View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13892_high_23 (Length: 226)

Name: NF13892_high_23
Description: NF13892
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13892_high_23
NF13892_high_23
[»] chr6 (24 HSPs)
chr6 (4-200)||(13358423-13358606)
chr6 (1-103)||(24798514-24798616)
chr6 (1-101)||(2397770-2397870)
chr6 (1-101)||(17496286-17496386)
chr6 (34-103)||(24949533-24949602)
chr6 (1-101)||(16661570-16661670)
chr6 (1-101)||(30699261-30699361)
chr6 (1-101)||(32541445-32541545)
chr6 (1-103)||(995561-995663)
chr6 (1-101)||(2656638-2656738)
chr6 (1-101)||(2667293-2667393)
chr6 (1-101)||(6142475-6142575)
chr6 (1-104)||(9022837-9022940)
chr6 (31-101)||(31948639-31948709)
chr6 (1-103)||(4890094-4890196)
chr6 (1-71)||(29514994-29515064)
chr6 (1-101)||(2141568-2141668)
chr6 (1-101)||(24825165-24825265)
chr6 (1-101)||(31708893-31708993)
chr6 (1-101)||(6188624-6188724)
chr6 (42-101)||(29795451-29795510)
chr6 (1-94)||(10105818-10105911)
chr6 (1-94)||(32673755-32673848)
chr6 (1-102)||(35117279-35117380)
[»] chr2 (26 HSPs)
chr2 (1-100)||(16127743-16127842)
chr2 (1-103)||(18504470-18504572)
chr2 (1-101)||(40471736-40471836)
chr2 (1-99)||(7724574-7724672)
chr2 (1-103)||(10333541-10333643)
chr2 (1-102)||(12208988-12209089)
chr2 (1-102)||(16126045-16126146)
chr2 (1-101)||(8896271-8896371)
chr2 (1-102)||(5096247-5096348)
chr2 (1-102)||(16333479-16333580)
chr2 (1-101)||(8373434-8373534)
chr2 (1-101)||(41436832-41436932)
chr2 (1-101)||(41575562-41575662)
chr2 (1-101)||(4137410-4137509)
chr2 (1-101)||(45036363-45036463)
chr2 (1-99)||(31603379-31603477)
chr2 (1-103)||(38963793-38963895)
chr2 (1-101)||(6730066-6730166)
chr2 (31-90)||(11277562-11277621)
chr2 (31-102)||(26436676-26436747)
chr2 (1-101)||(37316876-37316976)
chr2 (1-102)||(20682653-20682754)
chr2 (1-86)||(43328764-43328849)
chr2 (1-101)||(2831707-2831807)
chr2 (51-102)||(25627037-25627088)
chr2 (1-66)||(11384008-11384073)
[»] chr3 (40 HSPs)
chr3 (1-102)||(53274954-53275055)
chr3 (1-101)||(16434816-16434916)
chr3 (1-103)||(9484594-9484696)
chr3 (1-103)||(29793337-29793439)
chr3 (1-102)||(901047-901148)
chr3 (1-102)||(42098586-42098687)
chr3 (1-101)||(12948040-12948140)
chr3 (1-101)||(49076385-49076485)
chr3 (1-96)||(34669613-34669708)
chr3 (1-106)||(18013429-18013534)
chr3 (1-106)||(34555146-34555251)
chr3 (1-106)||(52094053-52094158)
chr3 (1-101)||(34263663-34263763)
chr3 (1-101)||(46866343-46866443)
chr3 (1-100)||(53055584-53055683)
chr3 (1-103)||(2643228-2643330)
chr3 (1-101)||(4229147-4229247)
chr3 (1-101)||(29455667-29455767)
chr3 (1-101)||(29720395-29720495)
chr3 (1-101)||(38833924-38834024)
chr3 (1-101)||(48927761-48927861)
chr3 (1-101)||(50673677-50673777)
chr3 (4-98)||(1334257-1334351)
chr3 (1-103)||(1778359-1778461)
chr3 (1-103)||(29809343-29809445)
chr3 (42-102)||(44781983-44782043)
chr3 (1-101)||(4945810-4945910)
chr3 (1-101)||(32961246-32961346)
chr3 (31-90)||(36594408-36594467)
chr3 (42-99)||(14751042-14751099)
chr3 (1-101)||(36364722-36364820)
chr3 (1-82)||(43370310-43370391)
chr3 (1-98)||(49818760-49818857)
chr3 (1-101)||(28958958-28959058)
chr3 (1-101)||(36179095-36179195)
chr3 (1-96)||(38878437-38878532)
chr3 (1-101)||(4464881-4464981)
chr3 (36-101)||(28229039-28229104)
chr3 (36-101)||(47069406-47069471)
chr3 (1-94)||(43394517-43394610)
[»] chr7 (26 HSPs)
chr7 (1-101)||(37100990-37101090)
chr7 (1-103)||(38069049-38069151)
chr7 (1-101)||(16807110-16807210)
chr7 (1-95)||(38850708-38850802)
chr7 (31-103)||(36819614-36819686)
chr7 (1-101)||(9173300-9173400)
chr7 (1-101)||(30462185-30462285)
chr7 (31-106)||(32972321-32972396)
chr7 (1-102)||(38441812-38441913)
chr7 (1-101)||(25273981-25274081)
chr7 (1-101)||(35693794-35693894)
chr7 (1-101)||(40231928-40232028)
chr7 (46-104)||(3124155-3124213)
chr7 (1-103)||(9136626-9136728)
chr7 (1-103)||(40665732-40665834)
chr7 (1-102)||(28016115-28016215)
chr7 (1-94)||(40818661-40818754)
chr7 (1-101)||(42493517-42493617)
chr7 (31-101)||(41007950-41008020)
chr7 (31-101)||(46242474-46242544)
chr7 (31-102)||(4620065-4620137)
chr7 (1-98)||(47713396-47713493)
chr7 (63-106)||(19327325-19327368)
chr7 (1-101)||(31496609-31496709)
chr7 (43-101)||(35265823-35265881)
chr7 (36-101)||(33376775-33376840)
[»] chr4 (29 HSPs)
chr4 (1-101)||(55631838-55631938)
chr4 (1-96)||(39170963-39171058)
chr4 (1-95)||(1613181-1613275)
chr4 (1-103)||(31152659-31152761)
chr4 (1-103)||(46608211-46608313)
chr4 (1-101)||(3708253-3708353)
chr4 (1-101)||(10384848-10384948)
chr4 (1-104)||(42185271-42185374)
chr4 (34-99)||(48336424-48336489)
chr4 (1-102)||(48380472-48380573)
chr4 (1-101)||(37667737-37667837)
chr4 (1-101)||(43047387-43047487)
chr4 (1-101)||(43447165-43447265)
chr4 (1-96)||(47834107-47834202)
chr4 (1-103)||(31657319-31657421)
chr4 (1-102)||(8525379-8525480)
chr4 (47-103)||(39376881-39376937)
chr4 (1-101)||(40411571-40411672)
chr4 (1-104)||(6520432-6520535)
chr4 (3-101)||(28899036-28899134)
chr4 (1-103)||(33394075-33394177)
chr4 (1-101)||(24334344-24334444)
chr4 (1-101)||(28988357-28988457)
chr4 (36-95)||(52818683-52818742)
chr4 (1-102)||(37588494-37588595)
chr4 (1-101)||(1377503-1377603)
chr4 (1-101)||(29821050-29821150)
chr4 (1-101)||(39332793-39332893)
chr4 (60-101)||(18881379-18881420)
[»] chr1 (36 HSPs)
chr1 (1-103)||(45299316-45299418)
chr1 (1-101)||(10100481-10100581)
chr1 (1-101)||(43453133-43453233)
chr1 (1-101)||(52749281-52749381)
chr1 (1-103)||(1821596-1821698)
chr1 (1-103)||(8048716-8048818)
chr1 (1-102)||(10124108-10124209)
chr1 (1-101)||(2126652-2126752)
chr1 (1-101)||(5606359-5606459)
chr1 (1-101)||(7075298-7075398)
chr1 (1-101)||(8251117-8251217)
chr1 (1-101)||(48312029-48312128)
chr1 (1-99)||(44452197-44452295)
chr1 (1-101)||(5945765-5945865)
chr1 (1-101)||(6017417-6017517)
chr1 (1-101)||(31932146-31932246)
chr1 (1-101)||(41414203-41414303)
chr1 (1-101)||(41855689-41855789)
chr1 (1-101)||(44240519-44240619)
chr1 (1-101)||(50014529-50014629)
chr1 (1-88)||(44741356-44741443)
chr1 (1-104)||(47912278-47912381)
chr1 (31-84)||(10648199-10648252)
chr1 (1-95)||(26543874-26543968)
chr1 (50-101)||(28490160-28490211)
chr1 (3-95)||(40883417-40883509)
chr1 (31-101)||(12685896-12685966)
chr1 (1-72)||(23337836-23337907)
chr1 (31-101)||(29253479-29253549)
chr1 (1-92)||(31651869-31651960)
chr1 (1-88)||(49903653-49903740)
chr1 (3-84)||(27581039-27581120)
chr1 (1-86)||(36035701-36035786)
chr1 (1-101)||(33526130-33526230)
chr1 (36-91)||(52688540-52688594)
chr1 (1-86)||(48389081-48389166)
[»] chr8 (30 HSPs)
chr8 (1-102)||(30464431-30464532)
chr8 (1-101)||(4327080-4327180)
chr8 (1-101)||(20671256-20671356)
chr8 (1-102)||(3466282-3466383)
chr8 (1-101)||(40645609-40645709)
chr8 (1-101)||(44887676-44887776)
chr8 (1-102)||(38842161-38842263)
chr8 (1-102)||(25691558-25691659)
chr8 (31-102)||(11756775-11756846)
chr8 (1-101)||(23437774-23437874)
chr8 (31-101)||(28583294-28583364)
chr8 (31-101)||(44717296-44717366)
chr8 (1-102)||(761549-761650)
chr8 (1-94)||(29917889-29917981)
chr8 (1-101)||(37094132-37094232)
chr8 (1-103)||(8058985-8059085)
chr8 (1-108)||(23547061-23547168)
chr8 (1-104)||(25009141-25009244)
chr8 (1-84)||(25118803-25118886)
chr8 (1-103)||(8496847-8496949)
chr8 (1-103)||(14378647-14378749)
chr8 (1-102)||(43184740-43184841)
chr8 (1-101)||(4960151-4960251)
chr8 (1-101)||(5777515-5777615)
chr8 (1-101)||(14584168-14584268)
chr8 (41-103)||(8123653-8123715)
chr8 (1-101)||(30653360-30653460)
chr8 (1-101)||(44361921-44362021)
chr8 (1-103)||(27301860-27301962)
chr8 (1-94)||(43049230-43049323)
[»] chr5 (32 HSPs)
chr5 (1-102)||(30721649-30721750)
chr5 (1-101)||(1098175-1098275)
chr5 (1-101)||(19344663-19344763)
chr5 (1-101)||(27675540-27675640)
chr5 (1-101)||(33402555-33402655)
chr5 (1-94)||(8627142-8627235)
chr5 (1-102)||(20040379-20040480)
chr5 (1-101)||(1781109-1781209)
chr5 (1-101)||(30788205-30788305)
chr5 (1-103)||(9936852-9936954)
chr5 (1-101)||(31191141-31191241)
chr5 (1-101)||(40316818-40316918)
chr5 (1-101)||(41410623-41410723)
chr5 (1-102)||(13548212-13548313)
chr5 (1-98)||(14057711-14057808)
chr5 (1-98)||(14607521-14607618)
chr5 (31-102)||(10465289-10465360)
chr5 (1-101)||(14633007-14633107)
chr5 (1-101)||(20022860-20022960)
chr5 (1-101)||(32473986-32474086)
chr5 (31-94)||(34347474-34347537)
chr5 (1-101)||(41263093-41263193)
chr5 (1-104)||(40079978-40080081)
chr5 (1-95)||(30211705-30211799)
chr5 (1-101)||(39925203-39925304)
chr5 (1-101)||(1831351-1831451)
chr5 (1-104)||(2551591-2551694)
chr5 (1-101)||(39104243-39104344)
chr5 (36-99)||(14355502-14355564)
chr5 (36-94)||(2799638-2799696)
chr5 (42-90)||(967203-967251)
chr5 (1-98)||(34169832-34169929)
[»] scaffold0221 (1 HSPs)
scaffold0221 (1-101)||(5376-5476)
[»] scaffold0500 (1 HSPs)
scaffold0500 (1-101)||(639-739)
[»] scaffold0204 (1 HSPs)
scaffold0204 (34-99)||(23946-24011)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-101)||(183966-184066)
[»] scaffold1248 (1 HSPs)
scaffold1248 (1-101)||(1420-1520)
[»] scaffold0952 (1 HSPs)
scaffold0952 (1-101)||(793-893)
[»] scaffold0069 (1 HSPs)
scaffold0069 (1-101)||(4441-4541)
[»] scaffold0281 (1 HSPs)
scaffold0281 (1-101)||(13104-13204)


Alignment Details
Target: chr6 (Bit Score: 86; Significance: 3e-41; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 4 - 200
Target Start/End: Complemental strand, 13358606 - 13358423
Alignment:
Q  4 atttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagtaat 103  Q
    |||||||||||||||||| |       |||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| || ||||| ||||||||    
T  13358606 atttatctttgtatattaataacaaaatatggtcaaagtaagttaggtcaaaattacacattttcaaataagtcatctattgtggaacgga-ggagtaat 13358508  T
Q  104 taagaagaagagtcacaactctggcagtggtgatgtcggtgctcaaggacccctcgcggcctcgcgccacgtgttcaggctccacacttcccctcaa 200  Q
    |||||||||||||    ||||| || |||||||||||||||||||||||||        |||| |||||||||||||||||||||||||||||||||    
T  13358507 taagaagaagagt----actcttgccgtggtgatgtcggtgctcaaggacc--------cctcacgccacgtgttcaggctccacacttcccctcaa 13358423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 24798514 - 24798616
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| | ||||| ||||||||||||||||||||    
T  24798514 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagt 24798613  T
Q  101 aat 103  Q
    |||    
T  24798614 aat 24798616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 2397870 - 2397770
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| ||| |||||||||| || |||||||||||| | ||||| ||||||||||||||||||||    
T  2397870 attatttatctttgtatattagtagaaaaatatggtcaaagtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagt 2397771  T
Q  101 a 101  Q
    |    
T  2397770 a 2397770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 17496286 - 17496386
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| |  |||| ||||||||||||||||||||    
T  17496286 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacggagggagt 17496385  T
Q  101 a 101  Q
    |    
T  17496386 a 17496386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 24949602 - 24949533
Alignment:
Q  34 gatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagtaat 103  Q
    ||||||| |||||||| ||||| || |||||||||||||  |||||||||||||||||||||||||||||    
T  24949602 gatcaaagtaagttagatcaaaattgcacattttcaaatgggtcatctattgcgggacggagggagtaat 24949533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 16661570 - 16661670
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||||| |||||||||       || | ||||| |||||||||||||| ||||||||||||||||   |||||||||||||||| ||||||||    
T  16661570 attatttatctttatatattagtagaaaaatacggtcaaagtaagttaggtcaaaattacacattttcaaatggatcatctattgcgggactgagggagt 16661669  T
Q  101 a 101  Q
    |    
T  16661670 a 16661670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 30699361 - 30699261
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| ||||||||||| ||| |  |||| |||||||| |||||||||||    
T  30699361 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattacacatttttaaacagatcatttattgcggaacggagggagt 30699262  T
Q  101 a 101  Q
    |    
T  30699261 a 30699261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 32541445 - 32541545
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| ||| |||||||||| || || ||||||||| | ||||| ||||||||||||||||||||    
T  32541445 attatttatctttgtatattagtagaaaaatatggtcaaagtaaattaggtcaaaattgcatattttcaaacaggtcatttattgcgggacggagggagt 32541544  T
Q  101 a 101  Q
    |    
T  32541545 a 32541545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 995663 - 995561
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||  ||||| ||| || ||||||| ||||||||||||||| | ||||| |||||| |||||||||||||    
T  995663 attatttatctttgtatattagtagaaaaatatagtcaaagtaaatttggtcaaaattacacattttcaaacatgtcatttattgcaggacggagggagt 995564  T
Q  101 aat 103  Q
