View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13903_low_3 (Length: 720)

Name: NF13903_low_3
Description: NF13903
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13903_low_3
NF13903_low_3
[»] scaffold0234 (4 HSPs)
scaffold0234 (479-686)||(2321-2528)
scaffold0234 (479-686)||(11212-11419)
scaffold0234 (387-443)||(2564-2620)
scaffold0234 (387-443)||(11455-11511)
[»] chr4 (65 HSPs)
chr4 (479-686)||(19926760-19926967)
chr4 (182-388)||(7142831-7143037)
chr4 (479-686)||(26970463-26970670)
chr4 (479-686)||(55612683-55612890)
chr4 (479-686)||(5707320-5707527)
chr4 (479-686)||(26963640-26963847)
chr4 (479-686)||(5713948-5714155)
chr4 (479-686)||(10621333-10621540)
chr4 (479-686)||(868597-868804)
chr4 (479-686)||(10628412-10628619)
chr4 (481-686)||(18262214-18262419)
chr4 (481-686)||(28393134-28393339)
chr4 (481-686)||(4426604-4426808)
chr4 (499-686)||(18269093-18269280)
chr4 (491-686)||(8845215-8845410)
chr4 (491-686)||(8858179-8858374)
chr4 (479-594)||(12357136-12357251)
chr4 (488-686)||(20311300-20311499)
chr4 (17-138)||(7142669-7142793)
chr4 (491-686)||(10677555-10677747)
chr4 (491-686)||(10891195-10891387)
chr4 (488-686)||(5668125-5668324)
chr4 (28-388)||(5160519-5160891)
chr4 (481-685)||(5616215-5616421)
chr4 (488-686)||(35223579-35223767)
chr4 (27-141)||(5214320-5214434)
chr4 (295-388)||(4841722-4841815)
chr4 (182-388)||(5182929-5183132)
chr4 (238-388)||(5214548-5214695)
chr4 (182-384)||(4856223-4856422)
chr4 (387-443)||(5713856-5713912)
chr4 (387-443)||(19927003-19927059)
chr4 (387-443)||(26963548-26963604)
chr4 (387-443)||(26970371-26970427)
chr4 (385-443)||(5707226-5707284)
chr4 (295-388)||(5196445-5196538)
chr4 (387-443)||(10621576-10621632)
chr4 (387-443)||(12357044-12357100)
chr4 (389-443)||(868507-868561)
chr4 (386-443)||(55612593-55612650)
chr4 (387-443)||(10628655-10628711)
chr4 (387-443)||(17142372-17142428)
chr4 (386-441)||(28393380-28393435)
chr4 (505-686)||(21454137-21454319)
chr4 (90-155)||(5196226-5196291)
chr4 (387-443)||(4426847-4426903)
chr4 (89-141)||(4841989-4842041)
chr4 (387-443)||(18268976-18269032)
chr4 (528-595)||(39074278-39074346)
chr4 (90-149)||(5182820-5182879)
chr4 (90-155)||(4856466-4856531)
chr4 (182-330)||(5173597-5173742)
chr4 (517-678)||(56516094-56516255)
chr4 (402-443)||(5668371-5668412)
chr4 (394-443)||(55992680-55992729)
chr4 (89-141)||(5173481-5173533)
chr4 (403-443)||(18262136-18262176)
chr4 (616-668)||(39074218-39074270)
chr4 (529-588)||(11161913-11161972)
chr4 (389-443)||(20311207-20311261)
chr4 (517-685)||(30040750-30040919)
chr4 (20-65)||(4842056-4842101)
chr4 (20-65)||(5173421-5173466)
chr4 (402-443)||(8845125-8845166)
chr4 (402-443)||(8858089-8858130)
[»] chr1 (25 HSPs)
chr1 (479-686)||(18252030-18252237)
chr1 (479-686)||(18532514-18532721)
chr1 (479-686)||(27131409-27131616)
chr1 (481-686)||(21171233-21171438)
chr1 (481-686)||(27310577-27310782)
chr1 (481-686)||(16359035-16359240)
chr1 (488-686)||(36816633-36816831)
chr1 (479-686)||(3855919-3856126)
chr1 (479-686)||(22657221-22657429)
chr1 (488-686)||(27277557-27277753)
chr1 (513-686)||(12006539-12006712)
chr1 (513-686)||(12014284-12014457)
chr1 (491-686)||(9917918-9918106)
chr1 (387-443)||(18251936-18251992)
chr1 (387-443)||(18532757-18532813)
chr1 (385-443)||(27310821-27310879)
chr1 (385-443)||(16359280-16359338)
chr1 (387-443)||(21171479-21171535)
chr1 (387-439)||(22657469-22657521)
chr1 (491-554)||(30720625-30720688)
chr1 (509-586)||(3403248-3403325)
chr1 (509-586)||(3443494-3443571)
chr1 (395-440)||(36816881-36816926)
chr1 (387-443)||(3856164-3856220)
chr1 (386-443)||(27131652-27131705)
[»] chr7 (25 HSPs)
chr7 (479-686)||(29327784-29327991)
chr7 (479-686)||(11536062-11536269)
chr7 (479-686)||(11542980-11543187)
chr7 (481-686)||(15152445-15152650)
chr7 (481-686)||(15148144-15148349)
chr7 (481-686)||(18561009-18561214)
chr7 (481-686)||(12750828-12751033)
chr7 (488-682)||(12738545-12738739)
chr7 (481-686)||(18257842-18258047)
chr7 (488-667)||(13392160-13392338)
chr7 (501-686)||(2364917-2365101)
chr7 (512-671)||(7396221-7396381)
chr7 (488-669)||(39111822-39112002)
chr7 (387-443)||(2653275-2653331)
chr7 (387-443)||(11543223-11543279)
chr7 (387-443)||(12738443-12738499)
chr7 (387-443)||(11536305-11536361)
chr7 (387-443)||(12750733-12750789)
chr7 (387-443)||(15152350-15152406)
chr7 (387-442)||(29327690-29327745)
chr7 (387-443)||(15148049-15148105)
chr7 (553-596)||(3132748-3132791)
chr7 (529-594)||(10234179-10234244)
chr7 (387-442)||(13392030-13392085)
chr7 (386-443)||(18258087-18258144)
[»] chr3 (51 HSPs)
chr3 (479-686)||(6110064-6110271)
chr3 (479-686)||(10572592-10572799)
chr3 (488-686)||(17781118-17781316)
chr3 (481-686)||(16482483-16482688)
chr3 (479-686)||(15600884-15601091)
chr3 (479-686)||(15607429-15607636)
chr3 (481-686)||(18522665-18522870)
chr3 (482-686)||(13211305-13211509)
chr3 (479-686)||(13248607-13248814)
chr3 (479-686)||(15357586-15357793)
chr3 (488-686)||(10579355-10579553)
chr3 (481-686)||(18519980-18520182)
chr3 (488-686)||(19089745-19089943)
chr3 (479-686)||(8490488-8490702)
chr3 (498-686)||(15342219-15342407)
chr3 (481-686)||(17200184-17200389)
chr3 (481-686)||(13516813-13517018)
chr3 (488-686)||(32056900-32057098)
chr3 (479-640)||(18640792-18640953)
chr3 (488-686)||(1647521-1647723)
chr3 (499-667)||(16200145-16200313)
chr3 (479-671)||(29924971-29925163)
chr3 (479-671)||(29974124-29974316)
chr3 (499-667)||(16200451-16200619)
chr3 (488-686)||(24253388-24253587)
chr3 (585-686)||(17136465-17136566)
chr3 (481-543)||(18534758-18534820)
chr3 (386-443)||(8490395-8490452)
chr3 (387-443)||(6109972-6110028)
chr3 (387-443)||(13248515-13248571)
chr3 (385-443)||(18640989-18641047)
chr3 (387-443)||(13211211-13211267)
chr3 (387-443)||(17136137-17136193)
chr3 (386-437)||(10579603-10579654)
chr3 (387-443)||(15607672-15607729)
chr3 (386-443)||(16482727-16482783)
chr3 (481-526)||(18510924-18510969)
chr3 (387-443)||(15351237-15351293)
chr3 (387-443)||(15357829-15357885)
chr3 (387-443)||(17200427-17200483)
chr3 (387-443)||(18519885-18519941)
chr3 (387-437)||(10572840-10572890)
chr3 (387-443)||(15601127-15601184)
chr3 (387-443)||(1647768-1647824)
chr3 (387-443)||(13516719-13516775)
chr3 (387-443)||(17781358-17781414)
chr3 (387-443)||(19089985-19090041)
chr3 (387-443)||(32057144-32057200)
chr3 (387-443)||(18510829-18510885)
chr3 (387-443)||(18522570-18522626)
chr3 (395-443)||(18534671-18534719)
[»] scaffold0390 (4 HSPs)
scaffold0390 (479-686)||(6934-7141)
scaffold0390 (479-686)||(13950-14157)
scaffold0390 (386-443)||(14193-14250)
scaffold0390 (387-443)||(7177-7233)
[»] chr8 (18 HSPs)
chr8 (479-686)||(21940665-21940872)
chr8 (481-686)||(22171491-22171694)
chr8 (488-686)||(6094132-6094330)
chr8 (481-680)||(28554885-28555084)
chr8 (488-686)||(24642658-24642856)
chr8 (488-612)||(24636863-24636987)
chr8 (491-683)||(38232380-38232570)
chr8 (386-443)||(21940572-21940629)
chr8 (387-443)||(22070108-22070164)
chr8 (385-443)||(6094029-6094087)
chr8 (509-670)||(32872857-32873019)
chr8 (387-443)||(22171396-22171452)
chr8 (387-439)||(24642556-24642608)
chr8 (387-443)||(28554791-28554847)
chr8 (500-683)||(2375027-2375208)
chr8 (517-580)||(10920234-10920297)
chr8 (386-424)||(24636604-24636642)
chr8 (575-686)||(14983920-14984030)
[»] chr6 (30 HSPs)
chr6 (479-686)||(29308890-29309097)
chr6 (479-686)||(29315850-29316057)
chr6 (481-686)||(16566320-16566525)
chr6 (479-686)||(27381252-27381459)
chr6 (479-686)||(27471635-27471842)
chr6 (481-686)||(17684469-17684674)
chr6 (479-686)||(17691440-17691647)
chr6 (481-686)||(188977-189182)
chr6 (481-686)||(25537159-25537364)
chr6 (481-686)||(11651725-11651930)
chr6 (481-686)||(13359269-13359474)
chr6 (518-686)||(20553587-20553755)
chr6 (502-686)||(27925772-27925961)
chr6 (498-671)||(8509941-8510115)
chr6 (389-443)||(17691683-17691737)
chr6 (517-686)||(17850495-17850663)
chr6 (387-443)||(27381495-27381551)
chr6 (387-443)||(27471878-27471934)
chr6 (387-443)||(29308798-29308854)
chr6 (387-443)||(29315758-29315814)
chr6 (385-441)||(11651628-11651684)
chr6 (387-443)||(17684712-17684768)
chr6 (517-685)||(20736604-20736773)
chr6 (387-443)||(25537405-25537461)
chr6 (488-541)||(31258065-31258118)
chr6 (402-443)||(13359512-13359553)
chr6 (395-443)||(16566563-16566611)
chr6 (414-443)||(189221-189250)
chr6 (402-443)||(16394484-16394525)
chr6 (495-560)||(22259925-22259990)
[»] chr2 (14 HSPs)
chr2 (479-686)||(21330248-21330455)
chr2 (498-686)||(18796525-18796713)
chr2 (488-686)||(18619814-18620011)
chr2 (488-624)||(19692598-19692734)
chr2 (544-671)||(20977957-20978084)
chr2 (513-686)||(36270199-36270373)
chr2 (387-443)||(21330493-21330549)
chr2 (513-686)||(18822115-18822290)
chr2 (387-443)||(19692773-19692829)
chr2 (515-670)||(36802664-36802820)
chr2 (599-686)||(12098618-12098705)
chr2 (599-686)||(18852059-18852146)
chr2 (521-671)||(24471643-24471792)
chr2 (617-686)||(22183483-22183552)
[»] scaffold0220 (2 HSPs)
scaffold0220 (479-686)||(18288-18495)
scaffold0220 (386-443)||(18195-18252)
[»] scaffold0433 (2 HSPs)
scaffold0433 (479-686)||(7107-7314)
scaffold0433 (387-443)||(7015-7071)
[»] chr5 (20 HSPs)
chr5 (479-686)||(24695466-24695673)
chr5 (479-686)||(18569863-18570070)
chr5 (481-686)||(19714498-19714703)
chr5 (488-686)||(19707218-19707416)
chr5 (488-667)||(27347497-27347675)
chr5 (491-686)||(22547016-22547211)
chr5 (479-588)||(39537962-39538071)
chr5 (491-664)||(17285754-17285927)
chr5 (545-686)||(18807034-18807175)
chr5 (592-684)||(39538701-39538793)
chr5 (491-664)||(17298907-17299080)
chr5 (387-443)||(24695709-24695765)
chr5 (488-588)||(31886540-31886640)
chr5 (386-443)||(19714742-19714799)
chr5 (385-443)||(27347722-27347780)
chr5 (387-443)||(19707462-19707518)
chr5 (505-595)||(33477389-33477479)
chr5 (402-443)||(18570108-18570149)
chr5 (387-442)||(39537870-39537925)
chr5 (529-597)||(11479420-11479489)
[»] scaffold0657 (2 HSPs)
scaffold0657 (479-686)||(993-1200)
scaffold0657 (387-443)||(901-957)
[»] scaffold0186 (2 HSPs)
scaffold0186 (479-686)||(25990-26197)
scaffold0186 (387-442)||(26231-26286)
[»] scaffold0063 (2 HSPs)
scaffold0063 (481-686)||(5531-5736)
scaffold0063 (395-443)||(5444-5492)
[»] scaffold0008 (2 HSPs)
scaffold0008 (481-662)||(230365-230545)
scaffold0008 (385-443)||(230584-230642)
[»] scaffold0176 (2 HSPs)
scaffold0176 (479-543)||(8446-8510)
scaffold0176 (387-443)||(8546-8602)
[»] scaffold0203 (1 HSPs)
scaffold0203 (387-443)||(23769-23825)
[»] scaffold0326 (1 HSPs)
scaffold0326 (387-443)||(16523-16579)
[»] scaffold0637 (1 HSPs)
scaffold0637 (385-443)||(8942-9000)
[»] scaffold0705 (1 HSPs)
scaffold0705 (387-443)||(41-97)
[»] scaffold0170 (1 HSPs)
scaffold0170 (387-439)||(5878-5930)
[»] scaffold0565 (2 HSPs)
scaffold0565 (389-443)||(10202-10256)
scaffold0565 (498-529)||(10127-10158)
[»] scaffold0767 (1 HSPs)
scaffold0767 (386-423)||(1-38)
[»] scaffold0032 (1 HSPs)
scaffold0032 (508-580)||(92194-92267)


Alignment Details
Target: scaffold0234 (Bit Score: 204; Significance: 1e-111; HSPs: 4)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 479 - 686
Target Start/End: Complemental strand, 2528 - 2321
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2528 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 2429  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2428 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 2329  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  2328 ctgatgat 2321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 479 - 686
Target Start/End: Complemental strand, 11419 - 11212
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11419 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 11320  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11220  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  11219 ctgatgat 11212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 2620 - 2564
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2620 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 11511 - 11455
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11511 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 11455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 204; Significance: 1e-111; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 479 - 686
Target Start/End: Complemental strand, 19926967 - 19926760
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926967 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 19926868  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926867 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 19926768  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  19926767 ctgatgat 19926760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 182 - 388
Target Start/End: Original strand, 7142831 - 7143037
Alignment:
Q  182 ctagttcaattgggatgttttcaaacctgctagcccttcgtatggatgaaaatcttttagaaggtgagatcccaattgggatgttttcaaacatgtctat 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7142831 ctagttcaattgggatgttttcaaacctgctagcccttcgtatggttgaaaatcttttagaaggtgagatcccaattgggatgttttcaaacatgtctat 7142930  T
Q  282 tcttgaatatattgatctttctcaaaacaagttaattggatcaatcccagatttaagtagtttgaaaaatctaaggctcttgtatttgcaaaagaatgat 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7142931 tcttgaatatattgatctttctcaaaacaagttaattggatcaatcccagatttaagtagtttgaaaaatctaaggctcttgtatttgcaaaagaatgat 7143030  T
Q  382 ctctctg 388  Q
    |||||||    
T  7143031 ctctctg 7143037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 479 - 686
Target Start/End: Original strand, 26970463 - 26970670
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970463 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 26970562  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970563 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26970662  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  26970663 ctgatgat 26970670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 479 - 686
Target Start/End: Original strand, 55612683 - 55612890
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612683 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 55612782  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612783 accccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 55612882  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  55612883 ctgatgat 55612890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 479 - 686
Target Start/End: Original strand, 5707320 - 5707527
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5707320 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 5707419  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5707420 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5707519  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  5707520 ctgatgat 5707527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 479 - 686
Target Start/End: Original strand, 26963640 - 26963847
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26963640 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaaatataacttaattgtgag 26963739  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963740 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26963839  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  26963840 ctgatgat 26963847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 479 - 686
Target Start/End: Original strand, 5713948 - 5714155
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  5713948 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagcccatttaatggaacattaagtataacttaattgtgag 5714047  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  5714048 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5714147  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  5714148 ctgatgat 5714155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 479 - 686
Target Start/End: Complemental strand, 10621540 - 10621333
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10621540 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10621441  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10621440 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10621341  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  10621340 ctgatgat 10621333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 479 - 686
Target Start/End: Original strand, 868597 - 868804
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  868597 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 868696  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  868697 accccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 868796  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  868797 ctgatgat 868804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 479 - 686
Target Start/End: Complemental strand, 10628619 - 10628412
