View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13900_low_19 (Length: 413)

Name: NF13900_low_19
Description: NF13900
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13900_low_19
NF13900_low_19
[»] chr5 (5 HSPs)
chr5 (1-223)||(20473359-20473580)
chr5 (96-224)||(31375846-31375977)
chr5 (180-215)||(22036170-22036205)
chr5 (180-215)||(22039396-22039431)
chr5 (180-217)||(43103661-43103698)
[»] chr7 (12 HSPs)
chr7 (1-217)||(18973681-18973896)
chr7 (1-224)||(7570472-7570697)
chr7 (1-224)||(7576887-7577112)
chr7 (96-213)||(6374706-6374822)
chr7 (282-344)||(3200695-3200757)
chr7 (76-213)||(231939-232075)
chr7 (180-215)||(1636700-1636735)
chr7 (180-215)||(5189463-5189498)
chr7 (180-215)||(44672795-44672830)
chr7 (68-102)||(24918379-24918413)
chr7 (69-102)||(2090793-2090826)
chr7 (180-216)||(20436977-20437013)
[»] chr3 (10 HSPs)
chr3 (1-224)||(23049106-23049327)
chr3 (96-223)||(17544573-17544698)
chr3 (96-155)||(43683730-43683790)
chr3 (68-150)||(46542535-46542616)
chr3 (172-223)||(28716501-28716552)
chr3 (138-224)||(6765023-6765106)
chr3 (180-215)||(10557810-10557845)
chr3 (180-223)||(19194052-19194095)
chr3 (138-223)||(6732138-6732220)
chr3 (138-223)||(53190035-53190117)
[»] chr2 (9 HSPs)
chr2 (223-397)||(27188676-27188850)
chr2 (223-397)||(27838490-27838664)
chr2 (1-92)||(3252448-3252540)
chr2 (180-222)||(6276923-6276965)
chr2 (180-217)||(16881605-16881642)
chr2 (180-217)||(17039295-17039332)
chr2 (180-223)||(33749731-33749774)
chr2 (180-215)||(35077228-35077263)
chr2 (180-215)||(35080486-35080521)
[»] scaffold0086 (1 HSPs)
scaffold0086 (96-223)||(24170-24295)
[»] chr1 (7 HSPs)
chr1 (96-213)||(28957245-28957361)
chr1 (115-189)||(28411804-28411876)
chr1 (180-217)||(25662856-25662893)
chr1 (180-223)||(21911039-21911082)
chr1 (180-215)||(28138611-28138646)
chr1 (180-215)||(28141861-28141896)
chr1 (180-217)||(14159063-14159100)
[»] chr8 (7 HSPs)
chr8 (4-119)||(27805468-27805587)
chr8 (93-223)||(2847580-2847715)
chr8 (115-223)||(10649566-10649672)
chr8 (67-151)||(31467955-31468038)
chr8 (179-223)||(33383671-33383715)
chr8 (180-215)||(5952438-5952473)
chr8 (173-213)||(8855083-8855123)
[»] chr4 (7 HSPs)
chr4 (57-94)||(33493575-33493612)
chr4 (121-213)||(21557366-21557456)
chr4 (1-54)||(34855570-34855623)
chr4 (138-224)||(14617662-14617745)
chr4 (180-223)||(25186356-25186399)
chr4 (180-214)||(54900089-54900123)
chr4 (195-223)||(12194783-12194811)
[»] chr6 (2 HSPs)
chr6 (180-224)||(965071-965115)
chr6 (180-223)||(17733248-17733291)
[»] scaffold0884 (1 HSPs)
scaffold0884 (180-224)||(4288-4332)
[»] scaffold0050 (1 HSPs)
scaffold0050 (102-153)||(38512-38563)
[»] scaffold0012 (1 HSPs)
scaffold0012 (180-223)||(157409-157452)
[»] scaffold0005 (1 HSPs)
scaffold0005 (138-224)||(199632-199715)


Alignment Details
Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 20473580 - 20473359
Alignment:
Q  1 tcgaaagacttaatcccttctctaaacacatctcaaaaccgattttattcttca-tcatttatttactttttatgcaatcaaaccaactgcctagtgcaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  20473580 tcgaaagacttaatcccttctctaaacacatctcaaaaccgattttattcttcagtcatttatttactttttatgcaatcaaaccaactgcctagggcaa 20473481  T
Q  100 cccccatttacatacatcctaaatattaatgaaattgctaagtagagattagaacacagtccctgtggattagaattaaattattacttcgatataaatt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||  ||||||||||||||||||||||||||||    
T  20473480 cccccatttacatacatcctaaatattaatgaaattgctaagtagagattaga--acagtccctgtggatatgaattaaattattacttcgatataaatt 20473383  T
Q  200 agtacacttgctaattttttatca 223  Q
    ||| |||||||||||||| |||||    
T  20473382 agtgcacttgctaattttctatca 20473359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 96 - 224