    |||    
T  995563 aat 995561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 2656638 - 2656738
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||  ||||| |||||||||||||| || |||||||||||| |  |||| |||||||||||||| |||||    
T  2656638 attatttatctttgtatattagtagaaaaatatagtcaaagtaagttaggtcaaaattgcacattttcaaacagctcatttattgcgggacggatggagt 2656737  T
Q  101 a 101  Q
    |    
T  2656738 a 2656738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 2667293 - 2667393
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||||||| |||||||       |||  ||||| |||||||||||||| || |||||||||||| |  |||| ||||||||||||||||||||    
T  2667293 attatttatctttgtttattagtagaaaaatatagtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacggagggagt 2667392  T
Q  101 a 101  Q
    |    
T  2667393 a 2667393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 6142475 - 6142575
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||||||||| |||||||||||||| || |||||||||||| | ||||  ||||  |||||||| |||||    
T  6142475 attatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcacttattaagggacggatggagt 6142574  T
Q  101 a 101  Q
    |    
T  6142575 a 6142575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 9022940 - 9022837
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||| |||||||||||||       |||| ||||| || ||||||||||| || || ||||||||| | ||||| |||||| |||||||||||||    
T  9022940 attatttatttttgtatattagtagaaaaatatggtcaaagtatgttaggtcaaaattgcatattttcaaacaggtcatttattgcaggacggagggagt 9022841  T
Q  101 aatt 104  Q
    ||||    
T  9022840 aatt 9022837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 31948639 - 31948709
Alignment:
Q  31 tatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagta 101  Q
    |||| ||||||||||||| |||| | ||||||||||||||||   |||||||||||| |||||||||||||    
T  31948639 tatggtcaaaataagttaagtcataattacacattttcaaatggatcatctattgcgagacggagggagta 31948709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 4890094 - 4890196
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| ||| |||||||||| || |||||||| ||||   |||||||||||  ||||||||||||    
T  4890094 attatttatctttgtatattagtagaaaaatatggtcaaagtaaattaggtcaaaattgcacatttttaaatggatcatctattgcatgacggagggagt 4890193  T
Q  101 aat 103  Q
    |||    
T  4890194 aat 4890196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 29514994 - 29515064
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaa 71  Q
    |||||||||||||||||||||||       |||||||||| |||||||||||||| || ||||||||||||    
T  29514994 attatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattgcacattttcaaa 29515064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 2141668 - 2141568
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||||||||| |||||||||||||| ||  ||||||||||| | ||||  ||||  |||||||| |||||    
T  2141668 attatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattgtacattttcaaacaggtcacttattaagggacggacggagt 2141569  T
Q  101 a 101  Q
    |    
T  2141568 a 2141568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 24825265 - 24825165
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| | ||||  ||||   |||||||||||||    
T  24825265 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacatgtcacttattaaaggacggagggagt 24825166  T
Q  101 a 101  Q
    |    
T  24825165 a 24825165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 31708993 - 31708893
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       || | ||||| ||| ||| |||||| || |||||||| |||||  ||||||||||| |||||||||||||    
T  31708993 attatttatctttgtatattagtagaaaaatacggtcaaagtaaattaagtcaaaattgcacatttttaaatagatcatctattgcaggacggagggagt 31708894  T
Q  101 a 101  Q
    |    
T  31708893 a 31708893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 6188624 - 6188724
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||||| |||||||||       |||| ||||| |||||||||||||| || |||||||||||| | ||||  ||||  |||||||| |||||    
T  6188624 attatttatctttatatattagtaaaaaaatatgctcaaagtaagttaggtcaaaattgcacattttcaaacatgtcacttattaagggacggatggagt 6188723  T
Q  101 a 101  Q
    |    
T  6188724 a 6188724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 101
Target Start/End: Complemental strand, 29795510 - 29795451
Alignment:
Q  42 taagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagta 101  Q
    |||||||| ||||| || |||||||||||| |  |||| |||||||||||||||||||||    
T  29795510 taagttagatcaaaattgcacattttcaaacagatcatttattgcgggacggagggagta 29795451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 10105911 - 10105818
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacgga 94  Q
    ||||||||||||| |||||||||       |||| | ||||||||||| |||||| || | |||||| |||  |||||||||||| ||||||||    
T  10105911 attatttatctttatatattagtagaaaaatatggttaaaataagttaagtcaaaattgctcatttttaaacgagtcatctattgtgggacgga 10105818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 32673848 - 32673755
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacgga 94  Q
    ||||||| ||| |||||||||||       |||| |||||||||||||| ||||| || || ||||| |||||  ||||||||| |||||||||    
T  32673848 attatttctctatgtatattagtagaaaaatatggtcaaaataagttagatcaaaattgcaaatttttaaatagatcatctattacgggacgga 32673755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 35117380 - 35117279
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| ||||||| || ||| || |||||||||||||  ||  | |||||||| || ||||||||    
T  35117380 attatttatctttgtatattagtggaaaaatatggtcaaagtaagttatgttaaaattgcacattttcaaatgggttctttattgcggaacagagggagt 35117281  T
Q  101 aa 102  Q
    ||    
T  35117280 aa 35117279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 16127743 - 16127842
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||||||||| |||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||    
T  16127743 attatttatctttgtatattagtggaaaaatatgatcaaagtaagttaggtcaaaattacacattttcaaataggtcatttattgcgggacggagggagt 16127842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 18504572 - 18504470
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||| ||||||||||||||||       |||| ||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||| |||    
T  18504572 attattgatctttgtatattagtagaaaaatatggtcaaaataagttacgtcaaaattacacattttcaaataagtcatctattacgggacggaggaagt 18504473  T
Q  101 aat 103  Q
    |||    
T  18504472 aat 18504470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 40471836 - 40471736
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||||||||||||||||| |||||| || |||||||||||| | || || ||||||||||||||||||||    
T  40471836 attatttatctttgtatattagtaaaaaaatatgatcaaaataagttaagtcaaaattgcacattttcaaacaggttatttattgcgggacggagggagt 40471737  T
Q  101 a 101  Q
    |    
T  40471736 a 40471736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 7724574 - 7724672
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggag 99  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| | ||||| |||||||||||||||||||    
T  7724574 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggag 7724672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 10333541 - 10333643
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| |||||||||||||||||||| ||||||||||||||| |  |||| |||| || ||||||||||||    
T  10333541 attatttatctttgtatattagtagaaaaatatggtcaaaataagttaggtcaaaattacacattttcaaacagatcatttattacgagacggagggagt 10333640  T
Q  101 aat 103  Q
    |||    
T  10333641 aat 10333643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 12209089 - 12208988
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| | ||||| |||||||||||||||| |||    
T  12209089 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaggaagt 12208990  T
Q  101 aa 102  Q
    ||    
T  12208989 aa 12208988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 16126045 - 16126146
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||||  ||||| ||||||||||||||| ||||    
T  16126045 attatttatctttgtatattagtggaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatttattgcgggacggagagagt 16126144  T
Q  101 aa 102  Q
    ||    
T  16126145 aa 16126146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 8896371 - 8896271
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||||  |||||||||||||| | |||||||||    
T  8896371 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatctattgcggaatggagggagt 8896272  T
Q  101 a 101  Q
    |    
T  8896271 a 8896271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 5096348 - 5096247
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||||| |||||||||       |||||||||||||||||| |||||| ||  ||||||||||| | || || ||||||||||||||||||||    
T  5096348 attatttatctttatatattagtagaaaaatatgatcaaaataagttatgtcaaaattgtacattttcaaacaggtaatttattgcgggacggagggagt 5096249  T
Q  101 aa 102  Q
    ||    
T  5096248 aa 5096247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 16333580 - 16333479
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||||||||||| |||       |||| ||||| |||||||||||||| || |||||||||||||  ||||| ||||||||||||||| ||||    
T  16333580 attatttatctttgtatatcagtggaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatttattgcgggacggagagagt 16333481  T
Q  101 aa 102  Q
    ||    
T  16333480 aa 16333479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 8373534 - 8373434
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| |  |||| ||||||||||| ||||||||    
T  8373534 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacagagggagt 8373435  T
Q  101 a 101  Q
    |    
T  8373434 a 8373434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 41436932 - 41436832
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| ||| ||||||||||| |  |||| |||| |||||||||||||||    
T  41436932 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattatacattttcaaacatttcatttattacgggacggagggagt 41436833  T
Q  101 a 101  Q
    |    
T  41436832 a 41436832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 41575662 - 41575562
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||| | |||||||||||       |||||||||| |||| ||||||||| || || ||||||||||| ||||| ||||||||||||||||||||    
T  41575662 attatttatatatgtatattagtagaaaaatatgatcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattgcgggacggagggagt 41575563  T
Q  101 a 101  Q
    |    
T  41575562 a 41575562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 4137509 - 4137410
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||||||||| ||| |||| ||||| ||  ||||||||||| | ||||| ||||||||||||||||||||    
T  4137509 attatttatctttgtatattagtagaaaaatatgatcaaa-taaattagatcaaaattgtacattttcaaacatgtcatttattgcgggacggagggagt 4137411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 45036463 - 45036363
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| |||   ||||||| |||||| ||||||||||| ||||  |||||||||||| |||||||||||||    
T  45036463 attatttatctttgtatattagtagaaaaatatggtcagcgtaagttaagtcaaaattacacatttttaaatgggtcatctattgcaggacggagggagt 45036364  T
Q  101 a 101  Q
    |    
T  45036363 a 45036363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 31603379 - 31603477
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggag 99  Q
    ||||||||| |||||||||||||       |||  ||||| |||||||||||||| || |||||||||||| | ||||| ||||| |||||||||||||    
T  31603379 attatttatatttgtatattagtagaaaaatattgtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgtgggacggagggag 31603477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 38963895 - 38963793
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| | ||||  ||||  ||||| ||||||||    
T  38963895 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcacttattaagggacagagggagt 38963796  T
Q  101 aat 103  Q
    |||    
T  38963795 aat 38963793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 6730066 - 6730166
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||| |||||||||||       |||| ||||  |||| ||||||||| || || |||||||| || ||||||||||||| ||||||||||||    
T  6730066 attatttatctatgtatattagtagaaaaatatggtcaatgtaagctaggtcaaaattgcaaattttcaagtaggtcatctattgcgagacggagggagt 6730165  T
Q  101 a 101  Q
    |    
T  6730166 a 6730166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 11277621 - 11277562
Alignment:
Q  31 tatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcggga 90  Q
    |||||||||| ||||||| |||||| || |||||||||||||| ||||| ||||||||||    
T  11277621 tatgatcaaagtaagttatgtcaaaattgcacattttcaaataggtcatttattgcggga 11277562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 26436676 - 26436747
Alignment:
Q  31 tatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagtaa 102  Q
    ||||||||||||||||||| |||||  |||| |||||| |||  |||||||| |||||||| ||||||||||    
T  26436676 tatgatcaaaataagttagatcaaaagtacatattttccaatgggtcatctaatgcgggactgagggagtaa 26436747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 37316976 - 37316876
