View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1388_low_21 (Length: 345)
Name: NF1388_low_21
Description: NF1388
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1388_low_21 |
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Alignment Details
Target: chr3 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 12 - 225
Target Start/End: Original strand, 32098247 - 32098456
Alignment:
| Q |
12 |
atgaatacattttatatatgaaagacattaattacaaaaatgtaaagtaaatgtgccaagtggtgttagaatcaaatcaacaagcaaatcaaagctactt |
111 |
Q |
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| T |
32098247 |
atgaatacattttatatatgaaagacattaattacaaaaatgtaaagtaaatgtgccaagtggtgttagaatcaaatcaacaagcaaatcaaagctactt |
32098346 |
T |
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| Q |
112 |
tcaattattcatgaacaactgataaaatgtgaccaagagctatgtatgtagcaccgacactttagattaaaagcatggctggtgtccgatatatgtcaat |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32098347 |
tcaattattcatgaacaactgataaaatgtgaccaagagc----tatgtagcaccgacactttagattaaaagcatggctggtgtccgatatatgtcaat |
32098442 |
T |
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| Q |
212 |
gatacatgtgatca |
225 |
Q |
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|||||||||||||| |
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| T |
32098443 |
gatacatgtgatca |
32098456 |
T |
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