View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13899_high_56 (Length: 298)

Name: NF13899_high_56
Description: NF13899
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13899_high_56
NF13899_high_56
[»] chr5 (27 HSPs)
chr5 (154-281)||(30755665-30755791)
chr5 (20-125)||(2740279-2740384)
chr5 (155-275)||(30740678-30740798)
chr5 (14-127)||(28177778-28177891)
chr5 (12-125)||(33149620-33149733)
chr5 (12-127)||(6679701-6679816)
chr5 (12-125)||(18520866-18520979)
chr5 (12-127)||(2252150-2252265)
chr5 (12-125)||(35785204-35785317)
chr5 (12-125)||(36732924-36733037)
chr5 (12-125)||(40145412-40145525)
chr5 (15-127)||(35943877-35943989)
chr5 (12-127)||(3921247-3921362)
chr5 (12-127)||(26720519-26720634)
chr5 (12-127)||(26990268-26990383)
chr5 (12-125)||(14831819-14831932)
chr5 (13-128)||(21370016-21370121)
chr5 (12-123)||(13811659-13811770)
chr5 (12-127)||(39688879-39688994)
chr5 (12-127)||(15409592-15409707)
chr5 (12-127)||(31008991-31009106)
chr5 (26-125)||(33825320-33825419)
chr5 (12-125)||(42414284-42414397)
chr5 (72-125)||(36875645-36875698)
chr5 (67-126)||(10356638-10356698)
chr5 (12-125)||(20073498-20073611)
chr5 (12-58)||(2177436-2177482)
[»] chr7 (38 HSPs)
chr7 (12-127)||(36208176-36208291)
chr7 (17-125)||(3434567-3434675)
chr7 (12-125)||(3784000-3784113)
chr7 (12-125)||(19329847-19329960)
chr7 (12-127)||(12310909-12311022)
chr7 (12-127)||(35522879-35522994)
chr7 (12-127)||(41423685-41423800)
chr7 (20-125)||(7389394-7389499)
chr7 (12-125)||(8080365-8080478)
chr7 (12-125)||(38267045-38267158)
chr7 (21-125)||(19436178-19436282)
chr7 (12-127)||(18207183-18207297)
chr7 (12-127)||(46033783-46033898)
chr7 (12-125)||(35137538-35137651)
chr7 (12-125)||(38837222-38837335)
chr7 (12-125)||(40957712-40957825)
chr7 (21-125)||(36361904-36362008)
chr7 (21-125)||(36362031-36362135)
chr7 (20-127)||(21234404-21234511)
chr7 (12-127)||(22343364-22343479)
chr7 (60-127)||(32564456-32564523)
chr7 (12-127)||(41915744-41915859)
chr7 (12-125)||(10343545-10343658)
chr7 (35-127)||(46374807-46374899)
chr7 (12-127)||(26296647-26296762)
chr7 (12-94)||(27744291-27744373)
chr7 (25-127)||(38044200-38044302)
chr7 (12-125)||(3694372-3694485)
chr7 (12-125)||(4999496-4999609)
chr7 (62-127)||(40846145-40846210)
chr7 (12-127)||(8238215-8238331)
chr7 (12-127)||(39255906-39256020)
chr7 (12-125)||(2318225-2318338)
chr7 (12-127)||(31735887-31735995)
chr7 (12-125)||(35468837-35468950)
chr7 (12-92)||(16374806-16374886)
chr7 (12-127)||(7727909-7728024)
chr7 (12-125)||(32951475-32951588)
[»] chr6 (22 HSPs)
chr6 (12-127)||(31976251-31976366)
chr6 (12-123)||(32869685-32869796)
chr6 (12-125)||(22880640-22880753)
chr6 (12-125)||(17598559-17598672)
chr6 (12-125)||(11427621-11427736)
chr6 (12-127)||(15508006-15508121)
chr6 (12-127)||(15990024-15990139)
chr6 (12-127)||(30341342-30341457)
chr6 (12-125)||(12732487-12732600)
chr6 (12-125)||(31953012-31953125)
chr6 (12-123)||(946383-946494)
chr6 (12-125)||(6209447-6209560)
chr6 (13-125)||(15832582-15832694)
chr6 (65-125)||(28536521-28536581)
chr6 (12-127)||(31110743-31110856)
chr6 (12-127)||(4231551-4231666)
chr6 (15-89)||(23128112-23128186)
chr6 (12-86)||(30870058-30870132)
chr6 (25-126)||(9379707-9379808)
chr6 (12-125)||(29857832-29857945)
chr6 (15-118)||(31109385-31109488)
chr6 (64-125)||(22422052-22422113)
[»] chr4 (35 HSPs)
chr4 (12-125)||(6034049-6034162)
chr4 (12-125)||(50052410-50052523)
chr4 (12-125)||(50526153-50526266)
chr4 (12-125)||(48183031-48183144)
chr4 (12-127)||(50813874-50813989)
chr4 (12-125)||(480429-480542)
chr4 (12-125)||(11511444-11511557)
chr4 (12-125)||(41236352-41236465)
chr4 (12-127)||(40574782-40574897)
chr4 (12-127)||(55475194-55475309)
chr4 (12-125)||(29239891-29240004)
chr4 (12-125)||(42044349-42044462)
chr4 (12-89)||(56300147-56300224)
chr4 (12-127)||(19670698-19670813)
chr4 (60-127)||(29547989-29548056)
chr4 (12-127)||(31910195-31910310)
chr4 (25-127)||(32766961-32767063)
chr4 (12-125)||(3481659-3481772)
chr4 (12-125)||(24995089-24995202)
chr4 (12-125)||(29234227-29234340)
chr4 (12-125)||(54473515-54473628)
chr4 (12-127)||(48647708-48647823)
chr4 (12-110)||(17983725-17983823)
chr4 (25-127)||(47986211-47986313)
chr4 (60-127)||(55079744-55079811)
chr4 (20-86)||(18769037-18769103)
chr4 (12-86)||(41823926-41824000)
chr4 (12-125)||(23608240-23608353)
chr4 (60-127)||(8343193-8343260)
chr4 (25-125)||(29977890-29977990)
chr4 (60-127)||(18924525-18924592)
chr4 (12-127)||(28480250-28480365)
chr4 (12-127)||(28481125-28481240)
chr4 (12-127)||(28482000-28482115)
chr4 (57-127)||(44536773-44536842)
[»] scaffold1268 (1 HSPs)
scaffold1268 (12-125)||(911-1024)
[»] scaffold1267 (1 HSPs)
scaffold1267 (12-125)||(911-1024)
[»] chr8 (31 HSPs)
chr8 (12-125)||(5957835-5957948)
chr8 (12-125)||(37038484-37038597)
chr8 (12-125)||(34012278-34012391)
chr8 (12-127)||(10621069-10621184)
chr8 (12-127)||(15258911-15259026)
chr8 (12-127)||(43414563-43414678)
chr8 (12-125)||(1179922-1180035)
chr8 (12-125)||(12831052-12831165)
chr8 (12-123)||(14547929-14548040)
chr8 (12-127)||(34307219-34307334)
chr8 (15-125)||(15197338-15197448)
chr8 (12-125)||(504103-504216)
chr8 (12-125)||(4854845-4854958)
chr8 (12-88)||(38229470-38229546)
chr8 (12-127)||(16383380-16383495)
chr8 (12-125)||(40423925-40424038)
chr8 (12-127)||(10284613-10284728)
chr8 (12-110)||(8841414-8841512)
chr8 (12-86)||(9122229-9122303)
chr8 (26-127)||(15048178-15048278)
chr8 (20-125)||(23122587-23122692)
chr8 (12-125)||(44507069-44507182)
chr8 (12-127)||(16056383-16056498)
chr8 (12-127)||(24307775-24307890)
chr8 (25-127)||(32032728-32032829)
chr8 (12-125)||(20074924-20075029)
chr8 (60-127)||(24307632-24307699)
chr8 (60-127)||(30479504-30479571)
chr8 (53-127)||(14055615-14055689)
chr8 (12-127)||(17443828-17443943)
chr8 (12-125)||(42221520-42221633)
[»] chr1 (32 HSPs)
chr1 (12-125)||(51898665-51898778)
chr1 (12-127)||(32813250-32813365)
chr1 (12-125)||(37649203-37649316)
chr1 (12-125)||(47452302-47452415)
chr1 (12-125)||(2581920-2582033)
chr1 (12-125)||(9474858-9474971)
chr1 (12-125)||(27564717-27564830)
chr1 (12-125)||(44548358-44548471)
chr1 (12-125)||(3000324-3000437)
chr1 (12-127)||(6260873-6260988)
chr1 (12-127)||(44453982-44454097)
chr1 (12-127)||(50590982-50591097)
chr1 (15-125)||(8346373-8346483)
chr1 (12-125)||(38595159-38595272)
chr1 (12-127)||(5958982-5959097)
chr1 (60-127)||(41608523-41608590)
chr1 (12-125)||(38632303-38632416)
chr1 (12-125)||(48716264-48716377)
chr1 (12-125)||(50630463-50630576)
chr1 (12-92)||(48489338-48489418)
chr1 (17-135)||(26440728-26440847)
chr1 (12-127)||(45044542-45044657)
chr1 (20-125)||(43137-43242)
chr1 (16-125)||(26274437-26274546)
chr1 (12-125)||(41758810-41758923)
chr1 (12-99)||(13414792-13414879)
chr1 (12-125)||(11152360-11152472)
chr1 (20-125)||(23597081-23597186)
chr1 (65-125)||(3302568-3302628)
chr1 (12-127)||(49811509-49811624)
chr1 (12-127)||(37926420-37926535)
chr1 (12-127)||(47748446-47748560)
[»] chr3 (38 HSPs)
chr3 (12-127)||(26754698-26754813)
chr3 (12-125)||(53982016-53982129)
chr3 (13-127)||(26141515-26141629)
chr3 (15-125)||(49607419-49607529)
chr3 (12-126)||(52629304-52629418)
chr3 (12-125)||(33644205-33644318)
chr3 (12-125)||(8076398-8076511)
chr3 (12-125)||(14623821-14623934)
chr3 (12-127)||(11347904-11348019)
chr3 (13-127)||(11907374-11907488)
chr3 (12-125)||(24699936-24700049)
chr3 (12-125)||(30801715-30801828)
chr3 (12-125)||(54868877-54868990)
chr3 (17-125)||(48587078-48587186)
chr3 (12-127)||(20764897-20765012)
chr3 (20-127)||(33118841-33118948)
chr3 (12-127)||(48375688-48375803)
chr3 (27-125)||(27714888-27714986)
chr3 (15-125)||(31456694-31456804)
chr3 (12-125)||(17470410-17470523)
chr3 (54-125)||(11095377-11095448)
chr3 (13-127)||(41189747-41189861)
chr3 (12-125)||(13898037-13898150)
chr3 (12-125)||(41080714-41080825)
chr3 (20-127)||(47531868-47531975)
chr3 (20-127)||(51419350-51419457)
chr3 (12-127)||(1758438-1758555)
chr3 (12-125)||(25407129-25407243)
chr3 (12-125)||(35536631-35536744)
chr3 (12-108)||(36331311-36331407)
chr3 (57-128)||(42823113-42823184)
chr3 (61-127)||(45058584-45058649)
chr3 (12-125)||(8956767-8956880)
chr3 (15-125)||(35965767-35965869)
chr3 (59-127)||(36331407-36331475)
chr3 (12-125)||(36707410-36707519)
chr3 (60-126)||(25395363-25395429)
chr3 (12-89)||(9563040-9563117)
[»] chr2 (35 HSPs)
chr2 (12-127)||(26891486-26891601)
chr2 (12-125)||(17473025-17473138)
chr2 (12-125)||(33436082-33436195)
chr2 (12-127)||(17819986-17820101)
chr2 (20-127)||(40613892-40613999)
chr2 (12-125)||(9058485-9058598)
chr2 (12-125)||(28863460-28863573)
chr2 (12-124)||(3439985-3440097)
chr2 (12-125)||(7465717-7465830)
chr2 (12-125)||(13438348-13438461)
chr2 (12-125)||(20700820-20700933)
chr2 (21-125)||(5574479-5574583)
chr2 (15-125)||(10249367-10249477)
chr2 (12-125)||(19930802-19930915)
chr2 (12-125)||(30915468-30915581)
chr2 (12-125)||(32505630-32505743)
chr2 (12-125)||(40701483-40701596)
chr2 (12-127)||(45097717-45097832)
chr2 (13-87)||(3737986-3738060)
chr2 (12-125)||(41575142-41575256)
chr2 (13-127)||(42257196-42257310)
chr2 (12-125)||(28381637-28381750)
chr2 (12-127)||(38732357-38732472)
chr2 (60-127)||(43490124-43490191)
chr2 (12-110)||(2997469-2997567)
chr2 (12-125)||(4060690-4060803)
chr2 (12-125)||(33436216-33436329)
chr2 (15-127)||(15428725-15428837)
chr2 (25-125)||(27864709-27864809)
chr2 (20-127)||(38273132-38273239)
chr2 (12-110)||(13365373-13365471)
chr2 (53-125)||(38882837-38882908)
chr2 (12-127)||(2533127-2533241)
chr2 (20-127)||(36168839-36168946)
chr2 (65-125)||(17823789-17823849)
[»] scaffold0316 (1 HSPs)
scaffold0316 (21-92)||(17092-17163)
[»] scaffold0018 (1 HSPs)
scaffold0018 (12-110)||(152518-152616)
[»] scaffold0321 (1 HSPs)
scaffold0321 (12-127)||(10091-10206)
[»] scaffold0237 (1 HSPs)
scaffold0237 (12-125)||(4034-4147)


Alignment Details
Target: chr5 (Bit Score: 104; Significance: 7e-52; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 154 - 281
Target Start/End: Original strand, 30755665 - 30755791
Alignment:
Q  154 gcacttgtaaggcagaaacacttgcacaagatagtgtattaaaaaccaactatgttttaaacctttattaatgttgcacgtaaagtatttaaagaaaaat 253  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  30755665 gcacttgtaaggcagaaacacttaca-aagatagtgtattaaaaaccaactatgtttttaacctttattaatgttgcacataaagtatttaaagaaaaat 30755763  T
Q  254 atacaatcaaacctctttaggaagaact 281  Q
    ||||||||||||| ||||||||||||||    
T  30755764 atacaatcaaacccctttaggaagaact 30755791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 2740384 - 2740279
Alignment:
Q  20 gagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatg 119  Q
    ||||| ||||||||| ||||||||||| |||| |||||||| || |||||| |||||||||||||||||| |||| |||| |||||||||||||||||||    
T  2740384 gagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatg 2740285  T
Q  120 tatcat 125  Q
    ||||||    
T  2740284 tatcat 2740279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 155 - 275
Target Start/End: Original strand, 30740678 - 30740798
Alignment:
Q  155 cacttgtaaggcagaaacacttgcacaagatagtgtattaaaaaccaactatgttttaaacctttattaatgttgcacgtaaagtatttaaagaaaaa-t 253  Q
    |||||||||| |||||| |||| ||  | ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||| |    
T  30740678 cacttgtaagacagaaaaacttacatgatatagtgt-ttaaaaaccaactatgtttttaacctttattaatgttgcacataaagtatttaaataaaaatt 30740776  T
Q  254 atacaatcaaacctctttagga 275  Q
    ||||||||||||| ||||||||    
T  30740777 atacaatcaaacccctttagga 30740798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 14 - 127
Target Start/End: Complemental strand, 28177891 - 28177778
Alignment:
Q  14 gaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatg 113  Q
    ||||| ||||| ||||||||| |||| |||||| || | || |||||||| |||||| |||||||||||||||||| |||| |||| |||||||||||||    
T  28177891 gaagaggagagaaaagagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatg 28177792  T
Q  114 tctatgtatcataa 127  Q
    ||||||||||||||    
T  28177791 tctatgtatcataa 28177778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 33149620 - 33149733
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| |||| |||||||| || |||||  |||||||||||||||||| |||| |||| ||||||||||     
T  33149620 gagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaaggg 33149719  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  33149720 tgtctatgtatcat 33149733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 6679816 - 6679701
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| |||||||||||||| |||||| || | || |||||||| |||||| ||||||||||||||||||  ||| |||| |||||||| ||    
T  6679816 gagaagaggagagaaaagagaaaatgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaaga 6679717  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||||||||    
T  6679716 tgtctatgtatcataa 6679701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 18520866 - 18520979
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||  ||||||||| ||||||||||| || | |||||||| || |||||| |||||||||||||||||| |||| |||| ||||||||||     
T  18520866 gagaagaggagataaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 18520965  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  18520966 tgtctatgtatcat 18520979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 2252150 - 2252265
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| |||||||||| ||| ||||||| || | ||  || ||||||||||| ||||||||||||||||||||||| |||| |||||||||||    
T  2252150 gagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagga 2252249  T
Q  112 tgtctatgtatcataa 127  Q
    ||| ||||||||||||    
T  2252250 tgtttatgtatcataa 2252265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 35785317 - 35785204
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| |||| |||||| |||| ||||| || || |||||| ||||||||||||||||||  ||| |||| ||||||||||     
T  35785317 gagaagatgagagaaaagagaaagtgtgattgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggg 35785218  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  35785217 tgtctatgtatcat 35785204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 36732924 - 36733037
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| || | |||||||| |  |||||| |||||||||||||||||| |||| |||| | ||||||||     
T  36732924 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctacctaaggg 36733023  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  36733024 tgtctatgtatcat 36733037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 40145525 - 40145412
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| || | |||||||| || |||||| ||||||||||| ||| || |||| |||| ||||||||||     
T  40145525 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccacctaaggg 40145426  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  40145425 tgtctatgtatcat 40145412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 35943877 - 35943989
Alignment:
Q  15 aagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgt 114  Q
