View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1389_low_46 (Length: 227)

Name: NF1389_low_46
Description: NF1389
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1389_low_46
NF1389_low_46
[»] scaffold0365 (1 HSPs)
scaffold0365 (95-227)||(378-510)
[»] chr7 (9 HSPs)
chr7 (95-227)||(45300758-45300890)
chr7 (95-227)||(37467870-37468002)
chr7 (96-227)||(522701-522832)
chr7 (126-227)||(32813218-32813319)
chr7 (135-227)||(4580687-4580779)
chr7 (120-227)||(25676134-25676243)
chr7 (111-222)||(18927380-18927493)
chr7 (177-227)||(2791572-2791622)
chr7 (177-227)||(32542407-32542457)
[»] chr6 (9 HSPs)
chr6 (95-227)||(2525283-2525415)
chr6 (95-227)||(30599134-30599266)
chr6 (95-227)||(25085978-25086110)
chr6 (95-223)||(34782754-34782882)
chr6 (129-227)||(10839757-10839855)
chr6 (129-227)||(29918718-29918816)
chr6 (135-227)||(5059494-5059586)
chr6 (120-227)||(5173113-5173222)
chr6 (120-227)||(5272123-5272232)
[»] chr5 (12 HSPs)
chr5 (95-227)||(2849162-2849294)
chr5 (95-227)||(35858360-35858492)
chr5 (95-227)||(15295822-15295954)
chr5 (95-227)||(10646757-10646889)
chr5 (102-227)||(670737-670862)
chr5 (95-227)||(30985284-30985416)
chr5 (129-227)||(21119273-21119371)
chr5 (111-227)||(41308335-41308453)
chr5 (120-227)||(25104619-25104722)
chr5 (120-227)||(25163712-25163815)
chr5 (179-225)||(7015379-7015425)
chr5 (177-223)||(17815469-17815515)
[»] chr4 (8 HSPs)
chr4 (95-227)||(26497236-26497368)
chr4 (95-227)||(49316252-49316384)
chr4 (95-227)||(36665901-36666033)
chr4 (152-227)||(49965311-49965386)
chr4 (171-227)||(34150930-34150986)
chr4 (111-227)||(16325486-16325603)
chr4 (111-223)||(20254407-20254521)
chr4 (186-223)||(3146387-3146424)
[»] chr3 (10 HSPs)
chr3 (95-227)||(40997420-40997552)
chr3 (95-227)||(21912584-21912716)
chr3 (95-227)||(33050017-33050149)
chr3 (95-227)||(50901399-50901531)
chr3 (112-227)||(19286473-19286588)
chr3 (129-227)||(14539-14637)
chr3 (129-227)||(41949973-41950071)
chr3 (111-227)||(5410052-5410170)
chr3 (111-227)||(45691617-45691735)
chr3 (145-227)||(23459528-23459611)
[»] chr2 (9 HSPs)
chr2 (95-227)||(12371471-12371603)
chr2 (95-227)||(37425880-37426012)
chr2 (95-227)||(42453536-42453668)
chr2 (95-227)||(9305066-9305198)
chr2 (129-227)||(35467068-35467166)
chr2 (146-227)||(35852363-35852444)
chr2 (159-227)||(11709671-11709739)
chr2 (114-227)||(45325995-45326110)
chr2 (146-223)||(41759973-41760051)
[»] chr1 (7 HSPs)
chr1 (95-227)||(14544412-14544544)
chr1 (96-227)||(43055710-43055841)
chr1 (135-227)||(50580995-50581087)
chr1 (111-223)||(33112545-33112659)
chr1 (133-227)||(25700140-25700236)
chr1 (113-227)||(33113170-33113285)
chr1 (111-227)||(41444753-41444871)
[»] scaffold0024 (1 HSPs)
scaffold0024 (95-227)||(92940-93072)
[»] chr8 (15 HSPs)
chr8 (95-227)||(30886867-30886999)
chr8 (96-227)||(23615834-23615965)
chr8 (95-227)||(4594866-4594998)
chr8 (95-227)||(34852831-34852963)
chr8 (95-227)||(31961386-31961518)
chr8 (95-188)||(6576056-6576149)
chr8 (147-227)||(30591553-30591633)
chr8 (95-216)||(21141717-21141833)
chr8 (114-227)||(2378011-2378126)
chr8 (111-227)||(34740399-34740521)
chr8 (148-227)||(14118071-14118151)
chr8 (111-225)||(26758905-26759021)
chr8 (177-227)||(11910412-11910462)
chr8 (177-227)||(11941195-11941245)
chr8 (177-221)||(30273212-30273256)


Alignment Details
Target: scaffold0365 (Bit Score: 129; Significance: 6e-67; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 510 - 378
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  510 caatatgatgcttggagcaaaatacatgagccagtttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 411  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||||||||||||    
T  410 cagtttcttttatttaattaagtttaagggtaa 378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 129; Significance: 6e-67; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 45300758 - 45300890
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45300758 caatatgatgcttggagcaaaatacatgagccagtttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 45300857  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||||||||||||    
T  45300858 cagtttcttttatttaattaagtttaagggtaa 45300890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 37468002 - 37467870
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37468002 caatatgatgcttggagcaaaatacatgagctagtttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 37467903  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||||||||||||    
T  37467902 cagtttcttttatttaattaagtttaagggtaa 37467870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 96 - 227
Target Start/End: Original strand, 522701 - 522832
Alignment:
Q  96 aatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaac 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  522701 aatatgatgcttggagcaaaatacatgagccagtttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaac 522800  T
Q  196 agtttcttttatttaattaagtttaagggtaa 227  Q
    ||||||||||||||||||||||||| ||||||    
T  522801 agtttcttttatttaattaagtttaggggtaa 522832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 126 - 227
Target Start/End: Original strand, 32813218 - 32813319
Alignment:
Q  126 cagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggt 225  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  32813218 cagtttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagtgt 32813317  T
Q  226 aa 227  Q
    ||    
T  32813318 aa 32813319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 4580779 - 4580687
Alignment:
Q  135 ataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4580779 ataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 4580687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 120 - 227
Target Start/End: Complemental strand, 25676243 - 25676134
Alignment:
Q  120 atgagccagtttaagataaaataa-cggcttagatgtgtgcttgtcttt-gtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagt 217  Q
    |||||||||||| ||||||||||| | |||||||||||||||| ||||| |||  | |||||||||||||||||||  ||||||||||||||||||||||    
T  25676243 atgagccagtttgagataaaataagcagcttagatgtgtgcttctctttcgtcgatctctgaaatcgtaaaaacaagtagtttcttttatttaattaagt 25676144  T
Q  218 ttaagggtaa 227  Q
    ||||||||||    
T  25676143 ttaagggtaa 25676134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 111 - 222
Target Start/End: Complemental strand, 18927493 - 18927380
Alignment:
Q  111 gcaaaatacatgagccagtttaagataaaataa-cggcttagatgtgtgcttgtcttt-gtcagtttctgaaatcgtaaaaacaaacagtttcttttatt 208  Q
    |||||||| |||||||| ||| ||||||||||| |||| |||||||||  |||||||| |||  ||| |||||| ||||||||||| | |||||||||||    
T  18927493 gcaaaatatatgagccaatttgagataaaataaacggcctagatgtgtatttgtctttcgtcgttttatgaaattgtaaaaacaaataatttcttttatt 18927394  T
Q  209 taattaagtttaag 222  Q
    ||||||||||||||    
T  18927393 taattaagtttaag 18927380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 2791622 - 2791572
Alignment:
Q  177 tgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  2791622 tgaaatcgtaaaaacaaacattttcttatatttaattaagtttaagggtaa 2791572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 32542407 - 32542457
Alignment:
Q  177 tgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||| |||||||||| || |||||| |||||||||||||||||||||||    
T  32542407 tgaaattgtaaaaacaagcattttcttatatttaattaagtttaagggtaa 32542457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 6e-67; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 2525283 - 2525415
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2525283 caatatgatgcttggagcaaaatacatgagccagtttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 2525382  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||||||||||||    
T  2525383 cagtttcttttatttaattaagtttaagggtaa 2525415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 30599134 - 30599266
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30599134 caatatgatgcttggagcaaaatacatgagccagtttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 30599233  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||||||||||||    
T  30599234 cagtttcttttatttaattaagtttaagggtaa 30599266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 25086110 - 25085978
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25086110 caatatgatgcttggagcaaaatacatgagtcagtttaagataaaatagcagcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 25086011  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||||||||||||    
T  25086010 cagtttcttttatttaattaagtttaagggtaa 25085978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 95 - 223
Target Start/End: Complemental strand, 34782882 - 34782754
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34782882 caatatgatacttggagcaaaatacatgagccagtttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 34782783  T
Q  195 cagtttcttttatttaattaagtttaagg 223  Q
    |||||||||||||||||||||||||||||    
T  34782782 cagtttcttttatttaattaagtttaagg 34782754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 10839757 - 10839855
Alignment:
Q  129 tttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10839757 tttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 10839855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 29918816 - 29918718
Alignment:
Q  129 tttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29918816 tttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 29918718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 135 - 227
