View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13899_high_41 (Length: 356)

Name: NF13899_high_41
Description: NF13899
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13899_high_41
NF13899_high_41
[»] chr2 (7 HSPs)
chr2 (1-112)||(35150384-35150495)
chr2 (17-71)||(13478769-13478824)
chr2 (21-97)||(29926861-29926938)
chr2 (7-47)||(6686778-6686818)
chr2 (56-87)||(8001986-8002017)
chr2 (15-87)||(6788469-6788542)
chr2 (7-47)||(29926688-29926728)
[»] chr6 (8 HSPs)
chr6 (7-87)||(10067704-10067785)
chr6 (7-79)||(7792054-7792127)
chr6 (23-87)||(10219595-10219660)
chr6 (21-89)||(33187078-33187147)
chr6 (21-87)||(33806706-33806773)
chr6 (53-99)||(6699625-6699671)
chr6 (57-91)||(24834939-24834973)
chr6 (11-87)||(21926583-21926660)
[»] chr3 (10 HSPs)
chr3 (13-87)||(34979159-34979234)
chr3 (17-77)||(32345677-32345736)
chr3 (21-87)||(43838806-43838873)
chr3 (11-89)||(47944329-47944408)
chr3 (21-90)||(22235463-22235533)
chr3 (61-90)||(38989871-38989900)
chr3 (7-47)||(31186680-31186720)
chr3 (47-87)||(45906847-45906887)
chr3 (57-135)||(48047881-48047961)
chr3 (20-99)||(53705743-53705821)
[»] chr8 (8 HSPs)
chr8 (53-114)||(19793506-19793568)
chr8 (58-132)||(10708439-10708515)
chr8 (58-134)||(21145569-21145647)
chr8 (26-87)||(44362637-44362699)
chr8 (26-71)||(2986941-2986986)
chr8 (7-40)||(35855600-35855633)
chr8 (14-47)||(36469467-36469500)
chr8 (14-89)||(6393831-6393907)
[»] chr7 (5 HSPs)
chr7 (7-90)||(46719997-46720081)
chr7 (21-87)||(5362300-5362367)
chr7 (21-86)||(10228756-10228822)
chr7 (15-114)||(23457770-23457871)
chr7 (47-87)||(29196840-29196880)
[»] chr4 (16 HSPs)
chr4 (26-97)||(8170760-8170832)
chr4 (25-107)||(53039231-53039314)
chr4 (7-87)||(32934123-32934204)
chr4 (58-90)||(11358542-11358574)
chr4 (145-196)||(40881685-40881736)
chr4 (47-89)||(33361061-33361103)
chr4 (13-47)||(37687260-37687294)
chr4 (58-87)||(5979427-5979456)
chr4 (7-87)||(13834369-13834450)
chr4 (26-87)||(46871778-46871839)
chr4 (18-99)||(51003434-51003518)
chr4 (140-180)||(8755914-8755954)
chr4 (15-47)||(23716593-23716625)
chr4 (62-98)||(40317736-40317772)
chr4 (62-98)||(40327810-40327846)
chr4 (7-78)||(46804797-46804869)
[»] chr5 (8 HSPs)
chr5 (7-91)||(9572463-9572547)
chr5 (26-89)||(37853434-37853498)
chr5 (25-87)||(3599855-3599918)
chr5 (15-99)||(33855354-33855439)
chr5 (27-97)||(42525247-42525318)
chr5 (26-87)||(8206088-8206150)
chr5 (7-87)||(16127092-16127173)
chr5 (15-86)||(19342500-19342572)
[»] chr1 (6 HSPs)
chr1 (7-97)||(8778994-8779085)
chr1 (26-79)||(45679565-45679619)
chr1 (7-87)||(29795243-29795324)
chr1 (7-87)||(30050577-30050658)
chr1 (14-97)||(8234288-8234372)
chr1 (26-97)||(31415027-31415099)
[»] scaffold0022 (1 HSPs)
scaffold0022 (17-90)||(82877-82951)
[»] scaffold0003 (1 HSPs)
scaffold0003 (2-86)||(328802-328887)


Alignment Details
Target: chr2 (Bit Score: 76; Significance: 4e-35; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 35150384 - 35150495
Alignment:
Q  1 gctactatagtctctcaatatatcgaaattttaaaatagtttttgatgtgtaatttattagtcaaaatagtctctgacgttaaaatagtctatcaatatg 100  Q
    ||||| |||||||||||||  ||| ||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||| ||| |||||    
T  35150384 gctacaatagtctctcaatgcatcaaaattttaaaatagtttttgatgtgcaatttatcggtcaaaatagtctctgacgttaaaatagtcaatctatatg 35150483  T
Q  101 acattaattctt 112  Q
    ||||||||||||    
