View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13892_high_12 (Length: 275)
Name: NF13892_high_12
Description: NF13892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13892_high_12 |
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Alignment Details
Target: chr5 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 109 - 263
Target Start/End: Original strand, 2084253 - 2084407
Alignment:
| Q |
109 |
gatgagacacaactaagtgtaaccttaggaagctatataacatcaagaccgccataattaatcatcctatgcttgaagaagttcaagatatgcaaactta |
208 |
Q |
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| T |
2084253 |
gatgagacacaactaagtgtaaccttaggaagctatataacatcaagaccgccataattaatcatcctatgcttgaagaagttcaagatatgcaaactta |
2084352 |
T |
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| Q |
209 |
taatgctcaagtgaaaagcataattgttgcatatcatatacatgatcattttgat |
263 |
Q |
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| T |
2084353 |
taatgctcaagtgaaaagcataattgttgcatatcatatacatgatcattttgat |
2084407 |
T |
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