Target Start/End: Complemental strand, 5059586 - 5059494
Alignment:
Q  135 ataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5059586 ataaaatagcggcttagatgtgtgtttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 5059494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 227
Target Start/End: Complemental strand, 5173222 - 5173113
Alignment:
Q  120 atgagccagtttaagataaaataa-cggcttagatgtgtgcttgtcttt-gtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagt 217  Q
    |||||||||||| ||||||||||| | || |||||||||| |||||||| |||  | ||||||| |||||||| || ||||||||||||| ||||||||     
T  5173222 atgagccagtttgagataaaataagcagcctagatgtgtgtttgtctttcgtcgatctctgaaaccgtaaaaataagcagtttcttttatgtaattaagg 5173123  T
Q  218 ttaagggtaa 227  Q
    ||||||||||    
T  5173122 ttaagggtaa 5173113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 227
Target Start/End: Complemental strand, 5272232 - 5272123
Alignment:
Q  120 atgagccagtttaagataaaataa-cggcttagatgtgtgcttgtcttt-gtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagt 217  Q
    ||||| || ||| ||||||||||| | ||||||||||||| || ||||| |||  | ||||||| |||||||| ||  |||||||||||| ||||||||     
T  5272232 atgagtcaatttgagataaaataagcagcttagatgtgtgtttatctttcgtcgatctctgaaaccgtaaaaataagtagtttcttttatgtaattaaga 5272133  T
Q  218 ttaagggtaa 227  Q
    ||||||||||    
T  5272132 ttaagggtaa 5272123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 129; Significance: 6e-67; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 2849294 - 2849162
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2849294 caatatgatgcttggagcaaaatacatgagccagtttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 2849195  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||||||||||||    
T  2849194 cagtttcttttatttaattaagtttaagggtaa 2849162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 35858492 - 35858360
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35858492 caatatgatgcttggagcaaaatacatgagccagtttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 35858393  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||||||||||||    
T  35858392 cagtttcttttatttaattaagtttaagggtaa 35858360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 15295822 - 15295954
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15295822 caatatgatgcttggagcaaaatacatgagccagtttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 15295921  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    ||||| |||||||||||||||||||||||||||    
T  15295922 cagttccttttatttaattaagtttaagggtaa 15295954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 10646757 - 10646889
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10646757 caatatgatgcttggagcaaaatacatgagccagtttaagataaaatagcggcttagatgtgtgcttgtcttcgtcagtttctgaaatcgtaaaaacaaa 10646856  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||| ||||||||||||||    
T  10646857 cagtttcttttatttaatgaagtttaagggtaa 10646889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 102 - 227
Target Start/End: Original strand, 670737 - 670862
Alignment:
Q  102 atgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttc 201  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  670737 atgcttggagcaaaatacatgagccaatttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttc 670836  T
Q  202 ttttatttaattaagtttaagggtaa 227  Q
    ||||||||||||||||||||||||||    
T  670837 ttttatttaattaagtttaagggtaa 670862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 30985284 - 30985416
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  30985284 caatatgatgcttggagcaaaatacatgagccagtttaagataaaatagcagcttaaatgtgtacttgtctttgtcagtttctgaaatcgtaaaaacaaa 30985383  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||||||||||||    
T  30985384 cagtttcttttatttaattaagtttaagggtaa 30985416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 21119371 - 21119273
Alignment:
Q  129 tttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21119371 tttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 21119273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 111 - 227
Target Start/End: Original strand, 41308335 - 41308453
Alignment:
Q  111 gcaaaatacatgagccagtttaagataaaataa-cggcttagatgtgtgcttgtctttg-tcagtttctgaaatcgtaaaaacaaacagtttcttttatt 208  Q
    |||||||| ||||||| |||| ||||||| ||| | |||||||||||||||||||||   ||  | ||||||||| |||||||||   ||||||||||||    
T  41308335 gcaaaatatatgagccggtttgagataaagtaagcagcttagatgtgtgcttgtcttccatcgatctctgaaatcataaaaacaagtggtttcttttatt 41308434  T
Q  209 taattaagtttaagggtaa 227  Q
