| |||| ||  |||||||| || ||||||||||||||||||||||||||||    
T  29925580 agagttgggtgatattggtgacattggcccctcacaatgtcagaatgcttgtgaaagagagagaaacacaa 29925650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 15011391 - 15011338
Alignment:
Q  164 gtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    |||| |||| |||||||||||| |||||||||||||||||||||||||||||||    
T  15011391 gtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaa 15011338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 208
Target Start/End: Complemental strand, 32545936 - 32545855
Alignment:
Q  127 ggatagtatttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagaga 208  Q
    |||||| | ||| |||||||||||||  ||||||||||||| |||| ||||||| |||| |||||||||| |||||||||||    
T  32545936 ggatagcacttgggtgacatagagtttagtgacattggtgacattggccaatcataatgtcacaatgcttatgaaagagaga 32545855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 37762028 - 37762085
Alignment:
Q  164 gtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||| ||||||||||||||||| | |||||||||||||||||| ||||||||||||||    
T  37762028 gtgacattgaccaatcacaatgtcgcaatgcttgtgaaagagaaagaaacacaagcat 37762085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 15011294 - 15011342
Alignment:
Q  151 ttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||    
T  15011294 ttgggtgacattggtgatattggccaatcacaatgccacaatgtttgtg 15011342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 221
Target Start/End: Complemental strand, 2894095 - 2894017
Alignment:
Q  134 atttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| ||||||||||||||| ||||||||||         |||||||| || |||||||||||||||||||||||||| ||||||||    
T  2894095 atttgggtgacatagagttggatgacattggt---------caatcacagtgtcacaatgcttgtgaaagagagagaaatacaagcat 2894017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 45213935 - 45213892
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaa 183  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  45213935 gtgacatagagttgggtgacattgatgacattgaccaatcacaa 45213892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 199
Target Start/End: Original strand, 6721965 - 6722013
Alignment:
Q  151 ttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||| |||||||||||| ||||||||||||||||  |||||||||||||    
T  6721965 ttggatgacattggtgacattgaccaatcacaatatcacaatgcttgtg 6722013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 199
Target Start/End: Original strand, 38933613 - 38933649
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||| |||||||||||||||||||||||||||||||    
T  38933613 ggtgacattgaccaatcacaatgccacaatgcttgtg 38933649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 8534256 - 8534204
Alignment:
Q  165 tgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||||||  |||| |||||| |||||| ||||||||| ||||||||||||||    
T  8534256 tgatattggtcaattacaatgtcacaattcttgtgaaatagagagaaacacaa 8534204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 7050 - 7131
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||||    
T  7050 gtgacatagagttgggtgacattggtgatattagccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 7131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 7181 - 7123
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||| |||||||||||||    
T  7181 gtgacatagagttgg-tgacattggtgacattggccaatcacaatgtcacaatgcttgtg 7123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 1e-31; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 11017004 - 11016923
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  11017004 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaagcat 11016923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 42628430 - 42628349
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||| ||||||    
T  42628430 gtgacatagagttgggtgacattggtgatattggccaatcacaatgtcccaatgcttgtgaaagagagagaaacataagcat 42628349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 48000869 - 48000795
Alignment:
Q  143 acatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  48000869 acatagagttgggtgacattggtgacattgaccaatcacaatgccacaatgtctgtgaaagagagagaaacacaa 48000795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 38975940 - 38975859
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||||||||||| |||||||||||||| ||||| |||| | ||||||||||||||||||||||||||||||||||||||||    
T  38975940 gtgacatagagttaggtgacattggtgacattgatcaattataatgccacaatgcttgtgaaagagagagaaacacaagcat 38975859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 140 - 212
Target Start/End: Original strand, 48000697 - 48000769
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaa 212  Q
    ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||    
T  48000697 gtgacattgagttgggtgacattggtgacattgatcaatcacaatgccacaatgcttgtgaaagagagagaaa 48000769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 140 - 221
Target Start/End: Complemental strand, 4290680 - 4290599
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||||||| ||||||||||||||||||| |||| |||||||||||| |||||| |||||||||||||||||||||| |||||    