T  35150484 acattaattctt 35150495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 13478824 - 13478769
Alignment:
Q  17 aatatatcgaaattttaaaatagtttttga-tgtgtaatttattagtcaaaatagt 71  Q
    |||||||| ||||||||||||||||||||| |||| | ||||||||||||||||||    
T  13478824 aatatatcaaaattttaaaatagtttttgattgtgcattttattagtcaaaatagt 13478769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 29926938 - 29926861
Alignment:
Q  21 tatcgaaattttaaaatagtttttgat-gtgtaatttattagtcaaaatagtctctgacgttaaaatagtctatcaat 97  Q
    |||| |||||||||||||||   |||| ||| | || ||||||||||||||||| ||||||||||||||||| |||||    
T  29926938 tatcaaaattttaaaatagtcaatgattgtgcatttcattagtcaaaatagtctttgacgttaaaatagtctttcaat 29926861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 6686778 - 6686818
Alignment:
Q  7 atagtctctcaatatatcgaaattttaaaatagtttttgat 47  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  6686778 atagtttctcaatatatcaaaattttaaaatagtttttgat 6686818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 56 - 87
Target Start/End: Original strand, 8001986 - 8002017
Alignment:
Q  56 tattagtcaaaatagtctctgacgttaaaata 87  Q
    ||||||||||||||||||||||||||||||||    
T  8001986 tattagtcaaaatagtctctgacgttaaaata 8002017  T

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Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 87
Target Start/End: Complemental strand, 6788542 - 6788469
Alignment:
Q  15 tcaatatatcgaaattttaaaatagtttttga-tgtgtaatttattagtcaaaatagtctctgacgttaaaata 87  Q
    ||||| |||| ||||||||||||||||| ||| |||| | ||| ||||||| |||||||||||| | |||||||    
T  6788542 tcaatgtatcaaaattttaaaatagtttctgattgtgcactttgttagtcagaatagtctctgatgctaaaata 6788469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 29926688 - 29926728
Alignment:
Q  7 atagtctctcaatatatcgaaattttaaaatagtttttgat 47  Q
    ||||| ||| |||||||| ||||||||||||||||||||||    
T  29926688 atagtttcttaatatatccaaattttaaaatagtttttgat 29926728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 10067785 - 10067704
Alignment:
Q  7 atagtctctcaatatatcgaaattttaaaatagtttttga-tgtgtaatttattagtcaaaatagtctctgacgttaaaata 87  Q
    ||||||||||||| |||||||||||||||||||| | ||| |||||| ||| ||| ||||||||||||||||| ||||||||    
T  10067785 atagtctctcaatgtatcgaaattttaaaatagtctctgattgtgtattttgttaatcaaaatagtctctgacattaaaata 10067704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 79
Target Start/End: Original strand, 7792054 - 7792127
Alignment:
Q  7 atagtctctcaatatatcgaaattttaaaatagtttttga-tgtgtaatttattagtcaaaatagtctctgacg 79  Q
    |||||| |||||| |||| |||||| |||||||||| ||| |||  |||||||||||||||||||||| |||||    
T  7792054 atagtccctcaatgtatcaaaatttgaaaatagtttatgaatgtacaatttattagtcaaaatagtctttgacg 7792127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 10219595 - 10219660
Alignment:
Q  23 tcgaaattttaaaatagtttttgat-gtgtaatttattagtcaaaatagtctctgacgttaaaata 87  Q
    ||||||||| |||||||||  |||| ||| | ||| ||||||||||||||||||||||||||||||    
T  10219595 tcgaaatttcaaaatagttcctgattgtgcactttgttagtcaaaatagtctctgacgttaaaata 10219660  T

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Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 33187078 - 33187147
Alignment:
Q  21 tatcgaaattttaaaatagttttt-gatgtgtaatttattagtcaaaatagtctctgacgttaaaatagt 89  Q
    |||||||||||||||||||||||| |||||| | ||   ||||||||||||||  |||||||||||||||    
T  33187078 tatcgaaattttaaaatagtttttggatgtgcagttcgatagtcaaaatagtcattgacgttaaaatagt 33187147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 33806706 - 33806773
