View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13897_low_14 (Length: 337)
Name: NF13897_low_14
Description: NF13897
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13897_low_14 |
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Alignment Details
Target: chr2 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 1 - 331
Target Start/End: Original strand, 8914302 - 8914632
Alignment:
| Q |
1 |
aaactctatgtacaaaataaataaaaatacatttcttcacaatcatatgaacggaccaacaataataacttcaacactatccaaaaccagtctatttttc |
100 |
Q |
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| T |
8914302 |
aaactctatgtacaaaataaataaaaatacatttcgtcacaatcatatgaacggaccaacaataataacttcaacactatccaaaaccagtttatttttc |
8914401 |
T |
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| Q |
101 |
tttaagccaaatcctatacttaagcatatttacttaccatatgcttatgcttttgttgagggttactttctcttgaatccacttagcgatattttttctc |
200 |
Q |
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| T |
8914402 |
tttaagccaaatcctatacttaagcatatttacttaccatatgcttatgcttttgttgagggttactttctcttgaatccactttgcgatattttttctc |
8914501 |
T |
|
| Q |
201 |
tttctatcattcttaatagcagtgttagattccatatagattaggtctccctaattttatattttgttgaatttgtttaggaatgcaccatctttttgtt |
300 |
Q |
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| T |
8914502 |
tttctatcattcttaatagcagtgttagattccatatagattaggtctccctaattttatattttgttgaatttgtttagggttgcaccatctttttgtt |
8914601 |
T |
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| Q |
301 |
ttctttatttcttatcaaatgatattcttgg |
331 |
Q |
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|||||||||||||||||||||||||| |||| |
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| T |
8914602 |
ttctttatttcttatcaaatgatatttttgg |
8914632 |
T |
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