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10628619 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10628520  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10628519 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatattattaaagcatagagactattatgtaggtaga 10628420  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  10628419 ctgatgat 10628412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 481 - 686
Target Start/End: Original strand, 18262214 - 18262419
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262214 aaggcatttctttattgattttgtttcgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18262313  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 680  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262314 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagact 18262413  T
Q  681 gatgat 686  Q
    ||||||    
T  18262414 gatgat 18262419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 481 - 686
Target Start/End: Complemental strand, 28393339 - 28393134
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28393339 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28393240  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 680  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28393239 cccattaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 28393140  T
Q  681 gatgat 686  Q
    ||||||    
T  28393139 gatgat 28393134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 481 - 686
Target Start/End: Complemental strand, 4426808 - 4426604
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4426808 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 4426709  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 680  Q
    ||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4426708 cccgttaaacataagg-aactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 4426610  T
Q  681 gatgat 686  Q
    ||||||    
T  4426609 gatgat 4426604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 499 - 686
Target Start/End: Original strand, 18269093 - 18269280
Alignment:
Q  499 ttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaa 598  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18269093 ttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgttaaacataaggaa 18269192  T
Q  599 actattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18269193 actattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 18269280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 491 - 686
Target Start/End: Original strand, 8845215 - 8845410
Alignment:
Q  491 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 590  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8845215 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8845314  T
Q  591 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  8845315 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtaggctgatgat 8845410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 491 - 686
Target Start/End: Original strand, 8858179 - 8858374
Alignment:
Q  491 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 590  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8858179 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8858278  T
Q  591 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  8858279 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtaggctgatgat 8858374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 479 - 594
Target Start/End: Original strand, 12357136 - 12357251
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12357136 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 12357235  T
Q  579 accccattaaacataa 594  Q
    ||||||||||||||||    
T  12357236 accccattaaacataa 12357251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 488 - 686
Target Start/End: Original strand, 20311300 - 20311499
Alignment:
Q  488 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaag-tataacttaattgtgagaccccatt 586  Q
    |||||||||||||||||||||||| ||||||||||||| | || |||||||| |  ||| |||||| ||||||| |||||||||||||||||||||||||    
T  20311300 ttctttattgattttgttttgttttaaaataataaagtacttataatagttaatatgttcaatggagcattaaggtataacttaattgtgagaccccatt 20311399  T
Q  587 aaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    ||||||||||| ||| || | |||||||  || |||||||||||||| |||||| |||||||||||||||||||||||||| ||| |||||| |||||||    
T  20311400 aaacataaggacactgtttttaaagtatttgttgtcaagctttattgtgaagtgagatatcattaaagcatagagactattttgtgggtagattgatgat 20311499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 17 - 138
Target Start/End: Original strand, 7142669 - 7142793
Alignment:
Q  17 caccttgatcctctccaacaactttctaagtggtaatattcctaaattttatatttc---aatgtatttgaaaactttatttctcaataataacaacttt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||  ||||||||||||||||||||||||||||    
T  7142669 caccttgatcctctccaacaactttctaagtggtaatattcctaaattttatatttcaataatgtatttgggaactttatttctcaataataacaacttt 7142768  T
Q  114 agtggaacactggaagatgtatttg 138  Q
     ||||||||||||||||||||||||    
T  7142769 ggtggaacactggaagatgtatttg 7142793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 491 - 686
Target Start/End: Complemental strand, 10677747 - 10677555
Alignment:
Q  491 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 590  Q
    |||||||||||| ||||||||||| | ||||||| ||||| |||| |||||| || ||||||| |||||||||| ||||||| | |||| ||||||||||    
T  10677747 tttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-cccattaaac 10677649  T
Q  591 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
      || || | |||||| |||||||||||||||||||||||  | ||| || |||| |||||||| ||| |||||||||||| ||||||||||||||    
T  10677648 gaaatgatattattcttaaagtatccgtagtcaagcttta--gtgaaatgagataacattaaagtatatagactattatgtgggtagactgatgat 10677555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 491 - 686
Target Start/End: Complemental strand, 10891387 - 10891195
Alignment:
Q  491 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 590  Q
    |||||||||||| ||||||||||| | ||||||| ||||| |||| |||||| || ||||||| |||||||||| ||||||| | |||| ||||||||||    
T  10891387 tttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-cccattaaac 10891289  T
Q  591 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
      || || | |||||| |||||||||||||||||||||||  | ||| || |||| |||||||| ||| |||||||||||| ||||||||||||||    
T  10891288 gaaatgatattattcttaaagtatccgtagtcaagcttta--gtgaaatgagataacattaaagtatatagactattatgtgggtagactgatgat 10891195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 488 - 686
Target Start/End: Complemental strand, 5668324 - 5668125
Alignment:
Q  488 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 587  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||| |||||||| | | ||||| |||||| |||||||    
T  5668324 ttctttgttgattttgttttgtttcaaaataataaagtctctagaataattagtctatttaatggagcattaagtgtgatttaatcgtgaga-cccatta 5668226  T
Q  588 aacataaggaaactattctcaaag--tatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatga 685  Q
    ||   ||||| | |||||| ||||  |||  ||||||||||||||||| |||  | |||| ||||||| ||||||||||||||||| | ||||| |||||    
T  5668225 aatgaaaggacattattcttaaagtatatttgtagtcaagctttattgtgaaaagagataacattaaatcatagagactattatgtggatagaccgatga 5668126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 28 - 388
Target Start/End: Original strand, 5160519 - 5160891
Alignment:
Q  28 tctccaacaactttctaagtggtaatattcctaaattttatatttcaatgtatttgaaaactttatttctcaataataacaactttagtggaacactgga 127  Q
    ||||| ||||||||||||||||||||||||| ||||||| || || |  |    |||||| ||||||||| |||||||||||||||||||||||||| ||    
T  5160519 tctccgacaactttctaagtggtaatattcccaaattttgtaatttaggga---tgaaaaatttatttcttaataataacaactttagtggaacacttga 5160615  T
Q  128 agatgtatttggaagcaatacaatattatatttgttgtccatatccaa-----------------caatatctagttcaattgggatgttttcaaacctg 210  Q
    ||||||||| |||| |||||||  ||||   ||  | |||||||||||                 ||||  ||||||||||||||| |||||| ||| ||    
T  5160616 agatgtattgggaaacaatacagaattagcatttctatccatatccaataattcattctcaggcacaattcctagttcaattgggacgttttctaacatg 5160715  T
Q  211 ctagcccttcgtatggatgaaaatcttttagaaggtgagatcccaattgggatgttttcaaacatgtctattcttgaatatattg-atctttct-caaaa 308  Q
      || ||||   |||  ||||||||| ||||||||||||||||| |||| |   ||||| |||||||  | ||||||| || ||| |||||||| |||||    
T  5160716 gaagtccttatcatgtctgaaaatctattagaaggtgagatccctattgag---ttttccaacatgttcagtcttgaa-atgttggatctttcttcaaaa 5160811  T
Q  309 caagttaattggatcaatcccagatttaagtagtttgaaaaatctaaggctcttgtatttgcaaaagaatgatctctctg 388  Q
    |||||||| |||||||||||||  ||||||||||||||    ||||| | ||||||||||||||||||||||||||||||    
T  5160812 caagttaaatggatcaatcccacctttaagtagtttgacttctctaaagttcttgtatttgcaaaagaatgatctctctg 5160891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 481 - 685
Target Start/End: Original strand, 5616215 - 5616421
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| ||||||||| |||||||||||||||||||||||||||| |||| |||| ||||||  |||  ||||||||||||| | ||| |||  |||||     
T  5616215 aaggcatttctttattcattttgttttgtttcaaaataataaagttcctaaaataattagtctatttcttggaacattaagtctgactaaatcatgagat 5616314  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaa--gctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    ||| ||||||   |||| | |||||| ||||||||||| |||||  | ||||||  ||| |||||||| | |||||||| |||||||||||||| |||||    
T  5616315 cccgttaaactagaggacattattcttaaagtatccgttgtcaaaggttttattatgaattgggatattaataaagcattgagactattatgtatgtaga 5616414  T
Q  679 ctgatga 685  Q
     ||||||    
T  5616415 ttgatga 5616421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 488 - 686
Target Start/End: Original strand, 35223579 - 35223767
Alignment:
Q  488 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 587  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||| |||||||| | |||||||          | | |    
T  35223579 ttctttgttgattttgttttgttttaaaataataaagtccctagaataattagtctgtttaatggagcattaagtgtgacttaat----------cgtaa 35223668  T
Q  588 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    |||  ||||| | |||||| ||||||| ||||||||||||||||||  ||   ||||| |||||||||||| |||||||||||| ||||||| ||||||    
T  35223669 aacgaaaggacattattcttaaagtattcgtagtcaagctttattgtaaaaaaggataacattaaagcatatagactattatgtgggtagacggatgat 35223767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 27 - 141
Target Start/End: Original strand, 5214320 - 5214434
Alignment:
Q  27 ctctccaacaactttctaagtggtaatattcctaaattttatatttcaatgtatttgaaaactttatttctcaataataacaactttagtggaacactgg 126  Q
    ||||||||||||||||||  ||| || |||||||||||||||| ||| ||| || || ||  |||||||||||||||||||||||||||||||||||| |    
T  5214320 ctctccaacaactttctacatgggaacattcctaaattttataattccatgaatgtggaatttttatttctcaataataacaactttagtggaacacttg 5214419  T
Q  127 aagatgtatttggaa 141  Q
    |||||||||| ||||    
T  5214420 aagatgtattgggaa 5214434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 295 - 388
Target Start/End: Complemental strand, 4841815 - 4841722
Alignment:
Q  295 gatctttctcaaaacaagttaattggatcaatcccagatttaagtagtttgaaaaatctaaggctcttgtatttgcaaaagaatgatctctctg 388  Q
    ||||||||||||||||||||||||||| |||||||| | || |||||||| ||| |||||||| |||||||||||||| |||||||||||||||    
T  4841815 gatctttctcaaaacaagttaattggagcaatcccaaagttgagtagttttaaatatctaaggttcttgtatttgcaacagaatgatctctctg 4841722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 182 - 388
Target Start/End: Original strand, 5182929 - 5183132
Alignment:
Q  182 ctagttcaattgggatgttttcaaacctgctagcccttcgtatggatgaaaatcttttagaaggtgagatcccaattgggatgttttcaaacatgtctat 281  Q
    ||||||||||||||||||||||  |  ||| || ||||| ||||   | |||||| ||||||||||||||||| |||| |||   ||| |||||| | ||    
T  5182929 ctagttcaattgggatgttttctgatatgcaagtccttcttatgtccggaaatctattagaaggtgagatccctattgagat---ttccaacatggccat 5183025  T
Q  282 tcttgaatatattg-atctttctcaaaacaagttaattggatcaatcccagatttaagtagtttgaaaaatctaaggctcttgtatttgcaaaagaatga 380  Q
    |||| || || ||| ||||||||||||||||||||| |||||| |||||| | || |||||||||| |  ||||||| |||||||||||||| |||||||    
T  5183026 tcttcaa-atgttggatctttctcaaaacaagttaaatggatcgatcccaaagttcagtagtttgacatctctaaggttcttgtatttgcaatagaatga 5183124  T
Q  381 tctctctg 388  Q
    ||||||||    
T  5183125 tctctctg 5183132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 238 - 388
Target Start/End: Original strand, 5214548 - 5214695
Alignment:
Q  238 ttagaaggtgagatcccaattgggatgttttcaaacatgtctattcttgaatatattgatctttctcaaaacaagttaattggatcaatcccagatttaa 337  Q
    ||||||||||||||||| |||| |||   ||| |||||||| | |||| ||  | | |||||||||||||||||||||||||||||||||||| | ||||    
T  5214548 ttagaaggtgagatccctattgagat---ttccaacatgtcaagtcttaaaattctggatctttctcaaaacaagttaattggatcaatcccaaagttaa 5214644  T
Q  338 gtagtttgaaaaatctaaggctcttgtatttgcaaaagaatgatctctctg 388  Q
    || |||||| |  ||| ||| |||||||||||||||||||| |||||||||    
T  5214645 gtggtttgacagttcttaggttcttgtatttgcaaaagaataatctctctg 5214695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 182 - 384
Target Start/End: Complemental strand, 4856422 - 4856223
Alignment:
Q  182 ctagttcaattgggatgttttcaaacctgctagcccttcgtatggatgaaaatcttttagaaggtgagatcccaattgggatgttttcaaacatgtctat 281  Q
    ||||||||||||||| |||||| ||| || |  |||||  ||||  ||||||||  ||||||||||||||||| |||| |||   ||| |||||||| |     
T  4856422 ctagttcaattgggaagttttctaacatggtttcccttgttatgtctgaaaatcaattagaaggtgagatccctattgagat---ttccaacatgtccag 4856326  T
Q  282 tcttgaatatattg-atctttctcaaaacaagttaattggatcaatcccagatttaagtagtttgaaaaatctaaggctcttgtatttgcaaaagaatga 380  Q
    |||| | ||| ||| |||||||||||||||||||| ||||| |||||||| | |||||| |||||| |  ||| ||| |||||||||||||||||||| |    
T  4856325 tcttta-tattttggatctttctcaaaacaagttagttggagcaatcccaaagttaagtggtttgacagttcttaggttcttgtatttgcaaaagaataa 4856227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 5713856 - 5713912
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5713856 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 5713912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 19927059 - 19927003
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19927059 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 19927003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 26963548 - 26963604
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26963548 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26963604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 26970371 - 26970427
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26970371 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26970427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 385 - 443
Target Start/End: Original strand, 5707226 - 5707284
Alignment:
Q  385 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  5707226 tctgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 5707284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 295 - 388
Target Start/End: Original strand, 5196445 - 5196538
Alignment:
Q  295 gatctttctcaaaacaagttaattggatcaatcccagatttaagtagtttgaaaaatctaaggctcttgtatttgcaaaagaatgatctctctg 388  Q
    |||||||||||||||||||||| |||||||||||||  ||||||| ||||||    ||||||| |||||||||||||| |||||| ||||||||    
T  5196445 gatctttctcaaaacaagttaaatggatcaatcccacctttaagtggtttgactcttctaaggttcttgtatttgcaagagaatggtctctctg 5196538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 10621632 - 10621576
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  10621632 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 10621576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 12357044 - 12357100
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  12357044 tgttggaataagccctaatagccaatctatattgattggatttggctttgtatcatg 12357100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 389 - 443
Target Start/End: Original strand, 868507 - 868561
Alignment:
Q  389 ttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  868507 ttggaataaaccctaatagccaatctatattgattgggtttggctttgtatcatg 868561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 386 - 443
Target Start/End: Original strand, 55612593 - 55612650
Alignment:
Q  386 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  55612593 ctgttagaataagccctaataaccaatctatattgattgggtttggctttgtatcatg 55612650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 10628711 - 10628655
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||    
T  10628711 tgttggaataagccctaatagccaatctatattgattggttttgactttgtatcatg 10628655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 17142428 - 17142372
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  17142428 tgttggaaaaagccctaatagccaatctatattgattgggtttgactttgtatcatg 17142372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 386 - 441
Target Start/End: Complemental strand, 28393435 - 28393380
Alignment:
Q  386 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatca 441  Q
    |||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||    
