View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13885_low_9 (Length: 237)
Name: NF13885_low_9
Description: NF13885
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13885_low_9 |
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Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 544306 - 544527
Alignment:
| Q |
1 |
agataaatttacaaaaggtaaaacagaattgtcgagggttgtataacatgaggtggtttatggaaatttcttgtgcatctcaagttaatatggtgaaaca |
100 |
Q |
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| T |
544306 |
agataaatttacaaaaggtaaaacagaattgtcgagggttgtataacatgaggtgctttatggaaatttcttgtgcatctcaagttaatatggtgaaaca |
544405 |
T |
|
| Q |
101 |
tggacatattatacaaccctcaacaattgtgctttatggaaatttctggtgctttatttttcctgctaatgtaattaatcatctga-tatcagacagtga |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
544406 |
tggacatattatacaaccctcaacaattgtgctttatggaaatttctggtgctttatttttcctgctaatgtaattaatcatctgattatcagacagtga |
544505 |
T |
|
| Q |
200 |
catattaacatgaggtgtagag |
221 |
Q |
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||||||||||||||||| |||| |
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| T |
544506 |
catattaacatgaggtgcagag |
544527 |
T |
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