    |||| ||||||||||||||| ||||||||||  |||| ||||| || || |||||| ||||||||||||||||||  | | |||| |||||||||| |||    
T  35943877 aagaggagaggaaagagaaagtgtgcttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaagggtgt 35943976  T
Q  115 ctatgtatcataa 127  Q
    |||||||||||||    
T  35943977 ctatgtatcataa 35943989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 3921247 - 3921362
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| |||||||||| ||| ||||||| || | ||  || ||||||||||| ||||||||||||||||||||||| |||| ||||||||||     
T  3921247 gagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggg 3921346  T
Q  112 tgtctatgtatcataa 127  Q
    ||| ||||||||||||    
T  3921347 tgtttatgtatcataa 3921362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 26720634 - 26720519
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  |||| ||||||||| ||||||||||| |||| || ||| |||| |||||| ||||| ||| ||||| || |||| |||| |||||||||||    
T  26720634 gagaagagaagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaagga 26720535  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||||||||    
T  26720534 tgtctatgtatcataa 26720519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 26990383 - 26990268
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  |||| ||||||||| ||||||||||| |||| || ||| |||| |||||| ||||| ||| ||||| || |||| |||| |||||||||||    
T  26990383 gagaagagaagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccacctaagga 26990284  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||||||||    
T  26990283 tgtctatgtatcataa 26990268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 14831932 - 14831819
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||  ||| ||||| ||||||||||| |||| |||||||| || |||||| ||||| |||||||||||| |||| |||| |||||||||      
T  14831932 gagaagaggagaaaaaaaagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagag 14831833  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  14831832 tgtctatgtatcat 14831819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 21370121 - 21370016
Alignment:
Q  13 agaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggat 112  Q
    |||||| |||||||||||||||||||| |||||| || | |||||||||||||||||| |||||| |||||||          |||| ||||||||||||    
T  21370121 agaagatgagaggaaagagaaaatgtgtttgtgcggggtccacgtgaccacatgtcagatttttgagtgggtg----------tattaccacctaaggat 21370032  T
Q  113 gtctatgtatcataat 128  Q
    ||||||||||||||||    
T  21370031 gtctatgtatcataat 21370016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 13811770 - 13811659
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| |||||  |||||||| ||||||||||| || | |||||||| || |||||| ||||||||||||||||||  | | |||| ||||||||||     
T  13811770 gagaagaggagagagaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccacctaaggg 13811671  T
Q  112 tgtctatgtatc 123  Q
    ||||||||||||    
T  13811670 tgtctatgtatc 13811659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 39688879 - 39688994
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||| ||| |||||||||| ||| ||| ||| || ||||  ||||||||| |||| ||||||||||||||||||||| | |||| |||| |||||     
T  39688879 gagaagaaaagaagaaagagaaagtgtacttatgcggggttcatatgaccacatatcagatttttgtgtgggtgtcaagggatgtattgccacttaaggg 39688978  T
Q  112 tgtctatgtatcataa 127  Q
    ||| ||||||||||||    
T  39688979 tgtttatgtatcataa 39688994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 15409592 - 15409707
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||| | ||||||||||| || | || ||| | || |||||| |||||||||||||||||| |  | ||||  ||||||||||    
T  15409592 gagaagaggagagaaaagagagagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcacctaagga 15409691  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||||||||    
T  15409692 tgtctatgtatcataa 15409707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 31009106 - 31008991
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  |||||||| ||||| ||||||||||| |||| |||||||| || |||||| |||||||||||||||  | |  | ||||  ||||||||||    
T  31009106 gagaagagaagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcacctaagga 31009007  T
Q  112 tgtctatgtatcataa 127  Q
    ||| ||||||||||||    
T  31009006 tgtttatgtatcataa 31008991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 33825320 - 33825419
Alignment:
Q  26 aaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcat 125  Q
    ||||||||| |||||||||| | | ||||| ||| ||| |||||| ||||| |||||||||||||| || |||| ||||||||| ||||||||| |||||    
T  33825320 aaagagaaagtgtgcttgtgtaaggttcacatgaacacgtgtcagatttttatgtgggtgtcaaggagtgtattgccacctaagaatgtctatgcatcat 33825419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 42414284 - 42414397
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| || || ||||| ||| ||||||||||| || | ||| |||| || |||||| |||||||||||||||||| |||| |||| |||||||  |     
T  42414284 gagaagaggaaagaaaagataaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctactgg 42414383  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  42414384 tgtctatgtatcat 42414397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 125
Target Start/End: Original strand, 36875645 - 36875698
Alignment:
Q  72 tttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcat 125  Q
    |||||||||||||||||| |||| |||| |||||||||| ||||||||||||||    
T  36875645 tttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 36875698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 126
Target Start/End: Complemental strand, 10356698 - 10356638
Alignment:
Q  67 tcagctttttgtgtgggtgtcaagggg-tatatttccacctaaggatgtctatgtatcata 126  Q
    |||| |||||||||||||||||| ||| | |||| ||||||||||||||||||||||||||    
T  10356698 tcagatttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtatcata 10356638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 20073498 - 20073611
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||||||| ||||| |||||||||||||| | ||||||  ||| ||  || ||||| |||| ||||||| |||| ||||  || |||| ||    
T  20073498 gagaagaggagaggaaatagaaagtgtgcttgtgcagggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtcatctaatga 20073597  T
Q  112 tgtctatgtatcat 125  Q
    ||||||| ||||||    
T  20073598 tgtctatatatcat 20073611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 2177482 - 2177436
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtg 58  Q
    ||||||| ||||||||||||||||||||||||||  |||| ||||||    
T  2177482 gagaagaggagaggaaagagaaaatgtgcttgtgtgggatccacgtg 2177436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 36208291 - 36208176
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |  | |||| ||||||||||     
T  36208291 gagaagaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattaccacctaaggg 36208192  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||||||||    
T  36208191 tgtctatgtatcataa 36208176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 3434675 - 3434567
Alignment:
Q  17 gaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtct 116  Q
    |||||||| ||||||||| ||||||||||| |||| |||||||| || |||||| |||||||||||||||||| |||| |||| ||||||||||||||||    
T  3434675 gaagagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtct 3434576  T
Q  117 atgtatcat 125  Q
    |||||||||    
T  3434575 atgtatcat 3434567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 3784113 - 3784000
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| |||| |||||||| || |||||| ||||||||||||||||||  | | |||| ||||||||||     
T  3784113 gagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaaggg 3784014  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  3784013 tgtctatgtatcat 3784000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 19329960 - 19329847
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| || | |||||||  || |||||| ||||||||||||||||||  ||| |||| |||||||||||    
T  19329960 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagga 19329861  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  19329860 tgtctatgtatcat 19329847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 12311022 - 12310909
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| || |||||||| ||||||||||||| |||||| |||||||||||||||||| ||||||| ||| | || |  | |||||||||||||||||     
T  12311022 gagaagaggaaaggaaagataaaatgtgcttgttcaggatccacgtgaccacatgtcagatttttgtatggatatcca--gatatatttccacctaaggg 12310925  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||||||||    
T  12310924 tgtctatgtatcataa 12310909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 35522994 - 35522879
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||||||||| ||||||||| ||||||||||| |||| ||  || |||| |||||| ||||||||||||||| ||  ||| |||| |||| ||||||    
T  35522994 gagaagaagagagaaaagagaaagtgtgcttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccacttaagga 35522895  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||||||||    
T  35522894 tgtctatgtatcataa 35522879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 41423800 - 41423685
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| |||| |||||||||||| ||||||| | ||||  ||||||||||||||||| |||||||||  |||||||| ||| |||| ||| |||| ||    
T  41423800 gagaagaggagatgaaagagaaaatatgcttgtacgggatctacgtgaccacatgtcagatttttgtgtaagtgtcaagaggtgtattaccatctaatga 41423701  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||||||||    
T  41423700 tgtctatgtatcataa 41423685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 7389499 - 7389394
Alignment:
Q  20 gagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatg 119  Q
    ||||| ||||||||| ||||||||||| || | |||||||| || |||||| |||||||||||||||||| | || |||| |||||||||| ||||||||    
T  7389499 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatg 7389400  T
Q  120 tatcat 125  Q
    ||||||    
T  7389399 tatcat 7389394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 8080365 - 8080478
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| || | |||||||| || |||||| ||||| ||| |||||||| |||| |||| ||||||||||     
T  8080365 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaaggg 8080464  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  8080465 tgtctatgtatcat 8080478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 38267158 - 38267045
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| || | |||||||| || |||||| |||||||||||||||||| |||| ||||  ||| |||||     
T  38267158 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacataaggg 38267059  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  38267058 tgtctatgtatcat 38267045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 19436178 - 19436282
Alignment:
Q  21 agaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgt 120  Q
    |||| ||||||||| ||||||| ||| |||| |||||||| || |||||| ||||||||||||||||||  ||| ||||  |||||||||||||||||||    
T  19436178 agagaaaagagaaagtgtgcttatgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggatgtctatgt 19436277  T
Q  121 atcat 125  Q
    |||||    
T  19436278 atcat 19436282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 18207297 - 18207183
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| |||| |||||||||| ||||||||||  || |||||||| |||| ||| || ||||||| ||||||||||| ||| |||| ||||||||||     
T  18207297 gagaagaggagatgaaagagaaagtgtgcttgtgtggggttcacgtg-ccacgtgttagatttttgtatgggtgtcaagaggtgtattgccacctaaggt 18207199  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||||||||    
T  18207198 tgtctatgtatcataa 18207183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 46033783 - 46033898
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||||| ||||||||| |  |||| |||||||| |||||| ||||| ||||||||| || |||| |||| ||||||||| |    
T  46033783 gagaagaggagagaaaagagaaaatatgcttgtgcggagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaagaa 46033882  T
Q  112 tgtctatgtatcataa 127  Q
    | ||||||||||||||    
T  46033883 tatctatgtatcataa 46033898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 35137651 - 35137538
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| |||| |||||| || | |||||||| || ||| || |||||||||||||||||| |||| |||| ||||||||||     
T  35137651 gagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 35137552  T
Q  112 tgtctatgtatcat 125  Q
    ||||||| ||||||    
T  35137551 tgtctatttatcat 35137538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 38837335 - 38837222
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| || | |||||||| || |||||| ||||||||| |||||  | |||| |||| ||||||||||     
T  38837335 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccacctaaggg 38837236  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  38837235 tgtctatgtatcat 38837222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 40957825 - 40957712
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||| | |||| |||||||| || |||||| ||||||||||||| |||| | || |||| |||||||||      
T  40957825 gagaagatgagagaaaagagaaagtgtgcttgtacgggatccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccacctaagag 40957726  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  40957725 tgtctatgtatcat 40957712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 36361904 - 36362008
Alignment:
Q  21 agaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgt 120  Q
    |||| ||||||||| ||||||||||  || | |||||||| || |||||| |||||||||||||||||| || | |||| |||||||||| |||||||||    
T  36361904 agagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgt 36362003  T
Q  121 atcat 125  Q
    |||||    
T  36362004 atcat 36362008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 36362135 - 36362031
Alignment:
Q  21 agaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgt 120  Q
    |||| ||||||||| ||||||||||  || | |||||||| || |||||| |||||||||||||||||| || | |||| |||||||||| |||||||||    
T  36362135 agagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgt 36362036  T
Q  121 atcat 125  Q
    |||||    
T  36362035 atcat 36362031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 21234511 - 21234404
Alignment:
Q  20 gagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatg 119  Q
    |||||| |||||||||||||||||||| || | || ||| | || |||||  |||||||||| ||||||| |||| ||||  ||||||||||||||||||    
T  21234511 gagaggtaagagaaaatgtgcttgtgcggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatg 21234412  T
Q  120 tatcataa 127  Q
    ||||||||    
T  21234411 tatcataa 21234404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 22343479 - 22343364
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| |||||||||| ||| ||||||| || | ||  ||  |||||||||| ||||||||||||||||||||||| |||| ||||||||||     
T  22343479 gagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggg 22343380  T
Q  112 tgtctatgtatcataa 127  Q
    ||| ||||||||||||    
T  22343379 tgtttatgtatcataa 22343364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 32564456 - 32564523
Alignment:
Q  60 ccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcataa 127  Q
