View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13912_low_22 (Length: 410)

Name: NF13912_low_22
Description: NF13912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13912_low_22
NF13912_low_22
[»] chr6 (35 HSPs)
chr6 (1-154)||(12576342-12576495)
chr6 (1-154)||(11426041-11426194)
chr6 (1-154)||(23843285-23843439)
chr6 (1-154)||(13233969-13234123)
chr6 (1-154)||(19759887-19760041)
chr6 (6-154)||(8633062-8633206)
chr6 (1-154)||(20845107-20845261)
chr6 (1-154)||(16913427-16913578)
chr6 (13-154)||(7049344-7049486)
chr6 (1-154)||(548727-548881)
chr6 (1-154)||(32457745-32457898)
chr6 (6-154)||(31748056-31748205)
chr6 (12-154)||(10744682-10744824)
chr6 (12-154)||(32804394-32804537)
chr6 (12-122)||(31804352-31804462)
chr6 (6-154)||(4663686-4663835)
chr6 (12-115)||(20496332-20496435)
chr6 (9-122)||(15127998-15128111)
chr6 (8-124)||(8644375-8644491)
chr6 (12-125)||(5544836-5544949)
chr6 (8-119)||(1944231-1944342)
chr6 (6-154)||(33541397-33541544)
chr6 (9-150)||(34020708-34020848)
chr6 (23-125)||(904397-904499)
chr6 (83-154)||(5417141-5417213)
chr6 (13-154)||(22530379-22530520)
chr6 (47-154)||(33194704-33194812)
chr6 (9-56)||(892482-892529)
chr6 (101-154)||(15128114-15128168)
chr6 (8-125)||(12652069-12652182)
chr6 (96-154)||(545985-546043)
chr6 (96-154)||(1523363-1523421)
chr6 (8-59)||(8694145-8694196)
chr6 (12-48)||(5417096-5417132)
chr6 (91-154)||(30776627-30776690)
[»] chr3 (56 HSPs)
chr3 (1-154)||(3088525-3088678)
chr3 (1-154)||(28995170-28995323)
chr3 (1-154)||(41882271-41882424)
chr3 (1-154)||(22286612-22286765)
chr3 (1-154)||(43029782-43029936)
chr3 (1-154)||(1165257-1165411)
chr3 (1-133)||(50519904-50520036)
chr3 (1-154)||(33977786-33977939)
chr3 (1-154)||(29182471-29182623)
chr3 (1-154)||(45664320-45664474)
chr3 (1-154)||(47914454-47914608)
chr3 (10-154)||(54240185-54240330)
chr3 (8-153)||(20200926-20201072)
chr3 (8-153)||(20203108-20203254)
chr3 (13-154)||(20251756-20251898)
chr3 (8-154)||(4019694-4019844)
chr3 (1-154)||(43839378-43839533)
chr3 (49-154)||(14741234-14741340)
chr3 (6-153)||(40797133-40797281)
chr3 (6-125)||(913182-913301)
chr3 (12-154)||(22844151-22844294)
chr3 (13-154)||(35501632-35501774)
chr3 (1-151)||(7656381-7656527)
chr3 (1-119)||(11846684-11846801)
chr3 (13-154)||(32237869-32238011)
chr3 (1-154)||(21803629-21803784)
chr3 (8-154)||(53426897-53427044)
chr3 (12-154)||(29776562-29776705)
chr3 (1-119)||(33076419-33076538)
chr3 (9-154)||(25939348-25939494)
chr3 (12-148)||(42106245-42106380)
chr3 (8-154)||(21585998-21586145)
chr3 (8-154)||(32089798-32089945)
chr3 (9-154)||(22893584-22893730)
chr3 (16-154)||(36540550-36540688)
chr3 (6-80)||(37051768-37051842)
chr3 (9-154)||(40461864-40462010)
chr3 (8-121)||(39340332-39340445)
chr3 (12-118)||(34767122-34767228)
chr3 (14-80)||(48060963-48061029)
chr3 (13-103)||(50460341-50460431)
chr3 (8-64)||(27831289-27831345)
chr3 (12-123)||(2598210-2598320)
chr3 (6-154)||(40365325-40365473)
chr3 (8-65)||(25373950-25374007)
chr3 (1-118)||(33793903-33794019)
chr3 (8-117)||(43242945-43243054)
chr3 (8-100)||(26412442-26412536)
