View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13897_low_15 (Length: 315)
Name: NF13897_low_15
Description: NF13897
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13897_low_15 |
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Alignment Details
Target: chr8 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 30 - 303
Target Start/End: Complemental strand, 37280216 - 37279943
Alignment:
| Q |
30 |
aaatatttggatcctctacaaacctaatgatacaacatatcgtagattgaggcggaaaaaagttggcttgagctagactttataatcgtcgagtatagta |
129 |
Q |
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| T |
37280216 |
aaatatttggatcctctacaaacctaatgatacaacatatcgtagattgaggcggaaaaaagttggcttgagctagactttataatcgtcgagtatagta |
37280117 |
T |
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| Q |
130 |
tgataaaaatttgaagtaatttgttacttgtcataaacttattatggtcaatacaatatacaataatttcttttacccttttaaatccagaaattacagt |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37280116 |
tgataaaaatttgaagtaatttgttacttgtcataaacttattatggtcaatacaatatacaataatttcttttacccttttaaatccagaaattacagt |
37280017 |
T |
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| Q |
230 |
aatttcttttacttgtcataagcttgaaatttgtagatgcaggttctgatctgcagctctgacccggtgatatt |
303 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
37280016 |
aatttcttttacttgtcataagcttgaaatttgtagatgcaggttctgatctgcagctctgaccaggtgatatt |
37279943 |
T |
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