Target Start/End: Original strand, 31375846 - 31375977
Alignment:
Q  96 gcaacccccatttacatacatcctaaatatta-----atgaaattgctaagtagagattagaacacagtccctgtggattagaattaaattattacttcg 190  Q
    |||||||||||||||||| ||||| |||||||     |||||| ||  |||||||||||||||||  |||| |||||||  |||||||||||||||||||    
T  31375846 gcaacccccatttacatatatcctgaatattatattgatgaaactgtcaagtagagattagaaca--gtccttgtggatacgaattaaattattacttcg 31375943  T
Q  191 atataaattagtacacttgctaattttttatcag 224  Q
    ||||||||||||||||||||||||||| ||||||    
T  31375944 atataaattagtacacttgctaattttgtatcag 31375977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 215
Target Start/End: Original strand, 22036170 - 22036205
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaatt 215  Q
    ||||||||||||||||| ||||||||||||||||||    
T  22036170 ttattacttcgatataagttagtacacttgctaatt 22036205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 215
Target Start/End: Original strand, 22039396 - 22039431
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaatt 215  Q
    ||||||||||||||||| ||||||||||||||||||    
T  22039396 ttattacttcgatataagttagtacacttgctaatt 22039431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 217
Target Start/End: Complemental strand, 43103698 - 43103661
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaatttt 217  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  43103698 ttattacttcgatataagttagtacaattgctaatttt 43103661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 179; Significance: 2e-96; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 18973896 - 18973681
Alignment:
Q  1 tcgaaagacttaatcccttctctaaacacatctcaaaaccgattttattcttca-tcatttatttactttttatgcaatcaaaccaactgcctagtgcaa 99  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  18973896 tcgaaagacttaatcccttctttaaacacatctccaaaccgattttattcttcagtcatttatttactttttatgcaatcaaaccaactgcctagggcaa 18973797  T
Q  100 cccccatttacatacatcctaaatattaatgaaattgctaagtagagattagaacacagtccctgtggattagaattaaattattacttcgatataaatt 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||  ||||||||||||||||||||||||||||    
T  18973796 cccccatttacatacatcctaaatattaatgaaattgctaagtagagattaga--acagtccctgtggatacgaattaaattattacttcgatataaatt 18973699  T
Q  200 agtacacttgctaatttt 217  Q
    ||||||||||||||||||    
T  18973698 agtacacttgctaatttt 18973681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 7570472 - 7570697
Alignment:
Q  1 tcgaaagacttaatcccttctctaaacacatctcaaaaccgattttattcttca-tcatttatttactttttatgcaatcaaaccaact---gcctagtg 96  Q
    |||||||||||||||| ||||||||||| || |||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||   |||||| |    
T  7570472 tcgaaagacttaatcctttctctaaacatatttcaaaaccaattttattcttcagtcatttatttactttttatgcaatcaaatcaactactgcctaggg 7570571  T
Q  97 caacccccatttacatacatcctaaatattaatgaaattgctaagtagagattagaacacagtccctgtggattagaattaaattattacttcgatataa 196  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||| ||  |||||||||||||||||||||||||    
T  7570572 caacccccatttacatacatcctaaatattaatgaaatttctaagtagagattaga--acagtccctgtgaatacgaattaaattattacttcgatataa 7570669  T
Q  197 attagtacacttgctaattttttatcag 224  Q
    ||||||||||||||||||||| ||||||    
T  7570670 attagtacacttgctaattttctatcag 7570697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 7576887 - 7577112
Alignment:
Q  1 tcgaaagacttaatcccttctctaaacacatctcaaaaccgattttattcttca-tcatttatttactttttatgcaatcaaaccaact---gcctagtg 96  Q
    |||||||||||||||| ||||||||||| || |||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||   |||||| |    
T  7576887 tcgaaagacttaatcctttctctaaacatatttcaaaaccaattttattcttcagtcatttatttactttttatgcaatcaaatcaactactgcctaggg 7576986  T