Alignment:
Q  21 tatcgaaattttaaaatagtttttgatg-tgtaatttattagtcaaaatagtctctgacgttaaaata 87  Q
    |||||||||| |||||||||  |||||  |||| ||| |||||||||||||||||| |||||||||||    
T  33806706 tatcgaaattctaaaatagtcattgattatgtactttgttagtcaaaatagtctctaacgttaaaata 33806773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 53 - 99
Target Start/End: Complemental strand, 6699671 - 6699625
Alignment:
Q  53 atttattagtcaaaatagtctctgacgttaaaatagtctatcaatat 99  Q
    |||| |||||||||||||||  |||||||||||||||| ||||||||    
T  6699671 atttgttagtcaaaatagtcattgacgttaaaatagtccatcaatat 6699625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 91
Target Start/End: Complemental strand, 24834973 - 24834939
Alignment:
Q  57 attagtcaaaatagtctctgacgttaaaatagtct 91  Q
    ||||||||||||||||||||| |||||||||||||    
T  24834973 attagtcaaaatagtctctgatgttaaaatagtct 24834939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 21926583 - 21926660
Alignment:
Q  11 tctctcaatatatcgaaattttaaaatagtttttga-tgtgtaatttattagtcaaaatagtctctgacgttaaaata 87  Q
    ||||||||| |||||| | ||||||||||| ||||| |||||  | |||||||||||||||||  | |||||||||||    
T  21926583 tctctcaatttatcgataatttaaaatagtatttgattgtgtgttatattagtcaaaatagtcatttacgttaaaata 21926660  T

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Target: chr3 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 34979234 - 34979159
Alignment:
Q  13 tctcaatatatcgaaattttaaaatagtttttga-tgtgtaatttattagtcaaaatagtctctgacgttaaaata 87  Q
    ||||| |||||||||||||||||||||||||| | |||| | ||| |||||||||||||||||| || ||||||||    
T  34979234 tctcactatatcgaaattttaaaatagtttttaattgtgcattttgttagtcaaaatagtctctcacattaaaata 34979159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 32345736 - 32345677
Alignment:
Q  17 aatatatcgaaattttaaaatagtttttgatgtgtaatttattagtcaaaatagtctctga 77  Q
    ||||||| ||||||||||||||||  || ||||||| || |||||||||||||||||||||    
T  32345736 aatatatagaaattttaaaatagtcatt-atgtgtatttcattagtcaaaatagtctctga 32345677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 43838873 - 43838806
Alignment:
Q  21 tatcgaaattttaaaatagtttttgat-gtgtaatttattagtcaaaatagtctctgacgttaaaata 87  Q
    |||| |||||||||||||||  ||||| ||| | ||| |||||||||||||||| |||||||||||||    
T  43838873 tatcaaaattttaaaatagtcattgattgtgcattttgttagtcaaaatagtctttgacgttaaaata 43838806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 47944329 - 47944408
Alignment:
Q  11 tctctcaatatatcgaaattttaaaatagtttttga-tgtgtaatttattagtcaaaatagtctctgacgttaaaatagt 89  Q
    ||||| ||| |||||||||||||||||||| ||||| |||| | ||| |||||||||||| | | |||||||||| ||||    
T  47944329 tctctgaatgtatcgaaattttaaaatagtctttgattgtgcactttgttagtcaaaataatatatgacgttaaactagt 47944408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 90
Target Start/End: Complemental strand, 22235533 - 22235463
Alignment:
Q  21 tatcgaaattttaaaatagtttttgat-gtgtaatttattagtcaaaatagtctctgacgttaaaatagtc 90  Q
    ||||||||||| |||||| |||||||| ||| ||||| |||||||||||| |||||  |||||| ||||||    
T  22235533 tatcgaaatttcaaaataatttttgattgtgcaatttgttagtcaaaataatctctaccgttaatatagtc 22235463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Complemental strand, 38989900 - 38989871
Alignment:
Q  61 gtcaaaatagtctctgacgttaaaatagtc 90  Q
    ||||||||||||||||||||||||||||||    
T  38989900 gtcaaaatagtctctgacgttaaaatagtc 38989871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 31186720 - 31186680