    |||||||||||||||||||    
T  41308435 taattaagtttaagggtaa 41308453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 227
Target Start/End: Complemental strand, 25104722 - 25104619
Alignment:
Q  120 atgagccagtttaagataaaataa-cggcttagatgtgtgcttgtcttt-gtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagt 217  Q
    ||||||||||||||||| |||||| | ||||||||||||| |||||||| |||  | ||||| | ||||||||      |||||||||||||||||||||    
T  25104722 atgagccagtttaagattaaataagcagcttagatgtgtgtttgtctttcgtcgatctctgacaccgtaaaaa------gtttcttttatttaattaagt 25104629  T
Q  218 ttaagggtaa 227  Q
    ||||||||||    
T  25104628 ttaagggtaa 25104619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 227
Target Start/End: Complemental strand, 25163815 - 25163712
Alignment:
Q  120 atgagccagtttaagataaaataa-cggcttagatgtgtgcttgtcttt-gtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagt 217  Q
    ||||||||||||||||| |||||| | ||||||||||||| |||||||| |||  | ||||| | ||||||||      |||||||||||||||||||||    
T  25163815 atgagccagtttaagattaaataagcagcttagatgtgtgtttgtctttcgtcgatctctgacaccgtaaaaa------gtttcttttatttaattaagt 25163722  T
Q  218 ttaagggtaa 227  Q
    ||||||||||    
T  25163721 ttaagggtaa 25163712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 7015379 - 7015425
Alignment:
Q  179 aaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggt 225  Q
    ||||| |||||||||  ||||||||||||||||||||||||||||||    
T  7015379 aaatcataaaaacaagtagtttcttttatttaattaagtttaagggt 7015425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 177 - 223
Target Start/End: Original strand, 17815469 - 17815515
Alignment:
Q  177 tgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagg 223  Q
    |||||||||||||||||||| |||| | |||||||||||||||||||    
T  17815469 tgaaatcgtaaaaacaaacattttcgtatatttaattaagtttaagg 17815515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 129; Significance: 6e-67; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 26497236 - 26497368
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26497236 caatatgatgcttggagcaaaatacatgagccagtttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 26497335  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||||||||||||    
T  26497336 cagtttcttttatttaattaagtttaagggtaa 26497368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 49316384 - 49316252
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49316384 caatatgatgcttggagcaaaatacatgagccagtttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 49316285  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||||||||||||    
T  49316284 cagtttcttttatttaattaagtttaagggtaa 49316252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 36666033 - 36665901
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  36666033 caatatgatgcttggagcaaaatacatgagccagtttaagataaaatagcggtttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 36665934  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||||||||||||    
T  36665933 cagtttcttttatttaattaagtttaagggtaa 36665901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 49965386 - 49965311
Alignment:
Q  152 atgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 227  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49965386 atgtgtgtttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 49965311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 34150930 - 34150986
Alignment:
Q  171 agtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34150930 agtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 34150986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 111 - 227
Target Start/End: Complemental strand, 16325603 - 16325486
Alignment:
Q  111 gcaaaatacatgagccagtttaagataaaataa-cggcttagatgtgtgcttgtcttt-gtcagtttctgaaatcgtaaaaacaaacagtttcttttatt 208  Q
    |||||||| |||||||||||| ||||||||||| | ||| ||||||||| |||||||| ||| || ||| |||||||||||||||  | |||||||||||    
T  16325603 gcaaaatatatgagccagtttgagataaaataagcagct-agatgtgtgtttgtcttttgtcggtctctaaaatcgtaaaaacaagtaatttcttttatt 16325505  T
Q  209 taattaagtttaagggtaa 227  Q
    |||||||||||||||||||    
T  16325504 taattaagtttaagggtaa 16325486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 20254521 - 20254407
Alignment:
Q  111 gcaaaatacatgagccagtttaagataaaataa-cggcttagatgtgtgcttgtcttt-gtcagtttctgaaatcgtaaaaacaaacagtttcttttatt 208  Q
    |||||| | |||| ||||||| ||||||||||| | |||||| ||||| ||||||||| |||  | |||||||||||||||||||  |||||||||||||    
T  20254521 gcaaaagatatgaaccagtttgagataaaataagcagcttaggtgtgtccttgtctttcgtcgatctctgaaatcgtaaaaacaagtagtttcttttatt 20254422  T
Q  209 taattaagtttaagg 223  Q
    |||||||||||||||    