Q  97 caacccccatttacatacatcctaaatattaatgaaattgctaagtagagattagaacacagtccctgtggattagaattaaattattacttcgatataa 196  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||| ||  |||||||||||||||||||||||||    
T  7576987 caacccccatttacatacatcctaaatattaatgaaatttctaagtagagattaga--acagtccctgtgaatacgaattaaattattacttcgatataa 7577084  T
Q  197 attagtacacttgctaattttttatcag 224  Q
    ||||||||||||||||||||| ||||||    
T  7577085 attagtacacttgctaattttctatcag 7577112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 96 - 213
Target Start/End: Original strand, 6374706 - 6374822
Alignment:
Q  96 gcaaccccc-atttacatacatcctaaatattaatgaaattgctaagtagagattagaacacagtccctgtggattagaattaaattattacttcgatat 194  Q
    ||||||||| ||||||||||||| | ||||||||||||||||| |||||||||||||||||  |||||| |||||  |||||||||||||||||||||||    
T  6374706 gcaaccccctatttacatacatcttgaatattaatgaaattgccaagtagagattagaaca--gtccctttggatacgaattaaattattacttcgatat 6374803  T
Q  195 aaattagtacacttgctaa 213  Q
    ||||||||| |||||||||    
T  6374804 aaattagtatacttgctaa 6374822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 344
Target Start/End: Complemental strand, 3200757 - 3200695
Alignment:
Q  282 gctatttttggttggttgtgccatactctccgacaagagcaacaagcacattaacctcatatg 344  Q
    ||||||| |||| |||||  |||| |||| |||||||||||||||||||||||||| ||||||    
T  3200757 gctatttctggtcggttgaaccattctcttcgacaagagcaacaagcacattaaccccatatg 3200695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 76 - 213
Target Start/End: Original strand, 231939 - 232075
Alignment:
Q  76 aatcaaaccaactgcct-agtgcaacccccatttacatacatcctaaatattaatgaaattgctaagtagagattagaacacagtccctgtggattagaa 174  Q
    ||||||||||| ||||| |||||| |||||| |||  || ||  | |||||| |||||||||| ||||||| ||||||  |  |||| |||||||   ||    
T  231939 aatcaaaccaattgccttagtgcatcccccaattaattatattttgaatattgatgaaattgccaagtagaaattagagta--gtccttgtggatacaaa 232036  T
Q  175 ttaaattattacttcgatataaattagtacacttgctaa 213  Q
    || ||||||| ||| || |||||||||||||||||||||    
T  232037 tttaattattgctttgaaataaattagtacacttgctaa 232075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 215
Target Start/End: Complemental strand, 1636735 - 1636700
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaatt 215  Q
    ||||||||||||||||| ||||||||||||||||||    
T  1636735 ttattacttcgatataagttagtacacttgctaatt 1636700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 215
Target Start/End: Complemental strand, 5189498 - 5189463
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaatt 215  Q
    ||||||||||||||||| ||||||||||||||||||    
T  5189498 ttattacttcgatataagttagtacacttgctaatt 5189463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 215
Target Start/End: Complemental strand, 44672830 - 44672795
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaatt 215  Q
    ||||||||||||||||| ||||||||||||||||||    
T  44672830 ttattacttcgatataagttagtacacttgctaatt 44672795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 24918379 - 24918413
Alignment:
Q  68 ttttatgcaatcaaaccaactgcctagtgcaaccc 102  Q
    ||||||||||||||||||||||||||| |||||||    
T  24918379 ttttatgcaatcaaaccaactgcctagggcaaccc 24918413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 102
Target Start/End: Original strand, 2090793 - 2090826
Alignment:
Q  69 tttatgcaatcaaaccaactgcctagtgcaaccc 102  Q
    |||||||||||||||||||||||||| |||||||    
T  2090793 tttatgcaatcaaaccaactgcctagggcaaccc 2090826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 20436977 - 20437013
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaattt 216  Q
    ||||||||||||||||| |||||||||||| ||||||    