T  4290680 gtgacatacagttgggtgacattggtgacattggccaatcacaatgtcacaattcttgtgaaagagagagaaacacgagcat 4290599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 15027661 - 15027600
Alignment:
Q  156 tgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15027661 tgacattggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaa 15027600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 41018363 - 41018307
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgctt 196  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41018363 gtgacatagagttgggtgacattggtgacattgaccaatcacaatgccacaatgctt 41018307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 11016872 - 11016931
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  11016872 gtgacatagagttgggtgacattggtgacattggccaatcacaatgccacaatgcttgtg 11016931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 29053338 - 29053394
Alignment:
Q  161 ttggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||    
T  29053338 ttggtgacattggccaatcacaatgcctcaatgcttgtgaaagagagagaaacacaa 29053394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 34854719 - 34854775
Alignment:
Q  161 ttggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  34854719 ttggtgacattggccaatcacaatgccacaatgcttgtgaaagagatagaaacacaa 34854775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 195
Target Start/End: Original strand, 4290548 - 4290603
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgct 195  Q
    ||||||||||||||||||| |||||||||||||  |||||||||||||||||||||    
T  4290548 gtgacatagagttgggtgatattggtgatattggtcaatcacaatgccacaatgct 4290603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 174 - 217
Target Start/End: Original strand, 7671948 - 7671991
Alignment:
Q  174 ccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  7671948 ccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 7671991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 34854830 - 34854771
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||||||||||||||||||||| ||||  ||||||||||||||||||| |||||    
T  34854830 gtgacatagagttgggtgacattggtgacattggtcaatcacaatgccacaatgtttgtg 34854771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 38975808 - 38975867
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||||||||||||||||||| | ||||  |||||||||||||||||||||||||    
T  38975808 gtgacatagagttgggtgacattggtaacattggtcaatcacaatgccacaatgcttgtg 38975867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 45231985 - 45231929
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgctt 196  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||  |||||||||    
T  45231985 gtgacatagagttgggtgacattggtgacattggccaatcacaatgttacaatgctt 45231929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 41018254 - 41018312
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| |||| |||||||||||| | |||||||||||||||||||||||||| ||||||    
T  41018254 ggtgacattggccaatcacaatgtcccaatgcttgtgaaagagagagaaacataagcat 41018312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 206
Target Start/End: Complemental strand, 41945990 - 41945924
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagaga 206  Q
    |||||||| ||||| ||||||||||| ||||||  |||||||||||  |||||||||||||||||||    
T  41945990 gtgacataaagttgagtgacattggtaatattggtcaatcacaatgttacaatgcttgtgaaagaga 41945924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 199
Target Start/End: Original strand, 15027548 - 15027604
Alignment:
Q  143 acatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||||  |||||||||||| |||||||||||||||| |||||||| |||||    
T  15027548 acatagagttgtttgacattggtgacattgaccaatcacaataccacaatgtttgtg 15027604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 27028731 - 27028790
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||| ||||| ||||||||||||| ||||  ||||||||||| |||||||||||||    
T  27028731 gtgacatatagttgagtgacattggtgacattggacaatcacaatgtcacaatgcttgtg 27028790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 27028831 - 27028873
Alignment:
Q  175 caatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  27028831 caatcacaatgtcacaatgcttctgaaagagagagaaacacaa 27028873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 4649452 - 4649374
Alignment:
Q  136 ttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagaga--gagaaacacaagcat 221  Q
    ||||||||||||||||| ||||||||||||         ||||||||||| ||| ||||||||||||||||  |||||||||||||||    
T  4649452 ttgagtgacatagagtttggtgacattggt---------caatcacaatgtcacgatgcttgtgaaagagagagagaaacacaagcat 4649374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 199
Target Start/End: Complemental strand, 22764820 - 22764776
Alignment:
Q  155 gtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||||||||||||||| |||||||||||| ||||||| |||||    
T  22764820 gtgacattggtgatattggccaatcacaatgtcacaatgtttgtg 22764776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 10419556 - 10419515
Alignment:
Q  177 atcacaatgccacaatgcttgtgaaagagagagaaacacaag 218  Q
    ||||||||| |||||  |||||||||||||||||||||||||    
T  10419556 atcacaatgtcacaaaacttgtgaaagagagagaaacacaag 10419515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 163
Target Start/End: Complemental strand, 25001420 - 25001391
