View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13886_low_13 (Length: 256)
Name: NF13886_low_13
Description: NF13886
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13886_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 11 - 240
Target Start/End: Complemental strand, 27751873 - 27751644
Alignment:
| Q |
11 |
caaagggccatgaaggattcacaaaataaacaataccaagaagaacaagccttgatgaatccaccaaaaaagggaagaaacaaatgtgtaacttgcgtat |
110 |
Q |
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| T |
27751873 |
caaagggccatgaaggattcacaaaataaacaataccaagaagaacaagccttgatgaatccaccaaaaaagggaagaaacaaatgtgtaacttgcatat |
27751774 |
T |
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| Q |
111 |
gcatagtgttgctactattactaattttagtaatagtttgtgttattcttgccttcacccttttcaagccaaaagacccaaaaacaaaggttgtttcagc |
210 |
Q |
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| T |
27751773 |
gcatagtgttattactattactagttttagtaatagtttgtgttattcttgccttcacccttttcaagccaaaagacccaaaaacaaaggttgtttcagc |
27751674 |
T |
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| Q |
211 |
tactttagaaggtatatcacctcgtctaac |
240 |
Q |
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| T |
27751673 |
tactttagaaggtatatcacctcgtctaac |
27751644 |
T |
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