chr3 (7-154)||(1220117-1220262)
chr3 (97-154)||(27706304-27706361)
chr3 (13-73)||(35670594-35670654)
chr3 (96-154)||(7546567-7546625)
chr3 (14-42)||(28876704-28876732)
chr3 (8-48)||(33069860-33069900)
chr3 (9-37)||(48212557-48212585)
chr3 (91-154)||(51923680-51923743)
[»] chr2 (65 HSPs)
chr2 (1-154)||(27191198-27191351)
chr2 (1-154)||(27841012-27841165)
chr2 (1-154)||(36508029-36508182)
chr2 (1-154)||(43566973-43567126)
chr2 (1-154)||(25516592-25516745)
chr2 (1-154)||(7640217-7640371)
chr2 (6-154)||(38822172-38822320)
chr2 (1-142)||(41176970-41177111)
chr2 (1-154)||(44167572-44167725)
chr2 (1-154)||(27024000-27024154)
chr2 (1-154)||(25771544-25771698)
chr2 (1-154)||(6089990-6090143)
chr2 (14-150)||(44951522-44951659)
chr2 (1-122)||(3465061-3465182)
chr2 (26-154)||(16879851-16879980)
chr2 (26-154)||(16991984-16992113)
chr2 (12-154)||(5930522-5930665)
chr2 (1-146)||(43929161-43929307)
chr2 (1-154)||(3390531-3390676)
chr2 (6-154)||(3603084-3603233)
chr2 (12-154)||(19580874-19581017)
chr2 (6-154)||(7443432-7443581)
chr2 (6-149)||(10589199-10589343)
chr2 (12-125)||(4878608-4878721)
chr2 (12-154)||(26491401-26491543)
chr2 (1-149)||(16720709-16720858)
chr2 (14-125)||(24500616-24500727)
chr2 (12-121)||(15673840-15673949)
chr2 (8-154)||(25622912-25623060)
chr2 (12-154)||(29734289-29734432)
chr2 (12-150)||(37883756-37883895)
chr2 (10-104)||(20036532-20036626)
chr2 (8-153)||(28228322-28228468)
chr2 (12-154)||(29812487-29812629)
chr2 (8-146)||(13268679-13268818)
chr2 (14-153)||(25237205-25237340)
chr2 (13-151)||(19953672-19953810)
chr2 (6-154)||(2251213-2251360)
chr2 (9-154)||(9715413-9715559)
chr2 (8-125)||(11550463-11550581)
chr2 (6-154)||(5071236-5071385)
chr2 (6-61)||(35353833-35353888)
chr2 (12-103)||(42105637-42105727)
chr2 (6-64)||(3397845-3397903)
chr2 (45-118)||(40125525-40125598)
chr2 (84-154)||(41842047-41842118)
chr2 (8-151)||(17068784-17068927)
chr2 (13-125)||(17118687-17118798)
chr2 (6-78)||(31125245-31125317)
chr2 (8-64)||(31262821-31262877)
chr2 (100-154)||(43929316-43929371)
chr2 (12-73)||(802960-803021)
chr2 (97-144)||(10589176-10589224)
chr2 (28-151)||(17095374-17095497)
chr2 (7-62)||(12366060-12366115)
chr2 (101-154)||(35353742-35353796)
chr2 (100-149)||(43929288-43929338)
chr2 (16-61)||(31268972-31269017)
chr2 (13-122)||(38105355-38105464)
chr2 (218-246)||(25516427-25516455)
chr2 (95-154)||(31269050-31269110)
chr2 (12-64)||(32347555-32347606)
chr2 (9-37)||(34471183-34471211)
chr2 (218-246)||(41176795-41176823)
chr2 (218-246)||(43566810-43566838)
[»] chr8 (49 HSPs)
chr8 (1-154)||(16996750-16996903)
chr8 (6-154)||(8054673-8054822)
chr8 (1-154)||(44295415-44295569)
chr8 (1-154)||(37129536-37129688)
chr8 (1-154)||(14115689-14115843)
chr8 (6-154)||(32412889-32413038)
chr8 (1-154)||(5457170-5457324)
chr8 (10-154)||(9270120-9270265)
chr8 (1-154)||(41996644-41996796)
chr8 (1-154)||(9992766-9992920)
chr8 (13-154)||(32104711-32104853)
chr8 (29-154)||(31874183-31874309)
chr8 (11-154)||(36545652-36545796)
chr8 (8-113)||(5328095-5328198)
chr8 (13-154)||(37659065-37659207)
chr8 (12-125)||(31712948-31713061)
