View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13898_low_22 (Length: 242)

Name: NF13898_low_22
Description: NF13898
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13898_low_22
NF13898_low_22
[»] chr1 (65 HSPs)
chr1 (120-226)||(39867752-39867858)
chr1 (1-123)||(46641807-46641927)
chr1 (1-118)||(47544587-47544702)
chr1 (1-120)||(24003418-24003535)
chr1 (1-120)||(31821570-31821687)
chr1 (1-123)||(2249583-2249703)
chr1 (1-119)||(12105160-12105276)
chr1 (1-116)||(52861300-52861413)
chr1 (1-119)||(8396639-8396755)
chr1 (1-119)||(24230569-24230685)
chr1 (1-120)||(13202935-13203052)
chr1 (20-122)||(31530304-31530406)
chr1 (1-119)||(45622480-45622596)
chr1 (20-120)||(30320889-30320989)
chr1 (27-119)||(46235146-46235238)
chr1 (1-116)||(31084897-31085010)
chr1 (1-116)||(38718022-38718135)
chr1 (1-117)||(52180523-52180637)
chr1 (1-120)||(46362022-46362139)
chr1 (20-121)||(51787462-51787563)
chr1 (1-113)||(6966199-6966309)
chr1 (1-115)||(47693492-47693601)
chr1 (1-123)||(31075604-31075724)
chr1 (1-119)||(35873936-35874052)
chr1 (20-117)||(34038163-34038260)
chr1 (2-120)||(14152686-14152803)
chr1 (20-119)||(38261111-38261209)
chr1 (24-119)||(44263968-44264063)
chr1 (20-119)||(52345599-52345698)
chr1 (20-110)||(7227579-7227669)
chr1 (24-113)||(477448-477537)
chr1 (20-119)||(10348027-10348123)
chr1 (39-120)||(25702434-25702515)
chr1 (22-119)||(48976875-48976972)
chr1 (1-71)||(12907549-12907617)
chr1 (20-116)||(42275338-42275434)
chr1 (20-119)||(9587951-9588050)
chr1 (20-123)||(17553812-17553915)
chr1 (20-119)||(28624785-28624884)
chr1 (1-90)||(30571299-30571386)
chr1 (1-119)||(6526428-6526544)
chr1 (39-119)||(21883138-21883218)
chr1 (1-117)||(24381610-24381724)
chr1 (1-92)||(6329275-6329364)
chr1 (29-116)||(51056512-51056599)
chr1 (1-66)||(21073055-21073118)
chr1 (76-121)||(10408658-10408703)
chr1 (47-120)||(12178933-12179006)
chr1 (20-79)||(30263622-30263681)
chr1 (1-80)||(52441116-52441193)
chr1 (75-116)||(48760426-48760467)
chr1 (55-119)||(24511921-24511985)
chr1 (41-120)||(32912210-32912290)
chr1 (20-119)||(33986181-33986278)
chr1 (36-119)||(5956526-5956609)
chr1 (41-119)||(12838097-12838176)
chr1 (41-124)||(43146750-43146832)
chr1 (40-119)||(50239277-50239356)
chr1 (55-122)||(51610533-51610600)
chr1 (55-117)||(30547952-30548014)
chr1 (75-119)||(40054949-40054994)
chr1 (75-119)||(43916346-43916391)
chr1 (65-117)||(6468793-6468845)
chr1 (85-117)||(30572673-30572705)
chr1 (74-125)||(47458888-47458940)
[»] chr2 (40 HSPs)
chr2 (1-129)||(32602293-32602419)
chr2 (20-119)||(25331455-25331554)
chr2 (1-119)||(7673295-7673411)
chr2 (1-119)||(9589404-9589520)
chr2 (1-123)||(17451278-17451398)
chr2 (1-119)||(32401079-32401195)
chr2 (20-120)||(43439994-43440094)
chr2 (1-120)||(9122155-9122272)
chr2 (1-119)||(1580247-1580363)
chr2 (1-119)||(4740515-4740631)
chr2 (1-119)||(21404198-21404314)
chr2 (1-119)||(4297897-4298013)
chr2 (20-118)||(33493779-33493877)
chr2 (20-117)||(6945649-6945746)
chr2 (3-117)||(45157806-45157918)
chr2 (1-129)||(35895301-35895427)
chr2 (1-117)||(40946764-40946878)
chr2 (1-119)||(27401020-27401136)
chr2 (1-121)||(30981175-30981294)
chr2 (20-106)||(18998728-18998814)
chr2 (1-97)||(44143228-44143321)
chr2 (1-116)||(14840088-14840199)
chr2 (20-113)||(4048984-4049076)
chr2 (41-121)||(38073104-38073185)
chr2 (41-119)||(37781866-37781945)
chr2 (1-124)||(40495737-40495858)
chr2 (1-119)||(3261196-3261312)
chr2 (41-119)||(12182886-12182965)
chr2 (41-125)||(11088553-11088638)
chr2 (84-116)||(36754339-36754371)
chr2 (54-120)||(5615724-5615791)
chr2 (1-63)||(39620484-39620544)
chr2 (74-120)||(45690498-45690545)
chr2 (73-129)||(2859349-2859406)
chr2 (75-119)||(8333891-8333936)
chr2 (47-121)||(33494268-33494344)
chr2 (54-119)||(38617728-38617793)
chr2 (75-119)||(41555431-41555476)
chr2 (58-118)||(17821867-17821927)
chr2 (20-119)||(21995691-21995790)
[»] scaffold1319 (1 HSPs)
scaffold1319 (1-121)||(41-159)
[»] chr7 (45 HSPs)
chr7 (1-119)||(29606268-29606384)
chr7 (1-117)||(15716196-15716310)
chr7 (1-117)||(24952928-24953042)
chr7 (20-119)||(26605056-26605155)
chr7 (1-119)||(46575101-46575219)
chr7 (1-119)||(11750419-11750535)
chr7 (20-118)||(35291327-35291425)
chr7 (20-121)||(7574549-7574650)
chr7 (1-116)||(30076931-30077044)
chr7 (1-123)||(23110426-23110546)
chr7 (1-119)||(37504559-37504675)
chr7 (1-119)||(38665457-38665573)
chr7 (1-119)||(47642789-47642905)
chr7 (39-124)||(15954587-15954672)
chr7 (20-121)||(28264748-28264849)
chr7 (1-119)||(1269008-1269124)
chr7 (24-126)||(6791437-6791539)
chr7 (24-116)||(41968435-41968527)
chr7 (1-119)||(3214811-3214932)
chr7 (20-119)||(32529180-32529279)
chr7 (1-118)||(23406653-23406768)
chr7 (1-121)||(38666160-38666278)
chr7 (20-119)||(35358010-35358109)
chr7 (1-124)||(18520209-18520326)
chr7 (1-79)||(3602558-3602634)
chr7 (37-119)||(30891581-30891663)
chr7 (1-119)||(24812372-24812484)
chr7 (1-117)||(17306603-17306717)
chr7 (36-119)||(41046838-41046921)
chr7 (1-114)||(45232053-45232163)
chr7 (39-119)||(22967409-22967489)
chr7 (1-120)||(5582860-5582977)
chr7 (42-117)||(39558905-39558980)
chr7 (54-120)||(2291121-2291187)
chr7 (41-119)||(34363614-34363693)
chr7 (83-118)||(36533327-36533362)
chr7 (73-119)||(38882818-38882865)
chr7 (75-120)||(5215386-5215432)
chr7 (20-113)||(26413634-26413724)
chr7 (73-119)||(34118830-34118876)
chr7 (75-119)||(21919688-21919733)
chr7 (75-119)||(23182390-23182435)
chr7 (54-119)||(30936094-30936159)
chr7 (41-116)||(41769289-41769365)
chr7 (40-120)||(44963822-44963902)
[»] chr3 (75 HSPs)
chr3 (1-129)||(35501080-35501206)
chr3 (1-122)||(53289227-53289346)
chr3 (1-117)||(47746119-47746233)
chr3 (1-131)||(26850216-26850343)
chr3 (1-119)||(26884973-26885089)
chr3 (1-122)||(7352163-7352282)
chr3 (1-118)||(54428785-54428900)
chr3 (1-124)||(29388690-29388811)
chr3 (20-119)||(30349311-30349410)
chr3 (20-119)||(37520702-37520801)
chr3 (1-119)||(1129129-1129245)
chr3 (1-119)||(35137729-35137846)
chr3 (1-119)||(39987351-39987467)
chr3 (24-121)||(44653482-44653579)
chr3 (24-116)||(23456769-23456861)
chr3 (19-119)||(40478064-40478164)
chr3 (1-120)||(42621847-42621964)
chr3 (1-118)||(15997111-15997226)
chr3 (20-117)||(46507363-46507459)
chr3 (20-112)||(9507210-9507302)
chr3 (20-112)||(9515185-9515277)
chr3 (1-113)||(26012203-26012313)
chr3 (1-105)||(34825558-34825660)
chr3 (1-117)||(41217345-41217459)
chr3 (1-121)||(44379412-44379530)
chr3 (1-116)||(7862735-7862848)
chr3 (20-119)||(42478992-42479091)
chr3 (20-113)||(50258108-50258201)
chr3 (1-117)||(41982275-41982389)
chr3 (1-119)||(1021266-1021380)
chr3 (1-120)||(25482250-25482367)
chr3 (1-119)||(36220696-36220812)
chr3 (1-130)||(26456943-26457069)
chr3 (20-120)||(4817075-4817174)
chr3 (1-116)||(37127807-37127919)
chr3 (1-119)||(51344663-51344778)
chr3 (1-93)||(48825425-48825515)
chr3 (20-119)||(44522298-44522397)
chr3 (20-100)||(13756324-13756405)
chr3 (27-119)||(50412071-50412162)
chr3 (1-124)||(43745341-43745462)
chr3 (20-90)||(14653811-14653881)
chr3 (42-116)||(27045023-27045097)
chr3 (1-118)||(40474126-40474240)
chr3 (27-119)||(25834544-25834636)
chr3 (27-110)||(35389300-35389383)
chr3 (1-119)||(32636917-32637033)
chr3 (24-110)||(54788626-54788712)
chr3 (54-124)||(29806350-29806420)
chr3 (1-119)||(40021370-40021486)
chr3 (1-90)||(39252919-39253006)
chr3 (19-88)||(45538676-45538745)
chr3 (1-113)||(24170222-24170331)
chr3 (1-116)||(51756096-51756209)
chr3 (1-79)||(10279045-10279121)
chr3 (54-119)||(48795439-48795505)
chr3 (40-117)||(52082045-52082122)
chr3 (47-119)||(9252187-9252259)
chr3 (24-64)||(33006610-33006650)
chr3 (54-121)||(35375509-35375577)
chr3 (73-119)||(5529054-5529100)
chr3 (74-128)||(11140606-11140660)
chr3 (75-120)||(32121898-32121944)
chr3 (20-66)||(39678414-39678460)
chr3 (56-122)||(40784491-40784557)
chr3 (58-119)||(8966276-8966337)
chr3 (75-120)||(19547851-19547896)
chr3 (21-66)||(29491932-29491977)
chr3 (75-119)||(29698322-29698367)
chr3 (1-66)||(40784578-40784641)
chr3 (1-66)||(41282583-41282646)
chr3 (41-116)||(13867063-13867139)
chr3 (74-125)||(14998141-14998193)
chr3 (54-121)||(29815469-29815537)
chr3 (24-116)||(36099476-36099568)
[»] chr5 (41 HSPs)
chr5 (1-120)||(42597473-42597589)
chr5 (1-119)||(2851988-2852104)
chr5 (1-117)||(9604433-9604547)
chr5 (20-123)||(13127288-13127391)
chr5 (1-116)||(40803611-40803724)
chr5 (1-120)||(14434817-14434934)
chr5 (20-107)||(35370410-35370497)
chr5 (1-118)||(28318348-28318463)
chr5 (20-116)||(9910042-9910138)
chr5 (1-119)||(6260308-6260424)
chr5 (1-119)||(33678448-33678564)
chr5 (27-116)||(33210684-33210773)
chr5 (1-106)||(3426080-3426183)
chr5 (20-119)||(29960174-29960273)
chr5 (1-106)||(5360016-5360119)
chr5 (1-117)||(479676-479790)
chr5 (20-108)||(30753458-30753546)
chr5 (19-119)||(42486605-42486705)
chr5 (40-118)||(39816506-39816584)
chr5 (1-110)||(9913198-9913304)
chr5 (55-118)||(702292-702355)
chr5 (1-116)||(13119090-13119202)
chr5 (1-116)||(34259830-34259943)
chr5 (20-119)||(36427905-36428004)
chr5 (38-116)||(9630387-9630465)
chr5 (1-119)||(12334598-12334710)
chr5 (41-118)||(40563116-40563193)
chr5 (1-71)||(8258685-8258753)
chr5 (20-71)||(3024199-3024250)
chr5 (37-119)||(16496092-16496174)
chr5 (1-125)||(4616989-4617111)
chr5 (1-120)||(27980065-27980181)
chr5 (41-124)||(31588562-31588646)
chr5 (54-119)||(4039469-4039535)
chr5 (75-121)||(5512680-5512727)
chr5 (77-120)||(30753420-30753463)
chr5 (1-66)||(702209-702272)
chr5 (75-119)||(4429781-4429826)
chr5 (36-121)||(34302971-34303056)
chr5 (75-119)||(39939033-39939078)
chr5 (76-119)||(40524084-40524128)
[»] chr4 (55 HSPs)
chr4 (1-119)||(27990536-27990652)
chr4 (1-120)||(1857094-1857211)
chr4 (1-119)||(28835788-28835904)
chr4 (1-119)||(126868-126984)
chr4 (1-119)||(26118043-26118159)
chr4 (1-110)||(24535491-24535598)
chr4 (20-120)||(45692621-45692721)
chr4 (1-120)||(4720761-4720878)
chr4 (20-119)||(34829030-34829129)
chr4 (20-121)||(42177340-42177441)
chr4 (1-116)||(8256732-8256845)
chr4 (1-116)||(8270150-8270263)
chr4 (3-118)||(29364474-29364587)
chr4 (1-119)||(27761400-27761516)
chr4 (20-118)||(53936508-53936606)
chr4 (1-117)||(24979944-24980057)
chr4 (22-119)||(30348163-30348260)
chr4 (3-119)||(38008446-38008560)
chr4 (1-116)||(52607571-52607684)
chr4 (1-118)||(5970700-5970815)
chr4 (20-125)||(36631030-36631134)
chr4 (20-117)||(50607992-50608089)
chr4 (20-116)||(50733165-50733261)
chr4 (20-119)||(3763420-3763519)
chr4 (1-126)||(56303128-56303251)
chr4 (20-120)||(29582273-29582373)
chr4 (20-116)||(31999033-31999128)
chr4 (1-87)||(583060-583144)
chr4 (1-113)||(43735423-43735534)
chr4 (1-122)||(50776062-50776181)
chr4 (41-123)||(32570695-32570778)
chr4 (1-121)||(33491160-33491277)
chr4 (1-120)||(23058764-23058881)
chr4 (20-121)||(9356379-9356480)
chr4 (1-119)||(352474-352589)
chr4 (20-107)||(48647031-48647118)
chr4 (24-118)||(54996414-54996508)
chr4 (41-119)||(21424469-21424548)
chr4 (1-71)||(32845703-32845771)
chr4 (1-118)||(43147780-43147902)
chr4 (54-120)||(46663667-46663733)
chr4 (73-121)||(24566365-24566414)
chr4 (74-123)||(28038046-28038095)
chr4 (20-121)||(32288901-32289002)
chr4 (47-107)||(5340303-5340363)
chr4 (1-92)||(50383356-50383445)
chr4 (55-119)||(50498144-50498208)
chr4 (74-119)||(27950258-27950304)
chr4 (41-118)||(45063238-45063316)
chr4 (55-116)||(408405-408466)
chr4 (55-127)||(1605582-1605655)
chr4 (75-119)||(19527085-19527130)
chr4 (20-57)||(50498389-50498426)
chr4 (55-119)||(30060530-30060594)
chr4 (41-105)||(56104416-56104480)
[»] chr6 (27 HSPs)
chr6 (1-120)||(33574232-33574349)
chr6 (1-119)||(33574643-33574759)
chr6 (1-119)||(33574821-33574937)
chr6 (2-119)||(23416788-23416903)
chr6 (20-107)||(1245127-1245214)
chr6 (20-124)||(242880-242984)
chr6 (20-117)||(9687083-9687180)
chr6 (19-119)||(4509736-4509835)
chr6 (1-120)||(3141039-3141156)
chr6 (24-119)||(8549563-8549658)
chr6 (23-118)||(11763174-11763269)
chr6 (27-119)||(9662072-9662164)
chr6 (20-119)||(14779211-14779309)
chr6 (20-119)||(4576692-4576791)
chr6 (36-119)||(18772183-18772266)
chr6 (20-101)||(22755549-22755630)
chr6 (20-96)||(528828-528904)
chr6 (55-119)||(23069042-23069106)
chr6 (1-119)||(26958681-26958790)
chr6 (68-120)||(19474026-19474079)
chr6 (47-119)||(21970641-21970713)
chr6 (55-119)||(29023619-29023683)
chr6 (75-129)||(1705967-1706022)
chr6 (68-119)||(8858024-8858075)
chr6 (41-121)||(10887807-10887888)
chr6 (75-119)||(10965985-10966030)
chr6 (55-119)||(31644410-31644474)
[»] chr8 (39 HSPs)
chr8 (1-117)||(118100-118214)
chr8 (20-124)||(7128085-7128189)
chr8 (1-113)||(37675943-37676053)
chr8 (1-119)||(40578986-40579102)
chr8 (1-119)||(41720539-41720655)
chr8 (1-118)||(6982786-6982901)
chr8 (1-105)||(26521980-26522082)
chr8 (20-119)||(10706555-10706654)
chr8 (1-120)||(29454142-29454259)
chr8 (20-119)||(38210627-38210726)
chr8 (20-119)||(44000561-44000660)
chr8 (1-119)||(2261304-2261420)
chr8 (20-118)||(26988388-26988486)
chr8 (20-117)||(9497846-9497943)
chr8 (20-119)||(40267790-40267888)
chr8 (1-119)||(1043350-1043466)
chr8 (1-119)||(15451421-15451537)
chr8 (20-121)||(29265587-29265688)
chr8 (1-121)||(5328891-5329009)
chr8 (1-117)||(39646639-39646753)
chr8 (38-121)||(2749313-2749396)
chr8 (20-119)||(27847776-27847875)
chr8 (24-119)||(34634165-34634259)
chr8 (37-116)||(43841846-43841925)
chr8 (1-121)||(6630907-6631025)
chr8 (1-121)||(36667526-36667644)
chr8 (20-116)||(39300086-39300182)
chr8 (1-119)||(40776637-40776753)
chr8 (1-118)||(38329452-38329567)
chr8 (20-118)||(34165910-34166009)
chr8 (47-119)||(31158888-31158960)
chr8 (40-119)||(17642400-17642479)
chr8 (41-119)||(40547690-40547769)
chr8 (1-88)||(45452417-45452501)
chr8 (47-117)||(36274566-36274636)
chr8 (55-121)||(36672008-36672074)
chr8 (42-119)||(42194659-42194737)
chr8 (76-116)||(15231350-15231390)
chr8 (20-88)||(36162500-36162568)
[»] scaffold0308 (1 HSPs)
scaffold0308 (20-118)||(7511-7609)
[»] scaffold0667 (1 HSPs)
scaffold0667 (1-120)||(123-240)
[»] scaffold0923 (1 HSPs)
scaffold0923 (29-122)||(1-94)
[»] scaffold0432 (1 HSPs)
scaffold0432 (1-119)||(3032-3144)
[»] scaffold0271 (1 HSPs)
scaffold0271 (40-120)||(16987-17068)


