View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13893_high_21 (Length: 264)
Name: NF13893_high_21
Description: NF13893
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13893_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 261
Target Start/End: Complemental strand, 36403452 - 36403195
Alignment:
| Q |
1 |
ttccattcactaacaacctcaaaacacacacactatcactataccatgcttgaatgaaatctcttcactttgttgtttcataacaaacttaccctccgta |
100 |
Q |
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| T |
36403452 |
ttccattcactaacaacctcaaaacacacacactatcactataccatgcttgaatgaaatctcttcactttgttgtttcataacaaactttccctccgta |
36403353 |
T |
|
| Q |
101 |
ctattgagattgtacacatgttgaataataatctaaatacttccaccagccatatatcagaggaaaaccaagaagatgaacaaataacagaaataagaga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36403352 |
ctattgagattgtacacatgttgaataataatctaaatacttccaccagccatatatcagaggaaaaccaagaagatgaacaaataacagaaataagaga |
36403253 |
T |
|
| Q |
201 |
aatccatgccttaacaccacctcgtcttccacctcctcctccaccaccaaccaaccgcggc |
261 |
Q |
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||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
36403252 |
aatccatgccttaacaccacctcgtcttccacctc---ctccaccaccaaccaaccgcggc |
36403195 |
T |
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