Alignment:
Q  7 atagtctctcaatatatcgaaattttaaaatagtttttgat 47  Q
    |||||||||  ||||||| ||||||||||||||||||||||    
T  31186720 atagtctcttgatatatcaaaattttaaaatagtttttgat 31186680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 45906887 - 45906847
Alignment:
Q  47 tgtgtaatttattagtcaaaatagtctctgacgttaaaata 87  Q
    |||||| |||||||||||||||| ||||| |||||||||||    
T  45906887 tgtgtattttattagtcaaaataatctctaacgttaaaata 45906847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 48047881 - 48047961
Alignment:
Q  57 attagtcaaaatagtctctgacgttaaaatagtctatcaat-atgacattaattctttt-atatggggattgatatgacaa 135  Q
    |||| |||||||||||  ||||||||||||||||  |||||  ||||| ||| |||||| |||| ||||||||||||||||    
T  48047881 attaatcaaaatagtccatgacgttaaaatagtccctcaatgttgacaataactcttttcatatagggattgatatgacaa 48047961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 53705743 - 53705821
Alignment:
Q  20 atatcgaaattttaaaatagtttttgatgtgtaatttattagtcaaaatag--tctctgacgttaaaatagtctatcaatat 99  Q
    |||| ||| |||||||||||||||   |||| | |||||||||||||||||  ||||||||| ||||||| || ||||||||    
T  53705743 atattgaacttttaaaatagtttt---tgtgcactttattagtcaaaatagtttctctgacgctaaaataatccatcaatat 53705821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 19793568 - 19793506
Alignment:
Q  53 atttattagtcaaaatagtctctgacgttaaaatagtctatc-aatatgacattaattctttt 114  Q
    |||| |||||||||  ||||||| |||||||||||||||||| ||||||||||||||||||||    
T  19793568 atttgttagtcaaataagtctcttacgttaaaatagtctatcaaatatgacattaattctttt 19793506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 132
Target Start/End: Original strand, 10708439 - 10708515
Alignment:
Q  58 ttagtcaaaatagtctctgacgttaaaatagtctatcaata-tgacattaattc-ttttatatggggattgatatga 132  Q
    |||||||||||||||| ||||||||||||||| | ||||||  ||||||||  | |||||||| |||||||||||||    
T  10708439 ttagtcaaaatagtctttgacgttaaaatagtttttcaataccgacattaaccctttttatatagggattgatatga 10708515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 134
Target Start/End: Complemental strand, 21145647 - 21145569
Alignment:
Q  58 ttagtcaaaatagtctctgacgttaaaatagtctatcaat-atgacattaattc-ttttatatggggattgatatgaca 134  Q
    |||||||||||||||||||| ||||||||||||  |||||  ||||||||| || |||||||| |||| ||||| ||||    
T  21145647 ttagtcaaaatagtctctgatgttaaaatagtccctcaatgctgacattaactctttttatatagggactgataggaca 21145569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 44362699 - 44362637
Alignment:
Q  26 aaattttaaaatagtttttgat-gtgtaatttattagtcaaaatagtctctgacgttaaaata 87  Q
    ||||||||||||||||| |||| ||||||||  |||||||||||||||| | | |||||||||    
T  44362699 aaattttaaaatagtttctgattgtgtaattcgttagtcaaaatagtctataatgttaaaata 44362637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 2986941 - 2986986
Alignment:
Q  26 aaattttaaaatagtttttgatgtgtaatttattagtcaaaatagt 71  Q
    ||||||||||||||||| ||||||| | ||| ||||||||||||||    
T  2986941 aaattttaaaatagtttatgatgtgcattttgttagtcaaaatagt 2986986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 40
Target Start/End: Original strand, 35855600 - 35855633
Alignment:
Q  7 atagtctctcaatatatcgaaattttaaaatagt 40  Q
    |||||||||||||||||||||||| |||||||||    
T  35855600 atagtctctcaatatatcgaaattctaaaatagt 35855633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 47
Target Start/End: Original strand, 36469467 - 36469500
Alignment:
Q  14 ctcaatatatcgaaattttaaaatagtttttgat 47  Q