Alignment Details
Target: chr1 (Bit Score: 99; Significance: 5e-49; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 120 - 226
Target Start/End: Original strand, 39867752 - 39867858
Alignment:
Q  120 atttaattatgaacattaatcggtcaattacccaatatttgaaagaaagaaaaaattaaagaggatcttgagaatagaatcttaacgtcgatatgtaaac 219  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  39867752 atttaattatgaacattaatcggtcaatcacccaatatttgaaagaaagaaaaaattaaagaggatcttgataatagaatcttaacgtcgatatgtaaac 39867851  T
Q  220 atgttct 226  Q
    |||||||    
T  39867852 atgttct 39867858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 46641807 - 46641927
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||| ||||||||||||||| ||    
T  46641807 aaaatataaatatt-gacaaa-tagctatttactacataaaaaatgatcgttcatttataaaattaagaagcaggagtaccggtacacctcattttgcga 46641904  T
Q  101 gtgtaccgtagaagttcccattt 123  Q
    |||||||||||||||||||||||    
T  46641905 gtgtaccgtagaagttcccattt 46641927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 47544587 - 47544702
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  47544587 aaaatataaatatt-gacaaa-tagctatttactacataaaaaatgatcgttcatttataaaattaagaagcaggagtaccggtacacctcattttgtga 47544684  T
Q  101 gtgtaccgtagaagttcc 118  Q
    ||||||| ||||||||||    
T  47544685 gtgtaccatagaagttcc 47544702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 24003535 - 24003418
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||| | |||||||||||||| |    
T  24003535 aaaatataaatatt-gacaaa-tagctatttactacataaaaaattatcattcatttataaaattaagaagcaggagtaccggaacacctcattttgtta 24003438  T
Q  101 gtgtaccgtagaagttccca 120  Q
    ||||||||||||||||||||    
T  24003437 gtgtaccgtagaagttccca 24003418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 31821687 - 31821570
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||||||| |||||||||||| ||||||||||||||||||||||||| | |||||||  |||||||||||||||||    
T  31821687 aaaatataaatatt-gacaaa-tagctatttaatacataaaaaatgatcgttcatttataaaattaagaagcaggagtaccgctacacctcattttgtga 31821590  T
Q  101 gtgtaccgtagaagttccca 120  Q
    ||||||||||||||||||||    
T  31821589 gtgtaccgtagaagttccca 31821570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 2249703 - 2249583
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||  | |||||||  |||||||||||||||||    
T  2249703 aaaatataaatatt-gacaaa-tagctatttactacataaaaaatgatcgttcatttataaaattaagaaacaggagtaccgatacacctcattttgtga 2249606  T
Q  101 gtgtaccgtagaagttcccattt 123  Q
    |||||||| ||||||||||||||    
T  2249605 gtgtaccgcagaagttcccattt 2249583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 12105276 - 12105160
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| || ||||||| ||||||||||||||||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  12105276 aaaatataaatatt-gacaaa-taactatttattacataaaaaattatcgttaatttataaaattatgaagcaagagtaccggtacacctcattttgtga 12105179  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||    
T  12105178 gtgtaccgtagaagttccc 12105160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 52861413 - 52861300
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |  |||||| ||||||||||||||||||    
T  52861413 aaaatataaatatt-gacaaa-tagctatttactacataaaaaatgatcgttcatttataaaattaagaagcagaagtaccggtacacctcattttgtga 52861316  T
Q  101 gtgtaccgtagaagtt 116  Q
    |||||||||| |||||    
T  52861315 gtgtaccgtaaaagtt 52861300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 8396639 - 8396755
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||  ||||||||||||| |||    
T  8396639 aaaatataaatatt-gacaaa-tagctatttactacataaaaaatgatcgttcatttataaaattaagaagcaggagtaccgatacacctcattttatga 8396736  T
Q  101 gtgtaccgtagaagttccc 119  Q
    ||||||||||||| |||||    
T  8396737 gtgtaccgtagaaattccc 8396755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 24230685 - 24230569
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    ||||||||||| ||||||||| |||||||||| ||||||||||||||||||| ||||||||||||| |||| | |||||||| ||||||||| |||||||    
T  24230685 aaaatataaat-tttgacaaa-tagctatttattacataaaaaattatcgttaatttataaaattatgaagcaggagtaccattacacctcactttgtga 24230588  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||    
T  24230587 gtgtaccgtagaagttccc 24230569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 13203052 - 13202935
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| || |||||||||||||||||||| ||||||||||||||||||||||||  | ||||||| |||||||||||||| |||    
T  13203052 aaaatataaatatt-gacaaa-taactatttactacataaaaaatgatcgttcatttataaaattaagaaacaggagtaccggtacacctcattttctga 13202955  T
Q  101 gtgtaccgtagaagttccca 120  Q
    |||||| |||||||||||||    
T  13202954 gtgtacagtagaagttccca 13202935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 31530406 - 31530304
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| |||||| ||||||||||||||||||| ||||||||||||| |||| | |||||||||||||||||||||||| ||||||| ||||||||||||    
T  31530406 aaatagttatttattacataaaaaattatcgttaatttataaaattatgaagcaggagtaccagtacacctcattttgtaagtgtacggtagaagttccc 31530307  T
Q  120 att 122  Q
    |||    
T  31530306 att 31530304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 45622596 - 45622480
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| ||||||||| ||||||||| ||||||||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  45622596 aaaatataaatatt-gacaaa-taggtatttactatataaaaaatgatcgttcatttataaaattaagaagtaggagtaccggtacacctcattttgtga 45622499  T
Q  101 gtgtaccgtagaagttccc 119  Q
    ||||| |||| ||||||||    
T  45622498 gtgtaacgtataagttccc 45622480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 30320989 - 30320889
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||| | |||||||| |||||  |||||||||||||||||||||    
T  30320989 aaatagctatttattacataaaaaattatcgttcatttataaaattaagaagcaggagtatcggtacaccttattttacgagtgtaccgtagaagttccc 30320890  T
Q  120 a 120  Q
    |    
T  30320889 a 30320889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 46235146 - 46235238
Alignment:
Q  27 tatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| | ||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  46235146 tatttatttcataaaaaattatcgttaatttataaaattatgaagaaagggtaccagtacacctcattttgtaagtgtaccgtagaagttccc 46235238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 31084897 - 31085010
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| |||||| |||||||||||||||| | |||||||||  ||||| |||| ||||||    
T  31084897 aaaatataaatatt-gacaaa-tagctatttactacataaaaaataatcgttaatttataaaattaagatgtaagagtaccgatacacttcatcttgtga 31084994  T
Q  101 gtgtaccgtagaagtt 116  Q
    ||||||||||||||||    
T  31084995 gtgtaccgtagaagtt 31085010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 38718022 - 38718135
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||| ||| ||||||||||||||||| ||| | |||||||  |||||||||||||||||    
T  38718022 aaaatataaatatt-gacaaa-tagttatttactacataaaaaatgatcattcatttataaaattaataaggaggagtaccgatacacctcattttgtga 38718119  T
Q  101 gtgtaccgtagaagtt 116  Q
    ||||||||||||||||    
T  38718120 gtgtaccgtagaagtt 38718135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 52180523 - 52180637
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    ||||||||||| ||||||||| |||||||||| ||||||||||||||||||| ||||||||||||| |||| | ||||||| |||||||||| |||||||    
T  52180523 aaaatataaat-tttgacaaa-tagctatttattacataaaaaattatcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtga 52180620  T
Q  101 gtgtaccgtagaagttc 117  Q
    || |||| |||||||||    
T  52180621 gtataccatagaagttc 52180637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 46362139 - 46362022
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| |||||| | |||||||||| |||||| ||||||||||||| ||| |||| ||||| ||||||||||||||||||    
T  46362139 aaaatataaatatt-gacaaa-tagttatttatttcataaaaaatgatcgttaatttataaaattacgaaaaaagggtaccggtacacctcattttgtga 46362042  T
Q  101 gtgtaccgtagaagttccca 120  Q
     |||||||||||||||||||    
T  46362041 atgtaccgtagaagttccca 46362022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 51787563 - 51787462
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| ||||||||||||||||||| ||| || |||||||||||||||| | |||||||||  |||||||||| || ||||||||||||||||||||||    
T  51787563 aaatagttatttactacataaaaaatgatcattaatttataaaattaagatgcaagagtaccgatacacctcatcttatgagtgtaccgtagaagttccc 51787464  T
Q  120 at 121  Q
    ||    
T  51787463 at 51787462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 6966199 - 6966309
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| |||||| |||||||||| | ||| ||||||||||||||||||||  | ||||||| ||||||||||||||||||    
T  6966199 aaaatataaatatt-gacaaa-tagttatttattacataaaaattgatcattcatttataaaattaagaatgaggagtaccggtacacctcattttgtga 6966296  T
Q  101 gtgtaccgtagaa 113  Q
    |||||||||||||    
T  6966297 gtgtaccgtagaa 6966309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 47693492 - 47693601
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||||||| ||||   |||||||||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  47693492 aaaatataaatatt-gacaaa-tagctatttattaca---aaaattatcgttaatttataaaattatgaagcaagagtaccggtacacctcattttgtga 47693586  T
Q  101 gtgtaccgtagaagt 115  Q
    ||||||| |||||||    
T  47693587 gtgtaccatagaagt 47693601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 31075724 - 31075604
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| |||||| |||||||||||||||| | ||||||||| || ||| |||| |||| |    
T  31075724 aaaatataaatatt-gacaaa-tagctatttactacataaaaaataatcgttaatttataaaattaagatgtaagagtaccggtgcacttcatcttgtaa 31075627  T
Q  101 gtgtaccgtagaagttcccattt 123  Q
     |||||||||||| || ||||||    
T  31075626 atgtaccgtagaaatttccattt 31075604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 35874052 - 35873936
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    ||||||||||| ||||||||| ||| |||||| |||||||||||| |||||| ||||||||||||| |||| |  |||||| ||||| |||| |||||||    
T  35874052 aaaatataaat-tttgacaaa-tagttatttattacataaaaaatgatcgttaatttataaaattatgaagcagaagtaccggtacatctcactttgtga 35873955  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||    
T  35873954 gtgtaccgtagaagttccc 35873936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 34038260 - 34038163
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttc 117  Q
    ||||| ||||||| | |||||||||| |||||| ||||||||||||| |||| | ||||||| |||||||||| ||||||||||||||||||||||||    
T  34038260 aaataactatttatttcataaaaaatgatcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtgagtgtaccgtagaagttc 34038163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 120
Target Start/End: Complemental strand, 14152803 - 14152686
Alignment:
Q  2 aaatataaatatttgacaaaatagctatttactacataaaaaa-ttatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    ||||||||||||| |||||| |||||||||| ||||||||||| |||| ||| |||||||||||||  ||| ||||||||| ||| |||| |||||||||    
T  14152803 aaatataaatatt-gacaaa-tagctatttattacataaaaaaattattgttaatttataaaattattaagcaagagtaccggtataccttattttgtga 14152706  T
Q  101 gtgtaccgtagaagttccca 120  Q
    || |||||||||||||||||    
T  14152705 gtataccgtagaagttccca 14152686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 38261111 - 38261209
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||||||||||| |||||||||||| |||||| ||| ||||||||| |||| | ||||||| |||||||||| ||| ||||||||||||||||||||||    
T  38261111 aaatagctatttattacataaaaaatgatcgttaatt-ataaaattatgaagcaggagtaccggtacacctcactttatgagtgtaccgtagaagttccc 38261209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 119
Target Start/End: Original strand, 44263968 - 44264063
Alignment:
Q  24 agctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||||||| |||||||||||| |||||| ||||||||||||| |||  | ||||||| |||||||||| ||||||||||||||||||| ||||||    
T  44263968 agctatttattacataaaaaatgatcgttaatttataaaattatgaaacaggagtaccggtacacctcactttgtgagtgtaccgtagatgttccc 44264063  T