T  28393435 ctgttggagtaagccctaatagccaatctatattgattgggtttgactttgtatca 28393380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 505 - 686
Target Start/End: Complemental strand, 21454319 - 21454137
Alignment:
Q  505 tttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacatt-aagtataacttaattgtgagaccccattaaacataaggaaactat 603  Q
    ||||||||||| ||||||||| | |||||||||||||  | ||||||||||||| || | | |||||||  ||||||||||||||  |||| || | |||    
T  21454319 tttgtttcaaagtaataaagttcttagaatagttagtttgattaatggaacattaaaatgtgacttaatattgagaccccattaattataatgacattat 21454220  T
Q  604 tctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    | | ||| ||||  ||||||| |||||||| ||| || |||| || ||| ||||| ||| ||||||||  ||||| |||||||    
T  21454219 ttttaaaatatctatagtcaaactttattgtgaaatgagataacaataatgcataaagattattatgtgagtagattgatgat 21454137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 155
Target Start/End: Original strand, 5196226 - 5196291
Alignment:
Q  90 ttatttctcaataataacaactttagtggaacactggaagatgtatttggaagcaatacaatatta 155  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||| ||||  ||||||| ||||    
T  5196226 ttatttcttaataataacaactttagtggaacacttgaagatgtattaggaaataatacaagatta 5196291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 4426903 - 4426847
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||| |||| | |||||||||||||||||||||||||||||||| |||||||||    
T  4426903 tgttggagtaagtcctaatagccaatctatattgattgggtttggctctgtatcatg 4426847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 4842041 - 4841989
Alignment:
Q  89 tttatttctcaataataacaactttagtggaacactggaagatgtatttggaa 141  Q
    |||||||||||||||||||||||||||||||||||| || |||||||| ||||    
T  4842041 tttatttctcaataataacaactttagtggaacacttgatgatgtattgggaa 4841989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 18268976 - 18269032
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||||||||||  |||||||||||||| |||| |||||||||||||||||||||    
T  18268976 tgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 18269032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 528 - 595
Target Start/End: Complemental strand, 39074346 - 39074278
Alignment:
Q  528 ctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataag 595  Q
    |||||||| ||||||||||||| | ||||||||||||| |||||||  |||||||||||||||||||||    
T  39074346 ctagaataattagtccgtttaaattgaacattaagtatgacttaatcatgagaccccattaaacataag 39074278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 5182820 - 5182879
Alignment:
Q  90 ttatttctcaataataacaactttagtggaacactggaagatgtatttggaagcaataca 149  Q
    |||||||| |||||||||||||||||||||||||| ||||||||||| | || |||||||    
T  5182820 ttatttcttaataataacaactttagtggaacacttgaagatgtattggaaaacaataca 5182879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 90 - 155
Target Start/End: Complemental strand, 4856531 - 4856466
Alignment:
Q  90 ttatttctcaataataacaactttagtggaacactggaagatgtatttggaagcaatacaatatta 155  Q
    ||||| |||| |||||||||||||||||||||||| ||||||||||| ||||  ||||||| ||||    
T  4856531 ttattgctcagtaataacaactttagtggaacacttgaagatgtattgggaaataatacaagatta 4856466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 182 - 330
Target Start/End: Original strand, 5173597 - 5173742
Alignment:
Q  182 ctagttcaattgggatgttttcaaacctgctagcccttcgtatggatgaaaatcttttagaaggtgagatcccaattgggatgttttcaaacatgtctat 281  Q
    |||||||||||||||||||||| ||| ||   | ||||| ||||  | ||||||  ||||||||| ||||||| |||| |||   ||| |||||||| |     
T  5173597 ctagttcaattgggatgttttctaacatgtatgtccttcttatgtctaaaaatcaattagaaggtcagatccctattgagat---ttccaacatgtccag 5173693  T
Q  282 tcttgaatatattg-atctttctcaaaacaagttaattggatcaatccca 330  Q
    |||| | ||| ||| |||||||||||||||||||||||||| ||||||||    
T  5173694 tcttta-tattttggatctttctcaaaacaagttaattggagcaatccca 5173742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 517 - 678
Target Start/End: Original strand, 56516094 - 56516255
Alignment:
Q  517 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaa-actattctcaaagtatc 615  Q
    ||||||||||| |||||||| | ||  |  ||||| |||||||| | | |||||||||||||||  |||||| ||||  ||| | ||||||  |||||||    
T  56516094 taataaagtccttagaatagatggttagagtaatgaaacattaattgtgacttaattgtgagacttcattaa-catatagaacattattcttgaagtatc 56516192  T
Q  616 cgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
      |||||||||||||||| |||    ||||  |||||| ||||||||||||||||||||||||    
T  56516193 tatagtcaagctttattgtgaataacgatagtattaaaacatagagactattatgtaggtaga 56516255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 402 - 443
Target Start/End: Complemental strand, 5668412 - 5668371
Alignment:
Q  402 taatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||||||||||||||||||| |||||| |||||||||||    
T  5668412 taatagccaatctatattgattgtgtttggttttgtatcatg 5668371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 443
Target Start/End: Original strand, 55992680 - 55992729
Alignment:
Q  394 ataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||| ||||||||||| | ||||||||||||||| ||||||||||||    
T  55992680 ataagccctaatagccaatttgtattgattgggtttgactttgtatcatg 55992729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 89 - 141
Target Start/End: Original strand, 5173481 - 5173533
Alignment:
Q  89 tttatttctcaataataacaactttagtggaacactggaagatgtatttggaa 141  Q
    |||||| || |||||||||||||||||||||||||| || |||||||| ||||    
T  5173481 tttattactgaataataacaactttagtggaacacttgatgatgtattgggaa 5173533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 403 - 443
Target Start/End: Original strand, 18262136 - 18262176
Alignment:
Q  403 aatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  18262136 aatagccaatctatgttgaatgggtttggctttgtatcatg 18262176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 616 - 668
Target Start/End: Complemental strand, 39074270 - 39074218
Alignment:
Q  616 cgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatta 668  Q
    ||||||||  |||||||| |||||| |||||||||||||||| ||||||||||    
T  39074270 cgtagtcatactttattgtgaagtgagatatcattaaagcatggagactatta 39074218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 529 - 588
Target Start/End: Complemental strand, 11161972 - 11161913
Alignment:
Q  529 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaa 588  Q
    ||||||||||| || |||||||||||||  |||| | ||||||||||||||| |||||||    
T  11161972 tagaatagttaatcagtttaatggaacacaaagtgtgacttaattgtgagactccattaa 11161913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 389 - 443
Target Start/End: Original strand, 20311207 - 20311261
Alignment:
Q  389 ttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||| |||||  ||||||||||||| |||| ||||| |||||||||||||||||    
T  20311207 ttggagtaagctgtaatagccaatctgtattcattggatttggctttgtatcatg 20311261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 517 - 685
Target Start/End: Complemental strand, 30040919 - 30040750
Alignment:
Q  517 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaa-actattctcaaa-gtat 614  Q
    ||||||||| |||||||||| |||| ||| |||| | | ||||||| | |||||||  |||||   |||||| ||||| ||| |||||||| ||| ||||    
T  30040919 taataaagttcctagaatagatagttcgtgtaatagtatattaagtgtgacttaatcatgagattacattaa-cataaagaacactattcttaaatgtat 30040821  T
Q  615 ccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatga 685  Q
    |  ||||||||| ||| |  ||| |||||||  | |||||||| ||||||||||||||  |||||||||||    
T  30040820 ctatagtcaagcgttaatatgaattgggataataataaagcatcgagactattatgtatatagactgatga 30040750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 4842101 - 4842056
Alignment:
Q  20 cttgatcctctccaacaactttctaagtggtaatattcctaaattt 65  Q
    |||||| ||||||||||||| |||| |||| |||||||||||||||    
T  4842101 cttgattctctccaacaactctctatgtgggaatattcctaaattt 4842056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 5173421 - 5173466
Alignment:
Q  20 cttgatcctctccaacaactttctaagtggtaatattcctaaattt 65  Q
    |||||| ||||||||||||| |||| |||| |||||||||||||||    
T  5173421 cttgattctctccaacaactctctacgtgggaatattcctaaattt 5173466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 402 - 443
Target Start/End: Original strand, 8845125 - 8845166
Alignment:
Q  402 taatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||    
T  8845125 taatagccaatctatgttgattgagtttgactttgtatcatg 8845166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 402 - 443
Target Start/End: Original strand, 8858089 - 8858130
Alignment:
Q  402 taatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||    
T  8858089 taatagccaatctatgttgattgagtttgactttgtatcatg 8858130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 479 - 686
Target Start/End: Original strand, 18252030 - 18252237
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252030 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18252129  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252130 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18252229  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  18252230 ctgatgat 18252237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 479 - 686
Target Start/End: Complemental strand, 18532721 - 18532514
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18532721 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagttcgtttaatggaacattaagtataacttaattgtgag 18532622  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18532621 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtagataga 18532522  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  18532521 ctgatgat 18532514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 479 - 686
Target Start/End: Complemental strand, 27131616 - 27131409
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27131616 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27131517  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  27131516 accccattaaacataaggaaactattctcaaagtatttgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 27131417  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  27131416 ctgatgat 27131409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 481 - 686
Target Start/End: Complemental strand, 21171438 - 21171233
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  21171438 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttcatggaacattaaatataacttaattgtgagac 21171339  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 680  Q
    ||| || ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  21171338 cccgttgaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagact 21171239  T
Q  681 gatgat 686  Q
    ||||||    
T  21171238 gatgat 21171233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 481 - 686
Target Start/End: Complemental strand, 27310782 - 27310577
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27310782 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 27310683  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 680  Q
    | | || ||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  27310682 cacgttgaacataaggaaactattcttaaagtatcagtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtgggtagact 27310583  T
Q  681 gatgat 686  Q
    ||||||    
T  27310582 gatgat 27310577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 481 - 686
Target Start/End: Complemental strand, 16359240 - 16359035
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  16359240 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagaataacttaattgtgagac 16359141  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 680  Q
    ||| |||||||||||||||||||||| |||||| || |||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  16359140 cccgttaaacataaggaaactattcttaaagtaaccctagtcaagctttattgagaaatggaatatcattaaagcatagagactattatgtgggtagact 16359041  T
Q  681 gatgat 686  Q
    ||||||    
T  16359040 gatgat 16359035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 488 - 686
Target Start/End: Complemental strand, 36816831 - 36816633
Alignment:
Q  488 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 587  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| || |||    
T  36816831 ttctttattgattttgttttgtttcaaaataatgaagtccctagaatagttcgtctgtttaatggaacattaagtataaattaattgtgagactccgtta 36816732  T
Q  588 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    |||||||||| | |||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||    
T  36816731 aacataaggacattattcttaaagtatccatagtcaagctttattgagaagtgggataccattaaagcatagagactattatgtggatagactgatgat 36816633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 140; E-Value: 6e-73
Query Start/End: Original strand, 479 - 686
Target Start/End: Complemental strand, 3856126 - 3855919
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| |||||| || |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3856126 acaaggcatttctttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagcccgtttaatggaacattaagtataacttaattgtgag 3856027  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    ||||||||||||||||||| | |||||| ||| |||  |||||||| |||||||| |||||||||||| |||||||||| |||||||||| || ||||||    
T  3856026 accccattaaacataaggacattattcttaaaatatttgtagtcaaactttattgtgaagtgggatattattaaagcatggagactattacgtgggtaga 3855927  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  3855926 ctgatgat 3855919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 479 - 686
Target Start/End: Complemental strand, 22657429 - 22657221
Alignment:
Q  479 acaaggcaattctttattgatttt-gttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtga 577  Q
    ||||| || ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  22657429 acaagacatttctttattgatttttgttttgtttcaaaataataaagttcctagaatagttagtctgtttaatggaacattaaatataacttaattgtga 22657330  T
Q  578 gaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtag 677  Q
    |||||| ||||||||||||| || ||||| ||||| ||  |||||||||||||||  ||| || ||||||||||||||||||||||||| |||| | |||    
T  22657329 gacccctttaaacataaggacacaattcttaaagtgtctctagtcaagctttattctgaaatgagatatcattaaagcatagagactatcatgtggatag 22657230  T
Q  678 actgatgat 686  Q
    |||||||||    
T  22657229 actgatgat 22657221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 488 - 686
Target Start/End: Complemental strand, 27277753 - 27277557
Alignment:
Q  488 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 587  Q
    |||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||| ||||| || | ||||||| | ||||||   |||    
T  27277753 ttctttgttgtttttgttttgtttcaaaataataacgtccctagaataattagtccatttaacggagcatta-gtgtgacttaatcgcgagacctt-tta 27277656  T
Q  588 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    | |  || || | |||||| |||||||||||||||| ||||||||| |||  |||||| ||||||||||||||||||||||||| ||||||| ||||||    
T  27277655 accgaaatgacattattcttaaagtatccgtagtcaggctttattgtgaaaagggataacattaaagcatagagactattatgtgggtagaccgatgat 27277557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 513 - 686
Target Start/End: Complemental strand, 12006712 - 12006539
Alignment:
Q  513 aaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagt 612  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||||| |  |||||| |||||||||||| ||||||||||| | |||| | |||      
T  12006712 aaaataataaagtccctagaatagttagtctatttaatggaatattaagtgtgccttaatcgtgagaccccatgaaacataaggacattattattaaaac 12006613  T
Q  613 atccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    || ||||||||||| ||| || |||| |||||| ||||||| | |||||| | ||||||   ||||||||||||    
T  12006612 attcgtagtcaagccttagtgtgaagagggataacattaaaacttagagattgttatgtgcatagactgatgat 12006539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 513 - 686
Target Start/End: Complemental strand, 12014457 - 12014284
Alignment:
Q  513 aaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagt 612  Q
    |||||||||||||| ||||||||  ||||||||||||||||| ||||||| ||| ||||| || ||| |||||||||||||| ||   |||||| |||      
T  12014457 aaaataataaagtcactagaatacatagtccgtttaatggaatattaagtgtaaattaatcgttagatcccattaaacataatgatgttattcttaaaac 12014358  T
Q  613 atccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    ||||||||| |||||||| || |||| ||||||  |||||||| || |||| ||||||| |||||| |||||||    
T  12014357 atccgtagttaagctttagtgtgaagagggatacgattaaagcgtaaagaccattatgtgggtagaatgatgat 12014284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 491 - 686
Target Start/End: Complemental strand, 9918106 - 9917918
Alignment:
Q  491 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 590  Q
    |||||||||||||||||||| ||||||||||||||| ||       |||||  ||||||| |||||||||||||||||| ||   ||||  ||||||||     
T  9918106 tttattgattttgttttgttacaaaataataaagtcactt------ttagtttgtttaatcgaacattaagtataacttgatcacgaga-tccattaaat 9918014  T
Q  591 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    ||||||| | |||||| ||| ||||  |||| |||||||||||  |||||||||| |||| ||||||||||| || ||||| |||||  |||||||    
T  9918013 ataaggacattattcttaaaatatctatagttaagctttattgttaagtgggatagcattgaagcatagagaatactatgtcggtaggttgatgat 9917918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 18251936 - 18251992
