View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1388_low_33 (Length: 292)
Name: NF1388_low_33
Description: NF1388
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1388_low_33 |
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Alignment Details
Target: chr6 (Bit Score: 156; Significance: 6e-83; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 72 - 242
Target Start/End: Original strand, 10668618 - 10668789
Alignment:
| Q |
72 |
tgtacgatgatccaagctcttctaggaataaataactatcactccatcggttttgaaatgaatg-tatttacaatttttaatgtaagattaattattttt |
170 |
Q |
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| T |
10668618 |
tgtacgatgatccaagctcttctaggaataaataactatcactccatcggttttgaaatgaatgatatttacaatttttaatgtaagattaattattttt |
10668717 |
T |
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| Q |
171 |
ctctaattttgtcttctaataattattgtatacattactttcaaagcactatactcaatttgtacctatgat |
242 |
Q |
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| T |
10668718 |
ctccaattttgtcttctaataattattgtatacattactttcaaagcactatactcaatttgtacttatgat |
10668789 |
T |
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