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||| |||||||||||       |||| ||||| |||   |||||||| || || ||||||||||| |||||| |||||||||||||||||||    
T  37316976 attatttatctatgtatattagtagaaatatatggtcaaagtaaaccaggtcaaaattgcaaattttcaaataggtcatcgattgcgggacggagggagt 37316877  T
Q  101 a 101  Q
    |    
T  37316876 a 37316876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 20682754 - 20682653
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||| |||||||||||       |||  ||||| |||| | ||||||| || || ||||| ||||| |||| |||||||||||||||||||||    
T  20682754 attatttatctatgtatattagtagaaaaatattgtcaaagtaagctgggtcaaaattgcaaatttttaaataggtcaactattgcgggacggagggagt 20682655  T
Q  101 aa 102  Q
    ||    
T  20682654 aa 20682653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 43328764 - 43328849
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgc 86  Q
    |||||||||||||||||||||||       |||| ||||| |||||||| ||||| ||| ||||||||||||   |||||||||||    
T  43328764 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttagatcaaaattatacattttcaaatggatcatctattgc 43328849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 2831807 - 2831707
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||| |||||||||||||       |||| ||||| |||||||||||||| ||||||||||| ||||   |||| ||| |||| |||| ||||||    
T  2831807 attatttatatttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattacacatttttaaatggatcatttatcgcggtacggtgggagt 2831708  T
Q  101 a 101  Q
    |    
T  2831707 a 2831707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 25627088 - 25627037
Alignment:
Q  51 tcaaagttacacattttcaaataagtcatctattgcgggacggagggagtaa 102  Q
    ||||| ||||||||||||||||  ||||||| |||||||| |||||||||||    
T  25627088 tcaaaattacacattttcaaatgggtcatctgttgcgggatggagggagtaa 25627037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 11384008 - 11384073
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattt 66  Q
    ||||||||||||| |||||||||       ||||||||||||||||||  ||||| ||||||||||    
T  11384008 attatttatctttatatattagtagaaaaatatgatcaaaataagttatatcaaaattacacattt 11384073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 2e-26; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 53274954 - 53275055
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       ||||||||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||| |||||    
T  53274954 attatttatctttgtatattagtagaaaaatatgatcaaaataagttaggtcaaaattgcacattttcaaataggtcatttattgcgggacggaaggagt 53275053  T
Q  101 aa 102  Q
    ||    
T  53275054 aa 53275055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 16434816 - 16434916
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| |||||||||||||||||||| || |||||||||||| | ||||| ||||||||||||||||||||    
T  16434816 attatttatctttgtatattagtaaaaaaatatggtcaaaataagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagt 16434915  T
Q  101 a 101  Q
    |    
T  16434916 a 16434916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 9484696 - 9484594
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| | ||||| ||||||||||||||||||||    
T  9484696 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagt 9484597  T
Q  101 aat 103  Q
    |||    
T  9484596 aat 9484594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 29793337 - 29793439
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| | ||||| ||||||||||||||||||||    
T  29793337 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagt 29793436  T
Q  101 aat 103  Q
    |||    
T  29793437 aat 29793439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 901047 - 901148
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||||||||| |||||||||||||| || |||||||||||| |  |||| ||||||||||||||||||||    
T  901047 attatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacggagggagt 901146  T
Q  101 aa 102  Q
    ||    
T  901147 aa 901148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 42098586 - 42098687
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| | ||||| ||||||||||||||||||||    
T  42098586 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagt 42098685  T
Q  101 aa 102  Q
    ||    
T  42098686 aa 42098687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 12948140 - 12948040
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| | ||||| ||||||||||||||||||||    
T  12948140 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggagggagt 12948041  T
Q  101 a 101  Q
    |    
T  12948040 a 12948040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 49076385 - 49076485
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| | ||||| ||||||||||||||||||||    
T  49076385 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagt 49076484  T
Q  101 a 101  Q
    |    
T  49076485 a 49076485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 34669708 - 34669613
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagg 96  Q
    |||||||||||||||||||||||       |||||||||| |||||||||||||| || |||||||||||| | ||||| ||||||||||||||||    
T  34669708 attatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggagg 34669613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 18013429 - 18013534
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||||||||| ||| ||| |||||| || |||||||||||||  |||||||||| |||||||||||||||    
T  18013429 attatttatctttgtatattagtagaaaaatatgatcaaagtaaattatgtcaaaattgcacattttcaaatgggtcatctattacgggacggagggagt 18013528  T
Q  101 aattaa 106  Q
    | ||||    
T  18013529 acttaa 18013534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 34555251 - 34555146
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| ||||||||||||||  | |||||||||||| | ||||  ||||||||||||||||||||    
T  34555251 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaaatgcacattttcaaacaggtcacttattgcgggacggagggagt 34555152  T
Q  101 aattaa 106  Q
    ||||||    
T  34555151 aattaa 34555146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 52094053 - 52094158
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||| ||||| || || |||||||||| ||||||||||||||| ||||||| |||    
T  52094053 attatttatctttgtatattagtagaaaaatatggtcaaattaagttagatcaaaattgcaaattttcaaatgagtcatctattgcggaacggaggaagt 52094152  T
Q  101 aattaa 106  Q
    ||||||    
T  52094153 aattaa 52094158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 34263663 - 34263763
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||| ||| | ||||| ||||||||||||||||||||    
T  34263663 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacatttttaaacaggtcatttattgcgggacggagggagt 34263762  T
Q  101 a 101  Q
    |    
T  34263763 a 34263763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 46866443 - 46866343
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||   ||||||||||||||||||| || |||||||||||| | ||||| ||||||||||||||||||||    
T  46866443 attatttatctttgtatattagtagaaaaatattgccaaaataagttaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggagggagt 46866344  T
Q  101 a 101  Q
    |    
T  46866343 a 46866343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 53055584 - 53055683
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||||| |||||||||||| ||||||||||||||||  ||||| |||||  |||||||||||||    
T  53055584 attatttatctttgtatattagtagaaaaatatggtcaaaattagttaggtcaaaattacacattttcaaattggtcatttattgtaggacggagggagt 53055683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 2643228 - 2643330
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||| |||||||||||||       |||| ||||| |||  ||||||||| || || ||||||||||| ||||||||||||||||||||||||||    
T  2643228 attatttatatttgtatattagtagaaaaatatggtcaaagtaaactaggtcaaaattgcaaattttcaaataggtcatctattgcgggacggagggagt 2643327  T
Q  101 aat 103  Q
    |||    
T  2643328 aat 2643330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 4229147 - 4229247
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||| |||||||||||       |||||||||| |||| ||||||||| || || ||||||||||||||||| |||||| ||| |||||||||    
T  4229147 attatttatctatgtatattagtaaaaaaatatgatcaaagtaagctaggtcaaaattgcaaattttcaaataagtcatttattgcaggatggagggagt 4229246  T
Q  101 a 101  Q
    |    
T  4229247 a 4229247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 29455667 - 29455767
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| | ||||| |||| | |||||||||||||    
T  29455667 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacaggacggagggagt 29455766  T
Q  101 a 101  Q
    |    
T  29455767 a 29455767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 29720495 - 29720395
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||||| |||||||||       || ||||||| |||||||||||||| || |||||||||||| |  |||| ||||||||||||||||||||    
T  29720495 attatttatctttatatattagtggaaaaataggatcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcgggacggagggagt 29720396  T
Q  101 a 101  Q
    |    
T  29720395 a 29720395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 38833924 - 38834024
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| ||||||||||| ||| | ||||| ||||||||||| |||| |||    
T  38833924 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattacacatttttaaacaggtcatttattgcgggacagaggaagt 38834023  T
Q  101 a 101  Q
    |    
T  38834024 a 38834024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 48927761 - 48927861
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||| ||| || |||||||||||| |  |||| ||||||||||||||||||||    
T  48927761 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtaaaaattgcacattttcaaacagatcatttattgcgggacggagggagt 48927860  T
Q  101 a 101  Q
    |    
T  48927861 a 48927861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 50673777 - 50673677
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| ||||||| |||||| || |||||||||||| | ||||| |||||||| |||||||||||    
T  50673777 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaagtcaaaattgcacattttcaaacaggtcatttattgcggaacggagggagt 50673678  T
Q  101 a 101  Q
    |    
T  50673677 a 50673677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 98
Target Start/End: Original strand, 1334257 - 1334351
Alignment:
Q  4 atttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggaggga 98  Q
    ||||||||||||||||||||       |||| | ||| |||||||| ||||| ||||||||||||||||  |||||||||||||| |||||||||    
T  1334257 atttatctttgtatattagtaaaaaaatatggtaaaattaagttagatcaaaattacacattttcaaatgggtcatctattgcggaacggaggga 1334351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 1778461 - 1778359
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||| |||||||||||       |||| ||||| |||| || |||||| || || ||||||||||| |||||||||||||||||||||| |||    
T  1778461 attatttatctatgtatattagtagaaaaatatggtcaaagtaagctaagtcaaaattgcaaattttcaaataggtcatctattgcgggacggaggaagt 1778362  T
Q  101 aat 103  Q
    |||    
T  1778361 aat 1778359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 29809445 - 29809343
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||||||||||||| |       |||| || || |||| ||| ||||| || || ||||||||||| ||||||||||||||||||||||||||    
T  29809445 attatttatctttgtatattaatagaaaaatatggtcgaagtaagctagatcaaaattgcaaattttcaaataggtcatctattgcgggacggagggagt 29809346  T
Q  101 aat 103  Q
    |||    
T  29809345 aat 29809343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 102
Target Start/End: Original strand, 44781983 - 44782043
Alignment:
Q  42 taagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagtaa 102  Q
    |||||||| ||||| || || ||||||||||| ||||||||||||||||||||||||||||    
T  44781983 taagttagttcaaaattgcaaattttcaaataggtcatctattgcgggacggagggagtaa 44782043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 4945810 - 4945910
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||| |||||||||||       |||| ||||| |||||||||||||| || || ||| ||||||| ||||||||| | ||||||||||||||    
T  4945810 attatttatctatgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcaaattctcaaatacgtcatctatggtgggacggagggagt 4945909  T
Q  101 a 101  Q
    |    
T  4945910 a 4945910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 32961346 - 32961246
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || || ||||| ||||  |||||||||||||||||| | |||||    
T  32961346 attatttatctttgtatattagtagaaaaatatggtcaaactaagttaggtcaaaattgcaaatttttaaatgggtcatctattgcgggacgaaaggagt 32961247  T
Q  101 a 101  Q
    |    
T  32961246 a 32961246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 36594408 - 36594467
Alignment:
Q  31 tatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcggga 90  Q
    ||||||||||||||||||||||||| ||||||||||||||||   |||||| ||||||||    
T  36594408 tatgatcaaaataagttaggtcaaaattacacattttcaaatggatcatctgttgcggga 36594467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 14751042 - 14751099
Alignment:
Q  42 taagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggag 99  Q
    |||||||||||||| || |||||||||||| | |||||||||||||||| ||||||||    