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Target: chr1; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 52345698 - 52345599
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| |||||| | || ||||||| |||||| ||||||||||||| |||  ||||||||| |||||||||| ||||||||||||||||||||||||||    
T  52345698 aaatagttatttatttcacaaaaaatgatcgttaatttataaaattatgaaacaagagtaccggtacacctcactttgtgagtgtaccgtagaagttccc 52345599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 110
Target Start/End: Complemental strand, 7227669 - 7227579
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgta 110  Q
    |||||| |||||| | |||||||||| |||||| ||||||||||||| |||||||||||| |  |||||||||||||||||||||||||||    
T  7227669 aaatagttatttatttcataaaaaatgatcgttaatttataaaattatgaagaaagagtatcgatacacctcattttgtgagtgtaccgta 7227579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 113
Target Start/End: Complemental strand, 477537 - 477448
Alignment:
Q  24 agctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaa 113  Q
    ||||||||| | |||||||||| |||||| ||||||||||||| ||| ||||||||||  || |||||||||||||||||||||||||||    
T  477537 agctatttatttcataaaaaatgatcgttaatttataaaattatgaaaaaagagtaccgatagacctcattttgtgagtgtaccgtagaa 477448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 10348123 - 10348027
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||||||||||||| ||||||||| ||||   |||||||||||||||||| | ||||| | |||||| | ||||||||||||||||||||||||||||    
T  10348123 aaatagctatttactatataaaaaatgatcg---atttataaaattaagaagcaggagtatcggtacactttattttgtgagtgtaccgtagaagttccc 10348027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 25702515 - 25702434
Alignment:
Q  39 aaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccca 120  Q
    ||||||| |||||| ||||||||||||| |||| ||||||||| |||||||||| ||| |||||||||||||||||||||||    
T  25702515 aaaaaatgatcgttgatttataaaattatgaagcaagagtaccggtacacctcaatttatgagtgtaccgtagaagttccca 25702434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 48976972 - 48976875
Alignment:
Q  22 atagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||| |||||| |||||||||||| |||||| ||||||||||||| |||| | |||||||  ||||||||| ||||||||||| ||||||||||||||    
T  48976972 atagttatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtaccgatacacctcactttgtgagtgtgccgtagaagttccc 48976875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 12907549 - 12907617
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaag 71  Q
    |||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  12907549 aaaatataaatatt-gacaaa-tagctatttattacataaaaaattatcgttcatttataaaattaagaag 12907617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 42275434 - 42275338
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagtt 116  Q
    ||||| ||||||| | |||||||||| |||||| ||||||||||||| |||| | ||||||| |||||||||| ||| |||||||||| ||||||||    
T  42275434 aaataactatttatttcataaaaaatgatcgttaatttataaaattatgaagcatgagtaccggtacacctcactttctgagtgtaccttagaagtt 42275338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 9587951 - 9588050
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||||||||||| | ||||||| || ||| || ||||||||||||| |||| | ||||||| ||| |||||| ||| ||||||||||||||||||||||    
T  9587951 aaatagctatttatttcataaaagataatcattaatttataaaattatgaagcaggagtaccggtatacctcactttatgagtgtaccgtagaagttccc 9588050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 17553915 - 17553812
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| |||||| | |||||||||| |||||| ||||||||||||| ||||||| | |||  ||||| |||||||||||||||||| ||| |||||| |    
T  17553915 aaatagttatttatttcataaaaaatgatcgttaatttataaaattatgaagaaaaaatacaggtacatctcattttgtgagtgtacggtataagttctc 17553816  T
Q  120 attt 123  Q
    ||||    
T  17553815 attt 17553812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 28624785 - 28624884
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||||||||||| |||| ||||||  ||| || |||||||||||||  ||| ||||||||  |||||||||| ||||| ||||||||||||||||||||    
T  28624785 aaatagctatttattacacaaaaaagaatcttttatttataaaattataaaggaagagtacgggtacacctcactttgtaagtgtaccgtagaagttccc 28624884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 30571299 - 30571386
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacct 90  Q
    |||||||||||||| |||||| |||||||||| |||||||||||||||| |  ||||||||||||| |||| ||||||||| ||||||||    
T  30571299 aaaatataaatatt-gacaaa-tagctatttattacataaaaaattatcatcaatttataaaattatgaagcaagagtaccggtacacct 30571386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 6526544 - 6526428
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| || ||||||| |||||  |||||||||||| |||||| |||| | |||||| |||   |||||| | |||||||||| |||||||    
T  6526544 aaaatataaatatt-ga-aaaatagttatttcttacataaaaaatgatcgttaatttgtgaaattatgaaacgagagtatcggtacacctcactttgtga 6526447  T
Q  101 gtgtaccgtagaagttccc 119  Q
    ||||||||||||| |||||    
T  6526446 gtgtaccgtagaaattccc 6526428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 119
Target Start/End: Original strand, 21883138 - 21883218
Alignment:
Q  39 aaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||||| |||||| ||||||||||||| |||| ||||||||| |||||||||| ||| | ||||||||||| | ||||||    
T  21883138 aaaaaataatcgttaatttataaaattatgaagtaagagtaccggtacacctcaatttataagtgtaccgtaaatgttccc 21883218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 24381610 - 24381724
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| || ||||| |||||||  ||| | |||||| |||||| ||||||||||||| |||   |||||||| |||||| ||  |||||||    
T  24381610 aaaatataaatatt-ga-aaaattgctatttcttacttgaaaaatgatcgttaatttataaaattatgaaacgagagtaccggtacacttcgctttgtga 24381707  T
Q  101 gtgtaccgtagaagttc 117  Q
    |||||||||||||||||    
T  24381708 gtgtaccgtagaagttc 24381724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 6329364 - 6329275
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctca 92  Q
    |||||||||||||| |||||| |||||||||| |||||||||||| |||||| ||||||||||||| | || ||||| ||| ||||| ||||    
T  6329364 aaaatataaatatt-gacaaa-tagctatttattacataaaaaatgatcgttaatttataaaattatggagtaagagcaccggtacaactca 6329275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 116
Target Start/End: Original strand, 51056512 - 51056599
Alignment:
Q  29 tttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagtt 116  Q
    |||| |||||||||||| |||||| ||||||  ||||| |||| | ||||||| ||||| |||| ||||||| |||||||||||||||    
T  51056512 tttattacataaaaaatgatcgttaatttatttaattatgaagcaggagtaccggtacatctcactttgtgattgtaccgtagaagtt 51056599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 21073055 - 21073118
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaatta 66  Q
    ||||||||||||||  | |||||||||||||| |||||||||||| |||||| |||||||||||||    
T  21073055 aaaatataaatatt--aaaaaatagctatttattacataaaaaatgatcgttaatttataaaatta 21073118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 10408658 - 10408703
Alignment:
Q  76 agtaccagtacacctcattttgtgagtgtaccgtagaagttcccat 121  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||    
T  10408658 agtaccggtacacctcactttgtgagtgtaccgtagaagttcccat 10408703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 12178933 - 12179006
Alignment:
Q  47 atcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccca 120  Q
    |||||| ||||||| | ||| |||| ||||||||| |||||||||| |||| |||||||||||| |||||||||    
T  12178933 atcgttaatttatagatttaggaagcaagagtaccggtacacctcaatttgcgagtgtaccgtaaaagttccca 12179006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 79
Target Start/End: Complemental strand, 30263681 - 30263622
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagta 79  Q
    |||||| ||||||||||||||||||| ||| || |||||||||||||||| | |||||||    
T  30263681 aaatagttatttactacataaaaaatgatcattaatttataaaattaagatgcaagagta 30263622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 52441193 - 52441116
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtac 80  Q
    |||||||||||||| |||||| || ||||||| |||||||||||| |||||| ||||||||||||| |||| || |||||    
T  52441193 aaaatataaatatt-gacaaa-taactatttattacataaaaaatgatcgttaatttataaaattatgaagcaaaagtac 52441116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 48760426 - 48760467
Alignment:
Q  75 gagtaccagtacacctcattttgtgagtgtaccgtagaagtt 116  Q
    ||||||| ||| ||||||||||||||||||||||||||||||    
T  48760426 gagtaccggtatacctcattttgtgagtgtaccgtagaagtt 48760467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 24511921 - 24511985
Alignment:
Q  55 tttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||||| ||| |||| ||||||||| |||||||||| |||  ||||||||||||||| |||||    
T  24511921 tttataaatttatgaagcaagagtaccggtacacctcaatttacgagtgtaccgtagaaattccc 24511985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 120
Target Start/End: Complemental strand, 32912290 - 32912210
Alignment:
Q  41 aaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgag-tgtaccgtagaagttccca 120  Q
    ||||| |||||| ||||||||| ||| ||||  ||||||||  ||||||||| |||||||| ||||| |||||||||||||    
T  32912290 aaaatgatcgttaatttataaatttatgaagtgagagtaccgatacacctcaatttgtgaggtgtactgtagaagttccca 32912210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 33986181 - 33986278
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||||||||||| | |||||||  | |||||| ||||||||| |||  |||  ||||| ||| || |||||| ||||||||||||||||| ||||||||    
T  33986181 aaatagctatttatttcataaaa--tgatcgttaatttataaatttataaagtgagagtgccaatatacctcaatttgtgagtgtaccgtaaaagttccc 33986278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 5956609 - 5956526
Alignment:
Q  36 cataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||||||| || ||| |||||||||| | | |||  |||||||| ||||| || | |||||| |||||||||||||||||||    
T  5956609 cataaaaaatgatagttaatttataaaaattataagcgagagtaccggtacagcttaatttgtgggtgtaccgtagaagttccc 5956526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 119
Target Start/End: Original strand, 12838097 - 12838176
Alignment:
Q  41 aaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga-gtgtaccgtagaagttccc 119  Q
    ||||| |||||||| |||| || |||  ||| ||||||||| |||||||||||||||| | ||||||| |||||||||||    
T  12838097 aaaataatcgttcacttatcaatttataaaggaagagtaccggtacacctcattttgttaggtgtaccttagaagttccc 12838176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 43146750 - 43146832
Alignment:
Q  41 aaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcccattta 124  Q
    ||||| |||||| | ||||||| ||  |||| | |||||||||||||||||| |||| | ||||||||||||||| ||||||||    
T  43146750 aaaataatcgttaaattataaatttttgaagtaggagtaccagtacacctcaatttgag-gtgtaccgtagaagtccccattta 43146832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 119
Target Start/End: Complemental strand, 50239356 - 50239277
Alignment:
Q  40 aaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| || ||| ||||||||| ||  |||| ||||||||| |||||||| | |||| | |||||||||||||||||||    
T  50239356 aaaaatgatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttgcgggtgtaccgtagaagttccc 50239277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 51610600 - 51610533
Alignment:
Q  55 tttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcccatt 122  Q
    |||||||| ||| |||| |||||||||  ||||||||| |||  || |||||||||||||||||||||    
T  51610600 tttataaatttatgaagcaagagtaccgatacacctcaatttacgaatgtaccgtagaagttcccatt 51610533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 30547952 - 30548014
Alignment:
Q  55 tttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttc 117  Q
    |||||| | ||| |||| ||||||||| |||||||||| |||  |||||||||||||||||||    
T  30547952 tttatagatttatgaagcaagagtacctgtacacctcaatttacgagtgtaccgtagaagttc 30548014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 40054949 - 40054994
Alignment:
Q  75 gagtaccagtacacctcattttgtgag-tgtaccgtagaagttccc 119  Q
    ||||||| |||||||||| |||||||| ||||||||||||||||||    
T  40054949 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 40054994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 43916391 - 43916346
Alignment:
Q  75 gagtaccagtacacctcattttgtgag-tgtaccgtagaagttccc 119  Q
    ||||||| |||||||||| |||||||| ||||||||||||||||||    
T  43916391 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 43916346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 6468845 - 6468793
Alignment:
Q  65 taagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttc 117  Q
    ||||||| | ||||||| |||| | | ||||||||||||||||||||||||||    
T  6468845 taagaagcaggagtaccggtacgctttattttgtgagtgtaccgtagaagttc 6468793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 117
Target Start/End: Original strand, 30572673 - 30572705
Alignment:
Q  85 acacctcattttgtgagtgtaccgtagaagttc 117  Q
    |||||||||||||||| ||||||||||||||||    
T  30572673 acacctcattttgtgaatgtaccgtagaagttc 30572705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Original strand, 47458888 - 47458940
Alignment:
Q  74 agagtaccagtacacctcattttgtgag-tgtaccgtagaagttcccatttaa 125  Q
    |||||| | |||||||||| |||||||| ||||||||||||| ||||||||||    
T  47458888 agagtatcggtacacctcaatttgtgaggtgtaccgtagaagctcccatttaa 47458940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 9e-48; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 32602419 - 32602293
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  32602419 aaaatataaatatt-gacaaa-tagctatttactacataaaaaattatcgttcatttataaaattaagaagcaggagtaccggtacacctcattttgtga 32602322  T
Q  101 gtgtaccgtagaagttcccatttaattat 129  Q
    ||||||||||||||||||| |||||||||    
T  32602321 gtgtaccgtagaagttcccttttaattat 32602293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 25331554 - 25331455
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||    
T  25331554 aaatagctatttactacataaaaaatgatagttcatttataaaattaagaagcaggagtaccggtacacctcattttgtgagtgtaccgtagaagttccc 25331455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 7673411 - 7673295
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||  | ||||||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  7673411 aaaatataaatatt-gacaaa-tagctatttactacataaaaaacgaccgttcatttataaaattaagaagcaggagtaccggtacacctcattttgtga 7673314  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||    
T  7673313 gtgtaccgtagaagttccc 7673295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 9589404 - 9589520
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||||||| |||||||||||| |||||||||||||| |||||||||| | ||||||| ||||||||||||||||||    
T  9589404 aaaatataaatatt-gacaaa-tagctatttaatacataaaaaatgatcgttcatttatataattaagaagtaggagtaccggtacacctcattttgtga 9589501  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||    
T  9589502 gtgtaccgtagaagttccc 9589520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 17451398 - 17451278
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| |||||||| |||||||||||||||| | ||||||| |||||||| |||||||||    
T  17451398 aaaatataaatatt-gacaaa-tagctatttactacataaaaaatgatcgttcacttataaaattaagaagcaggagtaccggtacaccttattttgtga 17451301  T
Q  101 gtgtaccgtagaagttcccattt 123  Q
    |||||||||||||||| ||||||    
T  17451300 gtgtaccgtagaagtttccattt 17451278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 32401195 - 32401079
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||| |||||| |||||||||||||||| | ||||||||| ||||||||||| ||||||    
T  32401195 aaaatataaatatt-gacaaa-tagttatttactacataaaaaatgatcgttgatttataaaattaagatgcaagagtaccggtacacctcatcttgtga 32401098  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||    
T  32401097 gtgtaccgtagaagttccc 32401079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 43440094 - 43439994
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |  |||| | |||||||||||||||||||||| ||||||||||||||    
T  43440094 aaatagctatttactacataaaaaatgatcgttcatttataaaattaagaagcagaagtatcggtacacctcattttgtgagtgtgccgtagaagttccc 43439995  T
Q  120 a 120  Q
    |    
T  43439994 a 43439994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 9122272 - 9122155
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| |||||| |||||||||||| ||||||||||||||||||||||||| |  |||||| |||||||| |||||||||    
T  9122272 aaaatataaatatt-gacaaa-tagttatttattacataaaaaatgatcgttcatttataaaattaagaagcagaagtaccggtacaccttattttgtga 9122175  T
Q  101 gtgtaccgtagaagttccca 120  Q
    ||||||||||||||||||||    
T  9122174 gtgtaccgtagaagttccca 9122155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 1580363 - 1580247
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||||||| ||||||||||||||||||| ||| ||||||||| |||| ||||||||| |||||||||| |||||||    
T  1580363 aaaatataaatatt-gacaaa-tagctatttattacataaaaaattatcgttaattcataaaattatgaagcaagagtaccggtacacctcactttgtga 1580266  T
Q  101 gtgtaccgtagaagttccc 119  Q
    ||||||||||||| |||||    
T  1580265 gtgtaccgtagaaattccc 1580247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 4740515 - 4740631
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||||||||||| |||||| |||||||||| | ||||| || |||||||||||||||||    
T  4740515 aaaatataaatatt-gacaaa-tagttatttactacataaaaaattatcgttcgtttatataattaagaagcaggagtatcaatacacctcattttgtga 4740612  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||| ||||||||||||    
T  4740613 gtgtactgtagaagttccc 4740631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 21404314 - 21404198
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| |||||| |||||||||||| |||||||||||||| |||||||||| | ||||| | ||||||||||||||||||    
T  21404314 aaaatataaatatt-gacaaa-tagatatttaatacataaaaaatgatcgttcatttatataattaagaagtaggagtatcggtacacctcattttgtga 21404217  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||    
T  21404216 gtgtaccgtagaagttccc 21404198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 4298013 - 4297897
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| || ||| |||||||||||||||| | ||||||||| ||| ||||||| ||||||    
T  4298013 aaaatataaatatt-gacaaa-tagctatttactacataaaaaatgattgttaatttataaaattaagacgcaagagtaccggtatacctcatcttgtga 4297916  T
Q  101 gtgtaccgtagaagttccc 119  Q
    ||||||||||||| |||||    
T  4297915 gtgtaccgtagaaattccc 4297897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 33493779 - 33493877
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcc 118  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||| | ||||||||  ||||||||||| |||||||||||||||| |||||||    
T  33493779 aaatagctatttactacataaaaaatgatcgttaatttataaaattaagatgcaagagtactggtacacctcatcttgtgagtgtaccgtaaaagttcc 33493877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 6945649 - 6945746
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttc 117  Q
    ||||||||||| |||||||||||||| |||||| |||||||||||||||| | ||||||||| ||||||||||| || ||||||||||||||||||||    
T  6945649 aaatagctattaactacataaaaaatgatcgttaatttataaaattaagatgcaagagtaccggtacacctcatcttatgagtgtaccgtagaagttc 6945746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 117
Target Start/End: Original strand, 45157806 - 45157918
Alignment:
Q  3 aatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagt 102  Q
    |||||||||||| |||||| ||| |||||| | |||||||||| |||||| ||||||||| ||| |||||||||||| | ||||||||||||||||||||    
T  45157806 aatataaatatt-gacaaa-tagttatttatttcataaaaaatgatcgttaatttataaacttatgaagaaagagtatcggtacacctcattttgtgagt 45157903  T
Q  103 gtaccgtagaagttc 117  Q
    |||||||||||||||    
T  45157904 gtaccgtagaagttc 45157918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 35895427 - 35895301
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| |||||| ||||||||||||  ||||| ||||||||||||| |||| | ||||||| |||||||||| ||| |||    
T  35895427 aaaatataaatatt-gacaaa-tagttatttattacataaaaaatggtcgttaatttataaaattatgaagcaggagtaccggtacacctcactttatga 35895330  T
Q  101 gtgtaccgtagaagttcccatttaattat 129  Q
    |||||||||| |||||||| | |||||||    
T  35895329 gtgtaccgtaaaagttcccttataattat 35895301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 40946878 - 40946764
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| || |||||||||||||| |||||||||||| |||||| ||||||||||||| |||| || |||||| ||||| | || ||| |||    
T  40946878 aaaatataaatatt-ga-aaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagtaatagtaccggtacaacccactttatga 40946781  T
Q  101 gtgtaccgtagaagttc 117  Q
    |||||||||||||||||    
T  40946780 gtgtaccgtagaagttc 40946764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 27401020 - 27401136
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    ||||||||||||||| ||||| ||  |||||| | |||||||||| |||||| ||||||||||||| |||||||||||| |||||||||||||||||| |    
T  27401020 aaaatataaatattt-acaaa-taattatttatttcataaaaaatgatcgttaatttataaaattatgaagaaagagtatcagtacacctcattttgtaa 27401117  T
Q  101 gtgtaccgtagaagttccc 119  Q
     |||||| || ||||||||    
T  27401118 atgtaccataaaagttccc 27401136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 30981175 - 30981294
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    ||||||||||||||  |||||||||||||||| | |||||||||| ||| || ||||||||||||| ||||   |||||||  ||||||||| |||||||    
T  30981175 aaaatataaatatta-acaaaatagctatttatttcataaaaaatgatcattaatttataaaattatgaagcgggagtaccgatacacctcactttgtga 30981273  T
Q  101 gtgtaccgtagaagttcccat 121  Q
    |||||||||| || |||||||    
T  30981274 gtgtaccgtaaaaattcccat 30981294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 18998814 - 18998728
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtac 106  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||| || ||||||  | ||||| ||||| |||||||||    
T  18998814 aaatagctatttactacataaaaaatgatcgttcatgtataaaattaagaagcaaaagtaccgatgcacctaattttttgagtgtac 18998728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 44143321 - 44143228
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttg 97  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| |||||| |||||||||| ||||||  | ||||||| |||||||||||||||    
T  44143321 aaaatataaatatt-gacaaa-tagctatttactacataaaaaatgatcgtttatttataaaa-taagaaacaggagtaccggtacacctcattttg 44143228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 14840088 - 14840199
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| || |||||||||||||||||| ||| | ||||| || || || ||||||| |||    
T  14840088 aaaatataaatatt-gacaaa-tagctatttactacataaaaaat-atagttcatttataaaattaaaaagcaggagtatcaatatacttcattttatga 14840184  T
Q  101 gtgtaccgtagaagtt 116  Q
    ||||| ||||||||||    
T  14840185 gtgta-cgtagaagtt 14840199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 4049076 - 4048984
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaa 113  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||  ||| || ||  |||||||||||| | | ||||||||||||    
T  4049076 aaatagttatttactacataaaaaatgatcgttcatttataaaattaagaag-cagaatatcaacacacctcattttataaatgtaccgtagaa 4048984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 38073185 - 38073104
Alignment:
Q  41 aaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgag-tgtaccgtagaagttcccat 121  Q
    ||||| |||||| ||||||||| ||| |||| ||||||||| |||||||||| |||||||| ||||||||||||||||||||    
T  38073185 aaaatgatcgttaatttataaatttatgaagtaagagtaccggtacacctcaatttgtgaggtgtaccgtagaagttcccat 38073104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 37781945 - 37781866
Alignment:
Q  41 aaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga-gtgtaccgtagaagttccc 119  Q
    ||||| |||||||||||||||| ||| |||| ||||||||  |||||||||| ||||||| |||||||||||||||||||    
T  37781945 aaaatgatcgttcatttataaatttatgaaggaagagtacatgtacacctcaatttgtgaggtgtaccgtagaagttccc 37781866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 40495737 - 40495858
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| || |||||| || ||||||| || || ||| |||||||||||||||||  |  |||| | || |||||||||||||||    
T  40495737 aaaatataaatatt-gacaaa-taactatttcctgcataaaatatgattgttaatttataaaattaagaaacagaagtatcggtgcacctcattttgtga 40495834  T
Q  101 gtgtaccgtagaagttcccattta 124  Q
    |||||| |||||||||||| ||||    
T  40495835 gtgtacagtagaagttccctttta 40495858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 3261196 - 3261312
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| || ||||||| |||||  ||||| |||||| |||||| |||| |||||| | ||||  |||||||| ||||| |||| ||| |||    
T  3261196 aaaatataaatatt-ga-aaaatagttatttcttacatgaaaaatgatcgttaatttgtaaaatcatgaagcgagagtaccggtacatctcactttatga 3261293  T
Q  101 gtgtaccgtagaagttccc 119  Q
     ||||||||||||||||||    
T  3261294 atgtaccgtagaagttccc 3261312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 119
Target Start/End: Original strand, 12182886 - 12182965
Alignment:
Q  41 aaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga-gtgtaccgtagaagttccc 119  Q
    ||||| |||||| |||||| || |||  ||| ||||||||| |||||||||||||||| | |||||||||||||||||||    
T  12182886 aaaataatcgttaatttatcaatttataaagtaagagtaccggtacacctcattttgttaggtgtaccgtagaagttccc 12182965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 125
Target Start/End: Original strand, 11088553 - 11088638
Alignment:
Q  41 aaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgag-tgtaccgtagaagttcccatttaa 125  Q
    ||||| || ||| ||||||||| ||| | || ||||||||  |||||||||| |||||||| |||||||||||||||||| |||||    
T  11088553 aaaatgattgttaatttataaatttatggaggaagagtactggtacacctcaatttgtgaggtgtaccgtagaagttcccttttaa 11088638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 116
Target Start/End: Complemental strand, 36754371 - 36754339
Alignment:
Q  84 tacacctcattttgtgagtgtaccgtagaagtt 116  Q
    |||||||||||||||||||||||||||||||||    
T  36754371 tacacctcattttgtgagtgtaccgtagaagtt 36754339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 5615724 - 5615791
Alignment:
Q  54 atttataaaattaagaagaaagagtaccagtacacctcattttgtgag-tgtaccgtagaagttccca 120  Q
    ||||||||| |||||||| |||||||||  ||||||||| ||| |||| |||| ||||||||||||||    
T  5615724 atttataaatttaagaagtaagagtaccgatacacctcaatttatgaggtgtatcgtagaagttccca 5615791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 39620484 - 39620544
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaa 63  Q
    ||||||||||||||  | |||||||||||||  |||||||||||| |||||| ||||||||||    
T  39620484 aaaatataaatatt--aaaaaatagctatttgttacataaaaaatgatcgttaatttataaaa 39620544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 74 - 120
Target Start/End: Complemental strand, 45690545 - 45690498
Alignment:
Q  74 agagtaccagtacacctcattttgtgag-tgtaccgtagaagttccca 120  Q
    |||||||| |||||||||| |||||||| |||||||||||||||||||    
T  45690545 agagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccca 45690498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 2859406 - 2859349
Alignment:
Q  73 aagagtaccagtacacctcattttgtgag-tgtaccgtagaagttcccatttaattat 129  Q
    ||||||||| |||||||||| ||| |||| |||||||||||||||||| ||| |||||    
T  2859406 aagagtaccggtacacctcaatttatgagatgtaccgtagaagttccctttttattat 2859349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 8333936 - 8333891
Alignment:
Q  75 gagtaccagtacacctcattttgtgag-tgtaccgtagaagttccc 119  Q
    ||||||| |||||||||| |||||||| ||||||||||||||||||    
T  8333936 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 8333891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 121
Target Start/End: Original strand, 33494268 - 33494344
Alignment:
Q  47 atcgttcatttataaaattaagaagaaagagtaccagtaca--cctcattttgtgagtgtaccgtagaagttcccat 121  Q
    |||||| ||||||||| | |||||| |||||||||  ||||  ||||| |||  |||||||||||||||||||||||    
T  33494268 atcgttaatttataaattaaagaagcaagagtaccgatacatacctcaatttacgagtgtaccgtagaagttcccat 33494344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 38617793 - 38617728
Alignment:
Q  54 atttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||||| | ||| |||| ||||||||| |||||||||| |||  ||||||||||| |||||||||    
T  38617793 atttatagatttacgaagcaagagtaccggtacacctcaatttacgagtgtaccgttgaagttccc 38617728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 41555476 - 41555431
Alignment:
Q  75 gagtaccagtacacctcattttgtgag-tgtaccgtagaagttccc 119  Q
    ||||||| |||||||||| |||||||| ||||||||||||||||||    
T  41555476 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 41555431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 17821867 - 17821927
Alignment:
Q  58 ataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcc 118  Q
    ||||| ||| |||| |||||||||| ||||||| | ||| ||||||||| |||||||||||    
T  17821867 ataaatttaggaagcaagagtaccaatacaccttaatttatgagtgtacagtagaagttcc 17821927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 21995790 - 21995691
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaatt-aagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcc 118  Q
    ||||||||||||  |||| ||||||| ||| || ||||||| |||| |||||  ||||||||  |||||||||| || | ||||||||||||||| ||||    
T  21995790 aaatagctatttcttaca-aaaaaataatccttaatttatagaatttaagaaacaagagtactggtacacctcaattagcgagtgtaccgtagaaattcc 21995692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1319 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold1319
Description:

Target: scaffold1319; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 159 - 41
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||| |||||||||||||||||    
T  159 aaaatataaatatt-gacaaa-tagctatttactacataaaaaatgatcgttcatttataaaattaagaagcaggagtaccaatacacctcattttgtga 62  T
Q  101 gtgtaccgtagaagttcccat 121  Q
    |||||||||||||||||||||    
T  61 gtgtaccgtagaagttcccat 41  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 8e-42; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 29606384 - 29606268
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| || |||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  29606384 aaaatataaatatt-gacaaa-taactatttactacataaaaaataatcgttcatttataaaattaagaagcaagagtcccagtacacctcattttgtga 29606287  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||    
T  29606286 gtgtaccgtagaagttccc 29606268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 15716196 - 15716310
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| || || ||||||||||||||||| ||||||||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  15716196 aaaatataaatatt-gacaaa-taactgtttactacataaaaaatgatcgttcatttataaaattaagaagtaggagtaccggtacacctcattttgtga 15716293  T
Q  101 gtgtaccgtagaagttc 117  Q
    |||||||||||||||||    
T  15716294 gtgtaccgtagaagttc 15716310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 24953042 - 24952928
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||| | || |||| ||||| ||||||||||||    
T  24953042 aaaatataaatatt-gacaaa-tagttatttactacataaaaaatgatcgttcatttataaaattaagaagtaggaataccggtacatctcattttgtga 24952945  T
Q  101 gtgtaccgtagaagttc 117  Q
    |||||||||||||||||    
T  24952944 gtgtaccgtagaagttc 24952928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 26605155 - 26605056
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||| ||||||| || |||||||||||||||| ||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  26605155 aaataactatttattatataaaaaattatcgttaatttataaaattatgaagcaagagtaccggtacacctcattttgtgagtgtaccgtagaagttccc 26605056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 46575219 - 46575101
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaatt-atcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtg 99  Q
    ||||||||||||||||||||| || |||||||||| | |||||| | ||||||||||||||||||||||||| | ||||||| |||||||||||||||||    
T  46575219 aaaatataaatatttgacaaa-taactatttactataaaaaaaaatgatcgttcatttataaaattaagaagcaggagtaccggtacacctcattttgtg 46575121  T
Q  100 agtgtaccgtagaagttccc 119  Q
    | ||||||||||||||||||    
T  46575120 aatgtaccgtagaagttccc 46575101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 11750535 - 11750419
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||| |||||||| |||||||||||||||| | |||||||| |||| || |||||||||    
T  11750535 aaaatataaatatt-gacaaa-tagttatttactacataaaaaatgatcgttcaattataaaattaagaagcaggagtaccaatacatcttattttgtga 11750438  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||    
T  11750437 gtgtaccgtagaagttccc 11750419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 35291425 - 35291327
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcc 118  Q
    |||||| |||||| | |||||||||| |||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35291425 aaatagttatttatttcataaaaaataatcgttaatttataaaattatgaagaaagagtaccggtacacctcattttgtgagtgtaccgtagaagttcc 35291327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 7574650 - 7574549
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||| | |||||||| |||||  |||||||||||||||||||||    
T  7574650 aaatagctatttattacataaaaaattatcgttcatttataaaattaagaagcaggagtatcggtacaccttattttacgagtgtaccgtagaagttccc 7574551  T
Q  120 at 121  Q
    ||    
T  7574550 at 7574549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 30076931 - 30077044
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||| ||| ||||||||||||||||||||| | ||||||| | ||||||||||||||||    
T  30076931 aaaatataaatatt-gacaaa-tagttatttactacataaaaaatgatcattcatttataaaattaagaaggaggagtaccggcacacctcattttgtga 30077028  T
Q  101 gtgtaccgtagaagtt 116  Q
    |||||||||| |||||    
T  30077029 gtgtaccgtaaaagtt 30077044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 23110546 - 23110426
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||| ||| ||||||||||||||||| ||  | ||||||||||||| ||||||||||||    
T  23110546 aaaatataaatatt-gacaaa-tagttatttactacataaaaaatgatcattcatttataaaattaaaaaacaggagtaccagtacatctcattttgtga 23110449  T
Q  101 gtgtaccgtagaagttcccattt 123  Q
    |||||||||| || |||||||||    
T  23110448 gtgtaccgtataaattcccattt 23110426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 37504675 - 37504559
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| |||||| | |||||||||| |||||| ||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  37504675 aaaatataaatatt-gacaaa-tagttatttatttcataaaaaatgatcgttaatttataaaattatgaataaagagtatcagtacacctcattttgtga 37504578  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||||||| ||||    
T  37504577 gtgtaccgtagaagatccc 37504559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 38665573 - 38665457
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| || |||||||||||||||||||| |||||||||||||||||||||| |    ||||||| |||||| |||||||||||    
T  38665573 aaaatataaatatt-gacaaa-taactatttactacataaaaaatgatcgttcatttataaaattaaggaaccggagtaccggtacacttcattttgtga 38665476  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||    
T  38665475 gtgtaccgtagaagttccc 38665457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 47642789 - 47642905
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||  ||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||   ||||| ||||||||||||    
T  47642789 aaaatataaatatt-gacaat-tagctatttactacataaaaaacgatcgttcatttataaaattaagaagcatgagtattggtacatctcattttgtga 47642886  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||    
T  47642887 gtgtaccgtagaagttccc 47642905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 39 - 124
Target Start/End: Original strand, 15954587 - 15954672
Alignment:
Q  39 aaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcccattta 124  Q
    ||||||| |||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  15954587 aaaaaatgatcgttaatttataaaattatgaagaaagagtaccggtacacctcattttgtgagtgtaccgtagaagttccctttta 15954672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 28264849 - 28264748
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||| | ||||| | |||||||| |||||  |||||||||||||||||||||    
T  28264849 aaatagttatttattacataaaaaattatcgttcatttataaaattaagaagcaggagtatcggtacaccttattttacgagtgtaccgtagaagttccc 28264750  T
Q  120 at 121  Q
    ||    
T  28264749 at 28264748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 1269124 - 1269008
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||| | |  ||||  |||||||||||||||||    
T  1269124 aaaatataaatatt-gacaaa-tagctatttactacataaaaaatgatcgttcgtttataaaattaagaagcagggataccgatacacctcattttgtga 1269027  T
Q  101 gtgtaccgtagaagttccc 119  Q
    ||| ||| |||||||||||    
T  1269026 gtgaaccatagaagttccc 1269008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 126
Target Start/End: Complemental strand, 6791539 - 6791437
Alignment:
Q  24 agctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcccattt 123  Q
    ||||||||| | |||||||||| ||||||  |||||||||||| ||| |||||||||| |||||||||||||||| |||||||||||||||||||||| |    
T  6791539 agctatttatttcataaaaaatgatcgttactttataaaattatgaaaaaagagtaccggtacacctcattttgtaagtgtaccgtagaagttcccatat 6791440  T
Q  124 aat 126  Q
    |||    
T  6791439 aat 6791437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 116
Target Start/End: Complemental strand, 41968527 - 41968435
Alignment:
Q  24 agctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagtt 116  Q
    ||||||||| | |||||||||| |||||| ||||||||||||| ||| ||||||||||  |||||||||||||||||||||||||||||||||    
T  41968527 agctatttatttcataaaaaataatcgttaatttataaaattatgaaaaaagagtaccgatacacctcattttgtgagtgtaccgtagaagtt 41968435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 3214811 - 3214932
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaa-----gagtaccagtacacctcattt 95  Q
    |||||||||||||| |||||| |||||||||| |||||||||||| |||||| ||||||||||||| |||| ||     ||||||| |||||||||| ||    
T  3214811 aaaatataaatatt-gacaaa-tagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaagactggagtaccggtacacctcactt 3214908  T
Q  96 tgtgagtgtaccgtagaagttccc 119  Q
    ||||||||||||||||||||||||    
T  3214909 tgtgagtgtaccgtagaagttccc 3214932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 32529279 - 32529180
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| |||||| | |||||||||| |||||| ||||||||||||| ||||||||||||||  ||  ||||||||||||||||||||||||||||||||    
T  32529279 aaatagttatttatttcataaaaaatgatcgttaatttataaaattatgaagaaagagtaccgatatgcctcattttgtgagtgtaccgtagaagttccc 32529180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 23406768 - 23406653
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| || ||||||| |||||| | |||||||||| |||||| || |||||||||| |||| | ||||||| ||||||||||||||||||    
T  23406768 aaaatataaatatt-ga-aaaatagttatttattgcataaaaaatgatcgttaatatataaaattatgaagcaggagtaccggtacacctcattttgtga 23406671  T
Q  101 gtgtaccgtagaagttcc 118  Q
    |||||||||| |||||||    
T  23406670 gtgtaccgtataagttcc 23406653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 38666160 - 38666278
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| || |||||||| ||||||||||| ||||||||||||||||||||| ||  | ||||||| |||||||||||||||| |    
T  38666160 aaaatataaatatt-gacaaa-taactatttaccacataaaaaatgatcgttcatttataaaattaaaaaacaggagtaccggtacacctcattttgtaa 38666257  T
Q  101 gtgtaccgtagaagttcccat 121  Q
    |||||  |||||| |||||||    
T  38666258 gtgtatagtagaaattcccat 38666278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 35358010 - 35358109
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| |||||| | |||||||||| ||| || |||||||||||||  |||||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  35358010 aaatagttatttatttcataaaaaatgatctttaatttataaaattattaagaaagactaccggtacacctcattttgtgagtgtaccgtagaaattccc 35358109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 18520209 - 18520326
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacat-aaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtg 99  Q
    |||||||||||||||||| |||||| |||||||||||| ||||||| ||||||||||||||||      ||| | ||||||| ||||| |||||||||||    
T  18520209 aaaatataaatatttgac-aaatagttatttactacataaaaaaataatcgttcatttataaa------aagtaggagtaccggtacatctcattttgtg 18520301  T
Q  100 agtgtaccgtagaagttcccattta 124  Q
    |||||||| || |||||||| ||||    
T  18520302 agtgtaccataaaagttccctttta 18520326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 3602558 - 3602634
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagta 79  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| |||||| |||||||||||||||| | |||||||    
T  3602558 aaaatataaatatt-gacaaa-tagctatttactacataaaaaatgatcgttaatttataaaattaagatgcaagagta 3602634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 30891581 - 30891663
Alignment:
Q  37 ataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||||||| |||||| ||||||||||||| |||||||||||| | |||||||| ||||||||| ||| |||| |||||||||    
T  30891581 ataaaaaatgatcgttaatttataaaattatgaagaaagagtatcggtacaccttattttgtgattgtgccgttgaagttccc 30891663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 24812372 - 24812484
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| || ||||||||||||||||||||    |||||||||||||||||| ||  | |||||||  ||||||| ||||||| |    
T  24812372 aaaatataaatatt-gacaaa-taactatttactacataaaaaat----gttcatttataaaattaaaaaacaggagtaccgatacaccttattttgtta 24812465  T
Q  101 gtgtaccgtagaagttccc 119  Q
    ||||| |||||||||||||    
T  24812466 gtgtatcgtagaagttccc 24812484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 17306717 - 17306603
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| || |||||||||||||  ||||| |||||| |||||| |||| |||||| | ||||  |||||||| ||||| |||| |||||||    
T  17306717 aaaatataaatatt-ga-aaaatagctatttcttacatgaaaaatgatcgttaatttgtaaaatcatgaagcgagagtaccggtacatctcactttgtga 17306620  T
Q  101 gtgtaccgtagaagttc 117  Q
    ||||||| |||||||||    
T  17306619 gtgtaccatagaagttc 17306603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 41046921 - 41046838
Alignment:
Q  36 cataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||||||||||||||| |||||||||||||  ||| || |||| | |||||||||| ||||| |||||||||||||| |||||    
T  41046921 cataaaaaattatcgttaatttataaaattataaagcaatagtatcggtacacctcactttgtaagtgtaccgtagaaattccc 41046838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 45232163 - 45232053
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||| || | ||||||| |||||||||||| ||| || |||||||||||||||| | ||||||||| |||||| | || || |||    
T  45232163 aaaatataaatatt-gacataaaa-ctatttattacataaaaaatgatcattaatttataaaattaagatgcaagagtaccggtacacat-atcttatga 45232067  T
Q  101 gtgtaccgtagaag 114  Q
    ||||||||||||||    
T  45232066 gtgtaccgtagaag 45232053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 119
Target Start/End: Complemental strand, 22967489 - 22967409
Alignment:
Q  39 aaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||||| |||||| ||||||||||||| |||| ||||||||| |||||||||| ||| | ||||||||||| | ||||||    
T  22967489 aaaaaataatcgttaatttataaaattatgaagtaagagtaccggtacacctcaatttataagtgtaccgtaaatgttccc 22967409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 5582977 - 5582860
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| || ||||||  |||||  ||||| |||||| |||||| |||| |||| ||| ||||  ||||||||  ||||| ||| |||||||    
T  5582977 aaaatataaatatt-ga-aaaatatttatttcttacatgaaaaatgatcgttaatttgtaaatttacgaagcgagagtaccgatacacatcactttgtga 5582880  T
Q  101 gtgtaccgtagaagttccca 120  Q
    ||||||||||||||||||||    
T  5582879 gtgtaccgtagaagttccca 5582860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 39558905 - 39558980
Alignment:
Q  42 aaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttc 117  Q
    |||| ||||||||||||||||||||||||| |  || ||| |||||||||||||| | ||||||| ||||||||||    
T  39558905 aaatgatcgttcatttataaaattaagaagtagaaggaccggtacacctcattttataagtgtactgtagaagttc 39558980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 2291121 - 2291187
Alignment:
Q  54 atttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccca 120  Q
    ||||||||| ||  || ||||||||||| ||||||||||||||  |||||||||||||||| |||||    
T  2291121 atttataaatttgggatgaaagagtaccggtacacctcattttacgagtgtaccgtagaagctccca 2291187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 34363693 - 34363614
Alignment:
Q  41 aaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgag-tgtaccgtagaagttccc 119  Q
    ||||| |||||| |||||| || ||| |||| ||||||||  |||||| ||||||||| || ||||||||||||||||||    
T  34363693 aaaataatcgttaatttatcaatttatgaagcaagagtactggtacacgtcattttgttaggtgtaccgtagaagttccc 34363614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 118
Target Start/End: Complemental strand, 36533362 - 36533327
Alignment:
Q  83 gtacacctcattttgtgagtgtaccgtagaagttcc 118  Q
    ||||||||||| ||||||||||||||||||||||||    
T  36533362 gtacacctcatcttgtgagtgtaccgtagaagttcc 36533327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 119
Target Start/End: Complemental strand, 38882865 - 38882818
Alignment:
Q  73 aagagtaccagtacacctcattttgtga-gtgtaccgtagaagttccc 119  Q
    ||||||||| |||||||||||||||| | |||||||||||||||||||    
T  38882865 aagagtaccggtacacctcattttgttaggtgtaccgtagaagttccc 38882818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 5215386 - 5215432
Alignment:
Q  75 gagtaccagtacacctcattttgtga-gtgtaccgtagaagttccca 120  Q
    ||||||| |||||||||| ||||||| ||||||||||||||||||||    
T  5215386 gagtaccggtacacctcaatttgtgatgtgtaccgtagaagttccca 5215432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 26413724 - 26413634
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaa 113  Q
    ||||| ||||||| |||||||||||| ||| || |||| |||||||| |||| | |||||||||  ||||||| ||||| |||||||| |||||    
T  26413724 aaataactatttattacataaaaaatgatcattaattt-taaaattatgaagcaggagtaccag--cacctcactttgtaagtgtaccatagaa 26413634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 34118830 - 34118876
Alignment:
Q  73 aagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||||||||||||||| | |||| | |||||||||||||||||||    
T  34118830 aagagtaccagtacaccttaatttgcgggtgtaccgtagaagttccc 34118876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 21919733 - 21919688
Alignment:
Q  75 gagtaccagtacacctcattttgtgag-tgtaccgtagaagttccc 119  Q
    ||||||| |||||||||| |||||||| ||||||||||||||||||    
T  21919733 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 21919688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 23182435 - 23182390
Alignment:
Q  75 gagtaccagtacacctcattttgtgag-tgtaccgtagaagttccc 119  Q
    |||||||||||||||| | |||||||| ||||||||||||||||||    
T  23182435 gagtaccagtacaccttaatttgtgaggtgtaccgtagaagttccc 23182390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 30936159 - 30936094
Alignment:
Q  54 atttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||||||| ||  |||| ||||||||| |||||||| | |||| | |||||||||||||||||||    
T  30936159 atttataaatttttgaagtaagagtaccggtacaccttaatttgcgggtgtaccgtagaagttccc 30936094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 41769365 - 41769289
Alignment:
Q  41 aaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga-gtgtaccgtagaagtt 116  Q
    ||||| |||||| | ||||||||||  |||| | |||||||||||||||||| ||| ||| ||||| ||||||||||    
T  41769365 aaaataatcgttaaattataaaattttgaagcaggagtaccagtacacctcaatttatgaggtgtatcgtagaagtt 41769289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 44963902 - 44963822
Alignment:
Q  40 aaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccca 120  Q
    |||||| || ||| ||||||||| ||  |||| ||||||||| |||||||| |  ||||| ||||||| ||||||||||||    
T  44963902 aaaaatgatagttaatttataaatttttgaagtaagagtaccggtacaccttaaattgtgggtgtaccatagaagttccca 44963822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 85; Significance: 1e-40; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 35501080 - 35501206
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| |||||| ||||||| |||||||||| | ||||||| ||||||||||||||||||    
T  35501080 aaaatataaatatt-gacaaa-tagctatttactacataaaaaatgatcgtttatttatagaattaagaagcaggagtaccggtacacctcattttgtga 35501177  T
Q  101 gtgtaccgtagaagttcccatttaattat 129  Q
    ||||||| |||||||||||||||||||||    
T  35501178 gtgtaccatagaagttcccatttaattat 35501206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 53289346 - 53289227
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| |||||||||||| |||||| ||||||||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  53289346 aaaatataaatatt-gacaaa-tagttatttactacatcaaaaatgatcgttcatttataaaattaagaagcaggagtaccggtacacctcattttgtga 53289249  T
Q  101 gtgtaccgtagaagttcccatt 122  Q
    ||||||||||||||||||||||    
T  53289248 gtgtaccgtagaagttcccatt 53289227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 47746119 - 47746233
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||||||| ||||||||||||||||||| ||||||||||||| |||| ||||||| | ||||||||||||||||||    
T  47746119 aaaatataaatatt-gacaaa-tagctatttattacataaaaaattatcgttaatttataaaattatgaagcaagagtatcggtacacctcattttgtga 47746216  T
Q  101 gtgtaccgtagaagttc 117  Q
    |||||||||||||||||    
T  47746217 gtgtaccgtagaagttc 47746233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 26850216 - 26850343
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||  ||||||||||||| | |    
T  26850216 aaaatataaatatt-gacaaa-tagctatttactacataaaaaatgatcgttcatttataaaattaagaagtaggagtaccgatacacctcattttataa 26850313  T
Q  101 gtgtaccgtagaagttcccatttaattatga 131  Q
    ||||||| |||||||||||| ||||||||||    
T  26850314 gtgtaccatagaagttccca-ttaattatga 26850343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 26885089 - 26884973
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| || |||||||||||||||||||| |||||| |||||||||||||||| | ||||||||| ||||||||||| ||||||    
T  26885089 aaaatataaatatt-gacaaa-taactatttactacataaaaaataatcgttaatttataaaattaagatgtaagagtaccggtacacctcatcttgtga 26884992  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||    
T  26884991 gtgtaccgtagaagttccc 26884973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 7352282 - 7352163
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||  |||| ||||||||||||    
T  7352282 aaaatataaatatt-gacaaa-tagctatttactacataaaaaatgatcgttcatttataaaattaagaagcaggagtaccgatacatctcattttgtga 7352185  T
Q  101 gtgtaccgtagaagttcccatt 122  Q
    |||||||| ||||||| |||||    
T  7352184 gtgtaccgcagaagtttccatt 7352163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 54428785 - 54428900
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||  | ||||| | |||||||||||||| |||    
T  54428785 aaaatataaatatt-gacaaa-tagctatttactacataaaaaattatcgttcatttataaaattaagaaacaggagtatcggtacacctcattttatga 54428882  T
Q  101 gtgtaccgtagaagttcc 118  Q
    |||||| |||||||||||    
T  54428883 gtgtacagtagaagttcc 54428900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 29388811 - 29388690
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||| | ||||||  ||||||||||||||||||    
T  29388811 aaaatataaatatt-gacaaa-tagctatttaatacataaaaaatgatctttcatttataaaattaagaagtaggagtactggtacacctcattttgtga 29388714  T
Q  101 gtgtaccgtagaagttcccattta 124  Q
    || |||||||||||||||| ||||    
T  29388713 gtataccgtagaagttccccttta 29388690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 30349311 - 30349410
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| |  ||||||  ||||| ||||||||||||||||||||||||||||||    
T  30349311 aaatagctatttattacataaaaaattatcgttcatttataaaattaagaagcagaagtaccgatacacttcattttgtgagtgtaccgtagaagttccc 30349410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 37520801 - 37520702
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| |||||| | |||||||||| |||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37520801 aaatagttatttatttcataaaaaatgatcgttaatttataaaattatgaagaaagagtaccggtacacctcattttgtgagtgtaccgtagaagttccc 37520702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 1129245 - 1129129
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||||||| |||||||||||| |||||| ||||||||||||| |||| | ||||||| |||||||||| |||||||    
T  1129245 aaaatataaatatt-gacaaa-tagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtga 1129148  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||    
T  1129147 gtgtaccgtagaagttccc 1129129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 35137729 - 35137846
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| || ||||||| |||||| |||||||||||||||||||||||||||||||||||||| | ||||| | |||||||| |||||  ||    
T  35137729 aaaatataaatatt-gataaaatagttatttattacataaaaaattatcgttcatttataaaattaagaagcaggagtatcggtacaccttattttacga 35137827  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||    
T  35137828 gtgtaccgtagaagttccc 35137846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 39987467 - 39987351
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||  | ||||||| |||||||||||||| |||    
T  39987467 aaaatataaatatt-gacaaa-tagctatttactacataaaaaatgatcattcatttataaaattaagaaacaggagtaccggtacacctcattttatga 39987370  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||| ||||||||||||||    
T  39987369 gtgtcccgtagaagttccc 39987351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 44653482 - 44653579
Alignment:
Q  24 agctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcccat 121  Q
    ||||||||| | |||||||||| |||||| ||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  44653482 agctatttatttcataaaaaataatcgttaatttataaaattatgaaaaaagagtaccggtacacctcattttgtgagtgtaccgtagaagttcccat 44653579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 23456769 - 23456861
Alignment:
Q  24 agctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagtt 116  Q
    ||||||||| ||||||||||||||||||| ||||||||||||| |||||| ||||||| |||||||||| |||||||||||||||||||||||    
T  23456769 agctatttattacataaaaaattatcgttaatttataaaattatgaagaaggagtaccggtacacctcactttgtgagtgtaccgtagaagtt 23456861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 40478064 - 40478164
Alignment:
Q  19 aaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcc 118  Q
    |||||||||||||| |||||||||||| |||||| ||||||||||||| |||| | ||||||| |||||||||| |||||||||||||||||||||||||    
T  40478064 aaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtgagtgtaccgtagaagttcc 40478163  T
Q  119 c 119  Q
    |    
T  40478164 c 40478164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 42621964 - 42621847
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| || ||||||| ||||||||||||  ||||| ||||||||||||| |||| ||||||||  ||||||||||||||||||    
T  42621964 aaaatataaatatt-gacaaa-taactatttattacataaaaaatggtcgttaatttataaaattatgaagcaagagtactggtacacctcattttgtga 42621867  T
Q  101 gtgtaccgtagaagttccca 120  Q
    ||||||||||||||||||||    
T  42621866 gtgtaccgtagaagttccca 42621847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 15997111 - 15997226
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||| ||||||||| |||||| |||||||||||||||| |  |||||||| ||||||||||| || |||    
T  15997111 aaaatataaatatt-gacaaa-tagctatttactatataaaaaataatcgttaatttataaaattaagatgcgagagtaccggtacacctcatcttatga 15997208  T
Q  101 gtgtaccgtagaagttcc 118  Q
    ||||||||||||||||||    
T  15997209 gtgtaccgtagaagttcc 15997226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 117
Target Start/End: Complemental strand, 46507459 - 46507363
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttc 117  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||| || | ||||||||  ||||||||||||||||||||||||||||||||||    
T  46507459 aaatagttatttactacataaaaaatgatcgttcatttataaaattaa-aaaacagagtaccgatacacctcattttgtgagtgtaccgtagaagttc 46507363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 112
Target Start/End: Original strand, 9507210 - 9507302
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtaga 112  Q
    |||||||||||||| ||||||||||| |||||| |||||||||||||||| | ||||||||| ||||||||||| ||||||||||||||||||    
T  9507210 aaatagctatttacaacataaaaaatgatcgttaatttataaaattaagatgcaagagtaccggtacacctcatcttgtgagtgtaccgtaga 9507302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 112
Target Start/End: Original strand, 9515185 - 9515277
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtaga 112  Q
    |||||||||||||| ||||||||||| |||||| |||||||||||||||| | ||||||||| ||||||||||| ||||||||||||||||||    
T  9515185 aaatagctatttacaacataaaaaatgatcgttaatttataaaattaagatgcaagagtaccggtacacctcatcttgtgagtgtaccgtaga 9515277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 26012313 - 26012203
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| || |||||||||||||||||||| ||||||||||||||||||||||||| | |||||    |||||||||||||||||    
T  26012313 aaaatataaatatt-gacaaa-taactatttactacataaaaaataatcgttcatttataaaattaagaagcaggagtattgatacacctcattttgtga 26012216  T
Q  101 gtgtaccgtagaa 113  Q
    |||||||||||||    
T  26012215 gtgtaccgtagaa 26012203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 34825558 - 34825660
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||| ||| |||||||||||||||||| |  |||||| ||||||||||||||||||    
T  34825558 aaaatataaatatt-gacaaa-tagctatttactacataaaaaattattgtttatttataaaattaagaagcagaagtaccggtacacctcattttgtga 34825655  T
Q  101 gtgta 105  Q
    |||||    
T  34825656 gtgta 34825660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 41217345 - 41217459
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||  |||||||||||||||||| ||| ||||||||||||||||||||| | ||||| || ||||||| |||||||||    
T  41217345 aaaatataaatatt-gacaaa-tagtcatttactacataaaaaatgatcattcatttataaaattaagaagcaggagtatcaatacaccttattttgtga 41217442  T
Q  101 gtgtaccgtagaagttc 117  Q
    |||||||||||||||||    
T  41217443 gtgtaccgtagaagttc 41217459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 44379530 - 44379412
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| |||||| ||||||||||||  ||||| ||||||||||||| |||| | ||||||| |||||||||| |||||||    
T  44379530 aaaatataaatatt-gacaaa-tagttatttattacataaaaaatggtcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtga 44379433  T
Q  101 gtgtaccgtagaagttcccat 121  Q
    |||||||||||||||||||||    
T  44379432 gtgtaccgtagaagttcccat 44379412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 7862735 - 7862848
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||||||| ||||||||||||||||||| ||||||||||||| |||| | ||||||| |||||||||| |||||||    
T  7862735 aaaatataaatatt-gacaaa-tagctatttattacataaaaaattatcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtga 7862832  T
Q  101 gtgtaccgtagaagtt 116  Q
     |||||| ||||||||    
T  7862833 atgtaccatagaagtt 7862848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 42478992 - 42479091
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| |||||| ||||||||||||||||||| ||||||||||||| |||  ||||||||| |||||||| ||||||||| ||||||||||||||||||    
T  42478992 aaatagttatttattacataaaaaattatcgttaatttataaaattatgaaacaagagtaccggtacaccttattttgtgaatgtaccgtagaagttccc 42479091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 50258108 - 50258201
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaa 113  Q
    |||||| ||||||||||||||||||| |||||||||| |||||||||||||| | || ||||  ||||||||||||||||||||||||||||||    
T  50258108 aaatagttatttactacataaaaaatgatcgttcattcataaaattaagaagcatgaataccgatacacctcattttgtgagtgtaccgtagaa 50258201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 41982275 - 41982389
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| || ||||||| ||||||||||||||||||  |||||||||||||  ||| |||||||||  ||||||||| |||||||    
T  41982275 aaaatataaatatt-gacaaa-taactatttattacataaaaaattatcgtcaatttataaaattataaagtaagagtaccgatacacctcactttgtga 41982372  T
Q  101 gtgtaccgtagaagttc 117  Q
    |||||||||||||||||    
T  41982373 gtgtaccgtagaagttc 41982389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 1021266 - 1021380
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| || ||||||||  |||||||||| |||||||||||||||||||| |||| | |||||||  |||||||||||||||||    
T  1021266 aaaatataaatatt-gacaaa-tatctatttac--cataaaaaatgatcgttcatttataaaattaggaagcaggagtaccgatacacctcattttgtga 1021361  T
Q  101 gtgtaccgtagaagttccc 119  Q
    ||||| |||||||||||||    
T  1021362 gtgtatcgtagaagttccc 1021380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 25482367 - 25482250
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||| ||| || |||||||||||||||| | |||| |||| ||||||||||| |||| |    
T  25482367 aaaatataaatatt-gacaaa-tagttatttactacataaaaaatgatcattaatttataaaattaagatgcaagaataccggtacacctcatcttgtaa 25482270  T
Q  101 gtgtaccgtagaagttccca 120  Q
    ||||||||||||| ||||||    
T  25482269 gtgtaccgtagaaattccca 25482250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 36220696 - 36220812
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| |||||| |||||||||||| || ||| ||||||||||||| |||| || |||| | |||||||||| |||||||    
T  36220696 aaaatataaatatt-gacaaa-tagatatttattacataaaaaataattgttaatttataaaattatgaagcaaaagtatcggtacacctcactttgtga 36220793  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||    
T  36220794 gtgtaccgtagaagttccc 36220812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 26457069 - 26456943
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||||||| |||||||||||| |||||| ||||||||||||| |||| | ||||||| || ||||||| ||| |||    
T  26457069 aaaatataaatatt-gacaaa-tagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtaccggttcacctcactttatga 26456972  T
Q  101 gtgtaccgtagaagttcccatttaattatg 130  Q
    ||||| ||||||||||||| | ||||||||    
T  26456971 gtgta-cgtagaagttcccttataattatg 26456943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 4817174 - 4817075
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||| ||||||| |||||||||| | |||||| |||||||||||||  ||| ||||||||| ||||||||||||||||||||||||||||||| |||||    
T  4817174 aaataactatttattacataaaaa-tgatcgttaatttataaaattataaagtaagagtaccggtacacctcattttgtgagtgtaccgtagaaattccc 4817076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 37127919 - 37127807
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    ||||||||||||||  | ||||||| |||||| |||||||||||| |||||| ||||||||||||| ||||  |||||||  |||||||||||||| |||    
T  37127919 aaaatataaatatt--aaaaaatagttatttattacataaaaaatgatcgttaatttataaaattatgaag-cagagtactggtacacctcattttatga 37127823  T
Q  101 gtgtaccgtagaagtt 116  Q
    ||||||||||||||||    
T  37127822 gtgtaccgtagaagtt 37127807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 51344663 - 51344778
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    ||||||||||| ||||||||| |||||||||| |||||||||||| |||||| ||| ||||||||| |||| | ||||||| |||||||| | ||||| |    
T  51344663 aaaatataaat-tttgacaaa-tagctatttattacataaaaaatgatcgttaatt-ataaaattatgaagcaggagtaccggtacaccttactttgtaa 51344759  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||    
T  51344760 gtgtaccgtagaagttccc 51344778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 48825515 - 48825425
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcat 93  Q
    |||||||||||||| |||||| || |||||||||||||||||||| |||||| |||||||||||||||| | ||||||||| |||||||||||    
T  48825515 aaaatataaatatt-gacaaa-taactatttactacataaaaaatgatcgttaatttataaaattaagatgcaagagtaccggtacacctcat 48825425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 44522298 - 44522397
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| |||||| | |||||||||| |||||| | ||||||||||| |||||||||||| | ||||||||||||||||||||||||  ||||| |||||    
T  44522298 aaatagttatttatttcataaaaaatgatcgttaaattataaaattatgaagaaagagtatcggtacacctcattttgtgagtgtactatagaaattccc 44522397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 13756405 - 13756324
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctc-attttgtga 100  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||| || |||||||  |||||||| |||||||||    
T  13756405 aaatagttatttactacataaaaaatgatcgttcatttataaaattaagaataaggagtaccgatacacctcaattttgtga 13756324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 119
Target Start/End: Complemental strand, 50412162 - 50412071
Alignment:
Q  27 tatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| | |||||||||| ||| || ||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||| || |||||    
T  50412162 tatttaattcataaaaaat-atcattaatttataaaattatgaagaaagagtaccgatacacctcattttgtgagtgtaccgtataaattccc 50412071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 43745462 - 43745341