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18251936 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18251992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 18532813 - 18532757
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18532813 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18532757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 385 - 443
Target Start/End: Complemental strand, 27310879 - 27310821
Alignment:
Q  385 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  27310879 tctgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 27310821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 385 - 443
Target Start/End: Complemental strand, 16359338 - 16359280
Alignment:
Q  385 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||||| |||||| ||||||||||||||||||||||||||| || |||||||||||    
T  16359338 tctgttggagtaagccctaatagccaatctatattgattgggttaggatttgtatcatg 16359280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 21171535 - 21171479
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||| |||||  ||||||||||||||||| ||||| ||||||||||||||||||    
T  21171535 tgttggagtaagctctaatagccaatctatatggattgagtttggctttgtatcatg 21171479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 22657521 - 22657469
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtat 439  Q
    ||||||| |||||| ||||||||||| ||||||||||| ||||||||||||||    
T  22657521 tgttggagtaagccttaatagccaatatatattgattgagtttggctttgtat 22657469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 491 - 554
Target Start/End: Complemental strand, 30720688 - 30720625
Alignment:
Q  491 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaa 554  Q
    ||||||| |||| |||||||| ||||||||||||| ||| ||||| ||||| ||||||||||||    
T  30720688 tttattggttttattttgttttaaaataataaagttcctggaataattagttcgtttaatggaa 30720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 509 - 586
Target Start/End: Original strand, 3403248 - 3403325
Alignment:
Q  509 tttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatt 586  Q
    ||||||| ||||||||||  || ||||||||||| | ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3403248 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3403325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 509 - 586
Target Start/End: Complemental strand, 3443571 - 3443494
Alignment:
Q  509 tttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatt 586  Q
    ||||||| ||||||||||  || ||||||||||| | ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3443571 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3443494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 395 - 440
Target Start/End: Complemental strand, 36816926 - 36816881
Alignment:
Q  395 taagccataatagccaatctatattgattgggtttggctttgtatc 440  Q
    |||||| |||||  ||||||||||||||||||||||||||||||||    
T  36816926 taagccctaatattcaatctatattgattgggtttggctttgtatc 36816881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 3856220 - 3856164
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||| || ||| |||||||||||| || ||||||||||||| ||||||||||||    
T  3856220 tgttggagtaggccctaatagccaatccatcttgattgggtttgactttgtatcatg 3856164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 386 - 443
Target Start/End: Complemental strand, 27131705 - 27131652
Alignment:
Q  386 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||||||||||| |||||||||||||||     ||||||||||||||||||||||    
T  27131705 ctgttggaataagccctaatagccaatctat----gttgggtttggctttgtatcatg 27131652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 479 - 686
Target Start/End: Original strand, 29327784 - 29327991
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29327784 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgag 29327883  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29327884 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29327983  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  29327984 ctgatgat 29327991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 479 - 686
Target Start/End: Complemental strand, 11536269 - 11536062
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11536269 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtacaacttaattgtgag 11536170  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11536169 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11536070  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  11536069 ctgatgat 11536062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 479 - 686
Target Start/End: Complemental strand, 11543187 - 11542980
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11543187 acaatgcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtcag 11543088  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11543087 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11542988  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  11542987 ctgatgat 11542980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 182; E-Value: 5e-98
Query Start/End: Original strand, 481 - 686
Target Start/End: Original strand, 15152445 - 15152650
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152445 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 15152544  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 680  Q
    ||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152545 cccgttaaacatacggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 15152644  T
Q  681 gatgat 686  Q
    ||||||    
T  15152645 gatgat 15152650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 481 - 686
Target Start/End: Original strand, 15148144 - 15148349
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  15148144 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttgattgaacattaagtataacttaattgtgagac 15148243  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 680  Q
    ||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15148244 cccgttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 15148343  T
Q  681 gatgat 686  Q
    ||||||    
T  15148344 gatgat 15148349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 481 - 686
Target Start/End: Original strand, 18561009 - 18561214
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  18561009 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaactgtgagac 18561108  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 680  Q
    ||| |||||||| ||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  18561109 cccgttaaacattaggaaactattcttaaagtatctgtagtcaagctttattgagaggtgggatatcattaaagcatagagactattatgtgggtagact 18561208  T
Q  681 gatgat 686  Q
    ||||||    
T  18561209 gatgat 18561214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 481 - 686
Target Start/End: Original strand, 12750828 - 12751033
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12750828 aaggcatttctttattgattttgttttgtttcaaagtaataaagtccctagaatagttagtccgtttaatgaaacattaagtataacttaattgtgagac 12750927  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 680  Q
    | | |||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||    
T  12750928 ctcgttaaacataaagaaactattcttaaagtatccgtagtcaagctttattgagaagttggatatcattaaagcatagagactattatgtggatagact 12751027  T
Q  681 gatgat 686  Q
    ||||||    
T  12751028 gatgat 12751033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 488 - 682
Target Start/End: Original strand, 12738545 - 12738739
Alignment:
Q  488 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 587  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||| |||||||| ||||||||||||||||||||   |||    
T  12738545 ttctttattgattttattttgtttcaaaataataaagtccctagaatagttagtttgtttaatgaaacattaattataacttaattgtgagaccttgtta 12738644  T
Q  588 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactga 682  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12738645 aacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagactga 12738739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 481 - 686
Target Start/End: Complemental strand, 18258047 - 18257842
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||    
T  18258047 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtctgtttaatggaacattaagtatgacttaattgtgagac 18257948  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 680  Q
    ||||||||||| ||||| | |||||| |||||||||||||||||| ||| |||  |||| ||||| || ||| ||||| |||||||||||| | |||| |    
T  18257947 cccattaaacacaaggacattattcttaaagtatccgtagtcaagtttttttgttaagtaggataacaataatgcataaagactattatgtggatagatt 18257848  T
Q  681 gatgat 686  Q
    ||||||    
T  18257847 gatgat 18257842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 488 - 667
Target Start/End: Original strand, 13392160 - 13392338
Alignment:
Q  488 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 587  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||| | |||||| | |||||||| |||||||| | ||||||| |||||| |||||||    
T  13392160 ttctttgttgactttgttttgtttcaaaataataaagttcctagaacaattagtctgcttaatggagcattaagtgtgacttaatcgtgaga-cccatta 13392258  T
Q  588 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 667  Q
    ||   ||||| | |||||| ||||||||  ||||||| |||||||| |||  |||||| ||||||| |||||||||||||    
T  13392259 aatgaaaggacattattcttaaagtatcaatagtcaaactttattgtgaaaagggataacattaaaacatagagactatt 13392338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 501 - 686
Target Start/End: Original strand, 2364917 - 2365101
Alignment:
Q  501 ttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaac 600  Q
    ||||| |||||||||||||||||||| |||||||| ||||||  | |||||||||||||||| |  |||||| |||||| ||||||||||  || || |     
T  2364917 ttgttatgtttcaaaataataaagtctctagaataattagtctttctaatggaacattaagtgtggcttaatcgtgagaacccattaaactaaatgacat 2365016  T
Q  601 tattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    |||||| ||| ||| ||||||||| | |||||| ||| || |||| ||||||| |||||||||||| |||| ||| ||||||||||    
T  2365017 tattcttaaaatattcgtagtcaa-ccttattgtgaaatgagataacattaaaacatagagactatcatgtgggtcgactgatgat 2365101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 512 - 671
Target Start/End: Original strand, 7396221 - 7396381
Alignment:
Q  512 caaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaa 610  Q
    |||||||| || ||| |||||||||||||| | ||||| ||||||||||||||| |||||||  |||||||| |||||||||||| ||| |||||| |||    
T  7396221 caaaataaaaatgtcgctagaatagttagttcatttaaatggaacattaagtatgacttaatcttgagaccctattaaacataagaaaattattcttaaa 7396320  T
Q  611 gtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 671  Q
      ||  |||||||||| ||| || ||| |  |||   ||||||||||||||||||||||||    
T  7396321 acatatgtagtcaagccttagtgtgaaatacgatgatattaaagcatagagactattatgt 7396381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 488 - 669
Target Start/End: Original strand, 39111822 - 39112002
Alignment:
Q  488 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 587  Q
    ||||||||| |||||||||| |||||||| |||||||||||||||||||  ||||||||||||| |||||||||||  |||||||    ||||  | |||    
T  39111822 ttctttattaattttgttttatttcaaaa-aataaagtccctagaatagcgagtccgtttaatgaaacattaagtacgacttaatcacaagacatcttta 39111920  T
Q  588 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattat 669  Q
    |||||||||| ||||||   ||| ||| |  |||| |||||||||| |||  |  ||| |||||||  ||||||||||||||    
T  39111921 aacataaggacactatttcaaaaatattcacagtccagctttattgtgaaacgaaataacattaaaatatagagactattat 39112002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 2653331 - 2653275
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  2653331 tgttggaataagccctaatagccaatctatattgattgggattggctttgtatcatg 2653275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 11543279 - 11543223
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  11543279 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 11543223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 12738443 - 12738499
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12738443 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 12738499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 11536361 - 11536305
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  11536361 tgttggaataagccctaatagccactctatattgattggttttggctttgtatcatg 11536305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 12750733 - 12750789
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  12750733 tgttggagtaagccctaatagctaatctatattgattgggtttggctttgtatcatg 12750789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 15152350 - 15152406
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||    
T  15152350 tgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcatg 15152406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 387 - 442
Target Start/End: Original strand, 29327690 - 29327745
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcat 442  Q
    ||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  29327690 tgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcat 29327745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 15148049 - 15148105
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||| |||||||||||    
T  15148049 tgttggagtaagccctaatagccaatctatattaattgggtttggttttgtatcatg 15148105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 553 - 596
Target Start/End: Original strand, 3132748 - 3132791
Alignment:
Q  553 aacattaagtataacttaattgtgagaccccattaaacataagg 596  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  3132748 aacattaagtgtaacttaattgtgagaccccattaaacataagg 3132791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 529 - 594
Target Start/End: Original strand, 10234179 - 10234244
Alignment:
Q  529 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataa 594  Q
    ||||||||||||||||||||||| | |||||| |||||||||||  |||||  |||||||||||||    
T  10234179 tagaatagttagtccgtttaatgaaccattaaatataacttaatcatgagattccattaaacataa 10234244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 387 - 442
Target Start/End: Original strand, 13392030 - 13392085
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcat 442  Q
    ||||||| |||||| ||||| ||||||||||||||||| ||||| |||||||||||    
T  13392030 tgttggagtaagccctaatatccaatctatattgattgtgtttgactttgtatcat 13392085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 386 - 443
Target Start/End: Complemental strand, 18258144 - 18258087
Alignment:
Q  386 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||| |||||| | |||||||||||| ||||||||| |||||| ||||||||||    
T  18258144 ctgttggagtaagccctgatagccaatctagattgattggttttggccttgtatcatg 18258087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 479 - 686
Target Start/End: Original strand, 6110064 - 6110271
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110064 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 6110163  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110164 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6110263  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  6110264 ctgatgat 6110271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 479 - 686
Target Start/End: Complemental strand, 10572799 - 10572592
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572799 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10572700  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572699 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10572600  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  10572599 ctgatgat 10572592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 488 - 686
Target Start/End: Complemental strand, 17781316 - 17781118
Alignment:
Q  488 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 587  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781316 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 17781217  T
Q  588 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781216 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 17781118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 481 - 686
Target Start/End: Complemental strand, 16482688 - 16482483
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482688 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16482589  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 680  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482588 cccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 16482489  T
Q  681 gatgat 686  Q
    ||||||    
T  16482488 gatgat 16482483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 479 - 686
Target Start/End: Complemental strand, 15601091 - 15600884
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15601091 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15600992  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600991 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15600892  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  15600891 ctgatgat 15600884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 479 - 686