chr8 (8-154)||(5917617-5917757)
chr8 (12-154)||(12248583-12248729)
chr8 (6-153)||(15665639-15665787)
chr8 (14-153)||(26937625-26937765)
chr8 (12-154)||(3925562-3925705)
chr8 (14-154)||(5989729-5989870)
chr8 (12-154)||(16937211-16937354)
chr8 (12-153)||(10042872-10043014)
chr8 (13-154)||(12244089-12244231)
chr8 (12-125)||(23766868-23766982)
chr8 (12-154)||(2629011-2629153)
chr8 (6-154)||(32061893-32062042)
chr8 (6-154)||(32256587-32256736)
chr8 (6-154)||(1215207-1215354)
chr8 (11-154)||(17019217-17019361)
chr8 (11-154)||(17549654-17549798)
chr8 (6-64)||(18190712-18190770)
chr8 (5-125)||(11298625-11298745)
chr8 (13-106)||(13977556-13977649)
chr8 (28-154)||(14327578-14327705)
chr8 (13-154)||(7281001-7281142)
chr8 (6-63)||(27534278-27534335)
chr8 (12-115)||(13864498-13864601)
chr8 (13-154)||(7269338-7269479)
chr8 (47-122)||(3681055-3681130)
chr8 (6-101)||(37719993-37720088)
chr8 (43-154)||(26582792-26582903)
chr8 (8-122)||(31147696-31147811)
chr8 (96-154)||(18890774-18890832)
chr8 (11-64)||(14919260-14919313)
chr8 (14-153)||(16938151-16938285)
chr8 (6-55)||(32920843-32920892)
chr8 (84-127)||(16809003-16809046)
[»] chr7 (56 HSPs)
chr7 (1-154)||(11001943-11002096)
chr7 (1-154)||(24475441-24475594)
chr7 (1-154)||(40775366-40775520)
chr7 (1-154)||(8611485-8611638)
chr7 (1-154)||(24470493-24470646)
chr7 (1-154)||(49167025-49167178)
chr7 (1-154)||(40476807-40476960)
chr7 (1-154)||(26017519-26017673)
chr7 (1-154)||(135006-135160)
chr7 (1-154)||(7985991-7986145)
chr7 (10-154)||(47749833-47749978)
chr7 (1-154)||(42490802-42490956)
chr7 (1-154)||(43807011-43807165)
chr7 (13-154)||(30992696-30992838)
chr7 (1-154)||(8319414-8319568)
chr7 (11-154)||(25855091-25855235)
chr7 (8-154)||(23732261-23732408)
chr7 (288-394)||(41459651-41459757)
chr7 (1-103)||(19895545-19895647)
chr7 (8-154)||(772542-772689)
chr7 (12-154)||(28015456-28015599)
chr7 (1-122)||(37399730-37399851)
chr7 (12-154)||(47156491-47156627)
chr7 (6-122)||(39090220-39090336)
chr7 (12-154)||(5024928-5025071)
chr7 (12-154)||(9933946-9934085)
chr7 (14-154)||(14707682-14707823)
chr7 (6-137)||(10250349-10250481)
chr7 (32-154)||(13008565-13008688)
chr7 (13-150)||(44681563-44681701)
chr7 (20-125)||(24045160-24045265)
chr7 (6-154)||(21552321-21552470)
chr7 (6-154)||(29804545-29804690)
chr7 (14-154)||(46918499-46918639)
chr7 (8-104)||(37890357-37890453)
chr7 (6-122)||(41748393-41748509)
chr7 (26-125)||(22751567-22751666)
chr7 (12-154)||(38649231-38649372)
chr7 (6-154)||(33530341-33530483)
chr7 (6-63)||(2532132-2532189)
chr7 (14-154)||(43483699-43483828)
chr7 (9-154)||(21329167-21329311)
chr7 (8-122)||(36350300-36350414)
chr7 (306-384)||(41373520-41373598)
chr7 (8-59)||(45949547-45949598)
chr7 (12-125)||(34893240-34893351)
chr7 (1-154)||(23177444-23177598)
chr7 (95-154)||(14734004-14734064)
chr7 (14-137)||(35135058-35135181)
chr7 (6-154)||(34594388-34594537)
chr7 (18-154)||(32312666-32312803)
chr7 (96-154)||(24350914-24350972)
chr7 (96-154)||(28476183-28476241)
chr7 (17-53)||(9934118-9934154)
chr7 (83-154)||(15123923-15123995)
chr7 (218-246)||(49166860-49166888)