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| |||||| ||||||||||||  || || ||||||||||||| |||| |  |||||| |||||||||| ||||| |    
T  43745462 aaaatataaatatt-gacaaa-tagttatttattacataaaaaatggtctttaatttataaaattatgaagcagaagtaccggtacacctcactttgtaa 43745365  T
Q  101 gtgtaccgtagaagttcccattta 124  Q
     |||||||||||||||| ||||||    
T  43745364 atgtaccgtagaagttcacattta 43745341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 90
Target Start/End: Complemental strand, 14653881 - 14653811
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacct 90  Q
    ||||||||||||| ||||||||||||||||||| |||| |||||||| |||| ||||||||| ||||||||    
T  14653881 aaatagctatttattacataaaaaattatcgttaatttctaaaattatgaagcaagagtaccggtacacct 14653811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 27045023 - 27045097
Alignment:
Q  42 aaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagtt 116  Q
    |||| |||||| ||||||||||||| | |||| ||||||| || |||||||||||||||||||||||||||||||    
T  27045023 aaatgatcgttaatttataaaattatgtagaaggagtaccggtgcacctcattttgtgagtgtaccgtagaagtt 27045097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 40474126 - 40474240
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    ||||||||||| ||||||||| ||| |||||| |||||||||||| |||| | ||| ||||||||| |||| | ||||||| |||||||||| ||| |||    
T  40474126 aaaatataaat-tttgacaaa-tagttatttattacataaaaaatgatcgctaatt-ataaaattatgaagcaggagtaccggtacacctcactttatga 40474222  T
Q  101 gtgtaccgtagaagttcc 118  Q
    ||||||| ||||||||||    
T  40474223 gtgtaccatagaagttcc 40474240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 25834544 - 25834636
Alignment:
Q  27 tatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| |||||||||||| |||||| ||||||  ||||| |||| | ||||||| ||||| |||| ||| ||||||||||||||||||||||    
T  25834544 tatttattacataaaaaatgatcgttaatttatttaattatgaagcaggagtaccggtacatctcactttatgagtgtaccgtagaagttccc 25834636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 35389383 - 35389300
Alignment:
Q  27 tatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgta 110  Q
    |||||| | |||||||||  |||||| ||||||||||||| |||||||||||| | |||||||||||||||| | |||||||||    
T  35389383 tatttatttcataaaaaacgatcgttaatttataaaattatgaagaaagagtatcggtacacctcattttgtaaatgtaccgta 35389300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 32636917 - 32637033
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| || ||||||| |||||  |||||||||||| |||||| |||| | |||||| |||   |||||| | |||||||||| |||||||    
T  32636917 aaaatataaatatt-ga-aaaatagttatttcttacataaaaaatgatcgttaatttgtgaaattatgaaacgagagtatcggtacacctcactttgtga 32637014  T
Q  101 gtgtaccgtagaagttccc 119  Q
    ||||||||||||| |||||    
T  32637015 gtgtaccgtagaaattccc 32637033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 110
Target Start/End: Original strand, 54788626 - 54788712
Alignment:
Q  24 agctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgta 110  Q
    ||||||||| |||||||||||| |||||| |||||| ||||||  ||| | ||||||  |||||||||| |||||||||||||||||    
T  54788626 agctatttattacataaaaaatgatcgttaatttattaaattataaagcaggagtactggtacacctcactttgtgagtgtaccgta 54788712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 29806350 - 29806420
Alignment:
Q  54 atttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcccattta 124  Q
    ||||||| | ||| |||| ||||||||| |||||||||| |||| ||||||||||||||||||||| ||||    
T  29806350 atttatagatttaggaagcaagagtaccggtacacctcaatttgcgagtgtaccgtagaagttccctttta 29806420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 40021370 - 40021486
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| || |||||||||||||  ||||| |||||| |||||| |||| |||||| | ||||  ||||||||  |||| |||| |||||||    
T  40021370 aaaatataaatatt-ga-aaaatagctatttcttacatgaaaaatgatcgttaatttgtaaaatcatgaagcgagagtaccgatacatctcactttgtga 40021467  T
Q  101 gtgtaccgtagaagttccc 119  Q
    | ||||| |||||||||||    
T  40021468 gcgtaccatagaagttccc 40021486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 39253006 - 39252919
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacct 90  Q
    |||||||||||||| |||||| |||||||||| |||||||||||| || ||| ||||||||||||| |||  || |||||| ||||||||    
T  39253006 aaaatataaatatt-gacaaa-tagctatttattacataaaaaataattgttaatttataaaattatgaaataaaagtaccggtacacct 39252919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 45538745 - 45538676
Alignment:
Q  19 aaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacac 88  Q
    |||||||||||||| |||||||||||| |||||| ||||||||||||| |||  | ||||||| ||||||    
T  45538745 aaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaaacaggagtaccggtacac 45538676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 24170222 - 24170331
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| ||||||| ||||||||| |||||||||| | ||| || ||||||||||||| |||| | ||||| |  || |||||| |||||||    
T  24170222 aaaatataaatatt-gacaaaa-agctatttattacataaaaa-taatccttaatttataaaattatgaagcaggagtatcgatatacctcactttgtga 24170318  T
Q  101 gtgtaccgtagaa 113  Q
     ||||||||||||    
T  24170319 atgtaccgtagaa 24170331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 51756209 - 51756096
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| || |||||| | ||||  ||||| |||||| |||||| ||||||||||||| ||||  | ||||||  ||||||||| ||| | |    
T  51756209 aaaatataaatatt-ga-aaaataacaatttcttacatgaaaaatgatcgttaatttataaaattatgaagtgaaagtaccgatacacctcactttataa 51756112  T
Q  101 gtgtaccgtagaagtt 116  Q
    ||||||||||||||||    
T  51756111 gtgtaccgtagaagtt 51756096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 10279121 - 10279045
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagta 79  Q
    |||||||||||||| |||| | || ||||||| |||||||||||| |||||| ||||||||||||| |||| |||||||    
T  10279121 aaaatataaatatt-gacaga-taactatttattacataaaaaataatcgttaatttataaaattatgaagtaagagta 10279045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 48795505 - 48795439
Alignment:
Q  54 atttataaaattaagaagaaagagtaccagtacacctcattttgtgag-tgtaccgtagaagttccc 119  Q
    ||||||||| ||| | || ||||||||| |||||||||| |||||||| ||||||||||||||||||    
T  48795505 atttataaatttatggagtaagagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 48795439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 52082122 - 52082045
Alignment:
Q  40 aaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttc 117  Q
    |||||| || ||||||||||||| ||  |||| ||||||||| |||||||| | |||| | |||||||||||||||||    
T  52082122 aaaaataatagttcatttataaatttttgaagtaagagtaccggtacaccttaatttgcgggtgtaccgtagaagttc 52082045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 9252187 - 9252259
Alignment:
Q  47 atcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| ||||||| |  || |||| ||||||||| |||||||||| |||  |||||||||||||||||||||    
T  9252187 atcgttaatttatagatatatgaagcaagagtaccggtacacctcaatttacgagtgtaccgtagaagttccc 9252259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 33006610 - 33006650
Alignment:
Q  24 agctatttactacataaaaaattatcgttcatttataaaat 64  Q
    ||||||||| ||||||||||||||||||| |||||||||||    
T  33006610 agctatttattacataaaaaattatcgttaatttataaaat 33006650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 35375577 - 35375509
Alignment:
Q  54 atttataaaattaagaagaaagagtaccagtacacctcattttgtgag-tgtaccgtagaagttcccat 121  Q
    ||||||||| ||| |||  |||||||||  ||||||||| |||||||| ||||||||||||||||||||    
T  35375577 atttataaatttatgaatcaagagtaccgatacacctcaatttgtgaggtgtaccgtagaagttcccat 35375509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 119
Target Start/End: Original strand, 5529054 - 5529100
Alignment:
Q  73 aagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||||||| ||||||||||||||  |||||||||||||||| ||||    
T  5529054 aagagtaccggtacacctcattttaagagtgtaccgtagaagctccc 5529100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 11140606 - 11140660
Alignment:
Q  74 agagtaccagtacacctcattttgtgagtgtaccgtagaagttcccatttaatta 128  Q
    |||||||| |||||||| | |||| | |||||||||||||||||||| |||||||    
T  11140606 agagtaccggtacaccttaatttgcgggtgtaccgtagaagttcccaattaatta 11140660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 32121944 - 32121898
Alignment:
Q  75 gagtaccagtacacctcattttgtgag-tgtaccgtagaagttccca 120  Q
    ||||||| |||||||||| |||||||| |||||||||||||||||||    
T  32121944 gagtaccggtacacctcactttgtgaggtgtaccgtagaagttccca 32121898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 39678414 - 39678460
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaatta 66  Q
    ||||||||||||| | |||||||||| |||||| |||||||||||||    
T  39678414 aaatagctatttatttcataaaaaatgatcgttaatttataaaatta 39678460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 40784557 - 40784491
Alignment:
Q  56 ttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcccatt 122  Q
    ||||||||||| |||| || | ||||  |||| |||||||| ||||||||| |||||||||||||||    
T  40784557 ttataaaattatgaagcaaaaataccgatacatctcattttatgagtgtactgtagaagttcccatt 40784491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 8966276 - 8966337
Alignment:
Q  58 ataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||| ||| |||| | ||||||| |||||||| | ||| ||||||||||||||||||||||    
T  8966276 ataaatttaggaagcaggagtaccggtacaccttaatttatgagtgtaccgtagaagttccc 8966337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 19547851 - 19547896
Alignment:
Q  75 gagtaccagtacacctcattttgtgagtgtaccgtagaagttccca 120  Q
    ||||||| |||||||| | |||||| ||||||||||||||||||||    
T  19547851 gagtaccggtacaccttaatttgtgggtgtaccgtagaagttccca 19547896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 29491932 - 29491977
Alignment:
Q  21 aatagctatttactacataaaaaattatcgttcatttataaaatta 66  Q
    |||||||||||| || ||||||||| |||||| |||||||||||||    
T  29491932 aatagctatttattatataaaaaatgatcgttaatttataaaatta 29491977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 29698367 - 29698322
Alignment:
Q  75 gagtaccagtacacctcattttgtgag-tgtaccgtagaagttccc 119  Q
    ||||||| |||||||||| |||||||| ||||||||||||||||||    
T  29698367 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 29698322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 40784641 - 40784578
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaatta 66  Q
    |||||||||||||| |||||| || ||||||| |||||||||||| |||||| | |||||||||||    
T  40784641 aaaatataaatatt-gacaaa-taactatttattacataaaaaatgatcgttaacttataaaatta 40784578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 41282646 - 41282583
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaatta 66  Q
    ||||||||||| ||||||||| || ||||||| |||||||||||| || ||| |||||||||||||    
T  41282646 aaaatataaat-tttgacaaa-taactatttattacataaaaaatgattgttaatttataaaatta 41282583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 13867139 - 13867063
Alignment:
Q  41 aaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgag-tgtaccgtagaagtt 116  Q
    ||||| || ||| ||||||||| ||| | ||||||| ||||| |||| |||| |||||||| |||||||||||||||    
T  13867139 aaaatgattgttaatttataaatttatggagaaagaataccaatacagctcaatttgtgaggtgtaccgtagaagtt 13867063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 125
Target Start/End: Complemental strand, 14998193 - 14998141
Alignment:
Q  74 agagtaccagtacacctcattttgtgag-tgtaccgtagaagttcccatttaa 125  Q
    ||||||||  |||||| || |||||||| ||||||||||||||||||||||||    
T  14998193 agagtaccgatacaccacaatttgtgaggtgtaccgtagaagttcccatttaa 14998141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 29815469 - 29815537
Alignment:
Q  54 atttataaaattaagaagaaagagtaccagtacacctcattttgtgag-tgtaccgtagaagttcccat 121  Q
    ||||||||| ||| |||| | ||| | | |||||||||| |||||||| ||||||||||||||||||||    
T  29815469 atttataaatttatgaagcaggagcatcggtacacctcaatttgtgaggtgtaccgtagaagttcccat 29815537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 36099476 - 36099568
Alignment:
Q  24 agctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagtt 116  Q
    ||||||||| |||||||||||| |||||| ||| ||||||||| |||| |  |||| |  || ||| || |||||||||||| | ||||||||    
T  36099476 agctatttattacataaaaaatgatcgttaattcataaaattatgaagcagaagtatctttataccacactttgtgagtgtaacttagaagtt 36099568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 5e-40; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 42597589 - 42597473
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||  |||||| ||||||||||||||||||||    
T  42597589 aaaatataaatatt-gacaaa-tagctatttactacataaaaaataatcgttcatttataaaattaagaag-cagagtatcagtacacctcattttgtga 42597493  T
Q  101 gtgtaccgtagaagttccca 120  Q
    ||||||||||||||||||||    
T  42597492 gtgtaccgtagaagttccca 42597473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 2851988 - 2852104
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||||||| |||||||||||| ||||||||||||||||||||||||| | |||||||  |||||||||||||||||    
T  2851988 aaaatataaatatt-gacaaa-tagctatttaatacataaaaaatgatcgttcatttataaaattaagaagcatgagtaccgatacacctcattttgtga 2852085  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||    
T  2852086 gtgtaccgtagaagttccc 2852104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 9604547 - 9604433
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||||||| |||||||||||| |||||||||||||| |||||||||| | ||||||| ||||||||||||||||||    
T  9604547 aaaatataaatatt-gacaaa-tagctatttaatacataaaaaatgatcgttcatttatataattaagaagtaggagtaccggtacacctcattttgtga 9604450  T
Q  101 gtgtaccgtagaagttc 117  Q
    |||||||||||||||||    
T  9604449 gtgtaccgtagaagttc 9604433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 13127288 - 13127391
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| |||||| | ||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  13127288 aaatagttatttatttcataaaaaattatcgttaatttataaaattatgaagaaagagtaccggtacacctcattttgtgaatgtaccgtagaagttccc 13127387  T
Q  120 attt 123  Q
    ||||    
T  13127388 attt 13127391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 40803611 - 40803724
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  40803611 aaaatataaatatt-gacaaa-tagttatttactacataaaaaatgatcgttcatttataaaattaagaagcaggagtaccggtacacctcattttgtga 40803708  T
Q  101 gtgtaccgtagaagtt 116  Q
    ||| ||||||||||||    
T  40803709 gtgcaccgtagaagtt 40803724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 14434934 - 14434817
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||  | |||||||  |||||||||||||||||    
T  14434934 aaaatataaatatt-gacaaa-tagctatttactacatataaaatgatcgttcatttataaaattaagaaacaggagtaccgatacacctcattttgtga 14434837  T
Q  101 gtgtaccgtagaagttccca 120  Q
    |||||| |||||||||||||    
T  14434836 gtgtacagtagaagttccca 14434817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 35370497 - 35370410
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtacc 107  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  35370497 aaatagctatttactacataaaaaatgatcgttcatttataaaattaagaagcaagagtaccggtacacctcattttgtgagtttacc 35370410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 28318463 - 28318348
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||||||||||| |||||||||||| ||||||||||||||||||||| | |||||||  ||||||||||||| | |    
T  28318463 aaaatataaatatt-gacaaa-tagctatttactacgtaaaaaattatcattcatttataaaattaagaagcaggagtaccgatacacctcattttataa 28318366  T
Q  101 gtgtaccgtagaagttcc 118  Q
    ||||||||||||||||||    
T  28318365 gtgtaccgtagaagttcc 28318348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 9910138 - 9910042
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagtt 116  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||| ||||| ||||| | ||||||||||||||||||||||||| ||||||||    
T  9910138 aaatagctatttactacataaaaaatgatcgttcatttatagaattaaaaagaaggagtatcggtacacctcattttgtgagtgtaccatagaagtt 9910042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 6260308 - 6260424
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||||||| |||||||||||  || ||| ||||||||||||| |||| ||||||||| |||||||||||||| |||    
T  6260308 aaaatataaatatt-gacaaa-tagctatttattacataaaaaaagatagtttatttataaaattatgaaggaagagtaccggtacacctcattttatga 6260405  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||    
T  6260406 gtgtaccgtagaagttccc 6260424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 33678448 - 33678564
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||  ||||||||||||||||||| ||| ||||||||||||||||||||| | |||||||  |||||||||||||||||    
T  33678448 aaaatataaatatt-gacaaa-taattatttactacataaaaaatgatcattcatttataaaattaagaagcaggagtaccgatacacctcattttgtga 33678545  T
Q  101 gtgtaccgtagaagttccc 119  Q
    ||||||| |||||||||||    
T  33678546 gtgtaccatagaagttccc 33678564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 33210684 - 33210773
Alignment:
Q  27 tatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagtt 116  Q
    |||||| | ||||||||||||||||| ||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  33210684 tatttatttcataaaaaattatcgttaatttataaaattatgaagaaagggtaccggtacacctcattttgtgagtgtaccgtagaagtt 33210773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 3426080 - 3426183
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| |||||| ||||||||||||||||||| ||||||||||||| |||| ||||||| | ||||||||||||||||||    
T  3426080 aaaatataaatatt-gacaaa-tagttatttattacataaaaaattatcgttaatttataaaattatgaagcaagagtatcggtacacctcattttgtga 3426177  T
Q  101 gtgtac 106  Q
    ||||||    
T  3426178 gtgtac 3426183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 29960174 - 29960273
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| |||||| | |||||||||  |||||| ||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||| ||||||||    
T  29960174 aaatagttatttatttcataaaaaacgatcgttaatttataaaattatgaagaaagagtaccggtacacctcattttatgagtgtaccgtaaaagttccc 29960273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 5360016 - 5360119
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||| ||||| ||||||||||||||||||| ||||||||||||| |||| | |||||||  |||||||||||||||||    
T  5360016 aaaatataaatatt-gacaaa-tagcaatttattacataaaaaattatcgttaatttataaaattatgaagcaggagtaccgatacacctcattttgtga 5360113  T
Q  101 gtgtac 106  Q
    ||||||    
T  5360114 gtgtac 5360119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 479790 - 479676
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| || ||||||| |||||  ||||| |||||| |||||| |||| |||||||| ||||  ||||||||||||||||||| |||||||    
T  479790 aaaatataaatatt-ga-aaaatagttatttcttacatgaaaaatgatcgttaatttgtaaaattatgaagcgagagtaccagtacacctcactttgtga 479693  T
Q  101 gtgtaccgtagaagttc 117  Q
    |||||||||||||||||    
T  479692 gtgtaccgtagaagttc 479676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 108
Target Start/End: Complemental strand, 30753546 - 30753458
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccg 108  Q
    ||||| ||||||| |||||||||||| |||||| |||||||||||||  ||| ||||||||| ||||||||||||||||||||||||||    
T  30753546 aaataactatttattacataaaaaatgatcgttaatttataaaattataaagtaagagtaccggtacacctcattttgtgagtgtaccg 30753458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 42486705 - 42486605
Alignment:
Q  19 aaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcc 118  Q
    |||||| ||||||| |||||||||||| ||| || ||||||||||||| |||| | ||||||| |||||||||| |||||||||||||||||||| ||||    
T  42486705 aaaataactatttattacataaaaaatgatctttaatttataaaattatgaagtatgagtaccggtacacctcactttgtgagtgtaccgtagaaattcc 42486606  T
Q  119 c 119  Q
    |    
T  42486605 c 42486605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 39816584 - 39816506
Alignment:
Q  40 aaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcc 118  Q
    |||||| |||||| ||||||||||||| |||| ||||||||| |||||||||| |||||||||||||||||||||||||    
T  39816584 aaaaatgatcgttaatttataaaattatgaagcaagagtaccggtacacctcactttgtgagtgtaccgtagaagttcc 39816506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 9913304 - 9913198
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| ||||||||||||||||| | || |||||||||||||||||||||| | ||||||| |||||||||||||| |||    
T  9913304 aaaatataaatatt-gacaaa-tagttatttactacataaaaa-tgatagttcatttataaaattaagaagcaggagtaccggtacacctcattttatga 9913208  T
Q  101 gtgtaccgta 110  Q
    ||||| ||||    
T  9913207 gtgtatcgta 9913198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 702292 - 702355
Alignment:
Q  55 tttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcc 118  Q
    |||||||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  702292 tttataaaattatgaagcaagagtaccggtacacctcattttgtgagtgtaccgtagaagttcc 702355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 13119090 - 13119202
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| || |||||||||||||| || ||||||| | |||||| ||||||||||||| |||| | ||||||| |||||||||| ||||| |    
T  13119090 aaaatataaatatt-ga-aaaatagctatttattatataaaaa-tgatcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtaa 13119186  T
Q  101 gtgtaccgtagaagtt 116  Q
    ||||||||||||||||    
T  13119187 gtgtaccgtagaagtt 13119202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 34259830 - 34259943
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| |||||| |||||||||||| |||||| ||||||||||||| |||| | ||||||| ||| |||||| ||||| |    
T  34259830 aaaatataaatatt-gacaaa-tagttatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtaccggtagacctcactttgtta 34259927  T
Q  101 gtgtaccgtagaagtt 116  Q
    || |||||||||||||    
T  34259928 gtataccgtagaagtt 34259943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 36428004 - 36427905
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| |||||| | || ||||||| |||||| |||||||||||||   || ||||||||| |||||||||| ||||||||||||||||||||||||||    
T  36428004 aaatagttatttatttcacaaaaaatgatcgttaatttataaaattattgagcaagagtaccggtacacctcactttgtgagtgtaccgtagaagttccc 36427905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 38 - 116
Target Start/End: Original strand, 9630387 - 9630465
Alignment:
Q  38 taaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagtt 116  Q
    |||||||| |||||| ||||||||||||| |||||||||||| || ||||||| |||||| ||||||||||||||||||    
T  9630387 taaaaaatgatcgttaatttataaaattatgaagaaagagtatcaatacaccttattttgagagtgtaccgtagaagtt 9630465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 12334598 - 12334710
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||||||| |||||||||||| |||||| ||||||||| ||    || ||||||||||||||||| ||  ||||||    
T  12334598 aaaatataaatatt-gacaaa-tagctatttattacataaaaaatgatcgttaatttataaactt----agcaagagtaccagtacaccccaccttgtga 12334691  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||| ||||||||||||    
T  12334692 gtgtactgtagaagttccc 12334710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 40563193 - 40563116
Alignment:
Q  41 aaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcc 118  Q
    ||||| |||||| ||||||||||||| |||| ||||||| | |||||||||||||| |||||||||||||||||||||    
T  40563193 aaaatgatcgttaatttataaaattatgaagcaagagtatcggtacacctcattttatgagtgtaccgtagaagttcc 40563116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 8258685 - 8258753
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaag 71  Q
    |||||||||||||| |||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  8258685 aaaatataaatatt-gacaaa-tagctatttactacataaataatgatcgttcatttataaaattaagaag 8258753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 71
Target Start/End: Complemental strand, 3024250 - 3024199
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaag 71  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  3024250 aaataactatttattacataaaaaattatcgttcatttataaaattaagaag 3024199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 16496092 - 16496174
Alignment:
Q  37 ataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||||||| ||||| |||||| |||||| ||||||||||||| | |||| |||||||| ||| |||||||||||| |||||    
T  16496092 ataaaaaattgtcgttaatttattaaattatgaagaaagagtactaatacatctcattttatgaatgtaccgtagaaattccc 16496174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 4616989 - 4617111
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| || ||||||| |||||  ||||| |||||| |||||| |||| |||||| | ||||  |||||| | ||||| |||| |||||||    
T  4616989 aaaatataaatatt-ga-aaaatagttattttttacatgaaaaatgatcgttaatttgtaaaatcatgaagcgagagtatcggtacatctcactttgtga 4617086  T
Q  101 gtgtaccgtagaagttcccatttaa 125  Q
    |||||||||| |||||||| |||||    
T  4617087 gtgtaccgtaaaagttcccctttaa 4617111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 27980065 - 27980181
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||| ||| |||||||||| | |||||| ||||||||||||| |||  |||||||||  |||| |||| |||||      
T  27980065 aaaatataaatatt-gacaaa-tagctaattattacataaaaa-tgatcgttaatttataaaattatgaaacaagagtaccgctacatctcactttgtag 27980161  T
Q  101 gtgtaccgtagaagttccca 120  Q
    || |||||||||||||||||    
T  27980162 gtttaccgtagaagttccca 27980181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 124
Target Start/End: Original strand, 31588562 - 31588646
Alignment:
Q  41 aaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgag-tgtaccgtagaagttcccattta 124  Q
    ||||| ||| || ||||||||| ||| |||  || |||||| |||||||||| |||||||| |||||||||||||||||||||||    
T  31588562 aaaatgatcattaatttataaatttatgaaacaaaagtaccggtacacctcaatttgtgaggtgtaccgtagaagttcccattta 31588646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 4039535 - 4039469
Alignment:
Q  54 atttataaaattaagaagaaagagtaccagtacacctcattttgtgag-tgtaccgtagaagttccc 119  Q
    ||||||||| ||| |||| ||||||||| |||||||| | |||||||| ||||||||||||||||||    
T  4039535 atttataaatttatgaagtaagagtaccggtacaccttaatttgtgaggtgtaccgtagaagttccc 4039469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 121
Target Start/End: Complemental strand, 5512727 - 5512680
Alignment:
Q  75 gagtaccagtacacctcattttgtgag-tgtaccgtagaagttcccat 121  Q
    ||||||| |||||||||| |||||||| ||||||||||||||||||||    
T  5512727 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagttcccat 5512680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 120
Target Start/End: Complemental strand, 30753463 - 30753420
Alignment:
Q  77 gtaccagtacacctcattttgtgagtgtaccgtagaagttccca 120  Q
    ||||| ||||| ||||||||||||||||||||||||| ||||||    
T  30753463 gtaccggtacatctcattttgtgagtgtaccgtagaaattccca 30753420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 702209 - 702272
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaatta 66  Q
    |||||||||||||| |||||| ||| |||||| |||||||||||| |||||| | |||||||||||    
T  702209 aaaatataaatatt-gacaaa-tagttatttattacataaaaaatgatcgttaacttataaaatta 702272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 4429781 - 4429826
Alignment:
Q  75 gagtaccagtacacctcattttgtgag-tgtaccgtagaagttccc 119  Q
    |||||||| ||||||||| |||||||| ||||||||||||||||||    
T  4429781 gagtaccaatacacctcaatttgtgaggtgtaccgtagaagttccc 4429826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 34302971 - 34303056
Alignment:
Q  36 cataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcccat 121  Q
    ||||||||||||| ||| |||||||||| | | |||  |||||||| |||||||  | ||||   |||||||||||||||||||||    
T  34302971 cataaaaaattatagttaatttataaaaattataagtgagagtaccggtacaccgtaatttgcaggtgtaccgtagaagttcccat 34303056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 119
Target Start/End: Complemental strand, 39939078 - 39939033
Alignment:
Q  75 gagtaccagtacacctcattttgtgag-tgtaccgtagaagttccc 119  Q
    ||||||| |||||||||| |||||||| ||||||||||||||||||    
T  39939078 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 39939033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 119
Target Start/End: Complemental strand, 40524128 - 40524084
Alignment:
Q  76 agtaccagtacacctcattttgtgag-tgtaccgtagaagttccc 119  Q
    |||||||||||||| || |||||||| ||||||||||||||||||    
T  40524128 agtaccagtacaccccaatttgtgaggtgtaccgtagaagttccc 40524084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 27990652 - 27990536
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  27990652 aaaatataaatatt-gacaaa-tagctatttactacataaaaaatgatcgttcatttataaaattaagaagcaggagtaccggtacacctcattttgtga 27990555  T
Q  101 gtgtaccgtagaagttccc 119  Q
    ||||| |||||||||||||    
T  27990554 gtgtatcgtagaagttccc 27990536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 1857094 - 1857211
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||  | ||||||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  1857094 aaaatataaatatt-gacaaa-tagctatttactacataaaaaacgaccgttcatttataaaattaagaagcaggagtaccggtacacctcattttgtga 1857191  T
Q  101 gtgtaccgtagaagttccca 120  Q
    ||||||||||||||||||||    
T  1857192 gtgtaccgtagaagttccca 1857211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 28835904 - 28835788
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||||||| |||||||||||||||    
T  28835904 aaaatataaatatt-gacaaa-tagctatttactacataaaaaacgatcgttcatttataaaattaagaagcaggagtaccagttcacctcattttgtga 28835807  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||| ||||||||    
T  28835806 gtgtaccgtaaaagttccc 28835788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 126868 - 126984
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| || |||||||||||||||||||| ||||||||||||||||||||||||| | |||||||  ||||||||||||| |||    
T  126868 aaaatataaatatt-gacaaa-taactatttactacataaaaaatgatcgttcatttataaaattaagaagcaggagtaccgatacacctcattttatga 126965  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||    
T  126966 gtgtaccgtagaagttccc 126984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 26118043 - 26118159
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||| |||||| |||||||||||||||| | ||||||||| ||||||||||| ||||||    
T  26118043 aaaatataaatatt-gacaaa-tagttatttactacataaaaaatgatcgttgatttataaaattaagatgcaagagtaccggtacacctcatcttgtga 26118140  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||    
T  26118141 gtgtaccgtagaagttccc 26118159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 24535598 - 24535491
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||||| |||||||||||||| ||||||||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  24535598 aaaatataaatatt-gacaaa-tagctattaactacataaaaaatgatcgttcatttataaaattaagaagcaggagtaccggtacacctcattttgtga 24535501  T
Q  101 gtgtaccgta 110  Q
    ||||||||||    
T  24535500 gtgtaccgta 24535491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 45692721 - 45692621
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| |||||  |||||||||||||||||||||    
T  45692721 aaatagctatttattacataaaaaattatcgttcatttataaaattaagaagcaagagtatcggtacaccttattttacgagtgtaccgtagaagttccc 45692622  T
Q  120 a 120  Q
    |    
T  45692621 a 45692621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 4720761 - 4720878
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||| | ||||||||||||||||||||||||| | |||||||  ||||||||||||| |||    
T  4720761 aaaatataaatatt-gacaaa-tagctatttactacataaaaattgatcgttcatttataaaattaagaagcaggagtaccgatacacctcattttatga 4720858  T
Q  101 gtgtaccgtagaagttccca 120  Q
    |||||||||| |||||||||    
T  4720859 gtgtaccgtataagttccca 4720878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 34829030 - 34829129
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||| | ||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  34829030 aaatagctatttacaacataaaaaattatcgttaatttataaaattaagatgcaagagtaccggtacacctcatcttgtgagtgtaccgtagaaattccc 34829129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 42177441 - 42177340
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| |||||| | |||||||||| |||||| ||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  42177441 aaatagttatttatttcataaaaaatgatcgttaatttataaaattatgaagaaagagtaccgatacacctcattttgtgagtgtaccgtagaagttccc 42177342  T
Q  120 at 121  Q
    ||    
T  42177341 at 42177340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 8256732 - 8256845
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||| ||| ||||||||||||||||||||| | |||||||  |||||||||||||||||    
T  8256732 aaaatataaatatt-gacaaa-tagttatttactacataaaaaatgatcattcatttataaaattaagaaggaggagtaccgatacacctcattttgtga 8256829  T
Q  101 gtgtaccgtagaagtt 116  Q
    |||||||||| |||||    
T  8256830 gtgtaccgtaaaagtt 8256845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 8270150 - 8270263
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||| ||| ||||||||||||||||||||| | |||||||  |||||||||||||||||    
T  8270150 aaaatataaatatt-gacaaa-tagttatttactacataaaaaatgatcattcatttataaaattaagaaggaggagtaccgatacacctcattttgtga 8270247  T
Q  101 gtgtaccgtagaagtt 116  Q
    |||||||||| |||||    
T  8270248 gtgtaccgtaaaagtt 8270263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 29364474 - 29364587
Alignment:
Q  3 aatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagt 102  Q
    |||||||||||| |||||| ||| ||||||||||||||||||| |||||||||| |||||||||| ||| | ||||||| ||||||||||||||||||||    
T  29364474 aatataaatatt-gacaaa-tagttatttactacataaaaaatgatcgttcattcataaaattaaaaagcaggagtaccggtacacctcattttgtgagt 29364571  T
Q  103 gtaccgtagaagttcc 118  Q
    |||| |||||||||||    
T  29364572 gtacagtagaagttcc 29364587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 27761516 - 27761400
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||||||| ||||||||||||||||||| ||| ||||||||| |||| |||||||||  ||||||||| |||||||    
T  27761516 aaaatataaatatt-gacaaa-tagctatttattacataaaaaattatcgttaattcataaaattatgaagcaagagtaccgatacacctcactttgtga 27761419  T
Q  101 gtgtaccgtagaagttccc 119  Q
    ||||||||||||| |||||    
T  27761418 gtgtaccgtagaaattccc 27761400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 53936606 - 53936508
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcc 118  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||| | |||||||||  |||||||||| || |||||||||||||||||||||    
T  53936606 aaatagctatttactacataaaaaatgatcgttaatttataaaattaagatgcaagagtaccgatacacctcatcttatgagtgtaccgtagaagttcc 53936508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 24980057 - 24979944
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||||||| ||||||||||||||||||| |||||||||| || |||| || |||||| |||||||| |||||||||    
T  24980057 aaaatataaatatt-gacaaa-tagctatttattacataaaaaattatcgttaatttataaaa-tatgaagcaatagtaccggtacaccttattttgtga 24979961  T
Q  101 gtgtaccgtagaagttc 117  Q
    |||||||||||||||||    
T  24979960 gtgtaccgtagaagttc 24979944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 22 - 119
Target Start/End: Complemental strand, 30348260 - 30348163
Alignment:
Q  22 atagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||| |||||| | |||||||||| |||||| ||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||| |||||||    