    ||||||||||| ||||||||||||||||||||||| |||| ||||||||| |||| ||||||||||||    
T  32564456 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagaatgtttatgtatcataa 32564523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 41915859 - 41915744
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| |||||||||| ||| ||||||| || | ||  || ||||||||||| ||||||||| ||||||||||||| |||| ||||||||||     
T  41915859 gagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccacctaaggg 41915760  T
Q  112 tgtctatgtatcataa 127  Q
    ||| ||||||||||||    
T  41915759 tgtttatgtatcataa 41915744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 10343545 - 10343658
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||||||||||||| ||||| | |||||  | ||||  | ||  |||||| |||||||||||||||||||  || |||||||||||||||     
T  10343545 gagaagaggagaggaaagagaaagtgtgcgtctgcagagtccacggaaacatgtgtcagatttttgtgtgggtgtcaagatgtgtatttccacctaaggg 10343644  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  10343645 tgtctatgtatcat 10343658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 127
Target Start/End: Original strand, 46374807 - 46374899
Alignment:
Q  35 atgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcataa 127  Q
    |||||||||||| || | || ||| |||| |||||| ||||||||||||||| || |||| | || |||||||||||||||||||||||||||    
T  46374807 atgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataa 46374899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 26296762 - 26296647
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| |||||||||||| |||||||| || | ||  || |||| | |||| ||||| ||||| ||| || |||||||||  ||||||||||    
T  26296762 gagaagaggagagaaaagagaaaatgcgcttgtgcggggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcacctaagga 26296663  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||||||||    
T  26296662 tgtctatgtatcataa 26296647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 27744291 - 27744373
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggt 94  Q
    ||||||| ||||||| ||||||||||||||| ||  |||| |||||| ||||||||||| ||||||||||||| |||| ||||    
T  27744291 gagaagaggagaggatagagaaaatgtgcttatgagggatccacgtggccacatgtcagatttttgtgtgggtatcaaagggt 27744373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 38044302 - 38044200
Alignment:
Q  25 gaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatca 124  Q
    |||||||||| ||| ||||||| || | ||  || | ||||||||| ||||||||||| ||||||||||| |||| |||||||||| ||| |||||||||    
T  38044302 gaaagagaaagtgtacttgtgcggggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatca 38044203  T
Q  125 taa 127  Q
    |||    
T  38044202 taa 38044200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 3694485 - 3694372
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| |||| ||| |||| || |||||| ||||||||||||||| ||  ||| ||||  |||||||||     
T  3694485 gagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcacctaaggg 3694386  T
Q  112 tgtctatgtatcat 125  Q
    ||| ||| ||||||    
T  3694385 tgtgtatatatcat 3694372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 4999496 - 4999609
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||  ||||||||| |||| |||||| || | |||||||| || | |||| ||||||||||||||||||  ||| |||| ||| ||||||     
T  4999496 gagaagaggagataaaagagaaagtgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatctaaggg 4999595  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  4999596 tgtctatgtatcat 4999609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 40846145 - 40846210
Alignment:
Q  62 acatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcataa 127  Q
    |||||| || ||||||||||| ||||||||||| |||| |||||||||||||| ||||||||||||    
T  40846145 acatgttagatttttgtgtggatgtcaaggggtgtattgccacctaaggatgtttatgtatcataa 40846210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 8238331 - 8238215
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccaccta-agg 110  Q
    |||||||  ||| |||||||||| ||| ||||||| || | ||  |||| ||||||||| |||||||||||||||||| |||| |||| ||||||| |||    
T  8238331 gagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctacagg 8238232  T
Q  111 atgtctatgtatcataa 127  Q
     ||| ||||||||||||    
T  8238231 gtgtttatgtatcataa 8238215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 39255906 - 39256020
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| |||| |||||||||| ||| ||||||  |  | |||||| |||| |||||| ||||||| ||||| ||||| ||| |||| ||||||||||     
T  39255906 gagaagaggagatgaaagagaaagtgttcttgtgtggagtccacgtg-ccacgtgtcagatttttgtatgggtatcaagtggtgtattgccacctaaggt 39256004  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||||||||    
T  39256005 tgtctatgtatcataa 39256020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 2318225 - 2318338
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| |||| |||||||||| | ||||| ||  || | |||||||||||| ||||| ||||||||||||||||||| ||| | || ||||||| ||     
T  2318225 gagaagatgagatgaaagagaaagtatgcttatgtcgggtccacgtgaccacacgtcagatttttgtgtgggtgtcaagaggtgtcttgccacctatggt 2318324  T
Q  112 tgtctatgtatcat 125  Q
    |||  |||||||||    
T  2318325 tgttaatgtatcat 2318338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 31735995 - 31735887
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| |||| || ||| |||| |||       |||||||||||| || | || |||| |||||||||||    
T  31735995 gagaagaggagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgt-------ttgtgtgggtgttaaagagtgtattgccacctaagga 31735903  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||||||||    
T  31735902 tgtctatgtatcataa 31735887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 35468837 - 35468950
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| || |||||||||||| |||| ||||||||| | ||| ||  ||||| | || ||||| ||||||||||||  | | |||| ||| |||||||    
T  35468837 gagaagaggataggaaagagaaagtgtgtttgtgcagggtccacatggtcacatattagatttttatgtgggtgtcaaatgatgtattgccatctaagga 35468936  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  35468937 tgtctatgtatcat 35468950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 16374806 - 16374886
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggg 92  Q
    ||||| |||||| |||||||||  ||||||||||   ||| ||||||||||| |||||| ||||||||||| |||||||||    
T  16374806 gagaaaaagagatgaaagagaatgtgtgcttgtgtgagatccacgtgaccacgtgtcagatttttgtgtggatgtcaaggg 16374886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 7728024 - 7727909
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| |||| ||||| ||| ||||||| || | ||  |||||||||||||| ||||| ||||  ||||||| ||| |||| ||||||||||     
T  7728024 gagaagagaagaagaaacagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccacctaaggg 7727925  T
Q  112 tgtctatgtatcataa 127  Q
    ||| ||||||||||||    
T  7727924 tgtttatgtatcataa 7727909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 32951475 - 32951588
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| || | |||||||| || ||| || ||||||||||| ||| || || | ||||  || |||||      
T  32951475 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatctaagag 32951574  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  32951575 tgtctatgtatcat 32951588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 9e-33; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 31976366 - 31976251
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| || |||| |||||||| |||||| ||||||||||||||| || ||||||||| |||||||||||    
T  31976366 gagaagaggagagaaaagagaaagtgtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccacctaagga 31976267  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||||||||    
T  31976266 tgtctatgtatcataa 31976251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 32869796 - 32869685
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| || | |||||||| || |||||| |||||||||||||||||| |||| |||| ||||||||||     
T  32869796 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 32869697  T
Q  112 tgtctatgtatc 123  Q
    ||||||||||||    
T  32869696 tgtctatgtatc 32869685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 22880640 - 22880753
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| || | |||||||| || ||||||  ||||||||||||||||| |||| |||| ||||||||||     
T  22880640 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccacctaaggg 22880739  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  22880740 tgtctatgtatcat 22880753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 17598672 - 17598559
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| || | |||||||| || |||||| ||||||||||||||||||  | | |||| ||||||||||     
T  17598672 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccacctaaggg 17598573  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  17598572 tgtctatgtatcat 17598559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 11427736 - 11427621
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccaccta--ag 109  Q
    ||||||| ||||| ||||||||| ||||||||||| |||| |||||||| || |||||| |||||||||||||||||| || | |||| |||||||  ||    
T  11427736 gagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagag 11427637  T
Q  110 gatgtctatgtatcat 125  Q
    | ||||||||||||||    
T  11427636 ggtgtctatgtatcat 11427621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 15508006 - 15508121
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| |||||||||| ||| ||||||| || | ||  || ||||||||||| ||||||||||||||||||||||| |||| ||||||||||     
T  15508006 gagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggg 15508105  T
Q  112 tgtctatgtatcataa 127  Q
    ||| ||||||||||||    
T  15508106 tgtttatgtatcataa 15508121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 15990024 - 15990139
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| |||||||||| ||| ||||||| || | ||  || ||||||||||| ||||||||||||||||||||||| |||| ||||||||||     
T  15990024 gagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggg 15990123  T
Q  112 tgtctatgtatcataa 127  Q
    ||| ||||||||||||    
T  15990124 tgtttatgtatcataa 15990139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 30341342 - 30341457
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| |||||||||| ||| ||||||| || | ||  || ||||||||||| ||||||||||||||||||||||| |||| ||||||||||     
T  30341342 gagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggg 30341441  T
Q  112 tgtctatgtatcataa 127  Q
    ||| ||||||||||||    
T  30341442 tgtttatgtatcataa 30341457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 12732600 - 12732487
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| |||| |||||||||||||||||| ||  |||| ||| |  |||| |||||| |||||||||||||||||| |  |||||| |||| |||| |    
T  12732600 gagaagaggagatgaaagagaaaatgtgcttatgtgggatccacatagccacgtgtcagatttttgtgtgggtgtcaatgattatattgccacttaagaa 12732501  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  12732500 tgtctatgtatcat 12732487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 31953012 - 31953125
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| |||||||||| |||| |||||   | | ||| ||| |||||||||| ||||| ||||||||||||||||| |||| |||||||||||    
T  31953012 gagaagagaagatgaaagagaaagtgtgtttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaagga 31953111  T
Q  112 tgtctatgtatcat 125  Q
    ||||||| ||||||    
T  31953112 tgtctatctatcat 31953125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 946494 - 946383
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| |||||| | || ||||| ||||||| |  |||||| |||||| || |||||||| |||| ||||  ||||||||||    
T  946494 gagaagaggagagaaaagagaaagtgtgctagagcgggatttacgtgactaggtgtcagatttttgggtaggtgtcaaagggtgtattatcacctaagga 946395  T
Q  112 tgtctatgtatc 123  Q
    ||||||||||||    
T  946394 tgtctatgtatc 946383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 6209447 - 6209560
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| |||||| |||| || | |||||||| || || ||| |||||||||| |||||||   || |||| ||||||||||     
T  6209447 gagaagaggagagaaaagagaaagtgtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccacctaaggg 6209546  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  6209547 tgtctatgtatcat 6209560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 13 - 125
Target Start/End: Complemental strand, 15832694 - 15832582
Alignment:
Q  13 agaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggat 112  Q
    |||||| ||||  |||||||||||||  ||||||||||| |||||||| || |||||  ||||||||||||||||||  | | ||||  ||||||| | |    
T  15832694 agaagaggagaaaaaagagaaaatgtatttgtgcaggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaatgatttattgtcacctaaaggt 15832595  T
Q  113 gtctatgtatcat 125  Q
    |||||||||||||    
T  15832594 gtctatgtatcat 15832582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 28536521 - 28536581
Alignment:
Q  65 tgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcat 125  Q
    |||||| ||||||||||||||||||||| | |||| |||||||||||||| ||||||||||    
T  28536521 tgtcagatttttgtgtgggtgtcaagggttgtattgccacctaaggatgtttatgtatcat 28536581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 31110743 - 31110856
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  |||| ||||||||| |||||||||||||| | || |||   || |||||| |||||||| |  |||||| |||| |||| |||||||||||    
T  31110743 gagaagagtagagaaaagagaaagtgtgcttgtgcagggtccatgtggttacgtgtcagatttttgtgag--tgtcaaagggtgtattgccacctaagga 31110840  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||||||||    
T  31110841 tgtctatgtatcataa 31110856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 4231666 - 4231551
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| |||||||||| ||| ||||||| || | ||  || |||| |||||| |||||||||||||| |||||||| |||| |||||||| ||    
T  4231666 gagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccacctaatga 4231567  T
Q  112 tgtctatgtatcataa 127  Q
    ||| |||| |||||||    
T  4231566 tgtttatgaatcataa 4231551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 23128112 - 23128186
Alignment:
Q  15 aagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaa 89  Q
    |||| ||||| ||||||||| ||||||||||  |||| |||||||| || |||||| ||||||||||||||||||    
T  23128112 aagaggagagaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaa 23128186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 30870132 - 30870058
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgt 86  Q
    ||||||| ||||||||||||||||||||||||||| || | || |||||||||||| || ||||| | |||||||    
T  30870132 gagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgttagatttttatatgggtgt 30870058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 126
Target Start/End: Original strand, 9379707 - 9379808
Alignment:
Q  25 gaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatca 124  Q
    ||||||||||||||| |||||   ||| ||| || |||| |||||  ||||||| ||||||||||||| | ||||  || ||||||||||||||||||||    
T  9379707 gaaagagaaaatgtgtttgtgtgagatccacatggccacgtgtcaaatttttgtatgggtgtcaagggatgtattgtcatctaaggatgtctatgtatca 9379806  T
