View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13899_high_77 (Length: 212)
Name: NF13899_high_77
Description: NF13899
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13899_high_77 |
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Alignment Details
Target: chr5 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 39259547 - 39259747
Alignment:
| Q |
1 |
agaacaaccagcaacagcccttgaaagaataggaagagattgaagctgagaatgagaaaaatgaatgatcataggcatacaaatacaaacagttgaggtt |
100 |
Q |
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| T |
39259547 |
agaacaaccagcaacagcccttgaaagaataggaagagattgaagctgagaatgagaaaaatgaatgatcataggcatacaaatacaaacagttgaggtt |
39259646 |
T |
|
| Q |
101 |
gttccaccatctaaacccaataaaacaccatctgagacagaaacattgttaatgtcattctcaaattcccatgtttcaccattcctatacctcttcatct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39259647 |
gttccaccatctaaacccaataaaacaccatctgagacagaaacattgttaatgtcattctcaaattcccatgtttcaccattcctatacctcttcatct |
39259746 |
T |
|
| Q |
201 |
c |
201 |
Q |
| |
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| |
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| T |
39259747 |
c |
39259747 |
T |
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