T  20436977 ttattacttcgatataagttagtacacttgttaattt 20437013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 162; Significance: 2e-86; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 23049106 - 23049327
Alignment:
Q  1 tcgaaagacttaatcccttctctaaacacatctcaaaaccgattttattcttca-tcatttatttactttttatgcaatcaaaccaactgcctagtgcaa 99  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||| ||||    
T  23049106 tcgaaagacttattcccttctctaaacacatctcaaaaccgattttattcttcagtaatttatttactttttatgcaatcaaaccaactgtctagggcaa 23049205  T
Q  100 cccccatttacatacatcctaaatattaatgaaattgctaagtagagattagaacacagtccctgtggattagaattaaattattacttcgatataaatt 199  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||  ||||||||||||||||||||||||||||    
T  23049206 cccc-attttcatacatcctaaatattaatgaaattgctaagtagagattagaata--gtccctgtggatacgaattaaattattacttcgatataaatt 23049302  T
Q  200 agtacacttgctaattttttatcag 224  Q
    |||||||||||||||||| ||||||    
T  23049303 agtacacttgctaattttgtatcag 23049327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 96 - 223
Target Start/End: Complemental strand, 17544698 - 17544573
Alignment:
Q  96 gcaacccccatttacatacatcctaaatattaatgaaattgctaagtagagattagaacacagtccctgtggattagaattaaattattacttcgatata 195  Q
    |||||||||||||||||||||||| |||||| |||||||||  ||||||||||| |||||  |||| |||||||   |||||||||||||||||||||||    
T  17544698 gcaacccccatttacatacatcctgaatattgatgaaattgtcaagtagagattggaaca--gtccttgtggatacaaattaaattattacttcgatata 17544601  T
Q  196 aattagtacacttgctaattttttatca 223  Q
    |||||||||||||||||||||| |||||    
T  17544600 aattagtacacttgctaattttgtatca 17544573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 43683730 - 43683790
Alignment:
Q  96 gcaaccccc-atttacatacatcctaaatattaatgaaattgctaagtagagattagaaca 155  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  43683730 gcaaccccctatttacatacatcctaaatattaataaaattgctaagtagagattagaaca 43683790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 46542535 - 46542616
Alignment:
Q  68 ttttatgcaatcaaaccaactgcctagtgcaacccccatttacatacatcctaaatattaatgaaattgctaagtagagatta 150  Q
    |||||||||| |||||||||||||||| |||||||| ||||| ||||||| |  | ||||||||||||||||| |||| ||||    
T  46542535 ttttatgcaaacaaaccaactgcctagggcaaccccaattta-atacatcttttacattaatgaaattgctaaatagaaatta 46542616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 28716552 - 28716501
Alignment:
Q  172 gaattaaattattacttcgatataaattagtacacttgctaattttttatca 223  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||||| |||||    
T  28716552 gaattatattattacttcgacataaattagtacatttgctaattttgtatca 28716501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 6765106 - 6765023
Alignment:
Q  138 taagtagagattagaacacagtccctgtggattagaattaaattattacttcgatataaattagtacacttgctaattttttatcag 224  Q
    ||||||||||||| ||||  ||||||| |||   ||||||| |||||||| ||||  ||||||||||||||||||||||| ||||||    
T  6765106 taagtagagattaaaaca--gtccctgaggaaacgaattaatttattact-cgattcaaattagtacacttgctaattttctatcag 6765023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 215
Target Start/End: Complemental strand, 10557845 - 10557810
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaatt 215  Q
    ||||||||||||||||| ||||||||||||||||||    
T  10557845 ttattacttcgatataagttagtacacttgctaatt 10557810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 19194052 - 19194095
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaattttttatca 223  Q
    ||||||||||||||||| ||||||||||||| |||||| |||||    
T  19194052 ttattacttcgatataagttagtacacttgcaaattttctatca 19194095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 223
Target Start/End: Original strand, 6732138 - 6732220
Alignment:
Q  138 taagtagagattagaacacagtccctgtggattagaattaaattattacttcgatataaattagtacacttgctaattttttatca 223  Q
    ||||||||||||| ||||  ||||||| |||   ||||||| |||||||| ||||  ||||||||||||||||||||||| |||||    
T  6732138 taagtagagattaaaaca--gtccctgaggaaacgaattaatttattact-cgattcaaattagtacacttgctaattttctatca 6732220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 223
Target Start/End: Original strand, 53190035 - 53190117
Alignment:
Q  138 taagtagagattagaacacagtccctgtggattagaattaaattattacttcgatataaattagtacacttgctaattttttatca 223  Q
    ||||||||||||| ||||  ||||||| |||   ||||||| |||||||| ||||  ||||||||||||||||||||||| |||||    
T  53190035 taagtagagattaaaaca--gtccctgaggaaacgaattaatttattact-cgattcaaattagtacacttgctaattttctatca 53190117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 8e-68; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 223 - 397
Target Start/End: Complemental strand, 27188850 - 27188676
Alignment:
Q  223 agggacagggaggaataagagaaagctaacatgcaggattggtgtgtaagggatttcatgctatttttggttggttgtgccatactctccgacaagagca 322  Q
    |||||| |||||||||||||||||||||||||||| |||  |||||| ||||||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  27188850 agggacggggaggaataagagaaagctaacatgcaagatatgtgtgtgagggatttcatactatttttggttggttgtaccatactctccgacgagagca 27188751  T
Q  323 acaagcacattaacctcatatgactcaatggattgctggattttaacaggatacatgaatgtcatggggtgggat 397  Q
    ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  27188750 acaagcacattgacctcatatgactcaatgggatgctggattttaacaggatacatgaatgtcatggggtgggat 27188676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 223 - 397
Target Start/End: Complemental strand, 27838664 - 27838490
Alignment:
Q  223 agggacagggaggaataagagaaagctaacatgcaggattggtgtgtaagggatttcatgctatttttggttggttgtgccatactctccgacaagagca 322  Q
    |||||| |||||||||||||||||||||||||||| |||  |||||| ||||||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  27838664 agggacggggaggaataagagaaagctaacatgcaagatatgtgtgtgagggatttcatactatttttggttggttgtaccatactctccgacgagagca 27838565  T
Q  323 acaagcacattaacctcatatgactcaatggattgctggattttaacaggatacatgaatgtcatggggtgggat 397  Q
    ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  27838564 acaagcacattgacctcatatgactcaatgggatgctggattttaacaggatacatgaatgtcatggggtgggat 27838490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 3252448 - 3252540
Alignment:
Q  1 tcgaaagacttaatcccttctctaaacacatctcaaaaccgattttattcttca-tcatttatttactttttatgcaatcaaaccaactgcct 92  Q
    ||||||||||||||||  |||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3252448 tcgaaagacttaatcctgtctctaaacatatttcaaaaccgattttattcttcagtcatttatttactttttatgcaatcaaaccaactgcct 3252540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 180 - 222
Target Start/End: Complemental strand, 6276965 - 6276923
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaattttttatc 222  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  6276965 ttattacttcgatataagttagtacacttgctaattttttatc 6276923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 217
Target Start/End: Original strand, 16881605 - 16881642
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaatttt 217  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  16881605 ttattacttcgatataagttagtacacttgctaatttt 16881642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 217
Target Start/End: Original strand, 17039295 - 17039332
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaatttt 217  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  17039295 ttattacttcgatataagttagtacacttgctaatttt 17039332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 33749731 - 33749774
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaattttttatca 223  Q