Q  125 ta 126  Q
    ||    
T  9379807 ta 9379808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 29857945 - 29857832
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  |||| ||||||||| ||||||| ||| |||| ||||| || || |||||| ||||||||||||||| ||  ||| |||| ||| |||| |     
T  29857945 gagaagagaagagaaaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaagg 29857846  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  29857845 tgtctatgtatcat 29857832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 31109385 - 31109488
Alignment:
Q  15 aagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgt 114  Q
    |||| ||||| ||||||||| ||| ||| ||| || |  ||||||| || |||||| ||||||||||| |||||| |||| |||| |||||||||| |||    
T  31109385 aagaggagagaaaagagaaagtgtacttttgcggggtctacgtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaagggtgt 31109484  T
Q  115 ctat 118  Q
    ||||    
T  31109485 ctat 31109488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 22422052 - 22422113
Alignment:
Q  64 atgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcat 125  Q
    |||||||  |||||| || |||||||| | | |||| |||||||||||||||||||||||||    
T  22422052 atgtcagaattttgtatgagtgtcaagagatctattgccacctaaggatgtctatgtatcat 22422113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 6034162 - 6034049
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| |||| |||||||| ||||||||| |||||||||||||||||| |||| |||| ||||||||||     
T  6034162 gagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 6034063  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  6034062 tgtctatgtatcat 6034049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 50052410 - 50052523
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||||||||||||| ||||||||||| || | |||||||| || |||||| |||||||||||||||||| |||| |||| |||||||||||    
T  50052410 gagaagaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagga 50052509  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  50052510 tgtctatgtatcat 50052523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 50526153 - 50526266
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||||||| |||||  |||||||||| | || ||||||||||| |||||| |||||||||||||||||| |||| |||| |||||||| ||    
T  50526153 gagaagaggagaggaaatagaaagcgtgcttgtgcggaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaga 50526252  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  50526253 tgtctatgtatcat 50526266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 48183031 - 48183144
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| || | |||||||| || |||||| |||||||||||||||||| |||| |||| |||| |||||     
T  48183031 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgtaaggg 48183130  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  48183131 tgtctatgtatcat 48183144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 50813874 - 50813989
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| |||||||||| ||| ||||||| || ||||  |||||||||||||| ||||||||||||||||||||||| |||| |||||||||      
T  50813874 gagaagagaagaagaaagagaaagtgtacttgtgcggggttcatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccacctaagag 50813973  T
Q  112 tgtctatgtatcataa 127  Q
    ||| ||||||||||||    
T  50813974 tgtttatgtatcataa 50813989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 480429 - 480542
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||| | || | |||||||| || |||||| |||||||||||||||||| |||| ||||  |||||||||     
T  480429 gagaagaggagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaaggg 480528  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  480529 tgtctatgtatcat 480542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 11511444 - 11511557
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  |||| ||||||||| ||||||||||| || | |||||||| || |||||| ||||| |||||||||||| |||| |||| ||||||||||     
T  11511444 gagaagagaagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaaggg 11511543  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  11511544 tgtctatgtatcat 11511557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 41236465 - 41236352
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| || | |||||||| || |||||| ||||||||||| ||||||  ||| |||| ||||||||||     
T  41236465 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccacctaaggg 41236366  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  41236365 tgtctatgtatcat 41236352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 40574897 - 40574782
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||| | |||| || ||  |  | |||||| |||||||||||||||||| |||| |||| |||||||||||    
T  40574897 gagaagaggagagaaaagagaaagtgtgcttgttcgggatccatgtagcagcgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagga 40574798  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||||||||    
T  40574797 tgtctatgtatcataa 40574782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 55475309 - 55475194
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| |||||||||| ||| ||| |||||| | ||  || ||||||||||| |||||||||||||||||| |||| |||| |||||||||||    
T  55475309 gagaagagaagaagaaagagaaagtgtacttatgcagggtccatatggccacatgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagga 55475210  T
Q  112 tgtctatgtatcataa 127  Q
    ||| ||||||||||||    
T  55475209 tgtttatgtatcataa 55475194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 29240004 - 29239891
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||||||||||||| ||||||||||  || | |||||||| || ||| || ||||||||||| ||||||  ||| |||| ||||||||||     
T  29240004 gagaagaggagaggaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccacctaaggg 29239905  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  29239904 tgtctatgtatcat 29239891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 42044349 - 42044462
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| || | |||||||| || |||||| |||||||||||||||  | || | |||| ||||||||||     
T  42044349 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccacctaaggg 42044448  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  42044449 tgtctatgtatcat 42044462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 56300147 - 56300224
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaa 89  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||  |||||||||||||| ||||||||||| ||||||    
T  56300147 gagaagaggagaggaaagagaaagtgtgtttgtgcaggattcatatgaccacatgtcagatttttgtgtggatgtcaa 56300224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 19670698 - 19670813
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| |||||||||| ||| ||||||| || | ||  || ||||||||||| |||||||||| |||||||||||| |||| ||||||||||     
T  19670698 gagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggg 19670797  T
Q  112 tgtctatgtatcataa 127  Q
    ||| ||||||||||||    
T  19670798 tgtttatgtatcataa 19670813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 29547989 - 29548056
Alignment:
Q  60 ccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcataa 127  Q
    ||||||||||| ||||||||||||||||||||| | |||| |||||||||||||| ||||||||||||    
T  29547989 ccacatgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataa 29548056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 31910310 - 31910195
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| || | || ||| | |  |||||| |||||||||||||||||| | || ||||  ||||||||||    
T  31910310 gagaagatgagagaaaagagaaagtgtgcttgtgcggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcacctaagga 31910211  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||||||||    
T  31910210 tgtctatgtatcataa 31910195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 32767063 - 32766961
Alignment:
Q  25 gaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatca 124  Q
    |||||||||| ||| |||||||||| | ||  || ||||||||||| ||||||| ||||||||||||||| |||| |||||||||  ||| |||||||||    
T  32767063 gaaagagaaagtgtacttgtgcagggtccatatggccacatgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgtttatgtatca 32766964  T
Q  125 taa 127  Q
    |||    
T  32766963 taa 32766961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 3481772 - 3481659
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| | ||||||||||||| ||||||||||  || | |||||||| |  |||||| |||||||||||||||||| | || |||| |||||||| |     
T  3481772 gagaagatgggaggaaagagaaagtgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaagg 3481673  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  3481672 tgtctatgtatcat 3481659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 24995089 - 24995202
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||||||||||||||| || | |||||||| || |||||  ||||| |||||||||||| |||| |||| ||| ||||||     
T  24995089 gagaagaggagagaaaagagaaaatgtgcttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgccatctaaggg 24995188  T
Q  112 tgtctatgtatcat 125  Q
    |||| || ||||||    
T  24995189 tgtccatatatcat 24995202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 29234227 - 29234340
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| || | |||||||| || |||||| ||||||||  ||| |||| |||| |||| ||| ||||||     
T  29234227 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatctaaggg 29234326  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  29234327 tgtctatgtatcat 29234340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 54473515 - 54473628
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||| ||| ||||||||||| || | |||||||| || ||| || ||||||||||||||||||  ||| ||||  |||||||||     
T  54473515 gagaagaggagagaaaagataaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcacctaaggg 54473614  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  54473615 tgtctatgtatcat 54473628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 48647708 - 48647823
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||||||||||||| ||||||||||| |  | ||||||||||| ||| || ||||| ||||||||| ||| ||| ||||   |||||||||    
T  48647708 gagaagaggagaggaaagagaaattgtgcttgtgcggagtccacgtgaccacgtgttagatttttatgtgggtgttaagaggtgtattgttacctaagga 48647807  T
Q  112 tgtctatgtatcataa 127  Q
    ||| ||||| ||||||    
T  48647808 tgtttatgtgtcataa 48647823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 17983725 - 17983823
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagg 110  Q
    |||||||  ||| |||||||||| ||| ||||||| || | ||  || ||||||||||| ||||||||||||||||||||||| |||| ||||||||||    
T  17983725 gagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 17983823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 47986313 - 47986211
Alignment:
Q  25 gaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatca 124  Q
    |||||||||| ||| ||||||| || | ||  || ||||||||||| ||||||||||| ||||||||| | |||| |||||||||| ||| |||||||||    
T  47986313 gaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatca 47986214  T
Q  125 taa 127  Q
    |||    
T  47986213 taa 47986211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 55079744 - 55079811
Alignment:
Q  60 ccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcataa 127  Q
    ||||||||||| ||||||| ||||||||||| ||| |||| |||||||||| ||| ||||||||||||    
T  55079744 ccacatgtcagatttttgtatgggtgtcaagaggtgtattgccacctaagggtgtttatgtatcataa 55079811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 18769037 - 18769103
Alignment:
Q  20 gagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgt 86  Q
    |||| ||||||||||||||| |||||  ||||| || |||||||||||||| |||||||||||||||    
T  18769037 gagatgaaagagaaaatgtgtttgtgtgggatttacatgaccacatgtcagatttttgtgtgggtgt 18769103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 41824000 - 41823926
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgt 86  Q
    ||||||||||||| ||||||||| ||||||||||| || | || ||||| || |||||| |||||||||||||||    
T  41824000 gagaagaagagagaaaagagaaagtgtgcttgtgcggggtccatgtgactacgtgtcagatttttgtgtgggtgt 41823926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 23608353 - 23608240
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||  ||||||||| ||||||||||  |  |||||||||| || |||||| ||||||||||||||||||  ||| ||||  || ||||||     
T  23608353 gagaagaggagataaaagagaaagtgtgcttgtgtggagttcacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgtcatctaaggg 23608254  T
Q  112 tgtctatgtatcat 125  Q
    ||||||| ||||||    
T  23608253 tgtctatatatcat 23608240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 8343193 - 8343260
Alignment:
Q  60 ccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcataa 127  Q
    ||||||||||| ||||| ||| |||||||| || | |||| |||||||||||||| ||||||||||||    
T  8343193 ccacatgtcagatttttatgtaggtgtcaaaggatgtattgccacctaaggatgtttatgtatcataa 8343260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 29977990 - 29977890
Alignment:
Q  25 gaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatca 124  Q
    |||||||||| ||||||||||  || | ||  |||| || |||||| ||||||||||||||| ||||||| |||| ||||||| || | | |||||||||    
T  29977990 gaaagagaaagtgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgtatca 29977891  T
Q  125 t 125  Q
    |    
T  29977890 t 29977890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 18924525 - 18924592
Alignment:
Q  60 ccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcataa 127  Q
    ||||||||||| ||||||||||| | ||||||||| |||| |||||||||| | | |||| |||||||    
T  18924525 ccacatgtcagatttttgtgtggatatcaaggggtgtattgccacctaagggtatttatggatcataa 18924592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 28480250 - 28480365
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| |||| ||| |||||| |||| |||||  || | ||| |||| ||||||||| |||||||||| |||| |||  || ||||  |||||||||     
T  28480250 gagaagaggagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggt 28480349  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||| ||||    
T  28480350 tgtctatgtattataa 28480365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 28481125 - 28481240
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| |||| ||| |||||| |||| |||||  || | ||| |||| ||||||||| |||||||||| |||| |||  || ||||  |||||||||     
T  28481125 gagaagaggagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggt 28481224  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||| ||||    
T  28481225 tgtctatgtattataa 28481240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 28482000 - 28482115
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| |||| ||| |||||| |||| |||||  || | ||| |||| ||||||||| |||||||||| |||| |||  || ||||  |||||||||     
T  28482000 gagaagaggagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggt 28482099  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||| ||||    
T  28482100 tgtctatgtattataa 28482115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 127
Target Start/End: Original strand, 44536773 - 44536842
Alignment:
Q  57 tgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcataa 127  Q