T  20254421 taattaagtttaagg 20254407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 3146424 - 3146387
Alignment:
Q  186 aaaaacaaacagtttcttttatttaattaagtttaagg 223  Q
    ||||| ||||| ||||||||||||||||||||||||||    
T  3146424 aaaaaaaaacaatttcttttatttaattaagtttaagg 3146387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 129; Significance: 6e-67; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 40997420 - 40997552
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40997420 caatatgatgcttggagcaaaatacatgagccagtttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 40997519  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||||||||||||    
T  40997520 cagtttcttttatttaattaagtttaagggtaa 40997552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 21912716 - 21912584
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21912716 caatatgatgtttggagcaaaatacatgagccagtttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 21912617  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||||||||||||    
T  21912616 cagtttcttttatttaattaagtttaagggtaa 21912584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 33050017 - 33050149
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33050017 caatatgatgcttggagcaaaatacatgagccagtttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttatgaaatcgtaaaaacaaa 33050116  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||||||||||||    
T  33050117 cagtttcttttatttaattaagtttaagggtaa 33050149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 50901531 - 50901399
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50901531 caatatgatgcttggagcaaaatacatgagccagtttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 50901432  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    || ||||||||||||||||||||||||||||||    
T  50901431 caatttcttttatttaattaagtttaagggtaa 50901399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 19286473 - 19286588
Alignment:
Q  112 caaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaa 211  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19286473 caaaatacatgagccagtttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaa 19286572  T
Q  212 ttaagtttaagggtaa 227  Q
    ||||||||||||||||    
T  19286573 ttaagtttaagggtaa 19286588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 14637 - 14539
Alignment:
Q  129 tttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14637 tttaagataaaatagcggcttagatgtgtggttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 14539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 129 - 227
Target Start/End: Complemental strand, 41950071 - 41949973
Alignment:
Q  129 tttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41950071 tttaagataaaatagcagcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 41949973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 111 - 227
Target Start/End: Original strand, 5410052 - 5410170
Alignment:
Q  111 gcaaaatacatgagccagtttaagataaaataa-cggcttagatgtgtgcttgtcttt-gtcagtttctgaaatcgtaaaaacaaacagtttcttttatt 208  Q
    |||||||| |||||||||||||||||||||||| |  |||||||||||||||||| || ||| || ||||||||| ||||| |||| |||||||||||||    
T  5410052 gcaaaatatatgagccagtttaagataaaataaacaacttagatgtgtgcttgtcattcgtcggtctctgaaatcctaaaatcaaatagtttcttttatt 5410151  T
Q  209 taattaagtttaagggtaa 227  Q
    |||||||||||||||||||    
T  5410152 taattaagtttaagggtaa 5410170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 111 - 227
Target Start/End: Complemental strand, 45691735 - 45691617
Alignment:
Q  111 gcaaaatacatgagccagtttaagataaaataa-cggcttagatgtgtgcttgtcttt-gtcagtttctgaaatcgtaaaaacaaacagtttcttttatt 208  Q
    |||||||| ||||| |||||| ||||||||||| | ||||| |||| ||||||||||| ||| || | ||||||||||||| |||  |||||||||||||    
T  45691735 gcaaaatatatgagtcagtttgagataaaataagcagcttatatgtatgcttgtctttcgtcggtctatgaaatcgtaaaaccaagtagtttcttttatt 45691636  T
Q  209 taattaagtttaagggtaa 227  Q
    |||||||||||||||||||    
T  45691635 taattaagtttaagggtaa 45691617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 23459528 - 23459611
Alignment:
Q  145 ggcttagatgtgtgcttgtcttt-gtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 227  Q
    ||||||||||| | ||||||||| ||  || | |||||||||||||||||||| |||| | ||||||||||| ||||| |||||    
T  23459528 ggcttagatgtattcttgtctttcgttggtctatgaaatcgtaaaaacaaacactttcgtatatttaattaaatttaaaggtaa 23459611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 6e-67; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 12371603 - 12371471
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12371603 caatatgatgcttggagcaaaatacatgagccagtttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 12371504  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||||||||||||    