    ||||||||||||||||| |||||||||||||||| ||| |||||    
T  33749731 ttattacttcgatataagttagtacacttgctaaatttgtatca 33749774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 215
Target Start/End: Original strand, 35077228 - 35077263
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaatt 215  Q
    ||||||||||||||||| ||||||||||||||||||    
T  35077228 ttattacttcgatataagttagtacacttgctaatt 35077263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 215
Target Start/End: Original strand, 35080486 - 35080521
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaatt 215  Q
    ||||||||||||||||| ||||||||||||||||||    
T  35080486 ttattacttcgatataagttagtacacttgctaatt 35080521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 96 - 223
Target Start/End: Original strand, 24170 - 24295
Alignment:
Q  96 gcaacccccatttacatacatcctaaatattaatgaaattgctaagtagagattagaacacagtccctgtggattagaattaaattattacttcgatata 195  Q
    |||||||||||||||||||||||| |||||| |||||||||  |||||||||||||||||  |||| |||||||  ||||||||||||||||||||||||    
T  24170 gcaacccccatttacatacatcctgaatattgatgaaattgtcaagtagagattagaaca--gtccttgtggatacgaattaaattattacttcgatata 24267  T
Q  196 aattagtacacttgctaattttttatca 223  Q
    ||||| |||||||||||||||| |||||    
T  24268 aattaatacacttgctaattttctatca 24295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 2e-37; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 96 - 213
Target Start/End: Original strand, 28957245 - 28957361
Alignment:
Q  96 gcaaccccca-tttacatacatcctaaatattaatgaaattgctaagtagagattagaacacagtccctgtggattagaattaaattattacttcgatat 194  Q
    |||||||||| |||||||||||| | ||||||||||||||||| |||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  28957245 gcaacccccaatttacatacatcttgaatattaatgaaattgccaagtagagattagaaca--gtccctgtggatacgaattaaattattacttcgatat 28957342  T
Q  195 aaattagtacacttgctaa 213  Q
    |||||||||||||||||||    
T  28957343 aaattagtacacttgctaa 28957361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 115 - 189
Target Start/End: Complemental strand, 28411876 - 28411804
Alignment:
Q  115 atcctaaatattaatgaaattgctaagtagagattagaacacagtccctgtggattagaattaaattattacttc 189  Q
    ||||| |||||| |||||||||||||||||||||||||  | |||||| ||||||  ||||| ||||||||||||    
T  28411876 atcctgaatatttatgaaattgctaagtagagattaga--atagtcccggtggatacgaatttaattattacttc 28411804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 217
Target Start/End: Complemental strand, 25662893 - 25662856
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaatttt 217  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  25662893 ttattacttcgatataagttagtacacttgctaatttt 25662856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 21911082 - 21911039
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaattttttatca 223  Q
    ||||| ||||||||||| |||||||||||||||||||| |||||    
T  21911082 ttatttcttcgatataagttagtacacttgctaattttgtatca 21911039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 215
Target Start/End: Complemental strand, 28138646 - 28138611
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaatt 215  Q
    ||||||||||||||||| ||||||||||||||||||    
T  28138646 ttattacttcgatataagttagtacacttgctaatt 28138611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 215
Target Start/End: Complemental strand, 28141896 - 28141861
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaatt 215  Q
    ||||||||||||||||| ||||||||||||||||||    
T  28141896 ttattacttcgatataagttagtacacttgctaatt 28141861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 217
Target Start/End: Complemental strand, 14159100 - 14159063
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaatttt 217  Q