T  14751042 taagttaggtcaaaattgcacattttcaaacaggtcatctattgcgggagggagggag 14751099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 36364722 - 36364820
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||| |||||||||||       |||| |||||||||||||||||||| || ||  |||||||||| || || |||||||||||| |||||||    
T  36364722 attatttatctatgtatattagtagaaaaatatggtcaaaataagttaggtcaaaattgca--ttttcaaataggttatttattgcgggacgaagggagt 36364819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 43370391 - 43370310
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatcta 82  Q
    |||||||||||||||||||||||       || ||||||| ||||||| |||||| || |||||||||||||| ||||||||    
T  43370391 attatttatctttgtatattagtataaaaatacgatcaaagtaagttatgtcaaaattgcacattttcaaataggtcatcta 43370310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 49818857 - 49818760
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggaggga 98  Q
    ||||||||||| |||||||||||       |||| ||||| ||| |||||||||| || || |||||||| ||| ||||||||||||||||| |||||    
T  49818857 attatttatctatgtatattagtagaaaaatatggtcaaagtaaattaggtcaaaattgcaaattttcaactaaatcatctattgcgggacgaaggga 49818760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 28958958 - 28959058
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||||| |||||||||       |||| ||||| |||| ||||||||| || || ||||| |||||  |||||||||||| ||||||||||||    
T  28958958 attatttatctttatatattagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaatttttaaatagatcatctattgcgagacggagggagt 28959057  T
Q  101 a 101  Q
    |    
T  28959058 a 28959058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 36179095 - 36179195
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||||||||| ||| ||| |||||| || |||||||||||| | || || ||||| ||||||||| ||||    
T  36179095 attatttatctttgtatattagtagaaaaatatgatcaaagtaaattaagtcaaaattgcacattttcaaacaggttatttattgtgggacggagagagt 36179194  T
Q  101 a 101  Q
    |    
T  36179195 a 36179195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 38878437 - 38878532
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagg 96  Q
    ||||||||||||| |||||||||       |||| ||||||||| ||| |||||| || |||||||||||| | ||||| |||| |||||||||||    
T  38878437 attatttatctttttatattagtagaaaaatatggtcaaaataatttatgtcaaaattgcacattttcaaacaggtcatttattacgggacggagg 38878532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 4464981 - 4464881
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||| |||| ||||||       |||||||||| |||  ||||| ||  || || |||||||||||  |||||||||||||||||||||||||    
T  4464981 attatttatctatgtacattagtagaaaaatatgatcaaagtaaactaggttaacattgcaaattttcaaatagatcatctattgcgggacggagggagt 4464882  T
Q  101 a 101  Q
    |    
T  4464881 a 4464881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 28229039 - 28229104
Alignment:
Q  36 tcaaaataagttaggtcaa-agttacacattttcaaataagtcatctattgcgggacggagggagta 101  Q
    |||||||| |||||||||| ||| | ||||||||||||| |||||||||||  ||||||||||||||    
T  28229039 tcaaaatatgttaggtcaatagtga-acattttcaaataggtcatctattgtaggacggagggagta 28229104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 47069471 - 47069406
Alignment:
Q  36 tcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagta 101  Q
    ||||| || ||||||||||| ||  | ||||||||||  ||||||||||| |||||||||||||||    
T  47069471 tcaaagtaggttaggtcaaaattgaaaattttcaaatgtgtcatctattgtgggacggagggagta 47069406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 43394517 - 43394610
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacgga 94  Q
    ||||||||||||||| |||||||       |||| |||||||||||||| ||| | || ||||||||||||  ||||||| ||||  |||||||    
T  43394517 attatttatctttgtttattagtagaaaaatatggtcaaaataagttagatcagaattgcacattttcaaacgagtcatcaattgtaggacgga 43394610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 2e-23; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 37100990 - 37101090
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||| ||||||||||||| |       |||| ||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  37100990 attatttttctttgtatattaatagaaaaatatggtcaaagtaagttaggtcaaaattacacattttcaaataggtcatctattgcgggacggagggagt 37101089  T
Q  101 a 101  Q
    |    
T  37101090 a 37101090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 38069151 - 38069049
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| | ||||| |||||||| |||||||||||    
T  38069151 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcggaacggagggagt 38069052  T
Q  101 aat 103  Q
    |||    
T  38069051 aat 38069049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 16807110 - 16807210
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| | ||||| |||| |||||||||||||||    
T  16807110 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagt 16807209  T
Q  101 a 101  Q
    |    
T  16807210 a 16807210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 38850802 - 38850708
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggag 95  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| ||||||||||||||||  ||||||||||| || ||||||    
T  38850802 attatttatctttgtatattagtggaaaaatatggtcaaagtaagttaggtcaaaattacacattttcaaatgggtcatctattgtggaacggag 38850708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 36819686 - 36819614
Alignment:
Q  31 tatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagtaat 103  Q
    |||||||||| |||||||||||||| || |||||||||||| | ||||| |||||||| ||||||||||||||    
T  36819686 tatgatcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcggaacggagggagtaat 36819614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 9173300 - 9173400
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| |||||| |||| ||||  |||||||||| ||| |||||||||||    
T  9173300 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattacacgtttttaaattggtcatctattccggaacggagggagt 9173399  T
Q  101 a 101  Q
    |    
T  9173400 a 9173400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 30462185 - 30462285
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| ||||||| |||||| || |||||||||||| |  |||| ||||||||||||||||||||    
T  30462185 attatttatctttgtatattagtaaaaaaatatggtcaaagtaagttaagtcaaaattgcacattttcaaacagatcatttattgcgggacggagggagt 30462284  T
Q  101 a 101  Q
    |    
T  30462285 a 30462285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 32972321 - 32972396
Alignment:
Q  31 tatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagtaattaa 106  Q
    |||| ||||| |||| ||||||||| || || ||||||||||| |||||||||||||||| |||||||||||||||    
T  32972321 tatggtcaaagtaagctaggtcaaacttgcaaattttcaaataggtcatctattgcgggagggagggagtaattaa 32972396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 38441913 - 38441812
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||| ||||||||||||||||       |||| ||||| |||||||||| ||| |||||||||||||||| |||||||||||| |  |||||| ||||    
T  38441913 attattcatctttgtatattagtagaaaaatatggtcaaagtaagttaggtaaaaattacacattttcaaatgagtcatctattgtgtaacggagagagt 38441814  T
Q  101 aa 102  Q
    ||    
T  38441813 aa 38441812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 25273981 - 25274081
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| |  |||| |||||| ||||||| |||||    
T  25273981 attatttatctttgtatattagtagaaaattatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcaggacggatggagt 25274080  T
Q  101 a 101  Q
    |    
T  25274081 a 25274081  T

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Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 35693794 - 35693894
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||| |||||||||||||       |||| || || |||||||||||||| || |||||||||||| | ||||| ||||||| ||||||||||||    
T  35693794 attatttatttttgtatattagtagaaaaatatggtcgaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgcgacggagggagt 35693893  T
Q  101 a 101  Q
    |    
T  35693894 a 35693894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 40232028 - 40231928
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||||| |||||||||       |||| ||||||||| |||||||||| || |||||||||||| | || || |||| |||||||||||||||    
T  40232028 attatttatctttatatattagtagaaaaatatggtcaaaataaattaggtcaaaattgcacattttcaaacaggttatttattacgggacggagggagt 40231929  T
Q  101 a 101  Q
    |    
T  40231928 a 40231928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 104
Target Start/End: Original strand, 3124155 - 3124213
Alignment:
Q  46 ttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagtaatt 104  Q
    |||| ||||| |||||||||||||||| ||||||||||||| |||||||| ||||||||    
T  3124155 ttagatcaaaattacacattttcaaatgagtcatctattgcaggacggagagagtaatt 3124213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 9136626 - 9136728
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||||||| ||||| |       |||| |||||||||  ||||||||| ||||||||| ||||||   ||||||||||||||| |||||||||    
T  9136626 attatttatctttgtctattaatagaaaaatatggtcaaaataaactaggtcaaaattacacattatcaaatggatcatctattgcgggatggagggagt 9136725  T
Q  101 aat 103  Q
    |||    
T  9136726 aat 9136728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 40665732 - 40665834
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||| ||||||||||        |||| ||||| |||| || |||||| ||||| |||||||||||| ||||||||||||| ||||| |||||    
T  40665732 attatttatctatgtatattagctgaaaaatatggtcaaagtaagctaagtcaaaattacaaattttcaaataaatcatctattgcggaacggaaggagt 40665831  T
Q  101 aat 103  Q
    |||    
T  40665832 aat 40665834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 28016215 - 28016115
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||| ||||| || |||||||||||||  |||||| ||||| | |||||||||||    
T  28016215 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttagatcaaaattgcacattttcaaatgggtcatc-attgcagaacggagggagt 28016117  T
Q  101 aa 102  Q
    ||    
T  28016116 aa 28016115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 40818661 - 40818754
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacgga 94  Q
    |||||||||||||||||||||||       |||| ||| | |||||||| ||||| || ||||||||||||||  ||||||||| |||||||||    
T  40818661 attatttatctttgtatattagtagaaaaatatggtcagagtaagttagatcaaaattgcacattttcaaatagatcatctattacgggacgga 40818754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 42493617 - 42493517
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| || ||||||||||     |||||| ||||||| ||||||||||| ||||||||||||||    
T  42493617 attatttatctttgtatattagtagaaaaatatggtcaaagtatgttaggtcaatcgcgcacattgtcaaataggtcatctattgtgggacggagggagt 42493518  T
Q  101 a 101  Q
    |    
T  42493517 a 42493517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 41007950 - 41008020
Alignment:
Q  31 tatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagta 101  Q
    |||| ||||| |||||||||||||| ||||| ||||| |||| |||||||||||| | || ||||||||||    
T  41007950 tatggtcaaagtaagttaggtcaaaattacatatttttaaatgagtcatctattgtgagatggagggagta 41008020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 46242474 - 46242544
Alignment:
Q  31 tatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagta 101  Q
    |||| ||||| |||||||||||||| || ||||||||||||| |||||  |||||| ||||| ||||||||    
T  46242474 tatggtcaaagtaagttaggtcaaaattgcacattttcaaatgagtcaaatattgcaggacgaagggagta 46242544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 4620137 - 4620065
Alignment:
Q  31 tatgatcaaaataagttaggtcaaagttacacattttc-aaataagtcatctattgcgggacggagggagtaa 102  Q
    |||| ||||| |||||||||||||| |||||||||||| |||| | | | |||||||||||| ||||||||||    
T  4620137 tatggtcaaagtaagttaggtcaaaattacacattttcaaaatgaattacctattgcgggacagagggagtaa 4620065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 47713396 - 47713493
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggaggga 98  Q
    ||||||||||||||||||||||        || | ||||| |||||||||||||| || |||||||||||||  ||||||||||  ||||| ||||||    
T  47713396 attatttatctttgtatattagcaaaaaaatacggtcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatctattatgggacagaggga 47713493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 106
Target Start/End: Complemental strand, 19327368 - 19327325
Alignment:
Q  63 attttcaaataagtcatctattgcgggacggagggagtaattaa 106  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||||    
T  19327368 atttttaaatatgtcatctattgcgggacggagagagtaattaa 19327325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 31496609 - 31496709
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||||||||||||| |       || | ||||| |||||||||||||| ||  |||||||||||| | | ||||||| || ||||||||||||    
T  31496609 attatttatctttgtatattaatagaaaaatacggtcaaagtaagttaggtcaaaattgtacattttcaaatgaattatctattacgagacggagggagt 31496708  T
Q  101 a 101  Q
    |    
T  31496709 a 31496709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 35265823 - 35265881
Alignment:
Q  43 aagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagta 101  Q