T  30348260 atagttatttatttcataaaaaatgatcgttaatttataaaattatgaagaaagagtaccggtacacctcattttgtgattgtaccgtagtagttccc 30348163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 119
Target Start/End: Original strand, 38008446 - 38008560
Alignment:
Q  3 aatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagt 102  Q
    |||||||||||| |||||| ||| |||||| | |||||||||| |||||| ||||||||||||| |||||||||||| |  |||||||||||||||||||    
T  38008446 aatataaatatt-gacaaa-tagttatttatttcataaaaaatgatcgttaatttataaaattatgaagaaagagtatcgatacacctcattttgtgagt 38008543  T
Q  103 gtaccgtagaagttccc 119  Q
    | |||||||||||||||    
T  38008544 gcaccgtagaagttccc 38008560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 52607684 - 52607571
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| ||||||||| ||||||||| || ||| |||||||||||||||| | ||||||||| ||||||||||| ||||||    
T  52607684 aaaatataaatatt-gacaaa-tagttatttactagataaaaaataattgttaatttataaaattaagatgcaagagtaccggtacacctcatcttgtga 52607587  T
Q  101 gtgtaccgtagaagtt 116  Q
     |||||||||||||||    
T  52607586 atgtaccgtagaagtt 52607571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 5970815 - 5970700
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||||||| |||||||||||| ||  || ||||||||||||| |||| ||||||||| ||||| |||| | |||||    
T  5970815 aaaatataaatatt-gacaaa-tagctatttattacataaaaaatgattattaatttataaaattatgaagcaagagtaccggtacatctcactatgtga 5970718  T
Q  101 gtgtaccgtagaagttcc 118  Q
    ||||||||||||||||||    
T  5970717 gtgtaccgtagaagttcc 5970700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 36631134 - 36631030
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| |||||| | |||||||||| |||||| ||||||||||||| ||| ||| ||||||  ||||||||||||||||||||||||||||||||||||    
T  36631134 aaatagttatttatttcataaaaaatgatcgttaatttataaaattatgaa-aaatagtaccgttacacctcattttgtgagtgtaccgtagaagttccc 36631036  T
Q  120 atttaa 125  Q
     |||||    
T  36631035 ctttaa 36631030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 50607992 - 50608089
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttc 117  Q
    |||||| |||||| | |||||||||| || ||| ||||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||||    
T  50607992 aaatagttatttatttcataaaaaatgattgttaatttataaaattatgaagaaagagtattggtacacctcattttgtgagtgtaccgtagaagttc 50608089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 50733165 - 50733261
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagtt 116  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||  | |||||||  |||| || |||||||||||||||||| ||||||    
T  50733165 aaatagctatttactacataaaaaatgatcgttcatttataaaattaaaaaacaggagtaccgatacatcttattttgtgagtgtaccgtggaagtt 50733261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 3763420 - 3763519
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| |||||| | |||||||||| |||||| ||||||||||||| ||||||| ||||||  ||||||| ||||||||||||||| ||||||||||||    
T  3763420 aaatagttatttatttcataaaaaataatcgttaatttataaaattatgaagaaaaagtaccgatacaccttattttgtgagtgtacggtagaagttccc 3763519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 56303128 - 56303251
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    ||||||||||| ||||||||| ||  |||||| ||||||||||||||||||| |||||||||||||  ||| | ||||||| |||||||||| ||| |||    
T  56303128 aaaatataaat-tttgacaaa-taaatatttattacataaaaaattatcgttaatttataaaattataaagcaggagtaccggtacacctcactttatga 56303225  T
Q  101 gtgtaccgtagaagttcccatttaat 126  Q
    ||||||| ||||||||| ||| ||||    
T  56303226 gtgtaccatagaagttctcatataat 56303251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 120
Target Start/End: Original strand, 29582273 - 29582373
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||||||||||| |||| ||||||  ||  || ||||||||||||| |||| || |||||| |||||||||| ||||||||||||||||||||||||||    
T  29582273 aaatagctatttattacacaaaaaagaataatttatttataaaattatgaaggaaaagtaccggtacacctcaatttgtgagtgtaccgtagaagttccc 29582372  T
Q  120 a 120  Q
    |    
T  29582373 a 29582373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 31999033 - 31999128
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagtt 116  Q
    ||||||||||| | ||||||||||||||||||| ||| ||||||||| |||| |||||||||  ||||||||| ||| |||||||||||||||||||    
T  31999033 aaatagctattaattacataaaaaattatcgttaatt-ataaaattatgaagcaagagtaccgatacacctcactttatgagtgtaccgtagaagtt 31999128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 583060 - 583144
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtaca 87  Q
    |||||||||||||| |||||| || |||||||||||||||||||| ||||||||||||||||||||||||| |||||| || |||||    
T  583060 aaaatataaatatt-gacaaa-taactatttactacataaaaaataatcgttcatttataaaattaagaagtaagagtgccggtaca 583144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 43735423 - 43735534
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| || |||||||||| ||||||||| |||||| |||||||||||||||| | ||||||||| ||| ||||||| || |||    
T  43735423 aaaatataaatatt-gacaaa-taactatttactatataaaaaatgatcgttaatttataaaattaagatgcaagagtaccggtatacctcatcttatga 43735520  T
Q  101 -gtgtaccgtagaa 113  Q
     |||||||||||||    
T  43735521 ggtgtaccgtagaa 43735534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 50776062 - 50776181
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||  |||||| | |||||||||| || ||| ||||||||||||| ||| ||| ||||||  ||||||||||||| | |    
T  50776062 aaaatataaatatt-gacaaa-taattatttatttcataaaaaatgattgttaatttataaaattatgaaaaaatagtaccgatacacctcattttataa 50776159  T
Q  101 gtgtaccgtagaagttcccatt 122  Q
    ||||||||||||||||||||||    
T  50776160 gtgtaccgtagaagttcccatt 50776181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 32570695 - 32570778
Alignment:
Q  41 aaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgag-tgtaccgtagaagttcccattt 123  Q
    ||||| |||||| ||||||||| ||| |||| ||||||||| |||||||||| |||||||| ||||||||||||||||||||||    
T  32570695 aaaatgatcgttaatttataaatttatgaagtaagagtaccggtacacctcaatttgtgaggtgtaccgtagaagttcccattt 32570778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 33491277 - 33491160
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| || ||||||| |||||| ||||||||| || |||||| ||||||  ||||| |||| | ||||||| ||||| |||| |||||||    
T  33491277 aaaatataaatatt-ga-aaaatag-tatttattacataaaatatgatcgttaatttatttaattatgaagcaggagtaccggtacatctcactttgtga 33491181  T
Q  101 gtgtaccgtagaagttcccat 121  Q
     ||||||||||||||||||||    
T  33491180 atgtaccgtagaagttcccat 33491160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 23058881 - 23058764
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| || ||||||  |||||  ||||| |||||| |||||| |||| ||||| || ||||  |||||||| ||||| |||| |||||||    
T  23058881 aaaatataaatatt-ga-aaaataattatttcttacatgaaaaatgatcgttaatttgtaaaagtatgaagcgagagtaccggtacatctcactttgtga 23058784  T
Q  101 gtgtaccgtagaagttccca 120  Q
    ||||||||||||||||||||    
T  23058783 gtgtaccgtagaagttccca 23058764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 9356480 - 9356379
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||||||||||| |  ||||||||| ||  || ||||||||||||| |||| |  ||||| | |||| |||||||||||||| ||||||||||||||||    
T  9356480 aaatagctatttattttataaaaaatgatttttaatttataaaattatgaagcagaagtactaatacatctcattttgtgagtataccgtagaagttccc 9356381  T
Q  120 at 121  Q
    ||    
T  9356380 at 9356379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 352589 - 352474
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    ||||||||||||||  | ||||||| |||||| || ||||||| | |||||| ||||||||||||| |||  | ||||| | |||||||||| |||||||    
T  352589 aaaatataaatatt--aaaaaatagttatttattatataaaaa-tgatcgttaatttataaaattatgaaacaggagtatcggtacacctcactttgtga 352493  T
Q  101 gtgtaccgtagaagttccc 119  Q
    ||||||||  |||||||||    
T  352492 gtgtaccgcggaagttccc 352474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 107
Target Start/End: Complemental strand, 48647118 - 48647031
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtacc 107  Q
    |||||| |||||| | || ||||||| |||||| ||||||||||||| |||  || ||||||| ||||||||||||| ||||||||||    
T  48647118 aaatagttatttatttcacaaaaaatgatcgttaatttataaaattatgaaacaaaagtaccaatacacctcattttatgagtgtacc 48647031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 118
Target Start/End: Original strand, 54996414 - 54996508
Alignment:
Q  24 agctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcc 118  Q
    ||||||||| |||||||||||| |||||| ||||||||||||| |||  | |||||||  ||||||||| ||| ||| |||||  ||||||||||    
T  54996414 agctatttattacataaaaaatgatcgttaatttataaaattatgaaacaggagtaccgttacacctcactttatgaatgtactatagaagttcc 54996508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 119
Target Start/End: Original strand, 21424469 - 21424548
Alignment:
Q  41 aaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgag-tgtaccgtagaagttccc 119  Q
    ||||| |||||| |||||| || ||| |||| ||||||||| ||||| |||||||||| || ||||||||||||||||||    
T  21424469 aaaataatcgttaatttatcaatttatgaagtaagagtaccggtacatctcattttgttagatgtaccgtagaagttccc 21424548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 32845771 - 32845703
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaag 71  Q
    ||||||||| |||| ||||||| ||||||||| |||||||||||| |||||| ||||||||||||| ||||    
T  32845771 aaaatataactatt-gacaaaa-agctatttattacataaaaaatgatcgttaatttataaaattatgaag 32845703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 43147780 - 43147902
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaa-------gagtaccagtacacctcat 93  Q
    |||||||||||||| |||||| || |||||||||||||||||||| |||||| |||||||||| | |  | ||        ||||||| ||| |||||||    
T  43147780 aaaatataaatatt-gacaaa-taactatttactacataaaaaatgatcgttaatttataaaaattaccaaaattcattgtgagtaccggtatacctcat 43147877  T
Q  94 tttgtgagtgtaccgtagaagttcc 118  Q
     ||||||||||||||||||||||||    
T  43147878 cttgtgagtgtaccgtagaagttcc 43147902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 46663667 - 46663733
Alignment:
Q  54 atttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccca 120  Q
    ||||||| | ||| |||| ||||||||| |||||||||| |||  ||||||||||||||||||||||    
T  46663667 atttatagatttatgaagcaagagtaccggtacacctcaatttacgagtgtaccgtagaagttccca 46663733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 73 - 121
Target Start/End: Complemental strand, 24566414 - 24566365
Alignment:
Q  73 aagagtaccagtacacctcattttgtga-gtgtaccgtagaagttcccat 121  Q
    ||||||||| |||||||||||||||| | |||||||||||||||||||||    
T  24566414 aagagtaccggtacacctcattttgttaggtgtaccgtagaagttcccat 24566365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 123
Target Start/End: Original strand, 28038046 - 28038095
Alignment:
Q  74 agagtaccagtacacctcattttgtgagtgtaccgtagaagttcccattt 123  Q
    |||||||| |||||||| | |||||| |||||||||||||||||||||||    
T  28038046 agagtaccggtacaccttaatttgtgggtgtaccgtagaagttcccattt 28038095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 32289002 - 32288901
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||||||||||| | |||||||||| |||||| || |||||||||| |||| |  ||||||  || |||||| ||| ||| | |||||||||| |||||    
T  32289002 aaatagctatttatttcataaaaaatgatcgttaatatataaaattatgaagcagaagtaccgatatacctcactttatgaatataccgtagaaattccc 32288903  T
Q  120 at 121  Q
    ||    
T  32288902 at 32288901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 5340303 - 5340363
Alignment:
Q  47 atcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtacc 107  Q
    |||||| ||||||||||||| |||| | ||||||| |||||||| | ||||||||||||||    
T  5340303 atcgttaatttataaaattatgaagcaggagtaccggtacaccttactttgtgagtgtacc 5340363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 50383445 - 50383356
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctca 92  Q
    ||||||||||||||  | ||||||| |||||  ||||| |||||| |||||| ||||||||||||| ||||  ||||||||  |||||||||    
T  50383445 aaaatataaatatt--aaaaaatagatatttcttacatgaaaaatgatcgttaatttataaaattatgaagcgagagtaccgatacacctca 50383356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 119
Target Start/End: Complemental strand, 50498208 - 50498144
Alignment:
Q  55 tttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||||||||||  ||| ||||||||| ||| |||||| |||||||| |||| ||||||||||||    
T  50498208 tttataaaattataaagtaagagtaccggtaaacctcaatttgtgagagtacagtagaagttccc 50498144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 119
Target Start/End: Complemental strand, 27950304 - 27950258
Alignment:
Q  74 agagtaccagtacacctcattttgtgag-tgtaccgtagaagttccc 119  Q
    |||||||| |||||||||| |||||||| ||||||||||||||||||    
T  27950304 agagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 27950258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 118
Target Start/End: Complemental strand, 45063316 - 45063238
Alignment:
Q  41 aaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga-gtgtaccgtagaagttcc 118  Q
    ||||| |||||| ||||||||| ||| || | ||||||| |||||||||||||||||| | |||||| ||| |||||||    
T  45063316 aaaataatcgttaatttataaatttatgatgcaagagtatcagtacacctcattttgttaggtgtacagtataagttcc 45063238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 116
Target Start/End: Original strand, 408405 - 408466
Alignment:
Q  55 tttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagtt 116  Q
    |||||| | ||| |||| ||||||||| |||||||||| |||  ||||||||||||||||||    
T  408405 tttatagatttatgaagcaagagtaccggtacacctcaatttacgagtgtaccgtagaagtt 408466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 1605655 - 1605582
Alignment:
Q  55 tttataaaattaagaagaaagagtaccagtacacctcattttgtgag-tgtaccgtagaagttcccatttaatt 127  Q
    |||||||| ||| |||| ||||||| | | || ||||| |||||||| ||||||||||||||||||||| ||||    
T  1605655 tttataaatttatgaagcaagagtatcggcacccctcaatttgtgaggtgtaccgtagaagttcccattaaatt 1605582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 19527085 - 19527130
Alignment:
Q  75 gagtaccagtacacctcattttgtgag-tgtaccgtagaagttccc 119  Q
    ||||||| |||||||||| |||||||| ||||||||||||||||||    
T  19527085 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 19527130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 50498426 - 50498389
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcattt 57  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  50498426 aaatagctatttactacataaaaaataatcgttaattt 50498389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 119
Target Start/End: Complemental strand, 30060594 - 30060530
Alignment:
Q  55 tttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| | ||| |||| ||||||| | |||||||||| |||  |||||||||||||||||||||    
T  30060594 tttatagatttatgaagcaagagtatcggtacacctcaatttacgagtgtaccgtagaagttccc 30060530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 105
Target Start/End: Complemental strand, 56104480 - 56104416
Alignment:
Q  41 aaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgta 105  Q
    ||||| |||||| ||||||||||||| |||   |||||| | |||||||||| ||||||||||||    
T  56104480 aaaatgatcgttaatttataaaattatgaaacgagagtatcggtacacctcactttgtgagtgta 56104416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 33574349 - 33574232
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  33574349 aaaatataaatatt-gacaaa-tagctatttactacataaaaaatgatcgttcatttataaaattaagaagcaggagtaccggtacacctcattttgtga 33574252  T
Q  101 gtgtaccgtagaagttccca 120  Q
    |||||||||| || ||||||    
T  33574251 gtgtaccgtataaattccca 33574232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 33574643 - 33574759
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| || |||||||||||||| |||||||||||| |||||| ||||||||||||| |||| ||||||||| |||||||||| |||||||    
T  33574643 aaaatataaatatt-ga-aaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaagagtaccggtacacctcactttgtga 33574740  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||    
T  33574741 gtgtaccgtagaagttccc 33574759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 33574821 - 33574937
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| || |||||||||||||| |||||||||||| |||||| ||||||||||||| |||| ||||||||| |||||||||| |||||||    
T  33574821 aaaatataaatatt-ga-aaaatagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaagagtaccggtacacctcactttgtga 33574918  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||    
T  33574919 gtgtaccgtagaagttccc 33574937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 2 - 119
Target Start/End: Original strand, 23416788 - 23416903
Alignment:
Q  2 aaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgag 101  Q
    ||||||||||||| |||||| ||||||||||||||| ||||||  ||| ||||||||||||||||||||| | ||||||| |||||||||||||||||||    
T  23416788 aaatataaatatt-gacaaa-tagctatttactacaaaaaaaaagatcattcatttataaaattaagaagcaggagtaccggtacacctcattttgtgag 23416885  T
Q  102 tgtaccgtagaagttccc 119  Q
    ||||||||||||||||||    
T  23416886 tgtaccgtagaagttccc 23416903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 1245127 - 1245214
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtacc 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||||||||||||||||    
T  1245127 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaaggaagagtatcggtacaccttattttgtgagtgtacc 1245214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 242984 - 242880
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||||||||||| ||||||||||| |||||| |||||||||||||||| | ||||||| | ||||||||||| || ||||||||||||||||||||||    
T  242984 aaatagctatttacaacataaaaaatgatcgttaatttataaaattaagatgcaagagtatcggtacacctcatcttatgagtgtaccgtagaagttccc 242885  T
Q  120 attta 124  Q
    |||||    
T  242884 attta 242880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 9687083 - 9687180
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttc 117  Q
    |||||| |||||| | |||||||||| |||||| |||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||    
T  9687083 aaatagttatttatttcataaaaaatgatcgttaatttataaaattaagaagaaagagtatcgatacacctcattttgtgagtgtaccgtagaagttc 9687180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 4509736 - 4509835
Alignment:
Q  19 aaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcc 118  Q
    |||||||||||||| |||||||||||| |||||| ||||||||||||| |||| | ||||||| |||||||||| |||||||||||||||||||||||||    
T  4509736 aaaatagctatttattacataaaaaat-atcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtgagtgtaccgtagaagttcc 4509834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 3141156 - 3141039
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| |||||| |||||||||||||||||||| | |||| |||||||||| | ||||| || |||||||||||||||||    
T  3141156 aaaatataaatatt-gacaaa-tagttatttattacataaaaaattatcgttcgtatatataattaagaagcaggagtatcaatacacctcattttgtga 3141059  T
Q  101 gtgtaccgtagaagttccca 120  Q
    ||||||| ||||||||||||    
T  3141058 gtgtaccatagaagttccca 3141039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 119
Target Start/End: Complemental strand, 8549658 - 8549563
Alignment:
Q  24 agctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||||||| | |||||||||| |||||| ||||||||||||| ||| |||||||| | |||||||||||||||||||||||||||||||||||||    
T  8549658 agctatttatttcataaaaaatgatcgttaatttataaaattatgaaaaaagagtatcggtacacctcattttgtgagtgtaccgtagaagttccc 8549563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 11763269 - 11763174
Alignment:
Q  23 tagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcc 118  Q
    |||||||||| |||||||||||| |||||| ||||||||||||| |||| | ||||||| |||||||||| | |||||||||||||||||||||||    
T  11763269 tagctatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtaccggtacacctcactctgtgagtgtaccgtagaagttcc 11763174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 27 - 119
Target Start/End: Original strand, 9662072 - 9662164
Alignment:
Q  27 tatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||||||||||||||||| ||| || |||||||||||||||| | |||||||||  |||||||||| || ||||||||||||||||||||||    
T  9662072 tatttactacataaaaaatgatcattaatttataaaattaagatgcaagagtaccgatacacctcatcttatgagtgtaccgtagaagttccc 9662164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 14779211 - 14779309
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| |||||| | |||||||||| |||||| ||||||||||||| ||| |||||||||| |||| ||||||||||||||||||| ||||||||||||    
T  14779211 aaatagttatttatttcataaaaaat-atcgttaatttataaaattatgaaaaaagagtaccggtacccctcattttgtgagtgtactgtagaagttccc 14779309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 4576692 - 4576791
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| |||||| | || ||||||| |||||| ||||||||||||| ||| |||||||||| |||||||||||||||||||| |||  |||||||||||    
T  4576692 aaatagttatttatttcacaaaaaataatcgttaatttataaaattatgaaaaaagagtaccggtacacctcattttgtgagtctacaatagaagttccc 4576791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 18772183 - 18772266
Alignment:
Q  36 cataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||||||| |||||| ||||||||||||| |||| | |||||||  ||||| ||| ||||||||||||||||||||||||||    
T  18772183 cataaaaaatgatcgttaatttataaaattatgaagtaggagtaccgatacacttcactttgtgagtgtaccgtagaagttccc 18772266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 22755549 - 22755630
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgag 101  Q
    ||||||||||||| |||| ||||||  |||||| ||||||||||||| |||| ||||||||  |||||||||| ||||||||    
T  22755549 aaatagctatttattacacaaaaaagaatcgtttatttataaaattatgaaggaagagtacgggtacacctcactttgtgag 22755630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 528904 - 528828
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcatttt 96  Q
    |||||| |||||| | || |||||||||||||| |||||||||||||  ||| ||||||||| ||||||||||||||    
T  528904 aaatagttatttatttcacaaaaaattatcgttaatttataaaattataaagtaagagtaccggtacacctcatttt 528828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 23069042 - 23069106
Alignment:
Q  55 tttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||||||||| |||| | ||||||| |||||||||| ||||||||||||||||| ||||||||    
T  23069042 tttataaaattatgaagcaggagtaccggtacacctcactttgtgagtgtaccgtaaaagttccc 23069106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 26958681 - 26958790
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||||||| |||||||||||| ||| || ||||||||||||| |||| | ||||        |||| | |||||||    
T  26958681 aaaatataaatatt-gacaaa-tagctatttattacataaaaaatgatcattaatttataaaattatgaagcatgagt-------gaccttactttgtga 26958771  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||    
T  26958772 gtgtaccgtagaagttccc 26958790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 19474026 - 19474079
Alignment:
Q  68 gaagaaagagtaccagtacacctcattttgtgag-tgtaccgtagaagttccca 120  Q
    |||| ||||||||| |||||||||| |||||||| |||||||||||||||||||    
T  19474026 gaagcaagagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccca 19474079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 21970641 - 21970713
Alignment:
Q  47 atcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| ||||||| | ||| |||| ||||||||| |||||||  | ||| ||||||||||||||||||||||    
T  21970641 atcgttaatttatagatttaggaagtaagagtaccggtacaccagaatttatgagtgtaccgtagaagttccc 21970713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 119
Target Start/End: Complemental strand, 29023683 - 29023619
Alignment:
Q  55 tttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| | ||| |||| ||||||||| |||||||||| |||  |||||||||||||||||||||    
T  29023683 tttatagatttatgaagcaagagtaccggtacacctcaatttacgagtgtaccgtagaagttccc 29023619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 1705967 - 1706022
Alignment:
Q  75 gagtaccagtacacctcattttgtgag-tgtaccgtagaagttcccatttaattat 129  Q
    ||||||| |||||||||| ||| |||| ||||||||||||||||||||||| ||||    
T  1705967 gagtaccggtacacctcaatttatgaggtgtaccgtagaagttcccatttatttat 1706022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 8858024 - 8858075
Alignment:
Q  68 gaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||||||||||  ||||||| |||||| |||||||||| |||||||||||    
T  8858024 gaagaaagagtacaggtacaccacattttatgagtgtaccatagaagttccc 8858075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 121
Target Start/End: Complemental strand, 10887888 - 10887807
Alignment:
Q  41 aaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgag-tgtaccgtagaagttcccat 121  Q
    ||||| |||||| | ||||||| ||  |||| | ||||||| |||||||||| ||| |||| ||||||||||||||||||||    
T  10887888 aaaataatcgttaaattataaatttttgaagtaggagtaccggtacacctcaatttatgaggtgtaccgtagaagttcccat 10887807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 10965985 - 10966030
Alignment:
Q  75 gagtaccagtacacctcattttgtgag-tgtaccgtagaagttccc 119  Q
    ||||||| |||||||||| |||||||| ||||||||||||||||||    
T  10965985 gagtaccggtacacctcaatttgtgaggtgtaccgtagaagttccc 10966030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 119
Target Start/End: Complemental strand, 31644474 - 31644410
Alignment:
Q  55 tttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| | ||| |||| |||||||||  ||||||||| |||  |||||||||||||||||||||    
T  31644474 tttatagatttatgaagcaagagtaccgatacacctcaatttacgagtgtaccgtagaagttccc 31644410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 7e-36; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 118100 - 118214
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||| |||||||||| | ||||||| ||||||||||||||||||    
T  118100 aaaatataaatatt-gacaaa-tagctatttactacataaaaaatgatcgttcatttatagaattaagaagcaggagtaccggtacacctcattttgtga 118197  T
Q  101 gtgtaccgtagaagttc 117  Q
    ||||||| |||||||||    
T  118198 gtgtaccatagaagttc 118214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 7128189 - 7128085
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| | ||||||||||||||||||||||||| |||||||||||    
T  7128189 aaatagctatttactacataaaaaattatcgttcatttatagaattaagaagcaggagtatcggtacacctcattttgtgagtgtaccatagaagttccc 7128090  T
Q  120 attta 124  Q
     ||||    
T  7128089 tttta 7128085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 37676053 - 37675943
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||||||| |||||||||||| |||||||||||||| |||||||||| | ||||||| ||||||||||||||||||    
T  37676053 aaaatataaatatt-gacaaa-tagctatttaatacataaaaaatgatcgttcatttatataattaagaagtaggagtaccggtacacctcattttgtga 37675956  T
Q  101 gtgtaccgtagaa 113  Q
    |||||||||||||    
T  37675955 gtgtaccgtagaa 37675943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 40578986 - 40579102
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |  ||||||  ||||| |||||||||||    
T  40578986 aaaatataaatatt-gacaaa-tagctatttactacataaaaaatgatcgttcatttataaaattaagaagcagaagtaccgatacacttcattttgtga 40579083  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||| ||||||||||    
T  40579084 gtgtaccgcagaagttccc 40579102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 41720539 - 41720655
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||||||||| |||||||||| ||||||||||||||||||||| ||| |  |||||| ||| ||||||||||||||    
T  41720539 aaaatataaatatt-gacaaa-tagctatttactgcataaaaaatgatcgttcatttataaaattaaaaagtagaagtaccggtatacctcattttgtga 41720636  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||    
T  41720637 gtgtaccgtagaagttccc 41720655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 6982901 - 6982786
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| || |||||||||||||||||||| ||||||||||||||||||||||||| || ||||||  ||||||||||||| |||    
T  6982901 aaaatataaatatt-gacaaa-taactatttactacataaaaaatgatcgttcatttataaaattaagaagcaaaagtaccgatacacctcattttatga 6982804  T
Q  101 gtgtaccgtagaagttcc 118  Q
    ||||||| ||||||||||    
T  6982803 gtgtaccatagaagttcc 6982786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 26522082 - 26521980
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||  ||||||||||||||||||    
T  26522082 aaaatataaatatt-gacaaa-tagctatttactacataaaatattattgttcatttataaaattaagaagcaggagtactggtacacctcattttgtga 26521985  T
Q  101 gtgta 105  Q
    |||||    
T  26521984 gtgta 26521980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 10706654 - 10706555
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| |||||| | || ||||||| |||||| ||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  10706654 aaatagttatttatttcacaaaaaatgatcgttaatttataaaattatgaagcaagagtaccagtacacctcactttgtgagtgtaccgtagaagttccc 10706555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 29454259 - 29454142
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| |||||| |||||||||||| |||||| ||||||||||||| |||| | ||||||| |||||||| | |||||||    
T  29454259 aaaatataaatatt-gacaaa-tagttatttattacataaaaaatgatcgttaatttataaaattatgaagcaggagtaccggtacaccttactttgtga 29454162  T
Q  101 gtgtaccgtagaagttccca 120  Q
    ||||||||||||||||||||    
T  29454161 gtgtaccgtagaagttccca 29454142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 38210627 - 38210726
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||| | ||||| | |||||||| |||||  |||||||||||||||||||||    
T  38210627 aaatagttatttattacataaaaaattatcgttcatttataaaattaagaagcaggagtatcggtacaccttattttacgagtgtaccgtagaagttccc 38210726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 20 - 119
Target Start/End: Complemental strand, 44000660 - 44000561
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| |||||| | |||||||||| |||||| ||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||| ||||    
T  44000660 aaatagttatttatttcataaaaaataatcgttaatttataaaattatgaagaaagagtaccgatacacctcattttgtgagtgtaccgtagaagatccc 44000561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 2261304 - 2261420
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||||||| |||||||||||| |||||| ||||| ||||||| |||| | ||||||| |||||||||| |||||||    
T  2261304 aaaatataaatatt-gacaaa-tagctatttattacataaaaaatgatcgttaatttacaaaattatgaagcaggagtaccggtacacctcactttgtga 2261401  T
Q  101 gtgtaccgtagaagttccc 119  Q
    ||||||| |||||||||||    
T  2261402 gtgtaccatagaagttccc 2261420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 26988486 - 26988388
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcc 118  Q
    ||||| |||||||||||||||||||| |||||| |||||||||||||||| | ||||||||  ||||||||||| |||||||||||||||| |||||||    
T  26988486 aaataactatttactacataaaaaatgatcgttaatttataaaattaagatgcaagagtacaggtacacctcatcttgtgagtgtaccgtaaaagttcc 26988388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 9497846 - 9497943
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttc 117  Q
    |||||||||||||| ||||||||||| ||| || |||||||||||||||| | |||||||||  |||||||||| |||||||||||||||||||||||    
T  9497846 aaatagctatttacaacataaaaaatgatcattaatttataaaattaagatgcaagagtaccgatacacctcatcttgtgagtgtaccgtagaagttc 9497943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 40267790 - 40267888
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||  ||| |||   ||||||||||||||| ||||||||||||||||||||    
T  40267790 aaatagctatttactacataaaaaatggtcgttcatttataaaattaagaag-tagaatactgatacacctcattttgtaagtgtaccgtagaagttccc 40267888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 1043350 - 1043466
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| || |||||| ||||||| |||||||||||| |||||| || |||||||||| |||| | || ||||||| ||||||| |||||||    
T  1043350 aaaatataaatatt-ga-aaaataactatttattacataaaaaatgatcgttaatatataaaattatgaagcaggaataccagtgcacctcactttgtga 1043447  T
Q  101 gtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||    
T  1043448 gtgtaccgtagaagttccc 1043466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 15451537 - 15451421
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| ||||||||| | ||||||| |||||| |||||||||||||||| | ||||||||| ||||||||||| ||||||    
T  15451537 aaaatataaatatt-gacaaa-tagttatttactataaaaaaaatgatcgttaatttataaaattaagatgcaagagtaccggtacacctcatcttgtga 15451440  T
Q  101 gtgtaccgtagaagttccc 119  Q
    ||||| | |||||||||||    
T  15451439 gtgtaacatagaagttccc 15451421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 29265688 - 29265587
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| |||||| | |||||||||| |||||| ||||||||||||| |||  ||||||||| |||||||||| ||||||||||||| ||||||||||||    
T  29265688 aaatagttatttatttcataaaaaatgatcgttaatttataaaattatgaaacaagagtaccggtacacctcactttgtgagtgtacagtagaagttccc 29265589  T
Q  120 at 121  Q
    ||    
T  29265588 at 29265587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 5328891 - 5329009
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| || ||||||  ||||||||||||||||||| ||| ||||||||||||||||||||| | ||||||| | |||||||||||| | |    
T  5328891 aaaatataaatatt-ga-aaaataattatttactacataaaaaatgatcattcatttataaaattaagaagcaggagtaccgggacacctcattttataa 5328988  T
Q  101 gtgtaccgtagaagttcccat 121  Q
     ||||||||||||||| ||||    
T  5328989 atgtaccgtagaagttgccat 5329009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 39646753 - 39646639
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||| || ||| |||||||||||  ||||||||||||||||||||||||| | ||||||| |||||||| ||||| | |    
T  39646753 aaaatataaatatt-gacaaa-tagttaattattacataaaaaacgatcgttcatttataaaattaagaagtaggagtaccggtacaccttattttataa 39646656  T
Q  101 gtgtaccgtagaagttc 117  Q
    |||||||||||||||||    
T  39646655 gtgtaccgtagaagttc 39646639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 38 - 121
Target Start/End: Complemental strand, 2749396 - 2749313
Alignment:
Q  38 taaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcccat 121  Q
    |||||||| |||||| ||||||||||||| | | |||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  2749396 taaaaaatgatcgttaatttataaaattatgcaaaaagagtaccggtacacctcattttgtgagtttaccgtagaagttcccat 2749313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 119
Target Start/End: Original strand, 27847776 - 27847875
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||||  |  |||||  ||||||||||||||||||| ||||| ||||| |||||    
T  27847776 aaatagctatttactacataaaaaatgatcgtccatttataaaattaagaaacagaagtactggtacacctcattttgtgagcgtaccctagaaattccc 27847875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 119
Target Start/End: Original strand, 34634165 - 34634259
Alignment:
Q  24 agctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    ||||||||| | |||||||||| |||||| ||||||||||||| ||| |||||||||| ||||| |||||||||| ||||||||||||||||||||    
T  34634165 agctatttatttcataaaaaatgatcgttaatttataaaattatgaaaaaagagtaccggtacatctcattttgt-agtgtaccgtagaagttccc 34634259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 43841925 - 43841846
Alignment:
Q  37 ataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagtt 116  Q
    ||||||||| |||||| ||||||||||||| ||||||||||||||| ||||||| ||||| |||||||||||||||||||    
T  43841925 ataaaaaatgatcgttaatttataaaattatgaagaaagagtaccaatacaccttattttatgagtgtaccgtagaagtt 43841846  T