    ||||||||||| ||||||||||||||||||||||    
T  36469467 ctcaatatatcaaaattttaaaatagtttttgat 36469500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 89
Target Start/End: Original strand, 6393831 - 6393907
Alignment:
Q  14 ctcaatatatcgaaattttaaaatagtttttga-tgtgtaatttattagtcaaaatagtctctgacgttaaaatagt 89  Q
    |||||| ||||||||||| |||||||||  ||| |||| | ||||||||||||||||||  || || ||||||||||    
T  6393831 ctcaatgtatcgaaatttcaaaatagttcatgattgtgcactttattagtcaaaatagttcctaacattaaaatagt 6393907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000008; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 46720081 - 46719997
Alignment:
Q  7 atagtctctcaatatatcgaaattttaaaatagtttttgat-gtgtaatttattagtcaaaatagtctctgacgttaaaatagtc 90  Q
    |||||| |||||| ||| ||||||||||||| || |||||| ||| | ||| |||||||||||||| | ||||||||||||||||    
T  46720081 atagtccctcaatgtattgaaattttaaaatggtatttgattgtgcactttgttagtcaaaatagtttttgacgttaaaatagtc 46719997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 5362300 - 5362367
Alignment:
Q  21 tatcgaaattttaaaatagtttttgat-gtgtaatttattagtcaaaatagtctctgacgttaaaata 87  Q
    ||||||||||| |||||||||  |||| ||||||||| ||||||||||||||| ||||  ||||||||    
T  5362300 tatcgaaatttcaaaatagttcatgattgtgtaatttgttagtcaaaatagtccctgatattaaaata 5362367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 10228756 - 10228822
Alignment:
Q  21 tatcgaaattttaaaatagtttttgat-gtgtaatttattagtcaaaatagtctctgacgttaaaat 86  Q
    ||||||||||| |||||||| |||||| ||| ||||  |||||||||||||||| |||| |||||||    
T  10228756 tatcgaaatttcaaaatagtctttgattgtgcaattcgttagtcaaaatagtctttgaccttaaaat 10228822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 23457871 - 23457770
Alignment:
Q  15 tcaatatatcgaaattttaaaatagtttttga-tgtgtaatttattagtcaaaatagtctctgacgttaaaatagtctatcaat-atgacattaattctt 112  Q
    ||||| ||||||||||||||||||||| |||| |||| | ||| ||| |||||||||| | |   ||||||||||||| |||||  ||||||||| ||||    
T  23457871 tcaatgtatcgaaattttaaaatagttattgattgtgcactttgttaatcaaaatagttttttgtgttaaaatagtctctcaatggtgacattaactctt 23457772  T
Q  113 tt 114  Q
    ||    
T  23457771 tt 23457770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 29196840 - 29196880
Alignment:
Q  47 tgtgtaatttattagtcaaaatagtctctgacgttaaaata 87  Q
    |||||| |||||||||||||||||||| ||| |||||||||    
T  29196840 tgtgtactttattagtcaaaatagtctttgatgttaaaata 29196880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000008; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 97
Target Start/End: Original strand, 8170760 - 8170832
Alignment:
Q  26 aaattttaaaatagtttttgat-gtgtaatttattagtcaaaatagtctctgacgttaaaatagtctatcaat 97  Q
    |||||| |||||||| |||||| ||| | ||| ||||||||||||||||||||||| |||||||||| |||||    
T  8170760 aaatttcaaaatagtctttgattgtgcactttgttagtcaaaatagtctctgacgtcaaaatagtctctcaat 8170832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 107
Target Start/End: Complemental strand, 53039314 - 53039231
Alignment:
Q  25 gaaattttaaaatagtttttgat-gtgtaatttattagtcaaaatagtctctgacgttaaaatagtctatcaata-tgacattaa 107  Q
    |||||||||||||||| ||| || ||||||||||||||| ||||||  |||||||||||||| ||| |||||||| |||||||||    
T  53039314 gaaattttaaaatagtcttttattgtgtaatttattagttaaaataacctctgacgttaaaacagt-tatcaatattgacattaa 53039231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 32934204 - 32934123
Alignment:
Q  7 atagtctctcaatatatcgaaattttaaaatagtttttga-tgtgtaatttattagtcaaaatagtctctgacgttaaaata 87  Q