    ||||||||||||| ||  ||||||| ||| ||||||| |||| ||||||||||||||||    
T  35265823 aagttaggtcaaaattgtacatttttaaacaagtcatttattacgggacggagggagta 35265881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 33376840 - 33376775
Alignment:
Q  36 tcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagta 101  Q
    ||||| |||||||||||||| ||| | | ||||||||   |||||||||||||||| |||||||||    
T  33376840 tcaaagtaagttaggtcaaaattaaaaaatttcaaatggatcatctattgcgggacagagggagta 33376775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 2e-23; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 55631838 - 55631938
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| |||||||||||||||||||| || |||||||||||| | ||||| ||||||||||||||||||||    
T  55631838 attatttatctttgtatattagtaaaaaaatatggtcaaaataagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagt 55631937  T
Q  101 a 101  Q
    |    
T  55631938 a 55631938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 39171058 - 39170963
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagg 96  Q
    |||||||||||||||||||||||       |||| |||||||||||||||||||| || |||||||||||| | ||||| ||||||||||||||||    
T  39171058 attatttatctttgtatattagtagaaaaatatggtcaaaataagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagg 39170963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 1613181 - 1613275
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggag 95  Q
    |||||||||||||||||||||||       |||| ||||| ||| |||||||||| ||||||||||||||||| |||||||||| ||||||||||    
T  1613181 attatttatctttgtatattagtagaaaaatatggtcaaagtaaattaggtcaaaattacacattttcaaataggtcatctattacgggacggag 1613275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 31152761 - 31152659
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| | ||||| ||||| ||||||||||||||    
T  31152761 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgtgggacggagggagt 31152662  T
Q  101 aat 103  Q
    |||    
T  31152661 aat 31152659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 46608313 - 46608211
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| | ||||| |||||||||||||||| |||    
T  46608313 attatttatctttgtatattagtataaaaatatggtcaaagtaagttaggtcaaaatttcacattttcaaacaggtcatttattgcgggacggaggaagt 46608214  T
Q  101 aat 103  Q
    |||    
T  46608213 aat 46608211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 3708353 - 3708253
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||||||||| |||||||||||||| || |||||||||||| |  |||| ||||| ||||||||||||||    
T  3708353 attatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgtgggacggagggagt 3708254  T
Q  101 a 101  Q
    |    
T  3708253 a 3708253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 10384948 - 10384848
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| | ||| |||||||||||||| || |||||||||||| | ||||| ||||||||||||||||||||    
T  10384948 attatttatctttgtatattagtagaaaaatatggttaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagt 10384849  T
Q  101 a 101  Q
    |    
T  10384848 a 10384848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 42185374 - 42185271
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| ||| |||||||||| || || ||||||||||   |||||||||||||||||||||||||    
T  42185374 attatttatctttgtatattagtagaaaaatatggtcaaactaaattaggtcaaaattgcaaattttcaaatggatcatctattgcgggacggagggagt 42185275  T
Q  101 aatt 104  Q
    ||||    
T  42185274 aatt 42185271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 48336424 - 48336489
Alignment:
Q  34 gatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggag 99  Q
    ||||||| |||||||||||||| || |||||||||||||  |||||||||||||||||||||||||    
T  48336424 gatcaaagtaagttaggtcaaaattgcacattttcaaatgtgtcatctattgcgggacggagggag 48336489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 48380573 - 48380472
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| ||||||||||||||  | |||||||||||| | ||||  ||||||||||||||||||||    
T  48380573 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaaatgcacattttcaaacaggtcacttattgcgggacggagggagt 48380474  T
Q  101 aa 102  Q
    ||    
T  48380473 aa 48380472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 37667737 - 37667837
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||||||||||||| |       |||| ||||| ||| |||||||||| || |||||||||||| | ||||| ||||||||||||||||||||    
T  37667737 attatttatctttgtatattaatagaaaaatatggtcaaagtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagt 37667836  T
Q  101 a 101  Q
    |    
T  37667837 a 37667837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 43047487 - 43047387
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||| ||| || |||||||||||| ||||||| |||||||||| ||||| |||    
T  43047487 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggttaaaattgcacattttcaaacaagtcatttattgcgggatggaggaagt 43047388  T
Q  101 a 101  Q
    |    
T  43047387 a 43047387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 43447265 - 43447165
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| |  |||| |||| |||||||||||||||    
T  43447265 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattacgggacggagggagt 43447166  T
Q  101 a 101  Q
    |    
T  43447165 a 43447165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 47834107 - 47834202
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagg 96  Q
    |||||||||||||||||||||||       |||| ||||| ||||||| |||||| ||||||||||||||||  |||||| ||| |||||||||||    
T  47834107 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttatgtcaaaattacacattttcaaatgtgtcatccattccgggacggagg 47834202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 31657319 - 31657421
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||| |||||||||||       |||| ||||| |||| ||||||||| || || ||||| ||||| ||||| ||||||||||||||||||||    
T  31657319 attatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaatttttaaataggtcatttattgcgggacggagggagt 31657418  T
Q  101 aat 103  Q
    |||    
T  31657419 aat 31657421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 8525379 - 8525480
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||| ||||||||||||       |||||||||| |||||||||||||| || || ||||||||| | ||||| ||||  ||||||||||||||    
T  8525379 attatttatccttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattgcatattttcaaacaggtcatttattatgggacggagggagt 8525478  T
Q  101 aa 102  Q
    ||    
T  8525479 aa 8525480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 39376881 - 39376937
Alignment:
Q  47 taggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagtaat 103  Q
    ||||||||| || || |||||||| ||||||||||||||||||||||||||||||||    
T  39376881 taggtcaaaattgcaaattttcaactaagtcatctattgcgggacggagggagtaat 39376937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 40411571 - 40411672
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnn-tatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggag 99  Q
    |||||||||||||||||||||||        |||| ||||| |||||||||||||| || |||||||||||| | ||||| |||| ||||||||||||||    
T  40411571 attatttatctttgtatattagtaaaaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggag 40411670  T
Q  100 ta 101  Q
    ||    
T  40411671 ta 40411672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 6520535 - 6520432
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||| |||||||||||       |||  ||||| |||| ||||||||| || || ||||||||||| ||||| |||||||||||||| |||||    
T  6520535 attatttatctatgtatattagtagaaaaatatagtcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattgcgggacggatggagt 6520436  T
Q  101 aatt 104  Q
    ||||    
T  6520435 aatt 6520432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 101
Target Start/End: Original strand, 28899036 - 28899134
Alignment:
Q  3 tatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagta 101  Q
    ||||||||| |||||||||||       |||| ||||| |||  ||||||||| || || ||||||||||| ||||||||||||||||| |||||||||    
T  28899036 tatttatctatgtatattagtagaaatatatggtcaaagtaaactaggtcaaaattgcaaattttcaaataggtcatctattgcgggacagagggagta 28899134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 33394177 - 33394075
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||| ||||||||||       |||| ||||| |||||||||||||| || |||||||| ||||  |||| |||||| |||||||||| |||    
T  33394177 attatttatcttcgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacatttttaaatgggtcacctattgtgggacggaggaagt 33394078  T
Q  101 aat 103  Q
    |||    
T  33394077 aat 33394075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 24334344 - 24334444
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||| |||||||||||       |||| ||||| |||  ||||||||| || || ||||||||||| |||||||||||||||||  |||||||    
T  24334344 attatttatctatgtatattagtagaaatatatggtcaaagtaaactaggtcaaaattgcaaattttcaaataggtcatctattgcgggacaaagggagt 24334443  T
Q  101 a 101  Q
    |    
T  24334444 a 24334444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 28988357 - 28988457
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||| |||| ||||||       |||| ||||| |||  ||||||||  ||||| ||||||||||| ||||||||||||||||| ||||||||    
T  28988357 attatttatctatgtacattagtagaaaaatatggtcaaagtaaactaggtcaacattacaaattttcaaataggtcatctattgcgggactgagggagt 28988456  T
Q  101 a 101  Q
    |    
T  28988457 a 28988457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 95
Target Start/End: Original strand, 52818683 - 52818742
Alignment:
Q  36 tcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggag 95  Q
    ||||| ||| |||||| ||| |||||||||||||||| ||||||||||||||||| ||||    
T  52818683 tcaaagtaaattaggttaaaattacacattttcaaatgagtcatctattgcgggagggag 52818742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 37588494 - 37588595
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||| ||||||||||||        |||||||||| ||| |||  ||||| ||| ||||||| ||||  |||||||||||| |||||||||||||    
T  37588494 attatttatttttgtatattaggagaaaactatgatcaaagtaacttaaatcaaaattaaacatttttaaatgtgtcatctattgccggacggagggagt 37588593  T
Q  101 aa 102  Q
    ||    
T  37588594 aa 37588595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 1377603 - 1377503
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||| |||||||||||       |||| ||||| |||| ||||||||| || || ||||||||||| ||| | |||||||||||  |||||||    
T  1377603 attatttatctatgtatattagtagaaaaatatggtcaaagtaagataggtcaaaattgcaaattttcaaataggtcgtttattgcgggacaaagggagt 1377504  T
Q  101 a 101  Q
    |    
T  1377503 a 1377503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 29821150 - 29821050
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||| ||||||||||||||||||       |||| ||||| |||||||| ||||| || |||||||||||||   ||||||||| ||||||| | |||||    
T  29821150 attacttatctttgtatattagtagaaaaatatggtcaaagtaagttagatcaaaattgcacattttcaaatggatcatctattacgggacgaaaggagt 29821051  T
Q  101 a 101  Q
    |    
T  29821050 a 29821050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 39332793 - 39332893
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||  |||||||||||||       |||| ||||| |||||||| ||||| || |||||||||||| |  |||| ||||||| ||||||||||||    
T  39332793 attatttacttttgtatattagtagaaaaatatggtcaaagtaagttagttcaaaattgcacattttcaaacagatcatttattgcgtgacggagggagt 39332892  T
Q  101 a 101  Q
    |    
T  39332893 a 39332893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 18881379 - 18881420
Alignment:
Q  60 cacattttcaaataagtcatctattgcgggacggagggagta 101  Q
    |||||||||||||| |||||||||||  ||||||||||||||    
T  18881379 cacattttcaaataggtcatctattgtaggacggagggagta 18881420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 45299418 - 45299316
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| | ||||| ||||||||||||||||||||    
T  45299418 attatttatctttgtatattagtataaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagt 45299319  T
Q  101 aat 103  Q
    |||    
T  45299318 aat 45299316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 10100481 - 10100581
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| | ||||| ||||||||||||||||||||    
T  10100481 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggagggagt 10100580  T
Q  101 a 101  Q
    |    
T  10100581 a 10100581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 43453133 - 43453233
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||||||||||||| |       |||| |||||||||||||||||||| |||||||| | ||||| ||||||||| |||||||||||||||||    
T  43453133 attatttatctttgtatattaatagaaaaatatggtcaaaataagttaggtcaaaattacacatctgcaaatgagtcatctaatgcgggacggagggagt 43453232  T
Q  101 a 101  Q
    |    
T  43453233 a 43453233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 52749381 - 52749281
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| |||||||||||||||| ||| || |||||||||||| | ||||| ||||||||||||||||||||    
T  52749381 attatttatctttgtatattagtagaaaaatatggtcaaaataagttaggtaaaaattgcacattttcaaacaggtcatttattgcgggacggagggagt 52749282  T
