View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13883_low_1 (Length: 425)
Name: NF13883_low_1
Description: NF13883
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13883_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 351; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 1 - 413
Target Start/End: Complemental strand, 33505618 - 33505204
Alignment:
| Q |
1 |
aaatagaattcaaatttgatactttataatataaatcatctagcgaccgctataagagaatagagaga--tattagatatatatgtgatgaattaataaa |
98 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| |
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| T |
33505618 |
aaatagaattcaaatttgatactttataatataaatcatctagcgaccgctataaaagaatagagagagatattagatatatatgtgatgaattaataa- |
33505520 |
T |
|
| Q |
99 |
caggaaatattattgttctattccttttaccgaaaagnnnnnnnnnn-gttaagcaggaggcaaataaccatgtacgtgttgcatgcttgcgttgcatgg |
197 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
33505519 |
caggaaatattattgttctattccttttaccgaaaagaaaaaaaaaaagttaagcaggaggcaaataaccatgtacgtgttgcatgcttgcattgcatgg |
33505420 |
T |
|
| Q |
198 |
ctattaacacgtggcacctactaatccctcccacgtatcaccctttcggtgtctcatatatattacttagcatcaaagagatcaagagaggaaataagaa |
297 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33505419 |
ctattaacacgtggcacctactaatccctcccacgtatcaccctttcggtgtctcatatatattacttagcatcaaagagatcaagagaggaaataagaa |
33505320 |
T |
|
| Q |
298 |
attaactgcaaacaaacggttatggcgatgaagctcaagtatctatcctccattgctgaggatgttgttgctagatgtgcacagtacgtaatattaatac |
397 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33505319 |
attaactgcaaacaaacggttatggcgatgaagctcaagtatctatcctccattgctgaggatgttgttgctagatgtgcacagtacgtaatattaatac |
33505220 |
T |
|
| Q |
398 |
tctcctattcatttca |
413 |
Q |
| |
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|||||||||||||||| |
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| T |
33505219 |
tctcctattcatttca |
33505204 |
T |
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