T  12371503 cagtttcttttatttaattaagtttaagggtaa 12371471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 37426012 - 37425880
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37426012 caatatgatgcttggagcaaaatacatgagctagtttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 37425913  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||||||||||||    
T  37425912 cagtttcttttatttaattaagtttaagggtaa 37425880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 42453536 - 42453668
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  42453536 caatatgatgcttggagcaaaatacatgagccagtttaagataaaatagcggcttaaatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 42453635  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||||||||||||    
T  42453636 cagtttcttttatttaattaagtttaagggtaa 42453668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 9305066 - 9305198
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9305066 caatacgatgcttggagcaaaatacatgagccagtttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 9305165  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    ||| |||||||||||||||||||||||||||||    
T  9305166 caggttcttttatttaattaagtttaagggtaa 9305198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 129 - 227
Target Start/End: Original strand, 35467068 - 35467166
Alignment:
Q  129 tttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35467068 tttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 35467166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 146 - 227
Target Start/End: Complemental strand, 35852444 - 35852363
Alignment:
Q  146 gcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 227  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35852444 gcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 35852363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 11709671 - 11709739
Alignment:
Q  159 cttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11709671 cttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 11709739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 227
Target Start/End: Complemental strand, 45326110 - 45325995
Alignment:
Q  114 aaatacatgagccagtttaagataaaataa-cggcttagatgtgtgcttgtcttt-gtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaa 211  Q
    ||||| || ||||||||| ||||||||||| | |||| |||||||| |||||||| |||  | || ||||||||||||||||  ||||||||||||||||    
T  45326110 aaatatataagccagtttgagataaaataagcagctttgatgtgtgtttgtctttcgtcgatctccgaaatcgtaaaaacaagtagtttcttttatttaa 45326011  T
Q  212 ttaagtttaagggtaa 227  Q
    ||||||||||||||||    
T  45326010 ttaagtttaagggtaa 45325995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 223
Target Start/End: Original strand, 41759973 - 41760051
Alignment:
Q  146 gcttagatgtgtgcttgtcttt-gtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagg 223  Q
    |||||||| |||| ||||| || |||||| ||||||||||||||| |||  ||||||||||||||||||||||||||||    
T  41759973 gcttagatatgtgattgtcattcgtcagtctctgaaatcgtaaaatcaagtagtttcttttatttaattaagtttaagg 41760051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 6e-67; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 14544412 - 14544544
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14544412 caatatgatgcttggagcaaaatacatgagccagtttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 14544511  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||||||||||||    
T  14544512 cagtttcttttatttaattaagtttaagggtaa 14544544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 96 - 227
Target Start/End: Original strand, 43055710 - 43055841
Alignment:
Q  96 aatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaac 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43055710 aatatgatgcttggagcaaaatacatgagccagtttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaac 43055809  T
Q  196 agtttcttttatttaattaagtttaagggtaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  43055810 agtttcttttatttaattaagtttaagggtaa 43055841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 135 - 227
Target Start/End: Original strand, 50580995 - 50581087
Alignment:
Q  135 ataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50580995 ataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 50581087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 33112659 - 33112545
Alignment:
Q  111 gcaaaatacatgagccagtttaagataaaataa-cggcttagatgtgtgcttgtcttt-gtcagtttctgaaatcgtaaaaacaaacagtttcttttatt 208  Q
    |||||||| |||||||||||| ||||||||||| | ||||| ||||||| |||||||| |||  | || ||||||||||||||||  |||||||||||||    