Q  101 a 101  Q
    |    
T  52749281 a 52749281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 1821596 - 1821698
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||||||||||||| |       |||| ||||| |||||||||||||| || |||||||||||||| | |||||||||| |||||||||||||    
T  1821596 attatttatctttgtatattaatggaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaataggccatctattgccggacggagggagt 1821695  T
Q  101 aat 103  Q
    |||    
T  1821696 aat 1821698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 8048716 - 8048818
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||| |||||||||||       |||| |||||||||| ||||||||| || || ||||||||||| |||||||||||| |||||||||||||    
T  8048716 attatttatctatgtatattagtagaaaaatatggtcaaaataagctaggtcaaaattgcaaattttcaaataggtcatctattgcaggacggagggagt 8048815  T
Q  101 aat 103  Q
    |||    
T  8048816 aat 8048818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 10124209 - 10124108
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| | ||||| |||||||||| ||| |||||    
T  10124209 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggatggatggagt 10124110  T
Q  101 aa 102  Q
    ||    
T  10124109 aa 10124108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 2126752 - 2126652
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||| ||||||||||| |       |||| ||||| ||| |||||||||| ||||||||||| |||||||||||||||||||| | |||||||||    
T  2126752 attatttatttttgtatattaataaaaaaatatggtcaaagtaaattaggtcaaaattacacatttttaaataagtcatctattgcggaatggagggagt 2126653  T
Q  101 a 101  Q
    |    
T  2126652 a 2126652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 5606359 - 5606459
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| | ||| |||||||| ||||| || ||| |||||||||| ||||| ||||||||||||||||||||    
T  5606359 attatttatctttgtatattagtagaaaaatatggttaaagtaagttagatcaaaattgcactttttcaaataggtcatttattgcgggacggagggagt 5606458  T
Q  101 a 101  Q
    |    
T  5606459 a 5606459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 7075298 - 7075398
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||| ||||| || ||| |||||||| ||||||| |||||||||| |||||||||    
T  7075298 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttagatcaaaattgcacgttttcaaacaagtcatttattgcgggatggagggagt 7075397  T
Q  101 a 101  Q
    |    
T  7075398 a 7075398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 8251117 - 8251217
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||||||||||||| |       |||| ||||| |||||||| ||||| || |||||||||||| | ||||| ||||||||||||||||||||    
T  8251117 attatttatctttgtatattattaagaaaatatggtcaaagtaagttagatcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagt 8251216  T
Q  101 a 101  Q
    |    
T  8251217 a 8251217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 48312128 - 48312029
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       || ||||||||||||||| | |||| || |||||||||||||  ||||||||||||||||| ||||||||    
T  48312128 attatttatctttgtatattagtagaaaaatacgatcaaaataagttaagccaaaattgcacattttcaaatg-gtcatctattgcgggactgagggagt 48312030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 44452295 - 44452197
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggag 99  Q
    |||||| |||||||||| |||||       |||| ||||| |||||||||||||| ||||||||||||||||  | ||||||||||||||| |||||||    
T  44452295 attattcatctttgtatgttagtagaaaaatatggtcaaagtaagttaggtcaaaattacacattttcaaatgggacatctattgcgggacagagggag 44452197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 5945865 - 5945765
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| | ||||||| ||| |||||| || |||||||||||| | ||||| ||||||||||||||| ||||    
T  5945865 attatttatctttgtatattagtagaaaaatatggttaaaataaattatgtcaaaattgcacattttcaaacatgtcatttattgcgggacggagagagt 5945766  T
Q  101 a 101  Q
    |    
T  5945765 a 5945765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 6017417 - 6017517
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||| ||||| || |||||||||||| |  |||| |||||||||||||||| |||    
T  6017417 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttagatcaaaattgcacattttcaaacagatcatttattgcgggacggaggaagt 6017516  T
Q  101 a 101  Q
    |    
T  6017517 a 6017517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 31932146 - 31932246
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||| |||||||||||||       |||| ||||| |||  ||||||||| || || |||||||||||  |||||||||||||||||||||||||    
T  31932146 attatttatatttgtatattagtagaaaaatatggtcaaagtaaactaggtcaaaattgcaaattttcaaatagatcatctattgcgggacggagggagt 31932245  T
Q  101 a 101  Q
    |    
T  31932246 a 31932246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 41414303 - 41414203
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||| |||||||||||       |||| ||||| |||| ||||||||| || || ||||||||||| || ||||||||| |||||||||||||    
T  41414303 attatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaattttcaaataggtaatctattgcaggacggagggagt 41414204  T
Q  101 a 101  Q
    |    
T  41414203 a 41414203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 41855689 - 41855789
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||| |||||||||||       |||| ||||| |||| ||||||||| || || ||||||||||| ||||| |||| |||||||||||||||    
T  41855689 attatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattacgggacggagggagt 41855788  T
Q  101 a 101  Q
    |    
T  41855789 a 41855789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 44240619 - 44240519
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||| |||||||||||       |||| ||||| |||| ||||||||| || || ||||| ||||| ||||| ||||||||||||||||||||    
T  44240619 attatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaatttttaaataggtcatttattgcgggacggagggagt 44240520  T
Q  101 a 101  Q
    |    
T  44240519 a 44240519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 50014529 - 50014629
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||| |||||||||||       |||| ||||| |||| ||| ||||| || || |||||||||||||||||||||  |||||||||||||||    
T  50014529 attatttatctatgtatattagtagaaaaatatggtcaaagtaagctagatcaaaattgcaaattttcaaataagtcatctatgacgggacggagggagt 50014628  T
Q  101 a 101  Q
    |    
T  50014629 a 50014629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 44741443 - 44741356
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgg 88  Q
    |||||||||||||||||||||||       |||| |||||||||||||| ||||| || ||||| |||||||| ||||| ||||||||    
T  44741443 attatttatctttgtatattagtagaaaaatatggtcaaaataagttagatcaaaattgcacatattcaaatatgtcatttattgcgg 44741356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 47912381 - 47912278
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||||||| ||| |||||| ||||||||||| ||| | || ||||||||| ||| |||| ||||    
T  47912381 attatttatctttgtatattagtagaaaaatatggtcaaaataaattatgtcaaaattacacatttttaaagaggtaatctattgcaggatggagagagt 47912282  T
Q  101 aatt 104  Q
    ||||    
T  47912281 aatt 47912278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 10648199 - 10648252
Alignment:
Q  31 tatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctatt 84  Q
    |||| |||||||||||||||||||| |||||||||||||||||  |||||||||    
T  10648199 tatggtcaaaataagttaggtcaaaattacacattttcaaatagatcatctatt 10648252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 26543968 - 26543874
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggag 95  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| ||  ||||||||||| |  |||| |||||||||||||||    
T  26543968 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgtacattttcaaacagatcatttattgcgggacggag 26543874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 28490211 - 28490160
Alignment:
Q  50 gtcaaagttacacattttcaaataagtcatctattgcgggacggagggagta 101  Q
    |||||| || || ||||||||||| |||||||||||||||||||||||||||    
T  28490211 gtcaaaattgcaaattttcaaataggtcatctattgcgggacggagggagta 28490160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 40883509 - 40883417
Alignment:
Q  3 tatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggag 95  Q
    ||||||| |||||||||||||       |||||||||| |||||||||||||| || |||||||| ||||   ||||||||||||||| ||||    
T  40883509 tatttatatttgtatattagttgaaaaatatgatcaaagtaagttaggtcaaaatttcacatttttaaatggatcatctattgcgggatggag 40883417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 12685896 - 12685966
Alignment:
Q  31 tatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagta 101  Q
    |||||||||||||| |||| ||||| || ||||||||||||   |||||||||| ||||||| ||||||||    
T  12685896 tatgatcaaaataaattagatcaaaattgcacattttcaaacgggtcatctattacgggacgaagggagta 12685966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 23337907 - 23337836
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaat 72  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| ||||| ||||||||||    
T  23337907 attatttatctttgtatattagtagaaaaatatggtcaaactaagttaggtcaaatttacaaattttcaaat 23337836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 29253549 - 29253479
Alignment:
Q  31 tatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagta 101  Q
    |||| ||||| |||| ||||||||| || || |||||||||||  ||||||||||||||||||| ||||||    
T  29253549 tatggtcaaagtaagctaggtcaaaattgcaaattttcaaatagatcatctattgcgggacggatggagta 29253479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 31651869 - 31651960
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacg 92  Q
    |||||||||||||||||||||||       |||| ||||| ||||  |||| ||| || |||||||||||||| ||||| ||||||||||||    
T  31651869 attatttatctttgtatattagtagaaaaatatggtcaaattaagccaggttaaaattgcacattttcaaataggtcatttattgcgggacg 31651960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 49903653 - 49903740
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgg 88  Q
    |||||||||||||||||||||||       |||||||||| ||| |||||||||| || |||||||| ||||   |||||||||||||    
T  49903653 attatttatctttgtatattagtagaaaaatatgatcaaagtaaattaggtcaaaatttcacatttttaaatggatcatctattgcgg 49903740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 84
Target Start/End: Original strand, 27581039 - 27581120
Alignment:
Q  3 tatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctatt 84  Q
    ||||||||||||||||||| |       |||||||||| || ||||||||||| ||||| ||| |||||||| |||||||||    
T  27581039 tatttatctttgtatattattagaaaaatatgatcaaagtatgttaggtcaaaattacatattgtcaaataaatcatctatt 27581120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 36035786 - 36035701
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgc 86  Q
    |||||||||||||||||||||||       |||||||||| ||| |||| ||||| ||||||||||| ||| | ||||| ||||||    
T  36035786 attatttatctttgtatattagtagaaaaatatgatcaaagtaaattagatcaaaattacacatttttaaacaggtcatttattgc 36035701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 33526130 - 33526230
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||| |||||||||||||       |||  ||||| ||| |||| ||||| ||||||||||| |||| | |||||||||||| |||||| |||||    
T  33526130 attatttatttttgtatattagtagaaaaatatagtcaaagtaaattagatcaaaattacacatttttaaatgaatcatctattgcgagacggatggagt 33526229  T
Q  101 a 101  Q
    |    
T  33526230 a 33526230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 52688594 - 52688540
Alignment:
Q  36 tcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggac 91  Q
    ||||| |||||||||||||| || ||||||||||||| | ||||||||||||||||    
T  52688594 tcaaagtaagttaggtcaaaattccacattttcaaatga-tcatctattgcgggac 52688540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 48389166 - 48389081
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgc 86  Q
    ||||||||||| |||||||||||       |||| ||||| |||| ||||||||| || || ||||||||||| ||||| ||||||    
T  48389166 attatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattgc 48389081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 1e-21; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 30464532 - 30464431
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| | ||||| ||||||||||||||||||||    
T  30464532 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggagggagt 30464433  T
Q  101 aa 102  Q
    ||    
T  30464432 aa 30464431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 4327080 - 4327180
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||||||||| |||||||| ||||| || |||||||||||| ||||||| |||||||||||| |||||||    
T  4327080 attatttatctttgtatattagtagaaaaatatgatcaaagtaagttagatcaaaattgcacattttcaaacaagtcatttattgcgggacgcagggagt 4327179  T
Q  101 a 101  Q
    |    
T  4327180 a 4327180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 20671356 - 20671256
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| ||||||||||||||||   |||||||||||| ||||||||||||    
T  20671356 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattacacattttcaaattgatcatctattgcgcgacggagggagt 20671257  T
Q  101 a 101  Q
    |    