    |||||| |||||| |||| ||||||||||||||||||||| |||| | |||  ||||||||||||| ||| || ||||||||    
T  32934204 atagtccctcaatgtatcaaaattttaaaatagtttttgattgtgcactttgctagtcaaaatagtttctaacattaaaata 32934123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 90
Target Start/End: Original strand, 11358542 - 11358574
Alignment:
Q  58 ttagtcaaaatagtctctgacgttaaaatagtc 90  Q
    |||||||||||||||||||||||||||||||||    
T  11358542 ttagtcaaaatagtctctgacgttaaaatagtc 11358574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 40881685 - 40881736
Alignment:
Q  145 aagaattaatgtgacaatattaacgaagaattttaaggtaaatggtcatttt 196  Q
    |||||||||  ||||||||||||||||||||||||| |||||| || |||||    
T  40881685 aagaattaacatgacaatattaacgaagaattttaatgtaaatagttatttt 40881736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 89
Target Start/End: Complemental strand, 33361103 - 33361061
Alignment:
Q  47 tgtgtaatttattagtcaaaatagtctctgacgttaaaatagt 89  Q
    |||||| ||||||||||||||||||||||||  ||||||||||    
T  33361103 tgtgtattttattagtcaaaatagtctctgatattaaaatagt 33361061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 47
Target Start/End: Complemental strand, 37687294 - 37687260
Alignment:
Q  13 tctcaatatatcgaaattttaaaatagtttttgat 47  Q
    |||||||||||| ||||||||||||||||||||||    
T  37687294 tctcaatatatcaaaattttaaaatagtttttgat 37687260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 87
Target Start/End: Original strand, 5979427 - 5979456
Alignment:
Q  58 ttagtcaaaatagtctctgacgttaaaata 87  Q
    ||||||||||||||||||||||||||||||    
T  5979427 ttagtcaaaatagtctctgacgttaaaata 5979456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 13834369 - 13834450
Alignment:
Q  7 atagtctctcaatatatcgaaattttaaaatagtttttga-tgtgtaatttattagtcaaaatagtctctgacgttaaaata 87  Q
    |||||| |||||| |||| |||||||||||||||  |||| |||| | ||| |||||||||||||||| | || ||||||||    
T  13834369 atagtccctcaatttatcaaaattttaaaatagtccttgattgtgcactttgttagtcaaaatagtctttaacattaaaata 13834450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 46871839 - 46871778
Alignment:
Q  26 aaattttaaaatagtttttgatgtgtaatttattagtcaaaatagtctctgacgttaaaata 87  Q
    |||||||| |||||| |||  |||||| |||||||||||||||||||  ||||| |||||||    
T  46871839 aaattttataatagtctttattgtgtactttattagtcaaaatagtcattgacgctaaaata 46871778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 51003434 - 51003518
Alignment:
Q  18 atatatcgaaattttaaaatagtttttgat-gtgtaatttattagtcaaaatagtctctgac--gttaaaatagtctatcaatat 99  Q
    ||||||| ||||| ||| ||||||| | || ||||| |||||||||||||||||||||| ||  ||||||||||| | |||||||    
T  51003434 atatatcaaaattctaagatagtttgtaattgtgtattttattagtcaaaatagtctctaacgtgttaaaatagtttttcaatat 51003518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 8755914 - 8755954
Alignment:
Q  140 tattaaagaattaatgtgacaatattaacgaagaattttaa 180  Q
    |||||||| |||||| ||||||||||||||||| |||||||    
T  8755914 tattaaaggattaatatgacaatattaacgaagtattttaa 8755954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 47
Target Start/End: Original strand, 23716593 - 23716625
Alignment:
Q  15 tcaatatatcgaaattttaaaatagtttttgat 47  Q
    ||||| |||||||||||||||||||||||||||    
T  23716593 tcaatttatcgaaattttaaaatagtttttgat 23716625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 40317772 - 40317736
Alignment:
Q  62 tcaaaatagtctctgacgttaaaatagtctatcaata 98  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  40317772 tcaaaatagtctctgacgttaaaataatctctcaata 40317736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 98
Target Start/End: Complemental strand, 40327846 - 40327810
Alignment:
Q  62 tcaaaatagtctctgacgttaaaatagtctatcaata 98  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  40327846 tcaaaatagtctctgacgttaaaataatctctcaata 40327810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 46804797 - 46804869
Alignment:
Q  7 atagtctctcaatatatcgaaattttaaaatagtttttga-tgtgtaatttattagtcaaaatagtctctgac 78  Q
    |||||| |||||| |||| ||||||||||||||| | ||| |||  | ||| |||||||||||||||||||||    
T  46804797 atagtccctcaatgtatcaaaattttaaaatagtctctgattgtacactttgttagtcaaaatagtctctgac 46804869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 9572463 - 9572547
Alignment:
Q  7 atagtctctcaatatatcgaaattttaaaatagtttttgatgtgtaatttattagtcaaaatagtctctgacgttaaaatagtct 91  Q
    ||||||| ||||| |||||||||| |||||  ||| ||| | || |  | ||||||||||||||||| |||||||||||||||||    
T  9572463 atagtctttcaatgtatcgaaattctaaaaccgttattgttttgcacctcattagtcaaaatagtctttgacgttaaaatagtct 9572547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 89
Target Start/End: Complemental strand, 37853498 - 37853434
Alignment:
Q  26 aaattttaaaatagtttttgat-gtgtaatttattagtcaaaatagtctctgacgttaaaatagt 89  Q
    ||||||||||||||||||| || || || ||| |||||||||||||||||| || ||||||||||    
T  37853498 aaattttaaaatagtttttaattgtatactttgttagtcaaaatagtctctaacattaaaatagt 37853434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 25 - 87
Target Start/End: Original strand, 3599855 - 3599918
Alignment:
Q  25 gaaattttaaaatagtttttgat-gtgtaatttattagtcaaaatagtctctgacgttaaaata 87  Q
    |||||||||||||||| |||||| ||||| ||| ||| ||||||| |||||| |||||||||||    
T  3599855 gaaattttaaaatagtgtttgattgtgtattttgttaatcaaaatggtctctcacgttaaaata 3599918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 33855354 - 33855439
Alignment:
Q  15 tcaatatatcgaaattttaaaatagtttttgatgtgtaatttatt--agtcaaaatagtctctgacgttaaaatagtctatcaatat 99  Q
    |||||||||| |||||||||||| ||||||||| ||||  |||||  ||| |||||||||||| ||||||||||  ||| |||||||    
T  33855354 tcaatatatcaaaattttaaaattgtttttgat-tgtacattattcaagttaaaatagtctcttacgttaaaatgttctgtcaatat 33855439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 42525247 - 42525318
Alignment:
Q  27 aattttaaaatagtttttgat-gtgtaatttattagtcaaaatagtctctgacgttaaaatagtctatcaat 97  Q
    |||||||||||| |||||||| ||| | || ||||||||||||||| |||||| || |||||||| ||||||    
T  42525247 aattttaaaataatttttgattgtggacttcattagtcaaaatagtttctgacattgaaatagtccatcaat 42525318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 8206088 - 8206150
Alignment:
Q  26 aaattttaaaatagtttttgat-gtgtaatttattagtcaaaatagtctctgacgttaaaata 87  Q
    ||||||||||||||| |||||| ||| |  || ||| ||||||||||||||||||||||||||    
T  8206088 aaattttaaaatagtctttgattgtgcacattgttaatcaaaatagtctctgacgttaaaata 8206150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 16127092 - 16127173
Alignment:
Q  7 atagtctctcaatatatcgaaattttaaaatagtttttgat-gtgtaatttattagtcaaaatagtctctgacgttaaaata 87  Q
    ||||||||||||  |||| |||||| ||||||||  ||||| ||||| ||| |||||||||||| | | |||||||||||||    
T  16127092 atagtctctcaaagtatcaaaatttcaaaatagtccttgattgtgtagtttgttagtcaaaataatatttgacgttaaaata 16127173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 86
Target Start/End: Complemental strand, 19342572 - 19342500
Alignment:
Q  15 tcaatatatcgaaattttaaaatagtttttga-tgtgtaatttattagtcaaaatagtctctgacgttaaaat 86  Q
    |||||||||  ||||||||||||||||||||| |||| | | |||||||||| ||| | ||| ||||||||||    
T  19342572 tcaatatattaaaattttaaaatagtttttgattgtgcattatattagtcaatataatatcttacgttaaaat 19342500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 32; Significance: 0.000000008; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 8778994 - 8779085
Alignment:
Q  7 atagtctctcaatatatcgaaattttaaaatagtttttga-tgtgtaatttattagtcaaaatagtctctgacgttaaaatagtctatcaat 97  Q
    |||||| ||||||||||| |||||| |||||||||| ||| |||| | ||| ||||| |||||||||||||  | ||||||| ||| |||||    
T  8778994 atagtccctcaatatatcaaaatttcaaaatagtttctgattgtgcactttgttagttaaaatagtctctggtgctaaaataatctctcaat 8779085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 45679565 - 45679619
Alignment:
Q  26 aaattttaaaatagtttttga-tgtgtaatttattagtcaaaatagtctctgacg 79  Q
    ||||||||||||||||||||| |||| | | ||||||||||||| ||||||||||    
T  45679565 aaattttaaaatagtttttgattgtgcactctattagtcaaaatggtctctgacg 45679619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 29795324 - 29795243
Alignment:
Q  7 atagtctctcaatatatcgaaattttaaaatagtttttga-tgtgtaatttattagtcaaaatagtctctgacgttaaaata 87  Q
    ||||||| | |||||||| ||||||||||||||| ||||| |||| | | | ||| |||||||||||||||| ||| |||||    
T  29795324 atagtcttttaatatatcaaaattttaaaatagtatttgattgtgcactatgttaatcaaaatagtctctgatgttgaaata 29795243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 87
Target Start/End: Complemental strand, 30050658 - 30050577
Alignment:
Q  7 atagtctctcaatatatcgaaattttaaaatagtttttgatg-tgtaatttattagtcaaaatagtctctgacgttaaaata 87  Q
    |||||| || ||| ||||||||||| |||||||| | ||||  || ||||| |||||||||||||||||| || ||||||||    
T  30050658 atagtcccttaatgtatcgaaatttcaaaatagtctatgattatgcaatttgttagtcaaaatagtctctcacattaaaata 30050577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 8234372 - 8234288
Alignment:
Q  14 ctcaatatatcgaaattttaaaatagtttttga-tgtgtaatttattagtcaaaatagtctctgacgttaaaatagtctatcaat 97  Q
    ||||||||||| ||||||||||||||||||| | |||| | | | ||| |||||||| |||||| || ||||||| ||| |||||    
T  8234372 ctcaatatatcaaaattttaaaatagtttttaattgtgcattctgttaatcaaaataatctctgccgctaaaataatctctcaat 8234288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 97
Target Start/End: Complemental strand, 31415099 - 31415027
Alignment:
Q  26 aaattttaaaatagtttttgat-gtgtaatttattagtcaaaatagtctctgacgttaaaatagtctatcaat 97  Q
    ||||||||||||||| |||||| ||||| || ||| || ||||||||||||| || ||||||| || ||||||    
T  31415099 aaattttaaaatagtatttgattgtgtacttcattggttaaaatagtctctgtcgataaaataatccatcaat 31415027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 82877 - 82951
Alignment:
Q  17 aatatatcgaaattttaaaatagtttttgat-gtgtaatttattagtcaaaatagtctctgacgttaaaatagtc 90  Q
    |||||||| ||||| ||||||||| | |||| || || ||| ||| |||||||||||||| ||||||||||||||    
T  82877 aatatatcaaaattctaaaatagtatctgattgtatattttgttaatcaaaatagtctctaacgttaaaatagtc 82951  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 328802 - 328887
Alignment:
Q  2 ctactatagtctctcaatatatcgaaattttaaaatagtttttgat-gtgtaatttattagtcaaaatagtctctgacgttaaaat 86  Q
    |||| ||||||| ||||| |||||||||||||||||| | |||||| ||  ||||| | ||||||||| ||||| ||| |||||||    
T  328802 ctacaatagtctttcaatgtatcgaaattttaaaataatctttgatggtacaatttgtcagtcaaaatcgtctccgacattaaaat 328887  T

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