T  33112659 gcaaaatatatgagccagtttgagataaaataagcagcttatatgtgtgtttgtctttcgtcgatctccgaaatcgtaaaaacaagtagtttcttttatt 33112560  T
Q  209 taattaagtttaagg 223  Q
    |||||||||||||||    
T  33112559 taattaagtttaagg 33112545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 133 - 227
Target Start/End: Original strand, 25700140 - 25700236
Alignment:
Q  133 agataaaataa-cggcttagatgtgtgcttgtcttt-gtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 227  Q
    ||||||||||| | ||||||||||||||||||| || |||||| ||||||||| ||||| |||  ||||||||||||||||||||||||||| ||||    
T  25700140 agataaaataagcagcttagatgtgtgcttgtcattcgtcagtctctgaaatcataaaatcaagtagtttcttttatttaattaagtttaagagtaa 25700236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 113 - 227
Target Start/End: Original strand, 33113170 - 33113285
Alignment:
Q  113 aaaatacatgagccagtttaagataaaataa-cggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaa 211  Q
    |||||| |||| ||||||| ||||||||||| |  |||||||||||||||   || ||| || ||||||||||||||| |||  ||||||||||||||||    
T  33113170 aaaatatatgaaccagtttgagataaaataagcaacttagatgtgtgctttcattcgtcggtctctgaaatcgtaaaatcaagtagtttcttttatttaa 33113269  T
Q  212 ttaagtttaagggtaa 227  Q
    |||| |||| ||||||    
T  33113270 ttaaatttatgggtaa 33113285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 111 - 227
Target Start/End: Complemental strand, 41444871 - 41444753
Alignment:
Q  111 gcaaaatacatgagccagtttaagataaaataa-cggcttagatgtgtgcttgtctttgtcagtt-tctgaaatcgtaaaaacaaacagtttcttttatt 208  Q
    |||||||| ||||| |||||| ||||||| ||| | |||| |||||||| ||||| ||  | | | ||||||||||||||| |||  |||||||||||||    
T  41444871 gcaaaatatatgagtcagtttgagataaagtaagcagcttcgatgtgtgtttgtcattcgctggtctctgaaatcgtaaaatcaagtagtttcttttatt 41444772  T
Q  209 taattaagtttaagggtaa 227  Q
    |||||||||||||||||||    
T  41444771 taattaagtttaagggtaa 41444753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 93072 - 92940
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  93072 caatatgatgcttggagcaaaatacatgagccagtttaagataaaatagcggcttaaatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 92973  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||||||||||||    
T  92972 cagtttcttttatttaattaagtttaagggtaa 92940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 2e-64; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 30886999 - 30886867
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30886999 caatatgatgcttggagcaaaatacatgagctagtttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 30886900  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||||||||||||    
T  30886899 cagtttcttttatttaattaagtttaagggtaa 30886867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 96 - 227
Target Start/End: Original strand, 23615834 - 23615965
Alignment:
Q  96 aatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaac 195  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23615834 aatatgatgcttggagcaaaatacatgagccagtttaagataaaatagctgcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaac 23615933  T
Q  196 agtttcttttatttaattaagtttaagggtaa 227  Q
    ||||||||||||||||||||||||||||||||    
T  23615934 agtttcttttatttaattaagtttaagggtaa 23615965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 95 - 227
Target Start/End: Complemental strand, 4594998 - 4594866
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  4594998 caatatgatgcttggagcaaaatacatgagccagtttaagataaaatagcggcttaaatgtgtgcttgtctttgtcagtttttgaaatcgtaaaaacaaa 4594899  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||||||||||||    
T  4594898 cagtttcttttatttaattaagtttaagggtaa 4594866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 34852831 - 34852963
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34852831 caatatgatgcttggagcaaagtacatgagcaagtttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 34852930  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||||||||||||    
T  34852931 cagtttcttttatttaattaagtttaagggtaa 34852963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 95 - 227
Target Start/End: Original strand, 31961386 - 31961518
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaa 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  31961386 caatatgatgcttggagcaaaatacatgagccagtttaagataaaatagcggcttagatatgtgcttgtctttgtcagtttctgaaatcataaaaacaaa 31961485  T
Q  195 cagtttcttttatttaattaagtttaagggtaa 227  Q
    || ||||||||||||||||||||||||||||||    
T  31961486 caatttcttttatttaattaagtttaagggtaa 31961518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 95 - 188
Target Start/End: Original strand, 6576056 - 6576149