    ||||||||||||||||| |||||||||||| |||||||    
T  14159100 ttattacttcgatataagttagtacacttgttaatttt 14159063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 27805587 - 27805468
Alignment:
Q  4 aaagacttaatcccttctctaaacacatctcaaaaccgattttattcttca-tcatttat---ttactttttatgcaatcaaaccaactgcctagtgcaa 99  Q
    ||||||||||||| ||||||||||| || |||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||||||||||  |||    
T  27805587 aaagacttaatcctttctctaaacatatttcaaaaccgattttattcttcagtcatttataatttactttttatgcaatcaaaccaactgcctaggacaa 27805488  T
Q  100 cccccatttacatacatcct 119  Q
    |||||||||  |||||||||    
T  27805487 cccccattttaatacatcct 27805468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 93 - 223
Target Start/End: Complemental strand, 2847715 - 2847580
Alignment:
Q  93 agtgcaacccccattt-acatacatcctaaatattaatgaaattgctaagtagagattagaacacagtccctgtggattagaat----taaat--tatta 185  Q
    |||||||||||||||| ||||||||||| |||| |||||| ||| |  ||||||  || ||| |||||||||||||||  ||||    |||||  |||||    
T  2847715 agtgcaacccccattttacatacatccttaataataatgacattaccgagtagaagtt-gaa-acagtccctgtggatacgaatcttataaatgttatta 2847618  T
Q  186 cttcgatataaattagtacacttgctaattttttatca 223  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  2847617 cttcgatataagttagtacacttgctaattttctatca 2847580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 115 - 223
Target Start/End: Original strand, 10649566 - 10649672
Alignment:
Q  115 atcctaaatattaatgaaattgctaagtagagattagaacacagtccctgtggattagaattaaattattacttcgatataaattagtacacttgctaat 214  Q
    ||||| |||||| |||||||||||||| ||||||||||    ||||| |||||||   |||| ||||||||||| ||| |||||||||| || ||||||     
T  10649566 atcctgaatattgatgaaattgctaagaagagattaga--ctagtccttgtggatacaaatttaattattactttgatttaaattagtatacatgctaaa 10649663  T
Q  215 tttttatca 223  Q
     ||||||||    
T  10649664 attttatca 10649672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 31468038 - 31467955
Alignment:
Q  67 tttttatgcaatcaaaccaactgcctagtgcaacccccatttacatacatcctaaatattaatgaaattgctaagtagagattag 151  Q
    |||||||||||||||||||| ||||||| |||||||  ||||| ||||| | |  | ||||||| |||||||||||||| |||||    
T  31468038 tttttatgcaatcaaaccaattgcctagggcaacccaaattta-atacaacttttacattaatgcaattgctaagtagaaattag 31467955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 33383671 - 33383715
Alignment:
Q  179 attattacttcgatataaattagtacacttgctaattttttatca 223  Q
    ||||||||||| |||||| |||||||||||||||||||| |||||    
T  33383671 attattacttccatataagttagtacacttgctaattttctatca 33383715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 215
Target Start/End: Original strand, 5952438 - 5952473
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaatt 215  Q
    ||||||||||||||||| ||||||||||||||||||    
T  5952438 ttattacttcgatataagttagtacacttgctaatt 5952473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 8855123 - 8855083
Alignment:
Q  173 aattaaattattacttcgatataaattagtacacttgctaa 213  Q
    |||||||||||||||||| ||||||||| || |||||||||    
T  8855123 aattaaattattacttcggtataaattaataaacttgctaa 8855083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 94
Target Start/End: Complemental strand, 33493612 - 33493575
Alignment:
Q  57 atttatttactttttatgcaatcaaaccaactgcctag 94  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33493612 atttatttactttttatgcaatcaaaccaactgcctag 33493575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 21557456 - 21557366
Alignment:
Q  121 aatattaatgaaattgctaagtagagattagaacacagtccctgtggattagaattaaattattacttcgatataaattagtacacttgctaa 213  Q
    |||||||||||||||||||||||||||||  || | |||| | ||||||   |||| |||||||| ||| |||||| ||||||||||| ||||    