    |||||||||||||| ||||||||||| |||||| |||| |||| ||||||||   ||| ||||||||||||    
T  44536773 tgaccacatgtcagatttttgtgtggatgtcaa-gggtgtattgccacctaaaagtgtttatgtatcataa 44536842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 911 - 1024
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||||||||||||| ||||||||||| ||||||||||||| || |||||| ||||||||||| ||| || |||| |||| |||||||| ||    
T  911 gagaagaggagaggaaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaaga 1010  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  1011 tgtctatgtatcat 1024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 911 - 1024
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||||||||||||| ||||||||||| ||||||||||||| || |||||| ||||||||||| ||| || |||| |||| |||||||| ||    
T  911 gagaagaggagaggaaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccacctaaaga 1010  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  1011 tgtctatgtatcat 1024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 5957948 - 5957835
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||||||||||||| |||| |||||| |||| |||||||| || |||||| |||||||||||||||||| |||| |||| ||||||||| |    
T  5957948 gagaagaggagaggaaagagaaagtgtgattgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagaa 5957849  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  5957848 tgtctatgtatcat 5957835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 37038597 - 37038484
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||||||| ||||| ||||||||||| |||| |||||||| || |||||| |||||||||||||||||| |||| |||| |||||||| ||    
T  37038597 gagaagaggagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaga 37038498  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  37038497 tgtctatgtatcat 37038484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 34012278 - 34012391
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| |||| |||||||| || |||||  |||||||||||||||||| |||| |||| ||||||||||     
T  34012278 gagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccacctaaggg 34012377  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  34012378 tgtctatgtatcat 34012391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 10621069 - 10621184
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| ||||  | ||| | || |||||| |||||||||||||||||| |||| |||| |||||||||||    
T  10621069 gagaagaggagagaaaagagaaagtgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaagga 10621168  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||||||||    
T  10621169 tgtctatgtatcataa 10621184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 15258911 - 15259026
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| |||||||||||||||||||||||||||||| | |||||||||||||||||| ||||| ||||| |||| |||| | |||| ||| |||||      
T  15258911 gagaagaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgccatctaagag 15259010  T
Q  112 tgtctatgtatcataa 127  Q
    | ||||||||||||||    
T  15259011 tatctatgtatcataa 15259026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 43414563 - 43414678
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| |||| || |||||||| ||| || |||||||||||||||||| |||| | || ||| |||||||    
T  43414563 gagaagaggagagaaaagagaaagtgtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatctaagga 43414662  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||||||||    
T  43414663 tgtctatgtatcataa 43414678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 1179922 - 1180035
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| | || ||| |||| || |||||| |||||||||||||||||| |||| |||| ||||||||||     
T  1179922 gagaagaggagagaaaagagaaagtgtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaggg 1180021  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  1180022 tgtctatgtatcat 1180035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 12831165 - 12831052
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| || | |||||||| || |||||| |||||||||||||||||| |||| ||||  |||||||||     
T  12831165 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacctaaggg 12831066  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  12831065 tgtctatgtatcat 12831052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 14548040 - 14547929
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| || | |||||||| || |||||| ||||||||||||||||||  ||| |||| ||||||||||     
T  14548040 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaggg 14547941  T
Q  112 tgtctatgtatc 123  Q
    ||||||||||||    
T  14547940 tgtctatgtatc 14547929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 34307334 - 34307219
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| |||||||||| ||| ||||||| || ||||  || ||||||||||| ||||||||||||||||||||||| |||| ||||||||||     
T  34307334 gagaagagaagaagaaagagaaagtgtacttgtgcggggttcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggg 34307235  T
Q  112 tgtctatgtatcataa 127  Q
    ||| ||||||||||||    
T  34307234 tgtttatgtatcataa 34307219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 15197448 - 15197338
Alignment:
Q  15 aagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgt 114  Q
    |||| ||||| ||||||||| ||||||||||| || | |||||||| || |||||| |||||||||||||||||| |||| |||| |||||||||  |||    
T  15197448 aagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagagtgt 15197349  T
Q  115 ctatgtatcat 125  Q
    |||||||||||    
T  15197348 ctatgtatcat 15197338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 504103 - 504216
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||  ||||||||||| || | |||||||| || |||||| ||||||||||||||||||  ||| |||| ||||||||||     
T  504103 gagaagatgagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggg 504202  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  504203 tgtctatgtatcat 504216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 4854845 - 4854958
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| |||||||||||||| | || ||| |||||| |||| ||||| ||| ||||| || |||| |||| |||||||||||    
T  4854845 gagaagaggagagaaaagagaaagtgtgcttgtgcagggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccacctaagga 4854944  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  4854945 tgtctatgtatcat 4854958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 88
Target Start/End: Complemental strand, 38229546 - 38229470
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtca 88  Q
    |||||||  |||||||||||||||||||||||| ||| || |||||||||||||||||| |||||||||||||||||    
T  38229546 gagaagagaagaggaaagagaaaatgtgcttgtacagaatccacgtgaccacatgtcagatttttgtgtgggtgtca 38229470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 16383495 - 16383380
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| |||||||||| ||| ||||||| || | ||  || ||||||||||| ||||||||||||||||||||||| |||| ||||||||||     
T  16383495 gagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggg 16383396  T
Q  112 tgtctatgtatcataa 127  Q
    ||| ||||||||||||    
T  16383395 tgtttatgtatcataa 16383380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 40423925 - 40424038
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| || | ||| |||| || |||||| ||||||||||| |||||| |||| |||| ||||||||||     
T  40423925 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaaggg 40424024  T
Q  112 tgtctatgtatcat 125  Q
    | ||||||||||||    
T  40424025 tatctatgtatcat 40424038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 10284613 - 10284728
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| || |||||||||||| ||||||||||| || | |||||||| || |||||  |||||||||||||||||| | || ||||  ||| |||||     
T  10284613 gagaagatgaaaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcacttaaggg 10284712  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||||||||    
T  10284713 tgtctatgtatcataa 10284728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 8841414 - 8841512
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagg 110  Q
    ||||||| ||||||||||||||| ||||||||||| || | |||||||| || ||| || |||||||||||||||||| |||| || | ||||||||||    
T  8841414 gagaagaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagg 8841512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 12 - 86
Target Start/End: Complemental strand, 9122303 - 9122229
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgt 86  Q
    ||||||| ||||| ||||||||| ||||||||||| |||| |||||||| ||||||||| |||||||||||||||    
T  9122303 gagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgt 9122229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 127
Target Start/End: Original strand, 15048178 - 15048278
Alignment:
Q  26 aaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcat 125  Q
    ||||||||| ||||||||||| || | || ||| | || |||||| ||||||||||| |||||| |||| |||| |||||||||||||||||||||||||    
T  15048178 aaagagaaagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgg-tgtcaaagggtgtattgccacctaaggatgtctatgtatcat 15048276  T
Q  126 aa 127  Q
    ||    
T  15048277 aa 15048278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 23122587 - 23122692
Alignment:
Q  20 gagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatg 119  Q
    ||||| ||||||||| ||||||| ||| || | |||||||| || |||||| ||||||||||||||||||  ||| |||| |||| ||||| ||||||||    
T  23122587 gagagaaaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacttaagggtgtctatg 23122686  T
Q  120 tatcat 125  Q
    ||||||    
T  23122687 tatcat 23122692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 44507069 - 44507182
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| | ||||||| | || | |||||||| || |||||| ||||||||||||||| || | || |||| ||||||||||     
T  44507069 gagaagatgagagaaaagagaaagtatgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaaggg 44507168  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  44507169 tgtctatgtatcat 44507182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 16056383 - 16056498
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| |||||||||| ||| ||||||| || | ||  || ||||||||||| ||||||||||||||||||||| | ||||  ||| ||||||    
T  16056383 gagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataagga 16056482  T
Q  112 tgtctatgtatcataa 127  Q
    ||| ||||||||||||    
T  16056483 tgtttatgtatcataa 16056498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 24307775 - 24307890
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| |||||||||| ||| ||||||| || | ||  || |||||| |||| ||||||||||||||||||||| | |||| ||||||||||     
T  24307775 gagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgccacctaaggg 24307874  T
Q  112 tgtctatgtatcataa 127  Q
    ||| ||||||||||||    
T  24307875 tgtttatgtatcataa 24307890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 127
Target Start/End: Complemental strand, 32032829 - 32032728
Alignment:
Q  25 gaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatca 124  Q
    |||||||||| ||| |||||||||||| ||  || ||||||||||| ||||||||||| |||||| || | |||| |||||||||| ||| |||||||||    
T  32032829 gaaagagaaagtgtacttgtgcaggatccatatggccacatgtcagatttttgtgtggatgtcaa-ggatgtattgccacctaagggtgtttatgtatca 32032731  T
Q  125 taa 127  Q
    |||    
T  32032730 taa 32032728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 20074924 - 20075029
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  |||||||||||||| |||||||||||||| | ||||||        |||  ||||| |||||||||||| | || |||| |||||||||||    
T  20074924 gagaagagaagaggaaagagaaagtgtgcttgtgcagggtccacgtg--------tcacatttttatgtgggtgtcaaagagtgtattgccacctaagga 20075015  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  20075016 tgtctatgtatcat 20075029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 24307699 - 24307632
Alignment:
Q  60 ccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcataa 127  Q
    |||||| |||| |||||||||||||||||| || | |||| |||||||||| ||| ||||||||||||    
T  24307699 ccacatatcagatttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcataa 24307632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 30479504 - 30479571
Alignment:
Q  60 ccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcataa 127  Q
    ||||||||||| ||||| ||||| |||||| |||| |||| |||||||||| ||| ||||||||||||    
T  30479504 ccacatgtcagatttttatgtggatgtcaaagggtgtattgccacctaagggtgtttatgtatcataa 30479571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 127
Target Start/End: Original strand, 14055615 - 14055689
Alignment:
Q  53 cacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcataa 127  Q
    |||||||| |||||| || ||||||||||| |||||||| || ||||  ||||||||| |||| |||||||||||    
T  14055615 cacgtgactacatgtaagatttttgtgtggatgtcaaggagtgtattgtcacctaagggtgtcaatgtatcataa 14055689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 17443943 - 17443828
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| |||||||||| |||  |||||  || | ||| |||| ||||||||| |||||||||| |||| |||  || ||||  |||||||||     
T  17443943 gagaagagaagatgaaagagaaagtgtctttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattgtcacctaaggt 17443844  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||||||||    
T  17443843 tgtctatgtatcataa 17443828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 42221633 - 42221520
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| |||| |||||||||| |||||||||   || | ||  |||  || |||||| |||||||||||||||| |||  | ||||  ||||||||||    
T  42221633 gagaagatgagatgaaagagaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcacctaagga 42221534  T
Q  112 tgtctatgtatcat 125  Q
    ||| ||||||||||    
T  42221533 tgtatatgtatcat 42221520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 3e-29; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 51898665 - 51898778
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||||||| ||||| ||||||||||| |||| |||||||| || |||||| |||||||||||||||||| |||| |||| |||||||| ||    
T  51898665 gagaagaggagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaaga 51898764  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  51898765 tgtctatgtatcat 51898778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 32813365 - 32813250
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| || | || |||||||| |||||| ||||||||||||||| || |||| |||| |||||||||||    
T  32813365 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaagga 32813266  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||||||||    
T  32813265 tgtctatgtatcataa 32813250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 37649316 - 37649203
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| |||| |||| ||||||||||| | |||||||||||||| |||||| |||||||||||||||||| | || |||| |||||||| ||    
T  37649316 gagaagaggagagaaaagggaaagtgtgcttgtgcggaattcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaaaga 37649217  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  37649216 tgtctatgtatcat 37649203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 47452302 - 47452415
