View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13899_high_69 (Length: 237)
Name: NF13899_high_69
Description: NF13899
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13899_high_69 |
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Alignment Details
Target: chr5 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 2 - 223
Target Start/End: Complemental strand, 34344166 - 34343947
Alignment:
| Q |
2 |
gatttaagatgctttaaatcattaagtctcctttatcataagatgctgcaaagtttattttctccttaacaaacttattctctagggtttattttctcaa |
101 |
Q |
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| T |
34344166 |
gatttaagatgctttaaatcattaagtctcctttatcataagatgatgcaaagtttattttctccttaacaaacttattctcaagggtttattttctcaa |
34344067 |
T |
|
| Q |
102 |
tatcaaaaataatttattgaaatttgaaaacaagaactttactttcaattttttgttacattgagtttataaaatttggattaaatttgttttgattgtg |
201 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
34344066 |
tatcaaaaacaatttattgaaatttgaaaacaagaactttactttcaattttttgttacattgagtttat--aatttggattaaatttgttttgattgtg |
34343969 |
T |
|
| Q |
202 |
ggtttagaggtatttctttgtg |
223 |
Q |
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|||||||||||||||||||||| |
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| T |
34343968 |
ggtttagaggtatttctttgtg |
34343947 |
T |
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