[»] chr5 (47 HSPs)
chr5 (1-154)||(4070651-4070804)
chr5 (1-154)||(28618702-28618855)
chr5 (1-154)||(29310215-29310369)
chr5 (1-154)||(6887039-6887193)
chr5 (6-154)||(4726794-4726943)
chr5 (1-154)||(31645928-31646082)
chr5 (6-154)||(9034808-9034957)
chr5 (6-122)||(35906401-35906517)
chr5 (13-154)||(18472599-18472740)
chr5 (9-154)||(10924003-10924148)
chr5 (12-154)||(20270813-20270956)
chr5 (12-154)||(41554586-41554729)
chr5 (1-154)||(5378401-5378555)
chr5 (12-154)||(22397420-22397563)
chr5 (13-154)||(41063269-41063411)
chr5 (12-154)||(33486441-33486584)
chr5 (14-154)||(2415499-2415640)
chr5 (6-154)||(6647779-6647928)
chr5 (1-125)||(19645902-19646026)
chr5 (12-154)||(40774859-40775003)
chr5 (14-154)||(8812026-8812166)
chr5 (12-124)||(34844046-34844158)
chr5 (18-119)||(34893822-34893923)
chr5 (6-153)||(15710642-15710789)
chr5 (6-154)||(13007791-13007939)
chr5 (8-154)||(34873960-34874107)
chr5 (13-118)||(32387601-32387705)
chr5 (6-125)||(6074602-6074721)
chr5 (8-118)||(28500825-28500935)
chr5 (6-154)||(13079244-13079392)
chr5 (6-125)||(8957335-8957454)
chr5 (6-154)||(20146085-20146231)
chr5 (8-154)||(32390515-32390662)
chr5 (8-154)||(41988251-41988398)
chr5 (6-154)||(40565023-40565170)
chr5 (26-154)||(34866526-34866655)
chr5 (13-125)||(14910549-14910661)
chr5 (6-125)||(12524530-12524649)
chr5 (12-146)||(37425131-37425261)
chr5 (6-80)||(17325528-17325602)
chr5 (49-154)||(41358138-41358244)
chr5 (12-119)||(28388980-28389088)
chr5 (6-118)||(29154356-29154468)
chr5 (14-154)||(13080252-13080394)
chr5 (8-64)||(25770796-25770852)
chr5 (97-154)||(2979384-2979441)
chr5 (97-154)||(37425095-37425153)
[»] chr4 (64 HSPs)
chr4 (1-154)||(23067709-23067863)
chr4 (1-149)||(30469984-30470132)
chr4 (1-154)||(4634382-4634536)
chr4 (1-154)||(46716755-46716909)
chr4 (1-154)||(9661952-9662106)
chr4 (13-154)||(14542385-14542527)
chr4 (1-154)||(32189079-32189232)
chr4 (1-150)||(42972141-42972291)
chr4 (6-154)||(9474405-9474554)
chr4 (1-154)||(20961548-20961701)
chr4 (1-122)||(53903713-53903834)
chr4 (1-154)||(37869278-37869432)
chr4 (1-154)||(41486674-41486828)
chr4 (1-154)||(31601217-31601373)
chr4 (1-122)||(54420601-54420723)
chr4 (6-154)||(34115522-34115666)
chr4 (13-154)||(46728793-46728935)
chr4 (9-154)||(50003045-50003191)
chr4 (6-114)||(52555606-52555714)
chr4 (12-125)||(14346560-14346673)
chr4 (12-125)||(29474200-29474313)
chr4 (12-154)||(15729853-15729996)
chr4 (12-125)||(51646223-51646336)
chr4 (12-154)||(43156875-43157019)
chr4 (12-154)||(38434698-38434841)
chr4 (6-127)||(3169553-3169674)
chr4 (6-154)||(46775723-46775871)
chr4 (8-154)||(12519755-12519902)
chr4 (6-149)||(30416459-30416603)
chr4 (32-125)||(40859803-40859896)
chr4 (6-125)||(6789742-6789861)
chr4 (13-119)||(1125076-1125182)
chr4 (13-137)||(16991988-16992113)
chr4 (12-125)||(26576375-26576487)
chr4 (12-151)||(29589233-29589373)
chr4 (37-154)||(44375161-44375279)
chr4 (8-125)||(7242637-7242754)
chr4 (8-152)||(28990399-28990544)
chr4 (9-125)||(46386643-46386759)
chr4 (8-154)||(2945236-2945383)
chr4 (8-154)||(4959442-4959588)