Alignment:
Q  134 atttgagtgacatagagttgggtgacattg 163  Q
    ||||||||||||||||||||||||||||||    
T  25001420 atttgagtgacatagagttgggtgacattg 25001391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 196
Target Start/End: Original strand, 42628321 - 42628354
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgctt 196  Q
    ||||| ||||||||||||||||||||||||||||    
T  42628321 ggtgacattgaccaatcacaatgccacaatgctt 42628354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 214
Target Start/End: Original strand, 30217503 - 30217531
Alignment:
Q  186 ccacaatgcttgtgaaagagagagaaaca 214  Q
    |||||||||||||||||||||||||||||    
T  30217503 ccacaatgcttgtgaaagagagagaaaca 30217531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 66; Significance: 2e-29; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 49706 - 49787
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  49706 gtgacatagagttgggtgacattgatgacattgaccaatcacaatgtcacaatgcttgtgaaagaaagagaaacacaagcat 49787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 199
Target Start/End: Complemental strand, 49815 - 49779
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||| |||| ||||||||||||||||||||||||||    
T  49815 ggtgacattggccaatcacaatgccacaatgcttgtg 49779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 2e-29; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 24618600 - 24618685
Alignment:
Q  136 ttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||| || ||||||| ||||||||||||||||||||||||    
T  24618600 ttgagtgacatagagttgggtgacattggtgacattgatcaatcacaatgtcataatgcttatgaaagagagagaaacacaagcat 24618685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 143 - 221
Target Start/End: Complemental strand, 12343232 - 12343154
Alignment:
Q  143 acatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||||||||||||||| |||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  12343232 acatagagttgggtgagattggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 12343154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 134 - 221
Target Start/End: Complemental strand, 13043598 - 13043511
Alignment:
Q  134 atttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| |||||||||||||| |||| |||||||| |||| | |||||||||  |||||||||||||||||||||||||||||||||||    
T  13043598 atttgggtgacatagagttgagtgatattggtgacattggctaatcacaatatcacaatgcttgtgaaagagagagaaacacaagcat 13043511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 17751037 - 17750960
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||||||||||||||||| |||| ||| |||| || ||||||||| |||||||||||||||||||||| ||| ||||    
T  17751037 gtgacatagagttgggtgatattgatgacattggccgatcacaatgtcacaatgcttgtgaaagagagataaatacaa 17750960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 161 - 221
Target Start/End: Original strand, 10521873 - 10521933
Alignment:
Q  161 ttggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||||| |||| |||||||||||| |||||||||| ||||||||||||||||||||||||    
T  10521873 ttggtgacattggccaatcacaatgtcacaatgcttatgaaagagagagaaacacaagcat 10521933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 24975755 - 24975815
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtga 200  Q
    ||||||||||||||| |||||||||||| ||||  ||||||||||||||||||||||||||    
T  24975755 gtgacatagagttggctgacattggtgacattggtcaatcacaatgccacaatgcttgtga 24975815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 221
Target Start/End: Original strand, 551203 - 551249
Alignment:
Q  175 caatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||    
T  551203 caatcacaatgccacaatgtttgtgaaagagagagaaacacaagcat 551249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 551307 - 551241
Alignment:
Q  133 tatttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    |||||| |||||||||| |||| ||| |||||||| |||| ||||||||||||||||||||||||||    
T  551307 tatttgggtgacatagaattggatgatattggtgacattggccaatcacaatgccacaatgcttgtg 551241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 24587464 - 24587523
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtg 199  Q
    ||||||||||||||||||||||| |||| ||||  ||||||||||| |||||||||||||    
T  24587464 gtgacatagagttgggtgacattagtgacattggtcaatcacaatgtcacaatgcttgtg 24587523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 221
Target Start/End: Original strand, 2315330 - 2315388
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| ||||| ||||||||||| ||||||| ||||||||||||| |||||| ||||||    
T  2315330 ggtgacattgatcaatcacaatgtcacaatgtttgtgaaagagagcgaaacataagcat 2315388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 7384491 - 7384552
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaa 201  Q
    |||| |||||||||| ||||||| |||| ||||||||||||||||| || |||| |||||||    
T  7384491 gtgatatagagttggatgacattagtgacattgaccaatcacaatgtcataatgtttgtgaa 7384552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 172
Target Start/End: Original strand, 13043444 - 13043483
Alignment:
Q  133 tatttgagtgacatagagttgggtgacattggtgatattg 172  Q
    |||||| |||||||||| ||||||||||||||||||||||    
T  13043444 tatttgggtgacatagaattgggtgacattggtgatattg 13043483  T