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Target: chr8; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 6631025 - 6630907
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||  || |||||||||||||||| | |||| |||| ||| ||||||| ||||||    
T  6631025 aaaatataaatatt-gacaaa-tagctatttactacataaaaaatgattattaatttataaaattaagatgcaagactaccggtatacctcatcttgtga 6630928  T
Q  101 gtgtaccgtagaagttcccat 121  Q
    || |||| |||||||| ||||    
T  6630927 gtataccatagaagtttccat 6630907  T

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Target: chr8; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 36667526 - 36667644
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| | || || |  || ||||||||||  ||    
T  36667526 aaaatataaatatt-gacaaa-tagctatttactacataaaaaataatcgttcatttataaaattaagaagcacgaatatcgatagacctcattttacga 36667623  T
Q  101 gtgtaccgtagaagttcccat 121  Q
    || ||||||| ||||| ||||    
T  36667624 gtctaccgtacaagtttccat 36667644  T

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Target: chr8; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 39300182 - 39300086
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagtt 116  Q
    |||||| |||||| | || ||||||| ||| || ||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| |||||    
T  39300182 aaatagttatttatttcacaaaaaatgatcattaatttataaaattatgaagcaagagtaccggtacacctcattttgtgagtgtaccgtaaaagtt 39300086  T