T  20671256 a 20671256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 3466383 - 3466282
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       ||  |||||| |||||||||||||| || | |||||||||||  ||||||||||||||||||||||||||    
T  3466383 attatttatctttgtatattagtagaaaaataaaatcaaagtaagttaggtcaaaattgcgcattttcaaatgggtcatctattgcgggacggagggagt 3466284  T
Q  101 aa 102  Q
    ||    
T  3466283 aa 3466282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 40645709 - 40645609
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||||||||| |||||||||||||| ||  | ||||||||||  | ||||||||||||||||||||||||    
T  40645709 attatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattgaaaattttcaaatgggccatctattgcgggacggagggagt 40645610  T
Q  101 a 101  Q
    |    
T  40645609 a 40645609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 44887676 - 44887776
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| ||||| |||||||| || ||||||||||||||  |||| ||||||||||||||||||||    
T  44887676 attatttatctttgtatattagtagaaaaatatggtcaaactaagtcaggtcaaaattgcacattttcaaatagatcatttattgcgggacggagggagt 44887775  T
Q  101 a 101  Q
    |    
T  44887776 a 44887776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 38842263 - 38842161
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacaca-ttttcaaataagtcatctattgcgggacggagggag 99  Q
    |||||||||||||||||||||||       |||||||||| |||||||||||||| ||||||| |||||||| | ||||| |||| ||||||||||| ||    
T  38842263 attatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattacacatttttcaaacaggtcatttattacgggacggaggaag 38842164  T
Q  100 taa 102  Q
    |||    
T  38842163 taa 38842161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 25691558 - 25691659
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| | ||||| |||||||| ||||| |||||    
T  25691558 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacatgtcatttattgcggaacggatggagt 25691657  T
Q  101 aa 102  Q
    ||    
T  25691658 aa 25691659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 31 - 102
Target Start/End: Complemental strand, 11756846 - 11756775
Alignment:
Q  31 tatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagtaa 102  Q
    |||| ||||| |||||||||||||| || || |||||||||||||||||||||||||| || ||||||||||    
T  11756846 tatggtcaaagtaagttaggtcaaaattgcaaattttcaaataagtcatctattgcggaacagagggagtaa 11756775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 23437774 - 23437874
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| |||||  || |||||||||| || |||||||||||| | ||||| ||||||||||||||||||||    
T  23437774 attatttatctttgtatattagtagaaaaatatggtcaaagcaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagt 23437873  T
Q  101 a 101  Q
    |    
T  23437874 a 23437874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 28583294 - 28583364
Alignment:
Q  31 tatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagta 101  Q
    |||| ||||| ||| |||||||||| || |||||||||||| | |||||||||||||||||||||||||||    
T  28583294 tatgctcaaagtaaattaggtcaaaattgcacattttcaaaaaggtcatctattgcgggacggagggagta 28583364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 101
Target Start/End: Complemental strand, 44717366 - 44717296
Alignment:
Q  31 tatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagta 101  Q
    |||||||||| |||||||| ||||| ||||||||||||||||   ||||| ||||||||||||||||||||    
T  44717366 tatgatcaaagtaagttagttcaaaattacacattttcaaatggatcatccattgcgggacggagggagta 44717296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 761650 - 761549
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||  |||||||||||||       |||| ||||| ||| |||||||||| ||||||||||||||| | ||||| ||||||||||| ||||||||    
T  761650 attatttaaatttgtatattagtagaaaaatatggtcaaagtaaattaggtcaaaattacacattttcaaacaggtcatttattgcgggacagagggagt 761551  T
Q  101 aa 102  Q
    ||    
T  761550 aa 761549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 29917889 - 29917981
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacgga 94  Q
    |||||||||||||||||||||||       |||| |||||||||||||||||||| ||||||||||| ||||   ||||||||||| |||||||    
T  29917889 attatttatctttgtatattagtagaaaaatatggtcaaaataagttaggtcaaaattacacatttt-aaatggatcatctattgcaggacgga 29917981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 37094232 - 37094132
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||| |||||||||||       |||| ||||| |||| ||||||||| || || ||||||||||| ||||| |||||||||||||||| |||    
T  37094232 attatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaattttcaaataggtcatttattgcgggacggaggaagt 37094133  T
Q  101 a 101  Q
    |    
T  37094132 a 37094132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 8058985 - 8059085
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||||||||||| |  ||| ||||||||||||||||   |||||||||||| |||||| |||||    
T  8058985 attatttatctttgtatattagtaaaaaaatatggtcaaaataagttaag--aaaattacacattttcaaattgatcatctattgcgtgacggaaggagt 8059082  T
Q  101 aat 103  Q
    |||    
T  8059083 aat 8059085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 23547168 - 23547061
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       ||| |||||| |||||||| ||||| ||||||| ||| ||| | ||||| ||||  ||||||||||||||    
T  23547168 attatttatctttgtatattagtagaaaaatattatcaaagtaagttagatcaaaattacacaattttaaacaggtcatttattatgggacggagggagt 23547069  T
Q  101 aattaaga 108  Q
    ||| ||||    
T  23547068 aataaaga 23547061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 25009244 - 25009141
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| ||| |||||||||| || |||||||||||| |  |||| ||||| |||||||||| |||    
T  25009244 attatttatctttgtatattagtagaaaaatatggtcaaagtaaattaggtcaaaattgcacattttcaaacagatcatttattgagggacggaggaagt 25009145  T
Q  101 aatt 104  Q
    ||||    
T  25009144 aatt 25009141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 25118886 - 25118803
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctatt 84  Q
    |||||||||||||||||||||||        | | |||||||| |||||||||||  |||||||||||||||||||||||||||    
T  25118886 attatttatctttgtatattagtagaaaaagaaggtcaaaatatgttaggtcaaaagtacacattttcaaataagtcatctatt 25118803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 8496847 - 8496949
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||| ||       |||| ||||| |||||||||||||| || |||||||||||||  |||| ||||| | |||||||| ||||    
T  8496847 attatttatctttgtatattcgtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaatgggtcaactattacaggacggagagagt 8496946  T
Q  101 aat 103  Q
    |||    
T  8496947 aat 8496949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 14378647 - 14378749
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||||| |||||||||       |||  ||||| |||||||||||||| || ||||||||||||    |||| ||||||||||||||||||||    
T  14378647 attatttatctttatatattagtagaaaaatatagtcaaagtaagttaggtcaaaattgcacattttcaaacctatcatttattgcgggacggagggagt 14378746  T
Q  101 aat 103  Q
    |||    
T  14378747 aat 14378749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 43184740 - 43184841
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||| |||||||||||||       |||| ||||| |||||||||||||| | ||||||||| ||| | ||||| |||||| ||| |||||||||    
T  43184740 attatttatttttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaataacacatttttaaacaggtcatttattgcaggatggagggagt 43184839  T
Q  101 aa 102  Q
    ||    
T  43184840 aa 43184841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 4960251 - 4960151
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||| |||||||||||       |||| ||||| |||| ||||||||| || || |||||||||||  ||||||||| ||||||||| |||||    
T  4960251 attatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaattttcaaatagatcatctattacgggacggaaggagt 4960152  T
Q  101 a 101  Q
    |    
T  4960151 a 4960151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 5777515 - 5777615
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| | |||||||| ||| ||||| ||||||||||||||| | ||||| |||||| ||| ||| |||||    
T  5777515 attatttatctttgtatattagtagaaaaatatggttaaaataagatagatcaaaattacacattttcaaacaggtcatttattgcaggatggatggagt 5777614  T
Q  101 a 101  Q
    |    
T  5777615 a 5777615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 14584168 - 14584268
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||| |||||||||||       |||||||||| |||| ||| ||||| ||| | |||||||||||  |||||||||  ||||||||||||||    
T  14584168 attatttatctatgtatattagtaaaaaaatatgatcaaagtaagctagatcaaaattataaattttcaaatagatcatctattatgggacggagggagt 14584267  T
Q  101 a 101  Q
    |    
T  14584268 a 14584268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 8123715 - 8123653
Alignment:
Q  41 ataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagtaat 103  Q
    ||||||||||||||| ||||||||||| ||||   ||||||||||| | ||||||||||||||    
T  8123715 ataagttaggtcaaaattacacatttttaaatggatcatctattgcagaacggagggagtaat 8123653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 30653460 - 30653360
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||| | ||| || |||||||| ||||  | |||||||| ||||||||| |||||    
T  30653460 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttagattaaaattgcacatttttaaattgggcatctattacgggacggatggagt 30653361  T
Q  101 a 101  Q
    |    
T  30653360 a 30653360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 44362021 - 44361921
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||| |||||||||||       |||| ||||| |||  ||| ||||| || || ||||||||||| ||||||||||||||||  ||||||||    
T  44362021 attatttatctatgtatattagtagaaatatatggtcaaagtaaactagctcaaaattgcaaattttcaaataggtcatctattgcgggaatgagggagt 44361922  T
Q  101 a 101  Q
    |    
T  44361921 a 44361921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 27301962 - 27301860
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||  ||||| ||| |||  ||||| ||  | |||||||||| |||||||||||||  ||||||||||||    
T  27301962 attatttatctttgtatattagtagaaaaatattgtcaaagtaaattatatcaaaattgaatattttcaaatgagtcatctattgcaagacggagggagt 27301863  T
Q  101 aat 103  Q
    |||    
T  27301862 aat 27301860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 43049230 - 43049323
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacgga 94  Q
    ||||||||||| |||||||||||       |||| ||||| | || ||| ||||| ||||| |||||||||||  |||| ||||||||||||||    
T  43049230 attatttatctatgtatattagtagaaaaatatggtcaaagttagctagatcaaaattacaaattttcaaatagatcatttattgcgggacgga 43049323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 1e-21; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 30721649 - 30721750
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||||||||||||| |       |||| |||||||||||||||||||| || |||||||||||||| ||||| |||||||||| |||||||||    
T  30721649 attatttatctttgtatattaatagaaaaatatggtcaaaataagttaggtcaaaattgcacattttcaaatatgtcatttattgcgggatggagggagt 30721748  T
Q  101 aa 102  Q
    ||    
T  30721749 aa 30721750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 1098275 - 1098175
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| | ||||| ||||||||||||||||||||    
T  1098275 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagt 1098176  T
Q  101 a 101  Q
    |    
T  1098175 a 1098175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 19344663 - 19344763
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| |||||||||||||||||||| || |||||||||||| | ||||| |||||||||||||| |||||    
T  19344663 attatttatctttgtatattagtagaaaaatatggtcaaaataagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggaaggagt 19344762  T
Q  101 a 101  Q
    |    
T  19344763 a 19344763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 27675640 - 27675540
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||| |||||||||||       |||||||||| |||| ||||||||| || || ||||||||||||||||| ||||||||||||||||||||    
T  27675640 attatttatctatgtatattagtagaaaaatatgatcaaagtaagctaggtcaaaattgcaaattttcaaataagtcatttattgcgggacggagggagt 27675541  T
Q  101 a 101  Q
    |    
T  27675540 a 27675540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 33402555 - 33402655
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||||||||| |||||||||||||| ||||||||||| ||| |  ||||||||| |||||||||||||||    
T  33402555 attatttatctttgtatattagtagaaaaatatgatcaaagtaagttaggtcaaaattacacatttttaaacagatcatctattacgggacggagggagt 33402654  T
Q  101 a 101  Q
    |    
T  33402655 a 33402655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 8627235 - 8627142
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacgga 94  Q
    |||||||||||||||||||||||       |||| ||||| |||||||| ||||| || |||||||||||||| ||||||||||||||||||||    
T  8627235 attatttatctttgtatattagtaaaaaaatatggtcaaagtaagttagatcaaaattgcacattttcaaataggtcatctattgcgggacgga 8627142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 20040379 - 20040480
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| | ||||| |||| |||||||||||||||    