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Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 24587558 - 24587515
Alignment:
Q  178 tcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    |||||||| |||||||||||||||| || |||||||||||||||    
T  24587558 tcacaatgtcacaatgcttgtgaaaaagcgagaaacacaagcat 24587515  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 17750891 - 17750963
Alignment:
Q  125 ttggatagtatttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgt 198  Q
    |||||||| | ||| ||||||||||||||  |||||||||||| ||||  ||||||||||| ||||||| ||||    
T  17750891 ttggatagcacttgtgtgacatagagttga-tgacattggtgacattggtcaatcacaatgtcacaatgtttgt 17750963  T

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Target: scaffold0180 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 128 - 217
Target Start/End: Original strand, 19113 - 19202
Alignment:
Q  128 gatagtatttgagtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||| ||||| |||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||| |||| ||||||||||||    
T  19113 gatagcatttgtgtgacatagagttgggtgacattgatgatattgatcaatcacaatgtcacaatgcttgtggaagaaagagaaacacaa 19202  T

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Target: scaffold0161 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 140 - 221
Target Start/End: Original strand, 27223 - 27304
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||| || ||| ||||||||||||||||||||| ||||||    
T  27223 gtgacatagagttgggtgacattagtgatattggccaatcacaatgtcataattcttgtgaaagagagagaaacagaagcat 27304  T

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Target: scaffold0161; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 27355 - 27299
Alignment:
Q  140 gtgacatagagttgggtgacattggtgatattgaccaatcacaatgccacaatgctt 196  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27355 gtgatatagagttgggtgacattggtgatattggccaatcacaatgccacaatgctt 27299  T

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Target: scaffold0481 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 2913 - 2967
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  2913 ggtgatattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaa 2967  T

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Target: scaffold1033 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold1033
Description:

Target: scaffold1033; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 2319 - 2267
Alignment:
Q  169 attgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  2319 attgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 2267  T

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Target: scaffold1029 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold1029
Description:

Target: scaffold1029; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 2319 - 2267
Alignment:
Q  169 attgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcat 221  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  2319 attgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 2267  T

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Target: scaffold0047 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 63869 - 63815
Alignment:
Q  163 ggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaa 217  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||||||||||    
T  63869 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaa 63815  T

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Target: scaffold0536 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 4909 - 4969
Alignment:
Q  154 ggtgacattggtgatattgaccaatcacaatgccacaatgcttgtgaaagagagagaaaca 214  Q
    |||||||||||||| || |||||||||||||   ||||||||||||||||||||| |||||    
T  4909 ggtgacattggtgacatcgaccaatcacaatattacaatgcttgtgaaagagagacaaaca 4969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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