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| |||| |||||||| || ||| || |||||||||||||||||| |||| |||| ||||||||||     
T  47452302 gagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccacctaaggg 47452401  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  47452402 tgtctatgtatcat 47452415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 2582033 - 2581920
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||| ||||| ||||||||||| || | |||||||| || |||||| |||||||||||||||||| |||| |||| ||||||||||     
T  2582033 gagaagaggagagaaaaaagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 2581934  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  2581933 tgtctatgtatcat 2581920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 9474858 - 9474971
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| |||| |||||| || | |||||||| || |||||| |||||||||||||||||| |||| |||| ||||||||||     
T  9474858 gagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 9474957  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  9474958 tgtctatgtatcat 9474971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 27564717 - 27564830
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| || | |||||||  || |||||| ||||||||||||||||||  ||| |||| |||||||||||    
T  27564717 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaagga 27564816  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  27564817 tgtctatgtatcat 27564830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 44548358 - 44548471
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||||||||| ||||||||| ||||||||||| || | |||||||| || |||||| ||||||||||||| ||||  ||| |||| |||||||| ||    
T  44548358 gagaagaagagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccacctaaaga 44548457  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  44548458 tgtctatgtatcat 44548471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 3000437 - 3000324
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||| | || | |||||||| || |||||| |||||||||||||||||| |||| |||| ||||||||||     
T  3000437 gagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 3000338  T
Q  112 tgtctatgtatcat 125  Q
    ||| ||||||||||    
T  3000337 tgtttatgtatcat 3000324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 6260988 - 6260873
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| |||| |||| ||||||||||||| ||| || | ||||||||||||||| || ||||| |||||||||  |||||| |||| |||||||||||    
T  6260988 gagaagaggagaagaaatagaaaatgtgcttatgcggggtccacgtgaccacatgttagatttttatgtgggtgttcaggggtgtattaccacctaagga 6260889  T
Q  112 tgtctatgtatcataa 127  Q
    | ||||| ||||||||    
T  6260888 tatctatctatcataa 6260873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 44454097 - 44453982
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||||||||| ||| ||||||||||  |||| ||||| |||||||||||| ||||||||||||| ||||| | | |||| |||| ||| |     
T  44454097 gagaagatgagaggaaagaaaaagtgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgccacttaaagg 44453998  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||||||||    
T  44453997 tgtctatgtatcataa 44453982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 50590982 - 50591097
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| |||||||||| ||| ||||||| || | ||  || ||||||||||| ||||||||||||||||||||||| |||| ||||||||||     
T  50590982 gagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaaggg 50591081  T
Q  112 tgtctatgtatcataa 127  Q
    ||| ||||||||||||    
T  50591082 tgtttatgtatcataa 50591097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 8346373 - 8346483
Alignment:
Q  15 aagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgt 114  Q
    |||| ||||| ||||||||| |||||||||||||| | |||||||| || |||||| ||||||||||||||||||  ||| |||| |||||||| | ||     
T  8346373 aagaggagagaaaagagaaagtgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtga 8346472  T
Q  115 ctatgtatcat 125  Q
    |||||||||||    
T  8346473 ctatgtatcat 8346483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 38595272 - 38595159
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||| | || | |||||||| || |||||| |||||||||||||||||| |||| |||| |||||||| |     
T  38595272 gagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaagg 38595173  T
Q  112 tgtctatgtatcat 125  Q
    ||| ||||||||||    
T  38595172 tgtttatgtatcat 38595159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 5958982 - 5959097
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| |||||||||| ||| ||||||| || | ||  |||||||||||||| ||||||||||||||||||| ||| |||| |||| |||||     
T  5958982 gagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccacttaaggg 5959081  T
Q  112 tgtctatgtatcataa 127  Q
    ||| ||||||||||||    
T  5959082 tgtttatgtatcataa 5959097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 41608523 - 41608590
Alignment:
Q  60 ccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcataa 127  Q
    ||||||||||| |||||||||| |||||||||||| |||| |||||||||||||| ||||||||||||    
T  41608523 ccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccacctaaggatgtttatgtatcataa 41608590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 38632303 - 38632416
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||| ||| ||||||||||| || | |||||||| || |||||| ||||||||||| ||| ||  ||| |||| ||||||||||     
T  38632303 gagaagaggagagaaaagaaaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccacctaaggg 38632402  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  38632403 tgtctatgtatcat 38632416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 48716264 - 48716377
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| || || ||||| ||| ||||||||||| || | |||||||| || |||||| ||||||||||| ||||||  ||| |||| ||||||||||     
T  48716264 gagaagaggaaagaaaagataaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccacctaaggg 48716363  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  48716364 tgtctatgtatcat 48716377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 50630576 - 50630463
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| || | |||||||| || |||||| |||||||||||||  ||| || | |||| ||||||||||     
T  50630576 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccacctaaggg 50630477  T
Q  112 tgtctatgtatcat 125  Q
    | ||||||||||||    
T  50630476 tatctatgtatcat 50630463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 92
Target Start/End: Complemental strand, 48489418 - 48489338
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggg 92  Q
    ||||||| | ||| ||| ||||||||||||||||| |||| |||||||||||||||||| ||||||||||| |||| ||||    
T  48489418 gagaagaggtgagaaaatagaaaatgtgcttgtgcgggatccacgtgaccacatgtcagatttttgtgtggatgtccaggg 48489338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 26440847 - 26440728
Alignment:
Q  17 gaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtct 116  Q
    |||||||| ||||||||| ||||||| ||| |||| || ||| |||| |||||| ||||||||||||||| || |||| ||||  || ||||||||||||    
T  26440847 gaagagagaaaagagaaagtgtgcttatgcgggatccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtct 26440748  T
Q  117 atgtatcataa-tcatttaa 135  Q
    || |||| ||| ||||||||    
T  26440747 atctatcctaactcatttaa 26440728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 45044542 - 45044657
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  |||| |||||||||||||| |||||| || | || ||| | ||||||||| ||||||| ||||||||||  ||| |||| |||||||||||    
T  45044542 gagaagagaagagaaaagagaaaatgtgtttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccacctaagga 45044641  T
Q  112 tgtctatgtatcataa 127  Q
      | ||||||||||||    
T  45044642 aatgtatgtatcataa 45044657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 43242 - 43137
Alignment:
Q  20 gagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatg 119  Q
    ||||| ||||||||| ||||||||||| |  | |||||||| || |||||| |||||||||||||||||| || | ||||  | ||||||  ||||||||    
T  43242 gagagaaaagagaaagtgtgcttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctcctaagactgtctatg 43143  T
Q  120 tatcat 125  Q
    ||||||    
T  43142 tatcat 43137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 26274546 - 26274437
Alignment:
Q  16 agaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtc 115  Q
    ||||||||| ||||| ||| ||| |||||||||||| |||||||| |  |||||| ||||| ||||| ||||||  | | |||| |||| ||||| ||||    
T  26274546 agaagagagaaaagaaaaagtgtacttgtgcaggatccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtc 26274447  T
Q  116 tatgtatcat 125  Q
    ||||||||||    
T  26274446 tatgtatcat 26274437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 41758923 - 41758810
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| |||| |||||| || | || ||||| || |||||| ||||||||||| |||||| |||| |||| |||  ||| |     
T  41758923 gagaagaggagagaaaagagaaagtgtgtttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccatttaatgg 41758824  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  41758823 tgtctatgtatcat 41758810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 99
Target Start/End: Complemental strand, 13414879 - 13414792
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatt 99  Q
    ||||||| || || ||||||||||||||||||||  || | |||||||| || ||| || |||||||||||||||||| |||| ||||    
T  13414879 gagaagatgatagaaaagagaaaatgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtatt 13414792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 11152360 - 11152472
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||||||| |||||  |||||||||| || |  || |||| || |||||| ||||||||||| |||| | |||| |||| ||||||||||     
T  11152360 gagaagaggagaggaaaaagaaagcgtgcttgtgcggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccacctaagg- 11152458  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||| ||||    
T  11152459 tgtctatgtttcat 11152472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 23597081 - 23597186
Alignment:
Q  20 gagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatg 119  Q
    ||||| ||||| ||| |||| ||||||| | |  ||||| |||| |||||| ||||| ||||||| |||| | || |||| |||||||| ||||||||||    
T  23597081 gagagaaaagataaagtgtgtttgtgcaaggtcaacgtggccacgtgtcagatttttatgtgggtatcaaagagtgtattgccacctaatgatgtctatg 23597180  T
Q  120 tatcat 125  Q
    ||||||    
T  23597181 tatcat 23597186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 3302568 - 3302628
Alignment:
Q  65 tgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcat 125  Q
    |||||| |||||||||||||||| |||  ||||||  ||||||||||||| ||||||||||    
T  3302568 tgtcagatttttgtgtgggtgtccaggaatatattgtcacctaaggatgtatatgtatcat 3302628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 49811509 - 49811624
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattc-acgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagg 110  Q
    ||||||| ||||| ||||||||| ||||||||||| ||| || |  || | || |||||| ||||||||||| ||||||  ||| ||||  |||||||||    
T  49811509 gagaagaggagagaaaagagaaagtgtgcttgtgc-ggagtctatatggctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcacctaagg 49811607  T
Q  111 atgtctatgtatcataa 127  Q
    |||||||| ||||||||    
T  49811608 atgtctatctatcataa 49811624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 37926420 - 37926535
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  |||| ||||||||| ||| ||||| | |||| || ||| |||| |||||| ||||| ||||||||| ||  | | |||| |||||||| ||    
T  37926420 gagaagagaagagaaaagagaaagtgtacttgtacgggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgccacctaaaga 37926519  T
Q  112 tgtctatgtatcataa 127  Q
    | ||||||||||||||    
T  37926520 tatctatgtatcataa 37926535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 47748560 - 47748446
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| |||||||||| | | ||||||| |||| ||  || ||||||||||| ||||| | |||||||||| |||| |||| ||||||||||     
T  47748560 gagaagagaagaagaaagagaaagtatacttgtgcgggatccatatggccacatgtcagatttttatatgggtgtcaa-gggtgtattgccacctaaggg 47748462  T
Q  112 tgtctatgtatcataa 127  Q
    | | ||||||||||||    
T  47748461 tatttatgtatcataa 47748446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 5e-28; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 26754813 - 26754698
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||||||||||||||||||||||||| || | || ||||||||||||||| ||||||||||| |||| | |||| |||| ||||||||||     
T  26754813 gagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccacctaaggg 26754714  T
Q  112 tgtctatgtatcataa 127  Q
    |||||||| |||||||    
T  26754713 tgtctatgaatcataa 26754698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 53982129 - 53982016
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| || | |||||||| || |||||| |||||||||||||||||| |||| |||| ||||||||||     
T  53982129 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 53982030  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  53982029 tgtctatgtatcat 53982016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 26141515 - 26141629
Alignment:
Q  13 agaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggat 112  Q
    |||||| ||||| ||||||||| ||||||||||  || | || |||||||| |||||| ||||||||||||||| || |||| |||| ||||||||||||    
T  26141515 agaagaggagagaaaagagaaagtgtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggat 26141614  T
Q  113 gtctatgtatcataa 127  Q
    |||||||||||||||    
T  26141615 gtctatgtatcataa 26141629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 49607529 - 49607419
Alignment:
Q  15 aagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgt 114  Q
    |||| ||||| ||||||||| ||||||||||  |||| |||||||| || |||||| |||||||||||||||||| |||| |||| |||||||||| |||    
T  49607529 aagaggagagaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgt 49607430  T
Q  115 ctatgtatcat 125  Q
    |||||||||||    
T  49607429 ctatgtatcat 49607419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 52629418 - 52629304
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||| | || | |||||||| || |||||| |||||||||||||||||| |||| |||| ||||||||||     
T  52629418 gagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 52629319  T
Q  112 tgtctatgtatcata 126  Q
    |||||||||||||||    
T  52629318 tgtctatgtatcata 52629304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 33644318 - 33644205
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| || | |||||||| || |||||| |||||||||||||||||| |||| |||| ||||| ||||     
T  33644318 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacccaaggg 33644219  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  33644218 tgtctatgtatcat 33644205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 8076511 - 8076398
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||||||||||||| ||||||||||| || | |||||||| || ||| || |||||||||||||||||| |||| || | ||||||||||     