T  20040379 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattacgggacggagggagt 20040478  T
Q  101 aa 102  Q
    ||    
T  20040479 aa 20040480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 1781109 - 1781209
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| ||| |||||||||| || |||||||||||| | ||||| ||||||||||||||||||||    
T  1781109 attatttatctttgtatattagtagaaaaatatggtcaaagtaacttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagt 1781208  T
Q  101 a 101  Q
    |    
T  1781209 a 1781209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 30788305 - 30788205
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| ||||||| |||||| ||||||||||||||||  ||||| |||| |||||||||||||||    
T  30788305 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttatgtcaaaattacacattttcaaatgggtcatatattacgggacggagggagt 30788206  T
Q  101 a 101  Q
    |    
T  30788205 a 30788205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 9936852 - 9936954
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||||||| |||| ||||| || |||||||| |||||  |||| ||||||||||||||||||||    
T  9936852 attatttatctttgtatattagtagaaaaatatggtcaaaataaattagatcaaaattgcacatttttaaatatatcatttattgcgggacggagggagt 9936951  T
Q  101 aat 103  Q
    |||    
T  9936952 aat 9936954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 31191141 - 31191241
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||||||||||||| |       |||| ||||| ||| |||||||||| || |||||||||||| | ||||| ||||||||||||||||||||    
T  31191141 attatttatctttgtatattaatagaaaaatatggtcaaagtaaattaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggagggagt 31191240  T
Q  101 a 101  Q
    |    
T  31191241 a 31191241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 40316918 - 40316818
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| || || ||| |||||||||| || |||||||||||| | ||||| ||||||||||||||||||||    
T  40316918 attatttatctttgtatattagtagaaaaatatggtcgaagtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagt 40316819  T
Q  101 a 101  Q
    |    
T  40316818 a 40316818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 41410623 - 41410723
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| || || ||| |||||||||| || |||||||||||| | ||||| ||||||||||||||||||||    
T  41410623 attatttatctttgtatattagtagaaaaatatggtcgaagtaaattaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagt 41410722  T
Q  101 a 101  Q
    |    
T  41410723 a 41410723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 13548313 - 13548212
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| | ||||  ||||  ||||||||||||||    
T  13548313 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcacttattaagggacggagggagt 13548214  T
Q  101 aa 102  Q
    ||    
T  13548213 aa 13548212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 14057808 - 14057711
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggaggga 98  Q
    ||||||||||||||||||||| |       |||||||||| |||||||||||||| || || ||||||||| |  |||| ||||||||||||||||||    
T  14057808 attatttatctttgtatattaatagaaaaatatgatcaaagtaagttaggtcaaaattgcatattttcaaacagatcatttattgcgggacggaggga 14057711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 14607521 - 14607618
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggaggga 98  Q
    |||| ||||||||||||||||||       |||| ||||| ||| |||||||||| || |||||||||||| | ||||| ||||||||||||||||||    
T  14607521 attacttatctttgtatattagtagaaaaatatggtcaaattaaattaggtcaaaattgcacattttcaaacatgtcatttattgcgggacggaggga 14607618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 10465289 - 10465360
Alignment:
Q  31 tatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagtaa 102  Q
    |||| ||||| |||| ||||||||| ||| | ||||||||||| |||||||||||||||| |||||||||||    
T  10465289 tatggtcaaagtaagataggtcaaaattataaattttcaaataggtcatctattgcgggagggagggagtaa 10465360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 14633107 - 14633007
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||| ||       |||| ||||| |||||||||||||| || |||||||||||| |  |||| |||||| |||||||||||||    
T  14633107 attatttatctttgtatatttgtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacagatcatttattgcaggacggagggagt 14633008  T
Q  101 a 101  Q
    |    
T  14633007 a 14633007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 20022960 - 20022860
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| | ||||| ||||||| || ||||| |||    
T  20022960 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgagaaggaggaagt 20022861  T
Q  101 a 101  Q
    |    
T  20022860 a 20022860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 32473986 - 32474086
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||||||||||| || ||| ||||||||||||||||  ||||||||||   |||||| ||||||    
T  32473986 attatttatctttgtatattagtagaaaaatatggtcaaaataagttatgttaaaattacacattttcaaatgggtcatctatttttggacggggggagt 32474085  T
Q  101 a 101  Q
    |    
T  32474086 a 32474086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 34347537 - 34347474
Alignment:
Q  31 tatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacgga 94  Q
    |||| ||||| ||||||| |||||| ||||||||||||||||| |||||||||||||| |||||    
T  34347537 tatggtcaaagtaagttatgtcaaaattacacattttcaaataggtcatctattgcggaacgga 34347474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 41263093 - 41263193
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||| ||| |  |||| ||||| ||||||||||||||    
T  41263093 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacatttttaaacatatcatttattgagggacggagggagt 41263192  T
Q  101 a 101  Q
    |    
T  41263193 a 41263193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 40080081 - 40079978
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||| |||||||||||       |||| ||||| |||||||||| ||| ||  | ||||||||||| |||||||||||  |||||||||||||    
T  40080081 attatttatctatgtatattagtagaaaaatatggtcaaagtaagttaggttaaaattgtaaattttcaaataggtcatctattgtaggacggagggagt 40079982  T
Q  101 aatt 104  Q
    ||||    
T  40079981 aatt 40079978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 30211705 - 30211799
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggag 95  Q
    |||||||||||||||||||||||       |||| ||||| |||||||| ||||| || |||||||| ||| | ||||| |||||||||||||||    
T  30211705 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttagatcaaaattgcacatttttaaacaggtcatttattgcgggacggag 30211799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 39925304 - 39925203
Alignment:
Q  1 attatttatctttgtatattag-tnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggag 99  Q
    |||||||||||||||||||||| |       |||| ||||| ||| || ||||||| ||||| ||||||||||   ||||||||||||||||||||||||    
T  39925304 attatttatctttgtatattaggtaaaataatatggtcaaagtaaatttggtcaaaattacaaattttcaaatggatcatctattgcgggacggagggag 39925205  T
Q  100 ta 101  Q
    ||    
T  39925204 ta 39925203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 1831451 - 1831351
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||| |||||||||||||||||       |||| || || ||| ||| |||||| || |||||||||||| | ||||| ||||||||||||||||||||    
T  1831451 attatatatctttgtatattagtagaaaaatatggtcgaagtaaattatgtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagt 1831352  T
Q  101 a 101  Q
    |    
T  1831351 a 1831351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 2551591 - 2551694
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||||| |||||||||       |||| | |||||||||||||||||| || |||||||| ||||  |||||||||| | |||| |||| |||    
T  2551591 attatttatctttatatattagtagaaaaatatggttaaaataagttaggtcaaaattgcacatttttaaatgggtcatctatttcaggactgaggaagt 2551690  T
Q  101 aatt 104  Q
    ||||    
T  2551691 aatt 2551694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 39104243 - 39104344
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagt-catctattgcgggacggagggag 99  Q
    |||||||||||||||||||||||       |||| ||||| ||| |||  ||||| ||||||||||| ||||| || |||||||| |||||||||| |||    
T  39104243 attatttatctttgtatattagtagaaaaatatggtcaaattaaattatatcaaaattacacatttttaaataggtccatctattacgggacggagagag 39104342  T
Q  100 ta 101  Q
    ||    
T  39104343 ta 39104344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 99
Target Start/End: Complemental strand, 14355564 - 14355502
Alignment:
Q  36 tcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggag 99  Q
    |||| |||| |||||||||| ||||||||||| |||||| ||||||| |||| |||||||||||    
T  14355564 tcaagataaattaggtcaaaattacacatttttaaataa-tcatctagtgcgagacggagggag 14355502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 2799696 - 2799638
Alignment:
Q  36 tcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacgga 94  Q
    ||||| |||||||||||||| || |||||||||||||  |||||||||| ||| |||||    
T  2799696 tcaaagtaagttaggtcaaaattgcacattttcaaatgggtcatctattacggaacgga 2799638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 967251 - 967203
Alignment:
Q  42 taagttaggtcaaagttacacattttcaaataagtcatctattgcggga 90  Q
    |||||||||||||| || || |||||||||| ||| |||||||||||||    
T  967251 taagttaggtcaaaattgcaaattttcaaatgagttatctattgcggga 967203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 34169929 - 34169832
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggaggga 98  Q
    ||||||||||| |||||||||||       |||| ||||| |||  ||| ||||| || || |||||||||||  ||||||||||||||||| |||||    
T  34169929 attatttatctatgtatattagtagaaaaatatggtcaaagtaaactagatcaaaattgcaaattttcaaatagatcatctattgcgggacgaaggga 34169832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 5476 - 5376
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| | ||||| ||||||||||||||||||||    
T  5476 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggtcatttattgcgggacggagggagt 5377  T
Q  101 a 101  Q
    |    
T  5376 a 5376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 639 - 739
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || || ||||||||||  ||||||||||||||| ||||||||||    
T  639 attatttatctttgtatattagtagaaaaatatggtcaaactaagttaggtcaaaattgcatattttcaaatgggtcatctattgcggggcggagggagt 738  T
Q  101 a 101  Q
    |    
T  739 a 739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 99
Target Start/End: Original strand, 23946 - 24011
Alignment:
Q  34 gatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggag 99  Q
    ||||||| |||||||||||||| || |||||||||||||  |||||||||||||||||||||||||    
T  23946 gatcaaagtaagttaggtcaaaattgcacattttcaaatgtgtcatctattgcgggacggagggag 24011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 184066 - 183966
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||||||||||||       |||| ||||| |||||||||||||| || |||||||||||| | || || ||||||| ||||||||||||    
T  184066 attatttatctttgtatattagtagaaaaatatggtcaaagtaagttaggtcaaaattgcacattttcaaacaggttatttattgcgagacggagggagt 183967  T
Q  101 a 101  Q
    |    
T  183966 a 183966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1248 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 1420 - 1520
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||| |||||||||||||       |||| ||||| ||||||| |||||| ||||||||||| |||||| ||||||||| ||||| |||| ||||    
T  1420 attatttatttttgtatattagtagaaaaatatggtcaaagtaagttatgtcaaaattacacatttttaaataaatcatctattacgggatggagagagt 1519  T
Q  101 a 101  Q
    |    
T  1520 a 1520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0952 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 893 - 793
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||| |||||||||||||       |||| ||||| ||||||| |||||| ||||||||||| |||||| ||||||||| ||||| |||| ||||    
T  893 attatttatttttgtatattagtagaaaaatatggtcaaagtaagttatgtcaaaattacacatttttaaataaatcatctattacgggatggagagagt 794  T
Q  101 a 101  Q
    |    
T  793 a 793  T

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Target: scaffold0069 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 4541 - 4441
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    |||||||||||||| ||||||||       || | |||||||||||||||||||| || |||||||| |||| | |||| |||||| ||||||| |||||    
T  4541 attatttatctttgcatattagtagaaaaatacggtcaaaataagttaggtcaaaattgcacatttttaaatgaatcatttattgcaggacggaaggagt 4442  T
Q  101 a 101  Q
    |    
T  4441 a 4441  T

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Target: scaffold0281 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 13204 - 13104
Alignment:
Q  1 attatttatctttgtatattagtnnnnnnntatgatcaaaataagttaggtcaaagttacacattttcaaataagtcatctattgcgggacggagggagt 100  Q
    ||||||||||| |||||||||||       |||| ||||| |||| ||||||||| || || ||||| ||| | ||||| ||||| ||||||||||||||    
T  13204 attatttatctatgtatattagtagaaaaatatggtcaaagtaagctaggtcaaaattgcaaatttttaaacaggtcatttattgtgggacggagggagt 13105  T
Q  101 a 101  Q
    |    
T  13104 a 13104  T

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