View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13904_high_23 (Length: 240)
Name: NF13904_high_23
Description: NF13904
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13904_high_23 |
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Alignment Details
Target: chr7 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 15 - 224
Target Start/End: Original strand, 35471051 - 35471260
Alignment:
| Q |
15 |
cataggtatgaaaacttacaagacaaaaatcttgtaaaccacatgtaatgtaatatattgtagggcatatgaaacaaacaaaccaactgtctaatcctaa |
114 |
Q |
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| T |
35471051 |
cataggtatgaaaacttacaagacaaaaatcttggaaaccacatgtaatgtaatatattgtagggcatatgaaacaaacaaaccaactgtctaatcctaa |
35471150 |
T |
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| Q |
115 |
tttgattctctccatccaccaacccaactcaacccaaccctaagcttatacacctaaaatttaaatttttaagagtaggaggagaaggttctgttcctaa |
214 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35471151 |
tttgattctctccatccaccaaccctactcaacccaaccctaagcttatacacctaaaatttaaatttttaagagtaggaggagaaggttctgttcctaa |
35471250 |
T |
|
| Q |
215 |
aggtactagt |
224 |
Q |
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|||||||||| |
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| T |
35471251 |
aggtactagt |
35471260 |
T |
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