chr4 (8-125)||(29576989-29577107)
chr4 (14-127)||(1645429-1645542)
chr4 (6-125)||(38170026-38170144)
chr4 (12-154)||(6408542-6408686)
chr4 (13-154)||(4622582-4622724)
chr4 (13-122)||(9549571-9549680)
chr4 (6-64)||(33020793-33020851)
chr4 (12-154)||(1657438-1657581)
chr4 (36-154)||(9781704-9781821)
chr4 (6-63)||(5388706-5388763)
chr4 (8-154)||(44021449-44021586)
chr4 (19-65)||(10665748-10665794)
chr4 (19-65)||(10879893-10879939)
chr4 (6-60)||(38545951-38546005)
chr4 (12-64)||(29257415-29257467)
chr4 (6-117)||(35658397-35658507)
chr4 (8-55)||(11817255-11817302)
chr4 (19-65)||(17219942-17219988)
chr4 (19-65)||(22066967-22067013)
chr4 (6-80)||(23926215-23926289)
chr4 (97-154)||(30416578-30416636)
chr4 (1-75)||(31311647-31311721)
chr4 (8-76)||(9526213-9526281)
[»] chr1 (53 HSPs)
chr1 (6-154)||(4564616-4564764)
chr1 (1-154)||(22344773-22344927)
chr1 (1-152)||(21326574-21326726)
chr1 (6-154)||(44562615-44562764)
chr1 (16-154)||(23320539-23320678)
chr1 (1-154)||(5832333-5832487)
chr1 (1-154)||(15698299-15698451)
chr1 (1-154)||(12967593-12967747)
chr1 (1-154)||(23257187-23257341)
chr1 (1-154)||(15276307-15276465)
chr1 (1-154)||(38646683-38646837)
chr1 (1-122)||(14717131-14717252)
chr1 (6-122)||(45659146-45659262)
chr1 (1-154)||(630645-630799)
chr1 (1-122)||(6212775-6212896)
chr1 (1-154)||(28213147-28213301)
chr1 (1-154)||(36621451-36621605)
chr1 (1-154)||(38644658-38644812)
chr1 (12-154)||(11121075-11121218)
chr1 (12-154)||(27469580-27469723)
chr1 (12-154)||(52839629-52839772)
chr1 (12-113)||(44513874-44513975)
chr1 (6-154)||(49651943-49652083)
chr1 (13-153)||(26199680-26199821)
chr1 (8-154)||(8893392-8893539)
chr1 (9-154)||(32539058-32539205)
chr1 (12-154)||(33177470-33177612)
chr1 (12-154)||(33703382-33703525)
chr1 (84-154)||(1768065-1768135)
chr1 (8-133)||(10264829-10264955)
chr1 (6-133)||(48654907-48655035)
chr1 (12-154)||(12147920-12148063)
chr1 (12-121)||(37684962-37685071)
chr1 (12-121)||(37700446-37700555)
chr1 (8-135)||(47392256-47392382)
chr1 (6-154)||(34566787-34566934)
chr1 (6-154)||(2350721-2350870)
chr1 (11-125)||(22031962-22032076)
chr1 (11-154)||(10877445-10877589)
chr1 (8-153)||(13969508-13969657)
chr1 (8-154)||(29067148-29067294)
chr1 (12-122)||(46589279-46589390)
chr1 (1-122)||(900226-900346)
chr1 (8-73)||(34659509-34659574)
chr1 (66-122)||(40992440-40992496)
chr1 (92-154)||(52752122-52752185)
chr1 (7-61)||(37662403-37662457)
chr1 (6-125)||(13691629-13691743)
chr1 (84-154)||(40488341-40488412)
chr1 (8-73)||(8224355-8224420)
chr1 (96-154)||(16161795-16161853)
chr1 (6-64)||(27356619-27356677)
chr1 (9-42)||(29938449-29938482)
[»] scaffold0316 (1 HSPs)
scaffold0316 (1-154)||(12064-12218)
[»] scaffold0722 (1 HSPs)
scaffold0722 (1-154)||(5387-5541)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-154)||(244735-244889)
[»] scaffold0665 (1 HSPs)
scaffold0665 (1-154)||(988-1142)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-154)||(36628-36777)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-154)||(9519-9672)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-140)||(11127-11267)