Target Start/End: Complemental strand, 15607636 - 15607429
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607636 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15607537  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607536 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15607437  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  15607436 ctgatgat 15607429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 481 - 686
Target Start/End: Original strand, 18522665 - 18522870
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18522665 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18522764  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 680  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18522765 cccattaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcatttaagcatagagactattatgtaggtagact 18522864  T
Q  681 gatgat 686  Q
    ||||||    
T  18522865 gatgat 18522870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 482 - 686
Target Start/End: Original strand, 13211305 - 13211509
Alignment:
Q  482 aggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 581  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13211305 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 13211404  T
Q  582 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 681  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13211405 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagactg 13211504  T
Q  682 atgat 686  Q
    |||||    
T  13211505 atgat 13211509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 479 - 686
Target Start/End: Original strand, 13248607 - 13248814
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 13248706  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13248707 accccattaaacataaggaaactattctcaaagtattcgtagtcaagctttgttgagaagtgggataacattaaagcatagagactattatgtaggtaga 13248806  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  13248807 ctgatgat 13248814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 479 - 686
Target Start/End: Complemental strand, 15357793 - 15357586
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15357793 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgag 15357694  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15357693 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtaga 15357594  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  15357593 ctgatgat 15357586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 488 - 686
Target Start/End: Complemental strand, 10579553 - 10579355
Alignment:
Q  488 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 587  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10579553 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgttaaatggaacattaagtataacttaattgtgagaccccatta 10579454  T
Q  588 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10579453 aacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagactgatgat 10579355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 481 - 686
Target Start/End: Original strand, 18519980 - 18520182
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18519980 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18520079  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 680  Q
    ||| |||||||||||||||||||||| ||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18520080 cccgttaaacataaggaaactattcttaa---atccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 18520176  T
Q  681 gatgat 686  Q
    ||||||    
T  18520177 gatgat 18520182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 488 - 686
Target Start/End: Complemental strand, 19089943 - 19089745
Alignment:
Q  488 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 587  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  19089943 ttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgagaccccttta 19089844  T
Q  588 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  19089843 aacataatgaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaatcatagagactattatgtaggtagactgatgat 19089745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 479 - 686
Target Start/End: Original strand, 8490488 - 8490702
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8490488 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 8490587  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagact-------attatgt 671  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||       |||||||    
T  8490588 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactacagacgattatgt 8490687  T
Q  672 aggtagactgatgat 686  Q
    |||||||||||||||    
T  8490688 aggtagactgatgat 8490702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 498 - 686
Target Start/End: Complemental strand, 15342407 - 15342219
Alignment:
Q  498 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 597  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15342407 attttgttttgtttcaaaataataaagtccctagaatagtttgttcgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 15342308  T
Q  598 aactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15342307 acctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtagactgatgat 15342219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 481 - 686
Target Start/End: Complemental strand, 17200389 - 17200184
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  17200389 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgatac 17200290  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 680  Q
    ||| |||||||||| ||||||||||| |||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  17200289 ccctttaaacataatgaaactattcttaaagtatccgtagttaagctttattgagatgtgtgatatcattaaagcatagagactattatgtgggtagact 17200190  T
Q  681 gatgat 686  Q
    ||||||    
T  17200189 gatgat 17200184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 481 - 686
Target Start/End: Original strand, 13516813 - 13517018
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  13516813 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttcatggaacattaagtataacttaattgtgagac 13516912  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 680  Q
    ||| |||||||||||||||| ||||| |||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  13516913 cccgttaaacataaggaaacgattcttaaagtatctgtagtcaagctttattgagaagtaggatatcattaaagcacagagactattatgtgggtagact 13517012  T
Q  681 gatgat 686  Q
    ||||||    
T  13517013 gatgat 13517018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 155; E-Value: 7e-82
Query Start/End: Original strand, 488 - 686
Target Start/End: Complemental strand, 32057098 - 32056900
Alignment:
Q  488 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 587  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| ||||||| |||    
T  32057098 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatcaagtataactttattgtaagaccccgtta 32056999  T
Q  588 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    ||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  32056998 aacataaagaaactattcttaaagtgtccgtagtcaaactttattgagaagtgggatatcattaaagcatagagactattatgtgggtagactaatgat 32056900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 479 - 640
Target Start/End: Complemental strand, 18640953 - 18640792
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18640953 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 18640854  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtg 640  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18640853 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtg 18640792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 488 - 686
Target Start/End: Complemental strand, 1647723 - 1647521
Alignment:
Q  488 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataa----cttaattgtgagacccc 583  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    |||||||||||||||||    
T  1647723 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataattaacttaattgtgagacccc 1647624  T
Q  584 attaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgat 683  Q
     |||||||||||||||||||| | |||||||||||| |||||||||||||||||  ||||||| |||||||||||||||||||||||| | |||||||||    
T  1647623 gttaaacataaggaaactatttttaaagtatccgtaatcaagctttattgagaaaagggatataattaaagcatagagactattatgtggatagactgat 1647524  T
Q  684 gat 686  Q
    |||    
T  1647523 gat 1647521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 499 - 667
Target Start/End: Original strand, 16200145 - 16200313
Alignment:
Q  499 ttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaa 598  Q
    |||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  16200145 ttttattttgtttcaaaataataaagtccttagaatagttagttcgtttaatggaacattatgtataacttaattgtgagaccccattaaacataaggac 16200244  T
Q  599 actattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 667  Q
    | |||||| ||||||| |||||||||| ||||||| ||||||||||||||||||||||| |||||||||    
T  16200245 attattcttaaagtattcgtagtcaagatttattgtgaagtgggatatcattaaagcatggagactatt 16200313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 479 - 671
Target Start/End: Original strand, 29924971 - 29925163
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    ||||| || ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| |||||||||||    
T  29924971 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29925070  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 671  Q
    ||||||||||| ||||||| | |||||| ||| |||  ||||||||||||||||| |||||| |||||||||||||||| ||| |||||||||    
T  29925071 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29925163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 479 - 671
Target Start/End: Original strand, 29974124 - 29974316
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    ||||| || ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| |||||||||||    
T  29974124 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29974223  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 671  Q
    ||||||||||| ||||||| | |||||| ||| |||  ||||||||||||||||| |||||| |||||||||||||||| ||| |||||||||    
T  29974224 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29974316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 499 - 667
Target Start/End: Original strand, 16200451 - 16200619
Alignment:
Q  499 ttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaa 598  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||     
T  16200451 ttttattttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattatgtataacttaattgtgagactccaataaacataaggac 16200550  T
Q  599 actattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 667  Q
    | |||||| ||||||| |||||||||| ||||||| |||||||||| ||||||||||||  ||||||||    
T  16200551 attattcttaaagtattcgtagtcaagatttattgtgaagtgggatgtcattaaagcatgaagactatt 16200619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 488 - 686
Target Start/End: Complemental strand, 24253587 - 24253388
Alignment:
Q  488 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgaga-ccccatt 586  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||| | || ||||| |||||||||||||||| ||||||| |||||| ||||||     
T  24253587 ttctttattgattttgttttacttcaaaataataaagtccttagaatagctcgttcgtttgatggaacattaagtatgacttaatcgtgagatccccatc 24253488  T
Q  587 aaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    ||||||||||| |||||||| |||||||  || |||||  |||||||  ||||| | || ||||||||||||||||||||||||| |||||||| |||||    
T  24253487 aaacataaggacactattcttaaagtatatgtggtcaaaatttattgtaaagtgaggtaacattaaagcatagagactattatgtcggtagactaatgat 24253388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 585 - 686
Target Start/End: Original strand, 17136465 - 17136566
Alignment:
Q  585 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 684  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  17136465 ttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtgggtagactgatg 17136564  T
Q  685 at 686  Q
    ||    
T  17136565 at 17136566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 481 - 543
Target Start/End: Original strand, 18534758 - 18534820
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 543  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18534758 aaggcatttctttattgattttgttttgtttcaaaataataaagtccatagaatagttagtcc 18534820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 386 - 443
Target Start/End: Original strand, 8490395 - 8490452
Alignment:
Q  386 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  8490395 ctgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 8490452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 6109972 - 6110028
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6109972 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 6110028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 13248515 - 13248571
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13248515 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 13248571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 385 - 443
Target Start/End: Complemental strand, 18641047 - 18640989
Alignment:
Q  385 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  18641047 tctgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 18640989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 13211211 - 13211267
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  13211211 tgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 13211267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 17136137 - 17136193
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  17136137 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 17136193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 386 - 437
Target Start/End: Complemental strand, 10579654 - 10579603
Alignment:
Q  386 ctgttggaataagccataatagccaatctatattgattgggtttggctttgt 437  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  10579654 ctgttggaataagccctaatagccaatctatattgattgggtttgactttgt 10579603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 15607729 - 15607672
Alignment:
Q  387 tgttggaataagccataatagccaatctata-ttgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| |||||||||||||||| || |||||||||||||||||||||||    
T  15607729 tgttggaataagccctaatagccaatctatattttattgggtttggctttgtatcatg 15607672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 386 - 443
Target Start/End: Complemental strand, 16482783 - 16482727
Alignment:
Q  386 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  16482783 ctgttagaataagccctaata-ccaatctatattgattgggtttggctttgtatcatg 16482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 526
Target Start/End: Original strand, 18510924 - 18510969
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtc 526  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  18510924 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 18510969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 15351293 - 15351237
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| |||||||||||||||| ||||||  |||||||||||||||||    
T  15351293 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15351237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 15357885 - 15357829
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| |||||||||||||||| ||||||  |||||||||||||||||    
T  15357885 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15357829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 17200483 - 17200427
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||| |||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  17200483 tgttggagtaagccctaatagccaatctatgttgattgggtttggctttgtagcatg 17200427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 18519885 - 18519941
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||| |||| | |||||||||||||||||||||||||||||| |||||||||||    
T  18519885 tgttggagtaagtcctaatagccaatctatattgattgggtttggttttgtatcatg 18519941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 387 - 437
Target Start/End: Complemental strand, 10572890 - 10572840
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgt 437  Q
    |||||||||||||| |||||||||| |||||||||||||||||| ||||||    
T  10572890 tgttggaataagccctaatagccaacctatattgattgggtttgactttgt 10572840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 15601184 - 15601127
Alignment:
Q  387 tgttggaataagccataatagccaatctata-ttgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| |||||||||||||||| || ||||||||||| |||||||||||    
T  15601184 tgttggaataagccctaatagccaatctatattttattgggtttggatttgtatcatg 15601127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 1647824 - 1647768
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||| |||||| |||||||   ||||||||||||||||||||||||||||||||    