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataacggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaa 188  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  6576056 caatatgatgcttggagcaaaatacatgagccagtttaagataaaatagcggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaa 6576149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 147 - 227
Target Start/End: Original strand, 30591553 - 30591633
Alignment:
Q  147 cttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  30591553 cttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaaacaatttcttttatttaattaagtttaagggtaa 30591633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 21141717 - 21141833
Alignment:
Q  95 caatatgatgcttggagcaaaatacatgagccagtttaagataaaataa-cggcttagatgtgtgcttgtctttgtcagtttctgaaatcgtaaaaacaa 193  Q
    ||||||||||| |||||||||||| |||||||||||| ||||||||||| |||||||||||||||       ||||| || |||||||||||||||||||    
T  21141717 caatatgatgcatggagcaaaatatatgagccagtttgagataaaataagcggcttagatgtgtg------gttgtcggtctctgaaatcgtaaaaacaa 21141810  T
Q  194 acagtttcttttatttaattaag 216  Q
     ||||||||||||||||||||||    
T  21141811 gcagtttcttttatttaattaag 21141833  T

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Target: chr8; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 227
Target Start/End: Complemental strand, 2378126 - 2378011
Alignment:
Q  114 aaatacatgagccagtttaagataaaataa-cggcttagatgtgtgcttgtcttt-gtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaa 211  Q
    ||||| |||||||| ||| ||||||||||| | |||||||||| ||||||||||| |||  | || |||||||| |||||||  ||||||||||||||||    
T  2378126 aaatatatgagccaatttgagataaaataagcagcttagatgtctgcttgtctttcgtcgatctccgaaatcgtgaaaacaagtagtttcttttatttaa 2378027  T
Q  212 ttaagtttaagggtaa 227  Q
    ||||||||||||||||    
T  2378026 ttaagtttaagggtaa 2378011  T

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Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 227
Target Start/End: Complemental strand, 34740521 - 34740399
Alignment:
Q  111 gcaaaatacatgagccagtttaagataaaataa-cggctta----gatgtgtgcttgtctttg-tcagtttctgaaatcgtaaaaacaaacagtttcttt 204  Q
    |||||||| ||||| |||||| ||||||||||| | |||||    |||||||||||||||||  ||  | || ||||| ||||||||||| |||||||||    
T  34740521 gcaaaatagatgagtcagtttgagataaaataagcagcttaattagatgtgtgcttgtctttcatcgatctccgaaattgtaaaaacaaatagtttcttt 34740422  T
Q  205 tatttaattaagtttaagggtaa 227  Q
    |||||||||||||||||||||||    
T  34740421 tatttaattaagtttaagggtaa 34740399  T

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Target: chr8; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 227
Target Start/End: Complemental strand, 14118151 - 14118071
Alignment:
Q  148 ttagatgtgtgcttgtcttt-gtcagtttctgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 227  Q
    ||||||||||||||||| || |||  | ||||||||||||||| |||  ||||||||||||||||||||||||||||||||    
T  14118151 ttagatgtgtgcttgtcattcgtctatctctgaaatcgtaaaatcaagtagtttcttttatttaattaagtttaagggtaa 14118071  T

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Target: chr8; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 111 - 225
Target Start/End: Original strand, 26758905 - 26759021
Alignment:
Q  111 gcaaaatacatgagccagtttaagataaaataa-cggcttagatgtgtgcttgtcttt-gtcagtttctgaaatcgtaaaaacaaacagtttcttttatt 208  Q
    |||||||| |||||||| |||  |||||||||| | |||||||||||||||  ||||| |||  | ||  |||||||||||||||  |||||||||||||    
T  26758905 gcaaaatatatgagccaatttttgataaaataagcagcttagatgtgtgctaatctttcgtcgatctccaaaatcgtaaaaacaagtagtttcttttatt 26759004  T
Q  209 taattaagtttaagggt 225  Q
    |||||||||||||||||    
T  26759005 taattaagtttaagggt 26759021  T

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Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 227
Target Start/End: Original strand, 11910412 - 11910462
Alignment:
Q  177 tgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 227  Q
    ||||||||||||||||| || ||||   |||||||||||||||||||||||    
T  11910412 tgaaatcgtaaaaacaagcattttcgaatatttaattaagtttaagggtaa 11910462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 227
Target Start/End: Complemental strand, 11941245 - 11941195
Alignment:
Q  177 tgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaagggtaa 227  Q
    ||||||||||||||||| || ||||   |||||||||||||||||||||||    
T  11941245 tgaaatcgtaaaaacaagcattttcaaatatttaattaagtttaagggtaa 11941195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 30273256 - 30273212
Alignment:
Q  177 tgaaatcgtaaaaacaaacagtttcttttatttaattaagtttaa 221  Q
    ||||||||||||| |||||| |||| | |||||||||||||||||    
T  30273256 tgaaatcgtaaaagcaaacattttcgtatatttaattaagtttaa 30273212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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