View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13901_low_9 (Length: 243)
Name: NF13901_low_9
Description: NF13901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13901_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 7787320 - 7787553
Alignment:
| Q |
1 |
taaattaaaaacatccgaagaatgccattcaactatcgaatttaa-tgtaaacagagaaggagattgctttctgtaacatcgcaaccgagcaagatgcca |
99 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
7787320 |
taaattaaaaacatccgaagaatgccattcaactatagaatttaaatgtaaacagagaaggagattgttttctgtaacatcgcaaccgagcaagatgcca |
7787419 |
T |
|
| Q |
100 |
atggattcaaggtaataagttgcaaaaacaagtaacagtgcaagattcaccagggtccgataaaacctcaagactcaaagacgtactgatatatagctca |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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|
| T |
7787420 |
atggattcaaggtaataagttgcaaaaacaagtaacagtgcaagattcaccagggtccgataaaacctcaagactcaaagacgtactgatatataactca |
7787519 |
T |
|
| Q |
200 |
tcaacgaattcctcacaccggcagcaaagtttga |
233 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
7787520 |
tcaacgaattcctcacaccggcagcaaagtttga |
7787553 |
T |
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