T  1647824 tgttggagtaagccctaatagctggtctatattgattgggtttggctttgtatcatg 1647768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 13516719 - 13516775
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||| |||||| ||||||||||||||| ||||||| |||||||| |||||||||    
T  13516719 tgttggagtaagccctaatagccaatctatgttgattgagtttggctgtgtatcatg 13516775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 17781414 - 17781358
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||| |||||| ||||||||||||||||||||||| |||||| ||| |||||||    
T  17781414 tgttggagtaagccctaatagccaatctatattgattgagtttggttttatatcatg 17781358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 19090041 - 19089985
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||| |||||| ||||||||||||||||||||||| |||||| ||| |||||||    
T  19090041 tgttggagtaagccctaatagccaatctatattgattgagtttggttttatatcatg 19089985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 32057200 - 32057144
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||| |||||  ||||||||||||||| ||||||||||||| ||||||||||||    
T  32057200 tgttggagtaagctctaatagccaatctatgttgattgggtttgactttgtatcatg 32057144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 18510829 - 18510885
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||| |||||| ||||| ||||||||||||||||| |||||  |||||||||||    
T  18510829 tgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18510885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 18522570 - 18522626
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||| |||||| ||||| ||||||||||||||||| |||||  |||||||||||    
T  18522570 tgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18522626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 395 - 443
Target Start/End: Original strand, 18534671 - 18534719
Alignment:
Q  395 taagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||| |||||| |||||||||||||||| |||||| |||||||||||    
T  18534671 taagccctaatagtcaatctatattgattgagtttggttttgtatcatg 18534719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 196; Significance: 1e-106; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 479 - 686
Target Start/End: Complemental strand, 7141 - 6934
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7141 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaactgtgag 7042  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7041 accctattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6942  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  6941 ctgatgat 6934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 479 - 686
Target Start/End: Complemental strand, 14157 - 13950
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  14157 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctacaatagttagtccgtttaatggaacattaagtataacttaactgtgag 14058  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  14057 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 13958  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  13957 ctgatgat 13950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 386 - 443
Target Start/End: Complemental strand, 14250 - 14193
Alignment:
Q  386 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  14250 ctgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 14193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 7233 - 7177
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| ||||||||||||||||||||||| |||||| |||||||||||    
T  7233 tgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 7177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 196; Significance: 1e-106; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 479 - 686
Target Start/End: Original strand, 21940665 - 21940872
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940665 acaatgcatttctttattgattttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21940764  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940765 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 21940864  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  21940865 ctgatgat 21940872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 175; E-Value: 8e-94
Query Start/End: Original strand, 481 - 686
Target Start/End: Original strand, 22171491 - 22171694
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22171491 aaggcatttccttattgattttgttttatttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 22171590  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 680  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22171591 cccattaaacata--gaaactattctcaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtaggtagact 22171688  T
Q  681 gatgat 686  Q
    ||||||    
T  22171689 gatgat 22171694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 488 - 686
Target Start/End: Original strand, 6094132 - 6094330
Alignment:
Q  488 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 587  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  6094132 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccgtta 6094231  T
Q  588 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||    
T  6094232 aacataaggaaactatttttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatatgggtagagtgatgat 6094330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 481 - 680
Target Start/End: Original strand, 28554885 - 28555084
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| ||||||||||||||||||| |||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28554885 aaggcatttctttattgattttgtttagtttcaaaataataaaatacctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28554984  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 680  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28554985 cccattaaacataatgaaactattctaaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 28555084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 488 - 686
Target Start/End: Original strand, 24642658 - 24642856
Alignment:
Q  488 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 587  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  24642658 ttctttattgattttgttttgtttcaaaatcataaagtccctagaattgttagtccgtttaatggaacattaagtataacttaattgtgagaccccgtta 24642757  T
Q  588 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||    
T  24642758 aacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgagatatcattaaagtatagagactattatgtgggtagactgatgat 24642856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 488 - 612
Target Start/End: Original strand, 24636863 - 24636987
Alignment:
Q  488 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 587  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  24636863 ttctttcttgattttgttttgtttcaaaataataaagtccctagaatagttagtccttttaatggaacattaagtataacttaattgtgagaccccgtta 24636962  T
Q  588 aacataaggaaactattctcaaagt 612  Q
    ||||||||||||||||||| |||||    
T  24636963 aacataaggaaactattcttaaagt 24636987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 491 - 683
Target Start/End: Complemental strand, 38232570 - 38232380
Alignment:
Q  491 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 590  Q
    ||||||||||||||||| ||||||||||||||| || ||||||||||||||| |||||||  |   ||| ||||||||||||  ||| || |||||||||    
T  38232570 tttattgattttgttttatttcaaaataataaa-tctctagaatagttagtctgtttaataaatttttaggtataacttaatcatgacactccattaaac 38232472  T
Q  591 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgat 683  Q
     |||  | | |||||| |||||||  |||||||| ||||||||  ||||| ||||   |||||||||| | |||||| ||| |||||||||||    
T  38232471 gtaa-aatagtattcttaaagtatttgtagtcaaactttattgtaaagtgagatagtcttaaagcataaaaactattttgtgggtagactgat 38232380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 386 - 443
Target Start/End: Original strand, 21940572 - 21940629
Alignment:
Q  386 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  21940572 ctgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 21940629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 22070108 - 22070164
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||    
T  22070108 tgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 22070164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 385 - 443
Target Start/End: Original strand, 6094029 - 6094087
Alignment:
Q  385 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  6094029 tctgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 6094087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 509 - 670
Target Start/End: Complemental strand, 32873019 - 32872857
Alignment:
Q  509 tttcaaaataataaagtccctagaatagttagtccgttta-atggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctc 607  Q
    ||||||||||||||||||| || |||||||  ||| |||| || ||||||||||||| |||||||||||||| | |||| || | |  || | || | |     
T  32873019 tttcaaaataataaagtccttataatagttcatccatttatatagaacattaagtatgacttaattgtgagatctcattgaaaagagtgacaatactatt 32872920  T
Q  608 aaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatg 670  Q
    ||| |||  ||||| ||| ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  32872919 aaaatatttgtagttaagatttattgtgaagtgggataacatcaaagcatagagactattatg 32872857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 22171396 - 22171452
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| |||||||||||||||||||||||||||||  |||||||||||    
T  22171396 tgttggaataagccctaatagccaatctatattgattgggtttgattttgtatcatg 22171452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 24642556 - 24642608
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtat 439  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  24642556 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtat 24642608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 28554791 - 28554847
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||| |||||| ||||||||||||| | ||||||||||||||||||||||||||    
T  28554791 tgttggagtaagccctaatagccaatctttgttgattgggtttggctttgtatcatg 28554847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 500 - 683
Target Start/End: Original strand, 2375027 - 2375208
Alignment:
Q  500 tttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaa 599  Q
    |||||||||||||||||||||||| |||||| |||| ||||||  |||||||||||||| |  || |||||||  ||| | ||||||||||||| | | |    
T  2375027 tttgttttgtttcaaaataataaactccctataataattagtcaatttaatggaacatttatgatgacttaatcatga-aacccattaaacatacgaata 2375125  T
Q  600 ctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgat 683  Q
     |||| | |||||||  ||||||| | ||||||| | |||| |||| |||||||| |||   ||||||| || |||||| ||||    
T  2375126 ttatttttaaagtatatgtagtcacgatttattgcg-agtgagataacattaaagtatatgaactattaagtgggtagattgat 2375208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 517 - 580
Target Start/End: Original strand, 10920234 - 10920297
Alignment:
Q  517 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    ||||||| | ||||||||| |||||| ||||||||||||||||||||| | ||||| |||||||    
T  10920234 taataaaattcctagaataattagtctgtttaatggaacattaagtatgagttaatcgtgagac 10920297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 386 - 424
Target Start/End: Original strand, 24636604 - 24636642
Alignment:
Q  386 ctgttggaataagccataatagccaatctatattgattg 424  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  24636604 ctgttggagtaagccataatagccaatctatattgattg 24636642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 575 - 686
Target Start/End: Complemental strand, 14984030 - 14983920
Alignment:
Q  575 tgagaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtagg 674  Q
    |||||||| |||||||   |||| | |||||| ||||||||  || ||||  ||||||| ||||||||||| |||| ||| |||| ||||||||||| ||    
T  14984030 tgagacccaattaaactataggacattattcttaaagtatctataatcaaaatttattgtgaagtgggataacatt-aagaatagggactattatgtggg 14983932  T
Q  675 tagactgatgat 686  Q
    |||||| |||||    
T  14983931 tagactaatgat 14983920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 196; Significance: 1e-106; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 479 - 686
Target Start/End: Original strand, 29308890 - 29309097
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29308890 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29308989  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29308990 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29309089  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  29309090 ctgatgat 29309097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 479 - 686
Target Start/End: Original strand, 29315850 - 29316057
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29315850 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29315949  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29315950 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29316049  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  29316050 ctgatgat 29316057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 481 - 686
Target Start/End: Complemental strand, 16566525 - 16566320
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566525 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16566426  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 680  Q
    ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566425 cccgttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 16566326  T
Q  681 gatgat 686  Q
    ||||||    
T  16566325 gatgat 16566320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 479 - 686
Target Start/End: Complemental strand, 27381459 - 27381252
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381459 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27381360  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381359 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27381260  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  27381259 ctgatgat 27381252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 479 - 686
Target Start/End: Complemental strand, 27471842 - 27471635
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471842 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27471743  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471742 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27471643  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  27471642 ctgatgat 27471635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 481 - 686
Target Start/End: Complemental strand, 17684674 - 17684469
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684674 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 17684575  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 680  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684574 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagact 17684475  T
Q  681 gatgat 686  Q
    ||||||    
T  17684474 gatgat 17684469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 479 - 686
Target Start/End: Complemental strand, 17691647 - 17691440
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691647 acaaggcatttctttattgattttgttttctttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 17691548  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  17691547 accccattaaacataaggaaactattcttaaagtatccgtagtcaagctttagtgagaagtgggatatcattaaagcataaagactattatgtaggtaga 17691448  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  17691447 ctgatgat 17691440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 481 - 686
Target Start/End: Complemental strand, 189182 - 188977
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  189182 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 189083  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 680  Q
    |||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  189082 cccattaaacataaggaaactattcttaaagtatttgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagact 188983  T
Q  681 gatgat 686  Q
    ||||||    
T  188982 gatgat 188977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 481 - 686
Target Start/End: Complemental strand, 25537364 - 25537159
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  25537364 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtccgtttaatggaacattaagtataactttattgtgagac 25537265  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 680  Q
    ||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25537264 cccgttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtagact 25537165  T
Q  681 gatgat 686  Q
    ||||||    
T  25537164 gatgat 25537159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 481 - 686
Target Start/End: Original strand, 11651725 - 11651930
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11651725 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 11651824  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 680  Q
    ||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  11651825 cccattaaaaataaggaaactattctaaaagtatcagtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagact 11651924  T
Q  681 gatgat 686  Q
