View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1390_low_184 (Length: 207)
Name: NF1390_low_184
Description: NF1390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1390_low_184 |
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Alignment Details
Target: chr2 (Bit Score: 134; Significance: 6e-70; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 45362591 - 45362724
Alignment:
| Q |
1 |
catggagaaaggtatgcacaattaatcctgctgtaaccagatagattgatcaacgtcatgtgcatggcaatgagacataaaggaaacatattaaaagaag |
100 |
Q |
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| T |
45362591 |
catggagaaaggtatgcacaattaatcctgctgtaaccagatagattgatcaacgtcatgtgcatggcaatgagacataaaggaaacatattaaaagaag |
45362690 |
T |
|
| Q |
101 |
ggataagggattaaagttcctcgaatctctgctc |
134 |
Q |
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| T |
45362691 |
ggataagggattaaagttcctcgaatctctgctc |
45362724 |
T |
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