T  8076511 gagaagaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaaggg 8076412  T
Q  112 tgtctatgtatcat 125  Q
    ||| ||||||||||    
T  8076411 tgtttatgtatcat 8076398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 14623821 - 14623934
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| |||||||||| ||||||||||   | | ||| ||| |||||||||| ||||| ||||||||||||||||| |||| |||||||||||    
T  14623821 gagaagagaagatgaaagagaaagtgtgcttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccacctaagga 14623920  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  14623921 tgtctatgtatcat 14623934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 11347904 - 11348019
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||| |||||| | || ||| |||| |||||| ||||||||||| |||||| || | ||||  ||||||||||    
T  11347904 gagaagaggagagaaaagagaaagtgtgcttatgcagggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcacctaagga 11348003  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||||||||    
T  11348004 tgtctatgtatcataa 11348019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 11907488 - 11907374
Alignment:
Q  13 agaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggat 112  Q
    |||||| ||||| ||||||||||||||||||||| || | ||  |||||||||||||| |||||||||| ||||  ||| || ||||  ||||||||| |    
T  11907488 agaagaggagagaaaagagaaaatgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggt 11907389  T
Q  113 gtctatgtatcataa 127  Q
    |||||||||||||||    
T  11907388 gtctatgtatcataa 11907374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 24699936 - 24700049
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||||||||||||| |||| |||| |||| | |||||| |||| || ||| ||||| ||||||||||||  ||| |||| ||| |||||||    
T  24699936 gagaagaggagaggaaagagaaagtgtgtttgtacagggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaactaagga 24700035  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  24700036 tgtctatgtatcat 24700049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 30801715 - 30801828
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||||||||||||||||||||||||  || | ||  |||| ||||||||  ||||||||||||| |||| |||| ||||  |||||||||     
T  30801715 gagaagatgagaggaaagagaaaatgtgcttgtgtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcacctaaggg 30801814  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  30801815 tgtctatgtatcat 30801828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 54868877 - 54868990
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| |||| |||||| || | ||||| || || |||||| ||||||||||||||||||  ||| |||| ||||||||||     
T  54868877 gagaagatgagagaaaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggg 54868976  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  54868977 tgtctatgtatcat 54868990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 48587078 - 48587186
Alignment:
Q  17 gaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtct 116  Q
    |||||||| ||||||||| ||| ||||||| |||| |||||||| || |||||| ||||| ||| |||||||| |||| |||| |||||||||| | |||    
T  48587078 gaagagagaaaagagaaagtgtacttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatct 48587177  T
Q  117 atgtatcat 125  Q
    |||||||||    
T  48587178 atgtatcat 48587186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 20764897 - 20765012
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||| | || | || ||| |||| |||||| ||||||||||||||| || | || |||| |||||||||||    
T  20764897 gagaagatgagagaaaagagaaagtgtgcttgtacggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccacctaagga 20764996  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||| ||||||    
T  20764997 tgtctatgtctcataa 20765012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 33118841 - 33118948
Alignment:
Q  20 gagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatg 119  Q
    ||||||||||||||| |||| || ||  |||| |||||||| || |||||  |||||||||||||||||| |||| ||||  ||||||||| ||||||||    
T  33118841 gagaggaaagagaaagtgtgtttctgagggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatg 33118940  T
Q  120 tatcataa 127  Q
    ||||||||    
T  33118941 tatcataa 33118948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 48375688 - 48375803
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||||||||||||||||||||||||| || | || ||||||||| ||||| ||||||| ||| | |  |||||| ||||  |||||||||     
T  48375688 gagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacacgtcagatttttgtatggattttcaggggtgtattgtcacctaaggg 48375787  T
Q  112 tgtctatgtatcataa 127  Q
    |||||||| |||||||    
T  48375788 tgtctatgaatcataa 48375803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 27714888 - 27714986
Alignment:
Q  27 aagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcat 125  Q
    |||||||| ||||||||||| || | ||| |||| || |||||| |||||||||||||||||| |||| |||| |||||||| | ||||||||||||||    
T  27714888 aagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgtatcat 27714986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 15 - 125
Target Start/End: Complemental strand, 31456804 - 31456694
Alignment:
Q  15 aagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgt 114  Q
    |||| ||||| ||||||||| ||||||||||| || | ||| |||| || |||||| |||||||||||||||||| |||| |||| || |||| || |||    
T  31456804 aagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgcctatgggtgt 31456705  T
Q  115 ctatgtatcat 125  Q
    |||||||||||    
T  31456704 ctatgtatcat 31456694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 17470523 - 17470410
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||  || | |||||||| || |||||| ||||||||||||||| ||  ||| |||| |||||||| |     
T  17470523 gagaagatgagagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccacctaaagg 17470424  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  17470423 tgtctatgtatcat 17470410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 54 - 125
Target Start/End: Original strand, 11095377 - 11095448
Alignment:
Q  54 acgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcat 125  Q
    ||||||| || |||||| |||||||||||||||||| |||| |||| |||||||||| ||||||||||||||    
T  11095377 acgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 11095448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 41189747 - 41189861
Alignment:
Q  13 agaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggat 112  Q
    |||||| ||||| ||||||||| ||||||||||| || | || ||| |||| |||||  ||||| ||||||||||||  | | |||| ||||||||||||    
T  41189747 agaagaggagagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccacctaaggat 41189846  T
Q  113 gtctatgtatcataa 127  Q
    || ||||||||||||    
T  41189847 gtatatgtatcataa 41189861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 13898037 - 13898150
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| |||||||||| ||||||||||   | | ||| ||| ||| |||||| ||||| ||||||||||||||||| |||| |||||||||||    
T  13898037 gagaagagaagatgaaagagaaagtgtgcttgtgtgaggtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaagga 13898136  T
Q  112 tgtctatgtatcat 125  Q
    ||| ||| ||||||    
T  13898137 tgtttatctatcat 13898150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 41080825 - 41080714
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| |||| |||||||||||||||||||||  || | ||| ||||||||| |||| |||||| ||||||||||| |||| | ||| |  |||||||    
T  41080825 gagaagaggagatgaaagagaaaatgtgcttgtg-tgggtccacatgaccacatatcagatttttgcgtgggtgtcaaagggtgt-tttgctactaagga 41080728  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  41080727 tgtctatgtatcat 41080714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 47531975 - 47531868
Alignment:
Q  20 gagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatg 119  Q
    ||||| ||||||||| ||||||||||| || ||||  || |||| |||||| || |||||||| ||| ||  ||| |||| ||| |||||||||||||||    
T  47531975 gagagaaaagagaaagtgtgcttgtgcggggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgccatctaaggatgtctatg 47531876  T
Q  120 tatcataa 127  Q
    ||||||||    
T  47531875 tatcataa 47531868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 51419350 - 51419457
Alignment:
Q  20 gagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatg 119  Q
    ||||| ||||||||| ||||||||||| || |  | ||| |||| |||||| ||||||||||||||| || || | ||||  || |||||||||||||||    
T  51419350 gagagaaaagagaaagtgtgcttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatctaaggatgtctatg 51419449  T
Q  120 tatcataa 127  Q
    ||||||||    
T  51419450 tatcataa 51419457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 1758438 - 1758555
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaa--ggggtatatttccacctaag 109  Q
    ||||||| |||| ||||||||||||||| |||||  |  | ||||| |||| ||||||| ||||||||||||||||||  ||||| |||| | ||||| |    
T  1758438 gagaagaggagatgaaagagaaaatgtgtttgtgtggagtccacgtaaccatatgtcagatttttgtgtgggtgtcaaggggggtgtattgcaacctatg 1758537  T
Q  110 gatgtctatgtatcataa 127  Q
    | || |||||||||||||    
T  1758538 gttgactatgtatcataa 1758555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 25407129 - 25407243
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagcttttt-gtgtgggtgtcaaggggtatatttccacctaagg 110  Q
    ||||||| |||| |||||||||| |||| |||||  |||| ||  ||| ||| |||||| ||||| ||||| ||||||||||||||||| ||||||| ||    
T  25407129 gagaagaggagatgaaagagaaagtgtgtttgtgtgggatccatatgatcacgtgtcagattttttgtgtgtgtgtcaaggggtatattgccacctatgg 25407228  T
Q  111 atgtctatgtatcat 125  Q
     ||| ||||||||||    
T  25407229 ttgtgtatgtatcat 25407243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 35536744 - 35536631
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| ||||||| || |||||||||| | | | ||| ||||||| |||||  ||||| ||||||||||||  ||| |||| |||| ||||||    
T  35536744 gagaagagaagatgaaagaggaagtgtgcttgtgtaaggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgccacataagga 35536645  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  35536644 tgtctatgtatcat 35536631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 36331311 - 36331407
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaa 108  Q
    |||||||  ||| |||||||||| ||| ||||||| || | ||  || ||||||||||| |||||||||||||||||||||||  ||| ||||||||    
T  36331311 gagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgcattgccacctaa 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 128
Target Start/End: Complemental strand, 42823184 - 42823113
Alignment:
Q  57 tgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcataat 128  Q
    |||||||||||||  ||||| ||||||||||||||||| |||| |||| ||| | ||| |||||||||||||    
T  42823184 tgaccacatgtcaaatttttttgtgggtgtcaaggggtgtattaccacataatggtgtttatgtatcataat 42823113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 45058584 - 45058649
Alignment:
Q  61 cacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcataa 127  Q
    |||||||||| ||||| |||||||||||| |||| |||| |||||||||| ||| ||||||||||||    
T  45058584 cacatgtcagatttttatgtgggtgtcaa-gggtgtattgccacctaagggtgtttatgtatcataa 45058649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 8956880 - 8956767
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| ||||||| || |||||||||| | | | ||| ||| ||| |||||  ||||| |||||||||||| || | |||| |||| ||||||    
T  8956880 gagaagagaagatgaaagaggaagtgtgcttgtgtaaggtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgccacataagga 8956781  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  8956780 tgtctatgtatcat 8956767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 35965767 - 35965869
Alignment:
Q  15 aagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgt 114  Q
    |||| ||||||||||||||| ||||||||||||||||        |||| |||||| ||||| |||||||||||| || | ||||  ||| |||||||||    
T  35965767 aagaggagaggaaagagaaagtgtgcttgtgcaggat--------ccacgtgtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgt 35965858  T
Q  115 ctatgtatcat 125  Q
     ||||||||||    
T  35965859 atatgtatcat 35965869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 36331407 - 36331475
Alignment:
Q  59 accacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcataa 127  Q
    |||||||| ||| ||||||||||| |||||||||||  ||| ||| |||||| ||| ||||||||||||    
T  36331407 accacatgccagatttttgtgtggatgtcaaggggtgcattgccatctaagggtgtttatgtatcataa 36331475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 36707410 - 36707519
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| |||||    || |||| ||||| || || |||||| ||||||||||| |||||| |||| ||||  |||||||||     
T  36707410 gagaagaggagagaaaagagaaagtgtgc----gcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcacctaaggg 36707505  T
Q  112 tgtctatgtatcat 125  Q
    | ||||||||||||    
T  36707506 tatctatgtatcat 36707519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 126
Target Start/End: Original strand, 25395363 - 25395429
Alignment:
Q  60 ccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcata 126  Q
    ||||||||||| ||||||||||||| | ||||| | |||  |||| ||||||||| |||||||||||    
T  25395363 ccacatgtcagatttttgtgtgggtattaagggatgtatggccacataaggatgtttatgtatcata 25395429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 9563117 - 9563040
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaa 89  Q
    ||||||| ||||| | ||||||| |||| ||||||||||| |||||||| || |||||| ||||| | ||| ||||||    
T  9563117 gagaagaggagagaagagagaaagtgtgtttgtgcaggatccacgtgactacgtgtcagatttttatatggatgtcaa 9563040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 5e-28; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 26891486 - 26891601
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  |||||||||||||||||||||||| |  | | |||||||||||||||||| |||||||||||||||| |||||| |||| ||||||||||     
T  26891486 gagaagagaagaggaaagagaaaatgtgcttgttcgaggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccacctaaggg 26891585  T
Q  112 tgtctatgtatcataa 127  Q
    || |||||||||||||    
T  26891586 tggctatgtatcataa 26891601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 17473138 - 17473025
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| |||| |||||||| || |||||| |||||||||||||||||| |||| |||| ||| ||||||     
T  17473138 gagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaaggg 17473039  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  17473038 tgtctatgtatcat 17473025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 33436082 - 33436195
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||||||||||||| ||||||||||| || | |||||||| || ||| || |||||||||||||||||| |||| |||| ||||||||||     
T  33436082 gagaagatgagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 33436181  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  33436182 tgtctatgtatcat 33436195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 17819986 - 17820101
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| |||| ||||||||||||||| |||||  || | ||||| |||||||||||| ||||||||||||||||||||||| |||| |||||||  |     
