View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1389_low_32 (Length: 263)
Name: NF1389_low_32
Description: NF1389
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1389_low_32 |
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Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 29 - 256
Target Start/End: Complemental strand, 48171580 - 48171353
Alignment:
| Q |
29 |
aaaatgaccacgaaagcagtaggagaaagcatgacgtggatggaagtttaactcagaaaagcagcaaaaaatctgctgcaagagatttaagccagaagag |
128 |
Q |
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| T |
48171580 |
aaaatgaccacgaaagcagtaggagaaagcatgaagtggatggaagtttaactcagaaaagcagcaaaaaatctgctgcaagagatttaagccagaagag |
48171481 |
T |
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| Q |
129 |
cagtaagaaatctacagtaacaaaggatttaagccaaaagagcagtaaaaaatcttctgcaagagttgtaagtcgatcatctcatagcagcagcgatgag |
228 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48171480 |
cagtaagaaatctacggtaacaaaggatttaagccaaaagagcagtaaaaaatcttctgcaagagttgtaagtcgatcatctcatagcagcagcgatgag |
48171381 |
T |
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| Q |
229 |
gagtcacacgatggaggtgttcatctca |
256 |
Q |
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|||||||||||||||||||||| ||||| |
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| T |
48171380 |
gagtcacacgatggaggtgttcttctca |
48171353 |
T |
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