[»] scaffold0157 (1 HSPs)
scaffold0157 (8-154)||(1009-1156)
[»] scaffold0150 (1 HSPs)
scaffold0150 (13-154)||(10184-10326)
[»] scaffold0627 (1 HSPs)
scaffold0627 (6-154)||(6653-6800)
[»] scaffold0340 (1 HSPs)
scaffold0340 (12-119)||(11648-11757)
[»] scaffold0018 (2 HSPs)
scaffold0018 (84-154)||(137002-137073)
scaffold0018 (12-63)||(136946-136997)
[»] scaffold0112 (1 HSPs)
scaffold0112 (6-64)||(25378-25436)
[»] scaffold1294 (1 HSPs)
scaffold1294 (8-117)||(917-1021)


Alignment Details
Target: chr6 (Bit Score: 138; Significance: 5e-72; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 12576342 - 12576495
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12576342 cgtggatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaaggaaaacaaac 12576441  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  12576442 aacgtcgcacaaagacgacgaacaaccaacgtcacacaaagacgacggaatcac 12576495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 11426194 - 11426041
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11426194 cgtggatgacgccaaagtcattgattgaatctgcactggatcgaagctgatctgacaatctgaagagatcaaatacctgagagaaacaagaaaaacaaac 11426095  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||||||||||||||||||| || |||||||| |||||||||||    
T  11426094 aacgtcgcacaaagacgacgaacaaccaacatcgcacgaagatgacgaaatcac 11426041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 23843285 - 23843439
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||    
T  23843285 cgtggatgacgccaaagtcattgattgaatctgcactggatcgaagctgatctgacaatctgaaccgatcaaatacctaagagaaacaagaaagacaaac 23843384  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  23843385 aacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcac 23843439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 13233969 - 13234123
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  13233969 cgtggatgacgccaaaatcattgattggatctgcactagatcgaaactgatctgacaatttgaaccgatcaaatacctgagagaaacaagaaaaacaaac 13234068  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  13234069 aacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcac 13234123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 19760041 - 19759887
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||| ||||||    
T  19760041 cgtggatgacgccaaagtcattgattggatctgcactggatcgaaactgatctgacaatctgaaccgatcaaatacatgagagaaacaagaaatacaaac 19759942  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||||||| |||| |||||||||| | |||||| |||||||||||    
T  19759941 aacgtcgcacaaagacgatgaacaaaccaacgtcgctcgaagatgacgaaatcac 19759887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 8633062 - 8633206
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||   |||||    
T  8633062 atgacgccaaagtaattgattggatctgcgttggatcgaagctgatctgacaatctgaagcgatc-aatacctgagagaaacaagaaaaaca---aacgt 8633157  T
Q  106 cgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||    
T  8633158 cgcacaaagacgacgaacaaccaacgtcgcacgaaaacgacgaaatcac 8633206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 20845261 - 20845107