    ||||||    
T  11651925 gatgat 11651930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 481 - 686
Target Start/End: Complemental strand, 13359474 - 13359269
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||| |||| ||    
T  13359474 aaggcatttatttatttattttgttttgtttcaaaataataaagtccctagaatagttagttcgcttaatggagcattaagtataacttaatcgtgaaac 13359375  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 680  Q
     |||||||||||||  | | |||| | ||||||||||||||||| |||||||| ||| ||||| | ||||||||| ||||||||||||| | | ||||||    
T  13359374 tccattaaacataaaaacattatttttaaagtatccgtagtcaacctttattgtgaaatgggacaacattaaagcgtagagactattatatggatagact 13359275  T
Q  681 gatgat 686  Q
    ||||||    
T  13359274 gatgat 13359269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 518 - 686
Target Start/End: Complemental strand, 20553755 - 20553587
Alignment:
Q  518 aataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccg 617  Q
    ||||||||| |||| |||| |||||||||||||| || ||||||||  ||||||| |||||| ||||||||| ||||| | | |||||| |||| |||||    
T  20553755 aataaagtctctaggatagctagtccgtttaatgaaatattaagtacgacttaatcgtgagatcccattaaatataagaatattattcttaaagcatccg 20553656  T
Q  618 tagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    |||| ||  ||||||| |||||| ||||  ||||||||||| ||| | |||||| ||||||||||||||    
T  20553655 tagtgaatttttattgtgaagtgagataaaattaaagcataaagatttttatgttggtagactgatgat 20553587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 502 - 686
Target Start/End: Original strand, 27925772 - 27925961
Alignment:
Q  502 tgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacat---taagtata--acttaattgtgagaccccattaaacataagg 596  Q
    |||||||||||||||||||||||||| |||||||  ||||  |||||| |||||||   ||||| |   ||||||| ||||||| |||||||||  |||     
T  27925772 tgttttgtttcaaaataataaagtccttagaataactagtatgtttaacggaacataattaagtgtgtgacttaatcgtgagactccattaaactaaaga 27925871  T
Q  597 aaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    ||| |||||| ||||||||  ||||||| |||||||  ||||||| ||| |||| ||||| | |||||||||||| | || |||||||||    
T  27925872 aaattattcttaaagtatctctagtcaaactttatttggaagtggtatagcattgaagcacaaagactattatgtggataaactgatgat 27925961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 498 - 671
Target Start/End: Original strand, 8509941 - 8510115
Alignment:
Q  498 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgaga-ccccattaaacataagg 596  Q
    ||||| |||||||| ||||||||||||||  ||||||| ||||||  ||| ||||||||||| |||  |||||||| ||||| |||||||||| || |||    
T  8509941 attttattttgttttaaaataataaagtctatagaataattagtctatttgatggaacattatgtacgacttaattatgagacccccattaaatatgagg 8510040  T
Q  597 aaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 671  Q
    |   |||| | |||||||  ||||| ||||||||||  ||| || |||| ||||||| |||| ||||||||||||    
T  8510041 atgatattattaaagtatatgtagttaagctttattatgaaatgagatagcattaaaacataaagactattatgt 8510115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 389 - 443
Target Start/End: Complemental strand, 17691737 - 17691683
Alignment:
Q  389 ttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  17691737 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 17691683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 517 - 686
Target Start/End: Complemental strand, 17850663 - 17850495
Alignment:
Q  517 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatcc 616  Q
    |||||||||||||| ||||| ||||  ||||  |||||||||| |||  |||||||||||| | || |||||| | ||||| |||||||| ||| |||||    
T  17850663 taataaagtccctataatagctagtttgtttgttggaacattatgtaagacttaattgtgatatccaattaaaaacaaggacactattcttaaattatcc 17850564  T
Q  617 gtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
     |||||||||||| ||| |||||   ||| |||| ||| ||| |||||||||| | ||||||||||||||    
T  17850563 atagtcaagcttt-ttgtgaagtcaaataacattcaagtatatagactattatatgggtagactgatgat 17850495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 27381551 - 27381495
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  27381551 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtttcatg 27381495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 27471934 - 27471878
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  27471934 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtttcatg 27471878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 29308798 - 29308854
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  29308798 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29308854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 29315758 - 29315814
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  29315758 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29315814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 385 - 441
Target Start/End: Original strand, 11651628 - 11651684
Alignment:
Q  385 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatca 441  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||    
T  11651628 tctgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatca 11651684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 17684768 - 17684712
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||    
T  17684768 tgttggaataagccctaatagccaatctatgttgaatgggtttggctttgtatcatg 17684712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 517 - 685
Target Start/End: Complemental strand, 20736773 - 20736604
Alignment:
Q  517 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaa-actattctcaaa-gtat 614  Q
    ||||||||| |||||||||| |||| ||| |||||| | ||||||| | |||||||  |||||   |||||| ||||| ||| | |||||| ||| ||||    
T  20736773 taataaagttcctagaatagatagttcgtgtaatggtatattaagtttgacttaatcatgagattacattaa-cataaagaacattattcttaaatgtat 20736675  T
Q  615 ccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatga 685  Q
    | |||||||||||||| | |||| |||||||  | |||||| | |||||||||||||| ||||||||||||    
T  20736674 ctgtagtcaagctttaataagaactgggataataataaagcgtcgagactattatgtatgtagactgatga 20736604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 25537461 - 25537405
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||| |||||| |||||||||||||||||||| || ||||||||||||||||||    
T  25537461 tgttggattaagccctaatagccaatctatattgactgagtttggctttgtatcatg 25537405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 488 - 541
Target Start/End: Complemental strand, 31258118 - 31258065
Alignment:
Q  488 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagt 541  Q
    |||||||||| |||||||||||||||||||||||||||| ||| |||| |||||    
T  31258118 ttctttattgcttttgttttgtttcaaaataataaagtctctaaaataattagt 31258065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 402 - 443
Target Start/End: Complemental strand, 13359553 - 13359512
Alignment:
Q  402 taatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||||||| |||||||||| ||||||||||||    
T  13359553 taatagccaatctatattcattgggtttgactttgtatcatg 13359512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 395 - 443
Target Start/End: Complemental strand, 16566611 - 16566563
Alignment:
Q  395 taagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||| ||||||||||||||| ||||||| ||||| ||||||||||||    
T  16566611 taagccctaatagccaatctatgttgattgagtttgactttgtatcatg 16566563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 414 - 443
Target Start/End: Complemental strand, 189250 - 189221
Alignment:
Q  414 tatattgattgggtttggctttgtatcatg 443  Q
    ||||||||||||||||||||||||||||||    
T  189250 tatattgattgggtttggctttgtatcatg 189221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 402 - 443
Target Start/End: Complemental strand, 16394525 - 16394484
Alignment:
Q  402 taatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||| |||||||||||||||| ||||| ||||||||||||    
T  16394525 taatagacaatctatattgattgagtttgactttgtatcatg 16394484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 495 - 560
Target Start/End: Complemental strand, 22259990 - 22259925
Alignment:
Q  495 ttgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaa 560  Q
    ||||||||||| |||| |||||||||||| |||||| ||||  |||||| ||||||  ||||||||    
T  22259990 ttgattttgttatgttgcaaaataataaactccctaaaataactagtccatttaatataacattaa 22259925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 196; Significance: 1e-106; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 479 - 686
Target Start/End: Complemental strand, 21330455 - 21330248
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330455 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21330356  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  21330355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtgga 21330256  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  21330255 ctgatgat 21330248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 498 - 686
Target Start/End: Original strand, 18796525 - 18796713
Alignment:
Q  498 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 597  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||    
T  18796525 attttgttttgtttcaaaataacaaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacctcttttaacataagga 18796624  T
Q  598 aactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
     | |||||| ||| |||| ||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||| ||||||||||||||    
T  18796625 tattattcttaaattatctgtagtcaagctttattgtgaagtggtatatcattaaagcattgagactattatgtgggtagactgatgat 18796713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 488 - 686
Target Start/End: Original strand, 18619814 - 18620011
Alignment:
Q  488 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 587  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||| ||||| |||||||    
T  18619814 ttctttgttgattttgttttgtttcaaaataataaagtccctataataattagtctgtttaatggagcattaagtgtgacttaattatgaga-cccatta 18619912  T
Q  588 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    |||| ||||| | |||||| |||||||| || ||||| |||||||| |||  ||||||  ||||||||||| |||||||||||| ||||| | ||||||    
T  18619913 aacaaaaggatattattcttaaagtatctgtggtcaaactttattgtgaaaagggataatattaaagcatatagactattatgtgggtaggccgatgat 18620011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 488 - 624
Target Start/End: Complemental strand, 19692734 - 19692598
Alignment:
Q  488 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 587  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||  | |||||||  ||||| | |||||    
T  19692734 ttctttattgattttgttttgtttcaaaataatgaagtccctagaataattagtctgtttaatggaacattaagcctgacttaatcatgagatctcatta 19692635  T
Q  588 aacataaggaaactattctcaaagtatccgtagtcaa 624  Q
    |||  ||||||| |||||| ||||||||| |||||||    
T  19692634 aactaaaggaaattattcttaaagtatccttagtcaa 19692598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 544 - 671
Target Start/End: Original strand, 20977957 - 20978084
Alignment:
Q  544 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtggga 643  Q
    |||||||||||||||||| |||| |||||  ||||| ||||||||| ||||||||| |||||| |||  |||||||||||||||||| || |||||| ||    
T  20977957 gtttaatggaacattaagaataatttaatcatgagatcccattaaaaataaggaaattattcttaaaacatccgtagtcaagctttaatgtgaagtgaga 20978056  T
Q  644 tatcattaaagcatagagactattatgt 671  Q
    ||||| ||||||||||||||||||||||    
T  20978057 tatcactaaagcatagagactattatgt 20978084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 513 - 686
Target Start/End: Original strand, 36270199 - 36270373
Alignment:
Q  513 aaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaag 611  Q
    |||||||||||||||||||||||||||||    |||| || ||  |||||| | ||||||| |||||||  ||||||||| || || |||||||| |||     
T  36270199 aaaataataaagtccctagaatagttagtttacttaaatgaaatgttaagtgtgacttaatcgtgagacatcattaaacacaatgacactattcttaaaa 36270298  T
Q  612 tatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
     ||||||| |||||||||| || |||| |||||| |||||||| ||| |||||||| ||| ||||||||||||||    
T  36270299 catccgtaatcaagctttagtgtgaagagggataacattaaagtataaagactattgtgtgggtagactgatgat 36270373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 21330549 - 21330493
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  21330549 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 21330493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 513 - 686
Target Start/End: Original strand, 18822115 - 18822290
Alignment:
Q  513 aaaataataaagtccctagaatagttagtccgtttaa-tggaaca-ttaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaa 610  Q
    ||||||||||||||  |||||| |||||| ||||||| ||||| | |||||| |  |||||| ||||||| |||||||||| ||||| |||||||| |||    
T  18822115 aaaataataaagtctatagaattgttagttcgtttaaatggaaaaattaagtgtggcttaatcgtgagacaccattaaacacaaggacactattcttaaa 18822214  T
Q  611 gtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
      ||  ||| |||||||||| |  |||||||||||||||||||||| | ||| ||||||||   ||||||||||||    
T  18822215 acatatgtaatcaagctttagtttgaagtgggatatcattaaagcagatagattattatgtcaatagactgatgat 18822290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 19692829 - 19692773
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||| |||||| ||||||||||||| |||| ||| ||||||| |||||||||||    
T  19692829 tgttggagtaagccttaatagccaatctgtatttattaggtttggttttgtatcatg 19692773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 515 - 670
Target Start/End: Complemental strand, 36802820 - 36802664
Alignment:
Q  515 aataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagta 613  Q
    ||||||||||||| | ||||||||| | ||||||| ||||| ||||| | | |||||||||  |||   ||||||||| || || | |||||| |||  |    
T  36802820 aataataaagtcctttgaatagttaattcgtttaaatggaatattaaatgttacttaattgcaagatatcattaaacacaatgacattattcttaaaaca 36802721  T
Q  614 tccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatg 670  Q
    |||||| ||||| || | ||  |||||||||| |||||||||||| ||| |||||||    
T  36802720 tccgtaatcaagattcagtgtaaagtgggataacattaaagcatatagattattatg 36802664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 599 - 686
Target Start/End: Complemental strand, 12098705 - 12098618
Alignment:
Q  599 actattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    |||||| | ||||||| |||||||||| |||| |  ||| | |||||  | |||| |||||||||||||||||| |||||||||||||    
T  12098705 actatttttaaagtattcgtagtcaagttttaatatgaaattggatagtaataaaacatagagactattatgtatgtagactgatgat 12098618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 599 - 686
Target Start/End: Complemental strand, 18852146 - 18852059
Alignment:
Q  599 actattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    |||||||| |||||||  |||||| | |||||||| ||||| ||||| |||||||   || |||||||||||| |||||||| |||||    
T  18852146 actattcttaaagtatatgtagtccaactttattgtgaagtaggataacattaaattgtatagactattatgtcggtagactaatgat 18852059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 521 - 671
Target Start/End: Complemental strand, 24471792 - 24471643
Alignment:
Q  521 aaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtag 620  Q
    |||||||||| |||| |||||| ||||||| |  ||||| || | |||||||||||||||  ||||  ||||||| | | ||||||  |||||||| ||     
T  24471792 aaagtccctaaaatatttagtcggtttaatagc-cattatgtgtgacttaattgtgagacatcatttgacataagaacattattctttaagtatccatac 24471694  T
Q  621 tcaagctttattgagaagtgggatatcattaaagcatagagactattatgt 671  Q
     ||| || ||||   |||||||||| || ||||||||| ||||||||||||    
T  24471693 acaaactctattttaaagtgggataacactaaagcataaagactattatgt 24471643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 617 - 686
Target Start/End: Complemental strand, 22183552 - 22183483
Alignment:
Q  617 gtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    |||||||||||||| || |||   ||||| |||||||| ||||||||||||| || |||||| |||||||    
T  22183552 gtagtcaagctttagtgtgaaaatggataacattaaagtatagagactattacgtgggtagattgatgat 22183483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 192; Significance: 1e-104; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 479 - 686
Target Start/End: Original strand, 18288 - 18495
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  18288 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaattgaacattaagtataacttaattgtgag 18387  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18388 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18487  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  18488 ctgatgat 18495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 386 - 443
Target Start/End: Original strand, 18195 - 18252
Alignment:
Q  386 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18195 ctgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 188; Significance: 1e-101; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 479 - 686
Target Start/End: Original strand, 7107 - 7314
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7107 acaaggtatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatagaacattaagtataacttaattgtgag 7206  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7207 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 7306  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  7307 ctgatgat 7314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 7015 - 7071