T  17819986 gagaagaggagatgaaagagaaaatgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctatagt 17820085  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||||||||    
T  17820086 tgtctatgtatcataa 17820101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 40613892 - 40613999
Alignment:
Q  20 gagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatg 119  Q
    ||||| ||||||||| ||||||||||| || | || ||| |||| |||||| |||||||||||||||||| |||| |||| |||||||||||||||||||    
T  40613892 gagagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatg 40613991  T
Q  120 tatcataa 127  Q
    ||||||||    
T  40613992 tatcataa 40613999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 9058598 - 9058485
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| || | ||| |||| || |||||| |||||||||||||||||| |||| |||| ||||||||||     
T  9058598 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 9058499  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  9058498 tgtctatgtatcat 9058485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 28863573 - 28863460
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||  ||||||||| ||||||||||| || | |||||||| || |||||| |||||||||||||||||| |||| |||| ||||||||||     
T  28863573 gagaagaggagataaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggg 28863474  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  28863473 tgtctatgtatcat 28863460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 12 - 124
Target Start/End: Complemental strand, 3440097 - 3439985
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||||||||||||||||||||||||| || | ||||| | ||||||| || |||||||||||||||| ||| || |||| ||||||||||     
T  3440097 gagaagaggagaggaaagagaaaatgtgcttgtgcggggtccacgtaatcacatgttagatttttgtgtgggtgtccaggagtgtattgccacctaaggg 3439998  T
Q  112 tgtctatgtatca 124  Q
    |||||| ||||||    
T  3439997 tgtctacgtatca 3439985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 7465717 - 7465830
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||||||||  ||||||||| ||||||||||  || | |||||||| || |||||| |||||||||||||||||| |||| |||| ||| ||||||     
T  7465717 gagaagaagagataaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatctaaggg 7465816  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  7465817 tgtctatgtatcat 7465830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 13438461 - 13438348
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| || | |||||||| || |||||| |||||||||||||||||| || | ||||  |||||||||     
T  13438461 gagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcacctaaggg 13438362  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  13438361 tgtctatgtatcat 13438348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 20700933 - 20700820
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||||||||||||| ||||||| ||| || | |||||||| || |||||| ||||||||| || ||||| |||| |||| |||| ||||||    
T  20700933 gagaagaggagaggaaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacataagga 20700834  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  20700833 tgtctatgtatcat 20700820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 5574479 - 5574583
Alignment:
Q  21 agaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgt 120  Q
    |||| ||||||||| ||||||||||| |||| |||||||| || |||||| ||||| |||||||||||| |||| |||| |||||||||  |||||||||    
T  5574479 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgt 5574578  T
Q  121 atcat 125  Q
    |||||    
T  5574579 atcat 5574583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 125
Target Start/End: Original strand, 10249367 - 10249477
Alignment:
Q  15 aagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgt 114  Q
    |||| ||||| ||||||||| ||||||||||| || | |||||||| || |||||| ||||||||||||||||||  ||| ||||  ||||||||| |||    
T  10249367 aagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaagggtgt 10249466  T
Q  115 ctatgtatcat 125  Q
    |||||||||||    
T  10249467 ctatgtatcat 10249477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 19930802 - 19930915
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| |||| |||||| || | ||| |||| || |||||| ||||||||||| |||||| |||| |||| ||||||||||     
T  19930802 gagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacctaaggg 19930901  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  19930902 tgtctatgtatcat 19930915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 30915581 - 30915468
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||| | || | |||||||| || |||||| ||||| |||||| ||||| |||| |||| ||||||||||     
T  30915581 gagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccacctaaggg 30915482  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  30915481 tgtctatgtatcat 30915468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 32505630 - 32505743
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||| ||||| ||||||||||| || | |||||||| || |||||| ||||||||||||||||||  ||| ||||  |||||||||     
T  32505630 gagaagaggagagaaaatagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcacctaaggg 32505729  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  32505730 tgtctatgtatcat 32505743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 40701596 - 40701483
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| |||| |||||| || | ||||| || || |||||| ||||||||||||||||||  ||| |||| ||||||||||     
T  40701596 gagaagatgagagaaaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccacctaaggg 40701497  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  40701496 tgtctatgtatcat 40701483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 45097717 - 45097832
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| |||||||||| ||| ||||||| || | ||  || ||||||||||| ||||||| ||||||||||||| | |||| |||||||||||    
T  45097717 gagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtatgggtgtcaagggatgtattgccacctaagga 45097816  T
Q  112 tgtctatgtatcataa 127  Q
    ||| ||||||||||||    
T  45097817 tgtttatgtatcataa 45097832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 3738060 - 3737986
Alignment:
Q  13 agaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtc 87  Q
    |||||| ||||||||| ||||||||||||||||| || | ||| |||||||||||||| ||||||||||||||||    
T  3738060 agaagaggagaggaaaaagaaaatgtgcttgtgcggggtccacatgaccacatgtcagatttttgtgtgggtgtc 3737986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 41575256 - 41575142
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattc-acgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagg 110  Q
    ||||||| |||| |||||||||| |||||||||| |||  || || |||||||||||||  ||||||||||  |||||| |||| |||| ||| ||||||    
T  41575256 gagaagaggagatgaaagagaaagtgtgcttgtgtaggggtccacatgaccacatgtcaaatttttgtgtgaatgtcaaagggtgtattaccatctaagg 41575157  T
Q  111 atgtctatgtatcat 125  Q
    |||||||||||||||    
T  41575156 atgtctatgtatcat 41575142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 42257310 - 42257196
Alignment:
Q  13 agaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggat 112  Q
    |||||| ||||| ||||||||| ||||||||||| || | || ||| |||| |||||| ||||| ||||||||||||  | | |||| |||||||| |||    
T  42257310 agaagaggagagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccacctaaagat 42257211  T
Q  113 gtctatgtatcataa 127  Q
    |||||||||||||||    
T  42257210 gtctatgtatcataa 42257196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 28381637 - 28381750
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||||| |  | || ||||| || |||||| |||||||||||||||| |  ||| |||| ||||||||||     
T  28381637 gagaagatgagagaaaagagaaagtgtgcttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccacctaaggg 28381736  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  28381737 tgtctatgtatcat 28381750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 38732472 - 38732357
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  ||| |||||||||| ||| ||||||| || | ||  |||||||||||||| ||||||||||||||||||||| | ||||  ||| |||||     
T  38732472 gagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacataaggg 38732373  T
Q  112 tgtctatgtatcataa 127  Q
    ||| ||||||||||||    
T  38732372 tgtttatgtatcataa 38732357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 43490191 - 43490124
Alignment:
Q  60 ccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcataa 127  Q
    ||||||||||| ||||||||||||||||||||||| ||||  ||||||||| ||| ||||||||||||    
T  43490191 ccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcataa 43490124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 2997469 - 2997567
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagg 110  Q
    |||||||  ||| |||||||||| ||| ||||||| || | ||  || ||||||||||| ||||||||||||||||||||||| |||| ||||||||||    
T  2997469 gagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacctaagg 2997567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 4060803 - 4060690
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||| ||||| ||||||| ||| |||| ||||| || || |||||| ||||||||||| ||||||  ||| ||||  |||||||||     
T  4060803 gagaagatgagagaaaaaagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcacctaaggg 4060704  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  4060703 tgtctatgtatcat 4060690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 33436329 - 33436216
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| || |||||||||||| ||||||||||||   | ||| ||  ||| |||||| ||||| ||||||||||||  ||| |||| ||| |||||||    
T  33436329 gagaagaggataggaaagagaaagtgtgcttgtgcaaagtccacatggtcacgtgtcagatttttatgtgggtgtcaaaaggtgtattgccatctaagga 33436230  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  33436229 tgtctatgtatcat 33436216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 15428725 - 15428837
Alignment:
Q  15 aagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgt 114  Q
    |||| |||| ||||||||||||||| ||| |  || || || || ||||||||||| |||||||||| |||| ||||||| |||  |||| |||||||||    
T  15428725 aagaggagatgaaagagaaaatgtgtttgcgtggggtttacatggccacatgtcagatttttgtgtgagtgttaaggggtgtatggccacataaggatgt 15428824  T
Q  115 ctatgtatcataa 127  Q
     ||||||||||||    
T  15428825 ttatgtatcataa 15428837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 27864809 - 27864709
Alignment:
Q  25 gaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatca 124  Q
    |||||||||| ||||||| ||| || | |||||||  || |||||| ||||||||||| |||||| |||| |||| |||| ||||| |||||||||||||    
T  27864809 gaaagagaaagtgtgcttttgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatca 27864710  T
Q  125 t 125  Q
    |    
T  27864709 t 27864709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 127
Target Start/End: Original strand, 38273132 - 38273239
Alignment:
Q  20 gagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatg 119  Q
    ||||| ||||||||| |||||| |||| || | || ||| | || |||||| ||||||||||||||| || |||| |||| ||| ||||| |||||||||    
T  38273132 gagagaaaagagaaagtgtgctagtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatctaagaatgtctatg 38273231  T
Q  120 tatcataa 127  Q
    ||||||||    
T  38273232 tatcataa 38273239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 13365471 - 13365373
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagg 110  Q
    |||||||  ||| |||||||||| ||| ||||||| || | ||  ||  |||||||||| |||||||||||||||||||||||||||| ||| ||||||    
T  13365471 gagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtatattgccatctaagg 13365373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 53 - 125
Target Start/End: Original strand, 38882837 - 38882908
Alignment:
Q  53 cacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcat 125  Q
    |||||||| || |||||| ||||||||||| |||||| |||| |||| |||||||||| ||||||||||||||    
T  38882837 cacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccacctaagggtgtctatgtatcat 38882908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 2533241 - 2533127
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||  ||||| ||| ||||||||||| || |  | ||| | || |||||| ||||||||||| |||||| || | |||| |||| ||||||    
T  2533241 gagaagaggagataaaagaaaaagtgtgcttgtgcggggtctatgtggctacgtgtcagatttttgtgtgg-tgtcaaaggatgtattgccacttaagga 2533143  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||||||||    
T  2533142 tgtctatgtatcataa 2533127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 127
Target Start/End: Complemental strand, 36168946 - 36168839
Alignment:
Q  20 gagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatg 119  Q
    ||||| ||||||||| | ||||||||| || | || ||| |||| |||||  |||||||||||| || || || | ||||  || |||||||||||||||    
T  36168946 gagagaaaagagaaagtatgcttgtgcggggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatctaaggatgtctatg 36168847  T
Q  120 tatcataa 127  Q
    ||||||||    
T  36168846 tatcataa 36168839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 17823849 - 17823789
Alignment:
Q  65 tgtcagctttttgtgtgggtgtcaaggggtatatttccacctaaggatgtctatgtatcat 125  Q
    |||||| |||||||||||||||  |||  | |||| |||||||||||||| ||||||||||    
T  17823849 tgtcagatttttgtgtgggtgttcaggaatgtattgccacctaaggatgtatatgtatcat 17823789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 17163 - 17092
Alignment:
Q  21 agaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggg 92  Q
    |||||||||||||||||||||||||| || | || ||||||||||||||| ||||||||||| |||| ||||    
T  17163 agaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtcgaggg 17092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 110
Target Start/End: Complemental strand, 152616 - 152518
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagg 110  Q
    |||||||  ||| |||||||||| |||  |||||| |||| ||  |||||||||||||| ||||||||||||||||||||||| |||| ||||| ||||    
T  152616 gagaagagaagaagaaagagaaagtgtatttgtgcgggatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccacccaagg 152518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 10091 - 10206
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    ||||||| ||||| ||||||||| ||||||||| |  | | |||||||| || |||||| ||||| ||||| |||||| || | |||| |||||||| |     
T  10091 gagaagaggagagaaaagagaaagtgtgcttgtacgcggtccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccacctaaagg 10190  T
Q  112 tgtctatgtatcataa 127  Q
    ||||||||||||||||    
T  10191 tgtctatgtatcataa 10206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 4147 - 4034
Alignment:
Q  12 gagaagaagagaggaaagagaaaatgtgcttgtgcaggattcacgtgaccacatgtcagctttttgtgtgggtgtcaaggggtatatttccacctaagga 111  Q
    |||||||  |||| ||||||||| ||||||| ||| |||| ||||| || || |||||| ||||||||||||||| ||  ||| |||| ||| |||| |     
T  4147 gagaagagaagagaaaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatctaaagg 4048  T
Q  112 tgtctatgtatcat 125  Q
    ||||||||||||||    
T  4047 tgtctatgtatcat 4034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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