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Target: chr8; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 40776753 - 40776637
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||||||| | |||||||||| |||||| ||||||||||||| |||| | ||||| | ||||| |||| |||||||    
T  40776753 aaaatataaatatt-gacaaa-tagctatttattccataaaaaatgatcgttaatttataaaattatgaagcaggagtatcggtacatctcactttgtga 40776656  T
Q  101 gtgtaccgtagaagttccc 119  Q
    ||||||| ||||| |||||    
T  40776655 gtgtaccatagaaattccc 40776637  T

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Target: chr8; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 38329567 - 38329452
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| || ||||||| |||||  ||||| |||||| |||||| |||||||||||||  |||  |||||||| ||| | |||| |||||||    
T  38329567 aaaatataaatatt-ga-aaaatagttatttcttacatgaaaaatgatcgttaatttataaaattataaagcgagagtaccggtatatctcactttgtga 38329470  T
Q  101 gtgtaccgtagaagttcc 118  Q
    ||||||||||||||||||    
T  38329469 gtgtaccgtagaagttcc 38329452  T

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Target: chr8; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 34166009 - 34165910
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttca-tttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcc 118  Q
    |||||| |||||| | |||||||||| |||||| | |||||||||||| |||| |||||||||  ||||||||| ||||| ||||||| |||||||||||    
T  34166009 aaatagttatttatttcataaaaaatgatcgttaaatttataaaattatgaagcaagagtaccgatacacctcactttgtaagtgtacggtagaagttcc 34165910  T

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Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 31158888 - 31158960
Alignment:
Q  47 atcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| ||||||| | ||| |||| ||||||||   ||||||||| |||| |||||||||||||||||||||    
T  31158888 atcgttaatttatagatttaggaagcaagagtactgatacacctcaatttgcgagtgtaccgtagaagttccc 31158960  T

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Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 119
Target Start/End: Original strand, 17642400 - 17642479
Alignment:
Q  40 aaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttccc 119  Q
    |||||| || ||| ||||||||| ||  |||| ||||||||| |||||||| | |||| | |||||||||||||||||||    
T  17642400 aaaaatgatagttaatttataaatttttgaagtaagagtaccggtacaccttaatttgcgggtgtaccgtagaagttccc 17642479  T

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Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 119
Target Start/End: Complemental strand, 40547769 - 40547690
Alignment:
Q  41 aaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga-gtgtaccgtagaagttccc 119  Q
    ||||| || ||| |||||| || ||| |||| ||||||||| |||||||||||||||| | ||||||| |||||||||||    
T  40547769 aaaataattgttaatttatcaatttatgaagtaagagtaccggtacacctcattttgttaggtgtaccatagaagttccc 40547690  T

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Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 45452501 - 45452417
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacac 88  Q
    ||||||||||| ||||||||| |||||| ||| |||||||||||| |||| | ||| |||||||||||||| | ||||||| ||||||    
T  45452501 aaaatataaat-tttgacaaa-tagctacttattacataaaaaatgatcgataatt-ataaaattaagaagcaggagtaccggtacac 45452417  T

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Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 36274636 - 36274566
Alignment:
Q  47 atcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttc 117  Q
    |||||| ||||||| | ||| |||| |||||||||||||||||||| ||| |||| ||||  |||||||||    
T  36274636 atcgttaatttatatatttaggaagcaagagtaccagtacacctcaatttatgagggtacaatagaagttc 36274566  T

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Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 36672074 - 36672008
Alignment:
Q  55 tttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcccat 121  Q
    |||||| | ||| |||| ||||||||| |||||||||| |||  ||||||||| |||||||||||||    
T  36672074 tttatagatttatgaagcaagagtaccggtacacctcaatttacgagtgtaccatagaagttcccat 36672008  T

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Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 42194737 - 42194659
Alignment:
Q  42 aaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgag-tgtaccgtagaagttccc 119  Q
    |||| |||||| ||| || || ||| |||| |||| |||| |||||||||||||||| || ||||||||||||||||||    
T  42194737 aaataatcgttaattaatcaatttatgaagtaagaataccggtacacctcattttgttagatgtaccgtagaagttccc 42194659  T

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Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 15231350 - 15231390
Alignment:
Q  76 agtaccagtacacctcattttgtgagtgtaccgtagaagtt 116  Q
    |||||| |||||||||| ||| |||||||||||||||||||    
T  15231350 agtaccggtacacctcactttatgagtgtaccgtagaagtt 15231390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 36162500 - 36162568
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacac 88  Q
    |||||| |||||| | || ||||||| |||||| ||||||||||||| |||  ||||||||| ||||||    
T  36162500 aaatagttatttatttcacaaaaaatgatcgttaatttataaaattatgaaataagagtaccggtacac 36162568  T

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Target: scaffold0308 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 7511 - 7609
Alignment:
Q  20 aaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcc 118  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||  ||||| ||||||||| |||||| ||||||||||||    
T  7511 aaatagctatttactacataaaaaatgatcgttcatttataaaattaagaaggaagagtaccgatacacttcattttgttagtgtatcgtagaagttcc 7609  T

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Target: scaffold0667 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 123 - 240
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    |||||||||||||| |||||| |||||||||| |||||||||||| |||||| ||||||||||||| |||| |  |||||| |||||||||| |||||||    
T  123 aaaatataaatatt-gacaaa-tagctatttattacataaaaaatgatcgttaatttataaaattatgaagcagaagtaccggtacacctcactttgtga 220  T
Q  101 gtgtaccgtagaagttccca 120  Q
    ||||||||||||||||||||    
T  221 gtgtaccgtagaagttccca 240  T

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Target: scaffold0923 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0923
Description:

Target: scaffold0923; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 1 - 94
Alignment:
Q  29 tttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgagtgtaccgtagaagttcccatt 122  Q
    |||| |||||||||| |||||||| ||||||||||||| |||| | ||||||| |||||||||| |||||||||||||||||||||||||||||    
T  1 tttattacataaaaagttatcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtgagtgtaccgtagaagttcccatt 94  T

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Target: scaffold0432 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 3144 - 3032
Alignment:
Q  1 aaaatataaatatttgacaaaatagctatttactacataaaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtga 100  Q
    ||||||||||| ||||||||| |||||||| | |||||||||||| |||||||| ||||||||||| |||| | ||||||| |   |||||| ||| |||    
T  3144 aaaatataaat-tttgacaaa-tagctattaattacataaaaaatgatcgttca-ttataaaattatgaagtaggagtaccgg---acctcactttatga 3051  T
Q  101 gtgtaccgtagaagttccc 119  Q
    ||||||||||||| |||||    
T  3050 gtgtaccgtagaaattccc 3032  T

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Target: scaffold0271 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0271
Description:

Target: scaffold0271; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 16987 - 17068
Alignment:
Q  40 aaaaattatcgttcatttataaaattaagaagaaagagtaccagtacacctcattttgtgag-tgtaccgtagaagttccca 120  Q
    |||||| |||||| ||| ||||| ||| |||| | ||||| | |||||||||| |||||||| |||||||||||||||||||    
T  16987 aaaaatgatcgttaattgataaatttatgaagtaggagtatcggtacacctcaatttgtgaggtgtaccgtagaagttccca 17068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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