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||    
T  7015 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 7071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 188; Significance: 1e-101; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 479 - 686
Target Start/End: Complemental strand, 24695673 - 24695466
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695673 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 24695574  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  24695573 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgagatatcaataaagcatagagactattatgtaggtaga 24695474  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  24695473 ctgatgat 24695466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 479 - 686
Target Start/End: Complemental strand, 18570070 - 18569863
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18570070 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaattgaacattaagtataacttaattgtgag 18569971  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||    
T  18569970 accccgttaaacataaggaaactactcttaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcataaagactattatgttggtaga 18569871  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  18569870 ctgatgat 18569863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 481 - 686
Target Start/End: Complemental strand, 19714703 - 19714498
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19714703 aaggcatttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 19714604  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 680  Q
    ||| |||||||||||||| ||||||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  19714603 cccgttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagact 19714504  T
Q  681 gatgat 686  Q
    ||||||    
T  19714503 gatgat 19714498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 488 - 686
Target Start/End: Complemental strand, 19707416 - 19707218
Alignment:
Q  488 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 587  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||    
T  19707416 ttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgagaccccgtta 19707317  T
Q  588 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    ||||||||||| ||||||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  19707316 aacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagactgatgat 19707218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 488 - 667
Target Start/End: Complemental strand, 27347675 - 27347497
Alignment:
Q  488 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 587  Q
    |||||| |||||||||||||| |||||||||||||||||| ||||||| ||| || |||||||||| |||||||| | ||||||| |||||| |||||||    
T  27347675 ttctttgttgattttgttttgattcaaaataataaagtccttagaataattaatctgtttaatggagcattaagtgtgacttaatcgtgaga-cccatta 27347577  T
Q  588 aacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactatt 667  Q
    |||  ||||| | |||||| |||||||  ||||||||||||||||| |||  |||||| |||||||||||||||||||||    
T  27347576 aacgaaaggacattattcttaaagtatatgtagtcaagctttattgtgaaaagggataacattaaagcatagagactatt 27347497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 491 - 686
Target Start/End: Complemental strand, 22547211 - 22547016
Alignment:
Q  491 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 590  Q
    |||||| |||||||||| ||| |||||||||||  | ||| ||||||||||| ||||||||||||||||||||||||||||| |||||| | |||||||     
T  22547211 tttattcattttgttttattttaaaataataaaaccgctataatagttagtcggtttaatggaacattaagtataacttaatcgtgagatctcattaaat 22547112  T
Q  591 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    ||| ||| | |||| | ||||||| || |||||| |||||||| |||||| |||| |||||||  |||||||||||||||| | ||||| ||||||    
T  22547111 atatggacattatttttaaagtattcgcagtcaaactttattgtgaagtgagataacattaaaatatagagactattatgtggatagaccgatgat 22547016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 479 - 588
Target Start/End: Original strand, 39537962 - 39538071
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    ||||| || ||||||| ||||||||||||||||||||||  | |||||| |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  39537962 acaagccatttctttaatgattttgttttgtttcaaaatggttaagtccttagaatagttggttcgtttaatggaacattaagtataacttaattgtgag 39538061  T
Q  579 accccattaa 588  Q
    ||| ||||||    
T  39538062 acctcattaa 39538071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 491 - 664
Target Start/End: Complemental strand, 17285927 - 17285754
Alignment:
Q  491 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 590  Q
    ||||||||||||||| ||||||||||||||||  |||  ||||||||||||| ||||||||||||||||||| | ||||||| |||| |||| | |||||    
T  17285927 tttattgattttgttatgtttcaaaataataatctccagagaatagttagtctgtttaatggaacattaagtgtgacttaatcgtgaaaccctagtaaac 17285828  T
Q  591 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagact 664  Q
      || || | |||||| ||||||| | ||||| | |||||||| ||| |||||||  ||||||||||| |||||    
T  17285827 taaatgacattattcttaaagtattcatagtcgatctttattgtgaattgggatagtattaaagcatatagact 17285754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 545 - 686
Target Start/End: Complemental strand, 18807175 - 18807034
Alignment:
Q  545 tttaatggaacattaagtataacttaattgtgagaccccattaaacataa-ggaaactattctcaaagtatccgtagtcaagctttattgagaagtggga 643  Q
    |||||||||||||||||| | ||||||| ||||||| |||||||| |||| ||| | |||||| ||||||||  ||||||||| |||||| |||||  ||    
T  18807175 tttaatggaacattaagtgtgacttaatcgtgagacaccattaaa-ataatggacattattcttaaagtatctatagtcaagcgttattgtgaagtaaga 18807077  T
Q  644 tatcattaaagcatagagactattatgtaggtagactgatgat 686  Q
    || || |||||||||||||||||||||  ||||||||||||||    
T  18807076 taacaataaagcatagagactattatgcgggtagactgatgat 18807034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 592 - 684
Target Start/End: Original strand, 39538701 - 39538793
Alignment:
Q  592 taaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 684  Q
    |||||| |||||||| ||| ||||| |||| ||||||||||| |||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  39538701 taaggacactattcttaaaatatccatagttaagctttattgtgaagtgggatatcattaaagcatgaagactattatgtgggtagactgatg 39538793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 491 - 664
Target Start/End: Complemental strand, 17299080 - 17298907
Alignment:
Q  491 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 590  Q
    ||||||||||||||| |||||  |||||||||  |||  ||||||||||||||| |||||||||||||||||   ||||||| |||| |||| | |||||    
T  17299080 tttattgattttgttatgtttataaataataatatccagagaatagttagtccgattaatggaacattaagtgcgacttaatcgtgaaaccctagtaaac 17298981  T
Q  591 ataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagact 664  Q
      || || | |||||| ||||||| | ||||| | ||||||||  ||||||||||  ||||||||||| |||||    
T  17298980 taaatgacattattcttaaagtattcatagtcgatctttattgttaagtgggatagtattaaagcatatagact 17298907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 24695765 - 24695709
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  24695765 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 24695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 488 - 588
Target Start/End: Original strand, 31886540 - 31886640
Alignment:
Q  488 ttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatta 587  Q
    ||||||| |||||||||||||||||||| ||||||||||| ||||||| ||||| | |||||| |||||| |||||  ||||||| ||||||| ||||||    
T  31886540 ttctttagtgattttgttttgtttcaaattaataaagtccttagaataattagttcatttaattgaacatcaagtacgacttaatcgtgagactccatta 31886639  T
Q  588 a 588  Q
    |    
T  31886640 a 31886640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 386 - 443
Target Start/End: Complemental strand, 19714799 - 19714742
Alignment:
Q  386 ctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19714799 ctgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 19714742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 385 - 443
Target Start/End: Complemental strand, 27347780 - 27347722
Alignment:
Q  385 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  27347780 tctgttggagtaagccctaatagccaatctatattgattgcgtttggctttgtatcatg 27347722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 19707518 - 19707462
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||| |||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  19707518 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 19707462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 505 - 595
Target Start/End: Complemental strand, 33477479 - 33477389
Alignment:
Q  505 tttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataag 595  Q
    ||||||||||||||||||||||| || ||||||||| | | |||||||| |||||||| | |  |||| |||||||| |||||| ||||||    
T  33477479 tttgtttcaaaataataaagtccttacaatagttaggctgattaatggatcattaagtgtgatctaatcgtgagacctcattaatcataag 33477389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 402 - 443
Target Start/End: Complemental strand, 18570149 - 18570108
Alignment:
Q  402 taatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||| |||||||||| |||||||||||||||||||||||    
T  18570149 taatagctaatctatattaattgggtttggctttgtatcatg 18570108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 387 - 442
Target Start/End: Original strand, 39537870 - 39537925
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcat 442  Q
    ||||||| |||||| ||||||||||||||| |||| || |||| ||||||||||||    
T  39537870 tgttggattaagccctaatagccaatctatgttgactgagtttagctttgtatcat 39537925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 529 - 597
Target Start/End: Original strand, 11479420 - 11479489
Alignment:
Q  529 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc-cattaaacataagga 597  Q
    ||||||| |||||  |||||||| || ||||||| | |||| |||||||||||| |||||||||||||||    
T  11479420 tagaataattagtgtgtttaatgaaatattaagtgtgacttgattgtgagaccctcattaaacataagga 11479489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 184; Significance: 3e-99; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 479 - 686
Target Start/End: Original strand, 993 - 1200
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  993 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctaaaatagttagtccgtttaatgaaacattaagtataacttaattgtgag 1092  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1093 accccattaaacataaagaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 1192  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  1193 ctgatgat 1200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 901 - 957
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  901 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 180; Significance: 8e-97; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 479 - 686
Target Start/End: Complemental strand, 26197 - 25990
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 578  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  26197 acaagacatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccatttaatggaacattaaatataacttaattgtgag 26098  T
Q  579 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 678  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  26097 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgaaaagtgggatatcattaaagcatagcgactattatgtaggtaga 25998  T
Q  679 ctgatgat 686  Q
    ||||||||    
T  25997 ctgatgat 25990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 387 - 442
Target Start/End: Complemental strand, 26286 - 26231
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcat 442  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  26286 tgttggaataagccctaatagtcaatctatattgattgggtttggctttgtatcat 26231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 166; Significance: 2e-88; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 481 - 686
Target Start/End: Original strand, 5531 - 5736
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5531 aaggcatttctttattgatttatttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 5630  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 680  Q
    ||| ||||||||||||||| |||||| |||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  5631 cccgttaaacataaggaaattattcttaaagtatatgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagact 5730  T
Q  681 gatgat 686  Q
    ||||||    
T  5731 gatgat 5736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 395 - 443
Target Start/End: Original strand, 5444 - 5492
Alignment:
Q  395 taagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  5444 taagccctaatagccaatctatattgtttgggtttggctttgtatcatg 5492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 138; Significance: 9e-72; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 481 - 662
Target Start/End: Complemental strand, 230545 - 230365
Alignment:
Q  481 aaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 580  Q
    |||||| |||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  230545 aaggcatttctttattgattttgttttgtttcaaaataataaagttcttataatagttagtccgtttaatggaacattaagtataacttaattgtgagac 230446  T
Q  581 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagaga 662  Q
    ||| |||||||||||||||| ||||| |||||||  ||||||||| ||||||||||||||||||||||||||||||||||||    
T  230445 ccc-ttaaacataaggaaaccattcttaaagtatttgtagtcaagatttattgagaagtgggatatcattaaagcatagaga 230365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 385 - 443
Target Start/End: Complemental strand, 230642 - 230584
Alignment:
Q  385 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  230642 tctgttggagtaagcaataatagccaatctatattgattgggtttggctttgtatcatg 230584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 479 - 543
Target Start/End: Complemental strand, 8510 - 8446
Alignment:
Q  479 acaaggcaattctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 543  Q
    ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8510 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 8446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 8602 - 8546
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  8602 tgttggaataagccctaatagccaatctatattgattgggttcggctttgtatcatg 8546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 23825 - 23769
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23825 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 23769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 16523 - 16579
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  16523 tgttggaataagccctaatagccaatctatattgattgggtttggctttatatcatg 16579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 385 - 443
Target Start/End: Original strand, 8942 - 9000
Alignment:
Q  385 tctgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||||||||||||||  |||||||||||||| |||| |||||||||||||||||||||    
T  8942 tctgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 9000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0705 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 97 - 41
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    |||||||||||||| |||||||||||||||| ||||||  |||||||||||||||||    
T  97 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 41  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 387 - 439
Target Start/End: Original strand, 5878 - 5930
Alignment:
Q  387 tgttggaataagccataatagccaatctatattgattgggtttggctttgtat 439  Q
    ||||||| |||| ||||||||||||||||||||||||| ||||| ||||||||    
T  5878 tgttggagtaagtcataatagccaatctatattgattgagtttgactttgtat 5930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 389 - 443
Target Start/End: Complemental strand, 10256 - 10202
Alignment:
Q  389 ttggaataagccataatagccaatctatattgattgggtttggctttgtatcatg 443  Q
    ||||| |||||  ||||||||||||||||||||||| ||||| ||||||||||||    
T  10256 ttggagtaagctctaatagccaatctatattgattgagtttgactttgtatcatg 10202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 498 - 529
Target Start/End: Complemental strand, 10158 - 10127
Alignment:
Q  498 attttgttttgtttcaaaataataaagtccct 529  Q
    ||||||||||||||||||||||||||||||||    
T  10158 attttgttttgtttcaaaataataaagtccct 10127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 386 - 423
Target Start/End: Complemental strand, 38 - 1
Alignment:
Q  386 ctgttggaataagccataatagccaatctatattgatt 423  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  38 ctgttggaataagccctaatagccaatctatattgatt 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 508 - 580
Target Start/End: Original strand, 92194 - 92267
Alignment:
Q  508 gtttcaaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagac 580  Q
    |||| ||| |||||||||| ||||||||  ||||   ||||| ||||||||||||||||||||||| |||||||    
T  92194 gttttaaagtaataaagtctctagaatatctagttattttaaatggaacattaagtataacttaatcgtgagac 92267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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