View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1390R-Insertion-6 (Length: 666)
Name: NF1390R-Insertion-6
Description: NF1390R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1390R-Insertion-6 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 578; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 578; E-Value: 0
Query Start/End: Original strand, 7 - 666
Target Start/End: Original strand, 40369447 - 40370106
Alignment:
| Q |
7 |
catatctatgttggccagcattttttaccgaggcctaccaattggaaaccaaagtcttctcaacttgatttgattaattataaattaatttaatccaact |
106 |
Q |
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| T |
40369447 |
catatctatgttggccagcattttttaccaaggcctaccaattggaaaccaaagtcttctcaacttgatttgattaattataaattaatttaatccaact |
40369546 |
T |
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| Q |
107 |
tgacttccaagggatacagccaaattaagtctatgtgtatattttagtagccgtaannnnnnngtttgatatgtctatcaatgtctctttttcgacaaga |
206 |
Q |
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| T |
40369547 |
tgacttccaagggatacagccaaattaagtctatgtgtatattttagtagccgtaatttttttgtttgatatgtctatcaatggggtttttttgacaaaa |
40369646 |
T |
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| Q |
207 |
gaaaatcttaatatgataattgcaagaggataacaaaaagaatttgatctttctattttttggttgcttaaaggattggattactttagaacgagtttag |
306 |
Q |
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| T |
40369647 |
gaaaatcttaatatgataattgcaagaggataacaaaaagaatttgatctttctattttttggttgcttaaaggattggattactttagaacgagtttag |
40369746 |
T |
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| Q |
307 |
agtataaagtatgaaacaattgtcatnnnnnnnttatggaatcaaaattttattcataaattatacaaaataagtttttggcaataaattttctagtcgg |
406 |
Q |
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| T |
40369747 |
agtataaagtatgaaacaattgtcataaaaaaattatggaatcaaaattttattcataaattatacaaaataagtttttggcaataaattttctagtcgg |
40369846 |
T |
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| Q |
407 |
tagtcatgaaaatttgttaatttggatttcaataaaattgaattataaattgttttacgtacgaatgaatgaaacacttgaactttatttaaatgcacaa |
506 |
Q |
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| T |
40369847 |
tagtcatgaaaatttgttaatttggatttcaataaaattgaattataaattgttctacgtacgaatgaatgaaacacttgaactttatttaaatgcacaa |
40369946 |
T |
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| Q |
507 |
aggaaagctagctgaaaattgtgcatctatatagtgtagaatgggaagcatctagttcaattgctgttgtccacttatattcacaacgaacgattaaaag |
606 |
Q |
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| T |
40369947 |
aggaaagctagctgaaaattgtgcatctatatagtgcagaatgggaagcatctagttcaattgctgttgtccacttaaattcacaacgaacgattaaaag |
40370046 |
T |
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| Q |
607 |
aaaaagttaacactcacaaattgacaataatttgatcgaatatatagttgaagacgtccc |
666 |
Q |
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| T |
40370047 |
aaaaagttaacactcacaaattgacaataatttgatcgaatatatagttgaagacgtccc |
40370106 |
T |
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