View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13899_low_53 (Length: 309)
Name: NF13899_low_53
Description: NF13899
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13899_low_53 |
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Alignment Details
Target: chr8 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 23937738 - 23937443
Alignment:
| Q |
1 |
tttaaacatagggaagattttgtgcctaatgttttcctaacatctagcactgctgatatcaactagacaaagctacaaaattatattgcataaatatttg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23937738 |
tttaaacatagggaagattttgtgcctaatgttttcctaacatctagcactgctgatatcaactagacaaagctacaaaattatattgcataaatatttg |
23937639 |
T |
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| Q |
101 |
aactgatagctacataaatctaacaaaatatataataaactaagtgtttgattgttaattttctatcaaattgatgttgatggtcacaatagaattatga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
23937638 |
aactgatagctacataaatctaacaaaatatataataaactaagtgtttgattgttaattttctatcaaattgatgttgatggtcactatagaattatga |
23937539 |
T |
|
| Q |
201 |
aaagtacaaagttatgttttatatgttaatagggataagccataaccaccactatccccaccattcatatgccaagtattactcctctttgtctcc |
296 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23937538 |
aaagtacaaagttatgttttatatgttaatagggataagccataaccaccactatccccaccattcatatgccaagtattactcctctttgtctcc |
23937443 |
T |
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