T  21557456 aatattaatgaaattgctaagtagagatt--aaaatagtcaccgtggatacaaatttaattattaattctatataatttagtacacttactaa 21557366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 34855623 - 34855570
Alignment:
Q  1 tcgaaagacttaatcccttctctaaacacatctcaaaaccgattttattcttca 54  Q
    |||||||||||||||| |||| |||||| || |||||||| |||||||||||||    
T  34855623 tcgaaagacttaatcctttctttaaacatatttcaaaacctattttattcttca 34855570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 138 - 224
Target Start/End: Original strand, 14617662 - 14617745
Alignment:
Q  138 taagtagagattagaacacagtccctgtggattagaattaaattattacttcgatataaattagtacacttgctaattttttatcag 224  Q
    ||||||||||||| ||||  ||||||| |||   ||||||| |||||||| ||||  ||||||||||||||||||||||| ||||||    
T  14617662 taagtagagattaaaaca--gtccctgaggaaacgaattaatttattact-cgattcaaattagtacacttgctaattttctatcag 14617745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 25186356 - 25186399
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaattttttatca 223  Q
    ||||||||||||| ||||||||| |||||||||||||| |||||    
T  25186356 ttattacttcgatttaaattagttcacttgctaattttctatca 25186399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 54900089 - 54900123
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaat 214  Q
    ||||||||||||||||| |||||||||||||||||    
T  54900089 ttattacttcgatataagttagtacacttgctaat 54900123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 223
Target Start/End: Original strand, 12194783 - 12194811
Alignment:
Q  195 aaattagtacacttgctaattttttatca 223  Q
    |||||||||||||||||||||||||||||    
T  12194783 aaattagtacacttgctaattttttatca 12194811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 965071 - 965115
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaattttttatcag 224  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||    
T  965071 ttattacttcgatataagttagtacacttgctaattttctatcag 965115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 223
Target Start/End: Complemental strand, 17733291 - 17733248
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaattttttatca 223  Q
    ||||||||||||||||| |||||||||||||||||||| |||||    
T  17733291 ttattacttcgatataagttagtacacttgctaattttctatca 17733248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 4332 - 4288
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaattttttatcag 224  Q
    ||||||||||||||||| |||||||||||||||||| | ||||||    
T  4332 ttattacttcgatataagttagtacacttgctaattatctatcag 4288  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 102 - 153
Target Start/End: Complemental strand, 38563 - 38512
Alignment:
Q  102 cccatttacatacatcctaaatattaatgaaattgctaagtagagattagaa 153  Q
    |||||||| ||||||  ||||||||||||||||||||| | |||||||||||    
T  38563 cccatttaaatacattttaaatattaatgaaattgctacgaagagattagaa 38512  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 180 - 223
Target Start/End: Original strand, 157409 - 157452
Alignment:
Q  180 ttattacttcgatataaattagtacacttgctaattttttatca 223  Q
    ||||||||||||||||| |||||||| ||||||||||| |||||    
T  157409 ttattacttcgatataagttagtacatttgctaattttgtatca 157452  T

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Target: scaffold0005 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 138 - 224
Target Start/End: Complemental strand, 199715 - 199632
Alignment:
Q  138 taagtagagattagaacacagtccctgtggattagaattaaattattacttcgatataaattagtacacttgctaattttttatcag 224  Q
    ||||||||||||| ||||  ||||||| |||   ||||||| |||||||| ||||  ||||||||||||||||||||||| ||||||    
T  199715 taagtagagattaaaaca--gtccctgaggaaacgaattaatttattact-cgattcaaattagtacacttgctaattttctatcag 199632  T

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