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  20845261 cgtggatgacgccgaagtcattgattggatctgcactggatcgaagttgatctgacaatctgaaccgatcaaatatctgagagaaacaagaaaaacaaac 20845162  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    | ||||||||||||||||||||| |||||| ||| |||||||| ||| |||||||    
T  20845161 agcgtcgcacaaagacgacgaacaaaccaatgtcgcacgaagatgacaaaatcac 20845107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 16913578 - 16913427
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||| |||||||||||||||||||||| || ||| ||||||||||||||||||  |||||||||| ||||||||||| |||||||||||    
T  16913578 cgtggatgacgccaa-gtcattgattggatctgcactgtattgaaactgatctgacaatctgaacagatcaaatacatgagagaaaca-gaaaaacaaac 16913481  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||| ||||| |||||||||||||| ||||||||||||||||||||    
T  16913480 aacgtcgcacaaggacgatgaacaaccaacgtcgcacgaagacgacgaaatcac 16913427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 7049486 - 7049344
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaa 112  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  7049486 caaagtcattgattgcatctgcactggatcgaagttgatctgacaatctgaaccgatcaaatacctgagagaaacaagaaaaacaaacaacgtctcacaa 7049387  T
Q  113 agacgacga-acaaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||| ||   |||||||||| |||||||| ||| |||||||    
T  7049386 agacgatgacgaaaccaacgtcgcacgaagatgacaaaatcac 7049344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 548727 - 548881
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||| ||||    
T  548727 cgtggatgacgccaaagtaattgattggatctgcactagatcgaagctgatatgacaatctgaaccgatcaaatacctgatagaaacaagaaaaagaaac 548826  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||| ||  |||||||||||| ||||||| |  ||||||||||| ||||||||    
T  548827 aacgtcacatgaagacgacgaacaaaccaacattgcacgaagacgatgaaatcac 548881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 32457898 - 32457745
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||| || || |||||||||||||||| ||||||| || |||||||||||||| ||||||||||||||||||||||||| |||| ||||    
T  32457898 cgtggatgacgccaacgtaatcgattggatctgcactgaatcgaagttggtctgacaatctgaaccgatcaaatacctgagagaaacaag-aaaataaac 32457800  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    || |||||||||||||||||||| || ||||||| ||||||||||||||||||||    
T  32457799 aatgtcgcacaaagacgacgaacaaatcaacgtcgcacgaagacgacgaaatcac 32457745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 31748205 - 31748056
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    |||||||  |||||| |||||| ||||||||| |||||||||||||||||||||||| |  |||||||||| ||||||||||||||||||||||||||||    
T  31748205 atgacgctgaagtcaatgattgaatctgcacttgatcgaagctgatctgacaatctgtactgatcaaatacatgagagaaacaagaaaaacaaacaacgt 31748106  T
Q  106 cgcacaaagacgacgaa-caaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||| ||  |||||| ||| |||||||||| |||||||||    
T  31748105 cgcacaaagacgacaaagaaaccaatgtcgcacgaagacgtcgaaatcac 31748056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 10744824 - 10744682
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||| ||| ||| ||||| ||||||||||||||||||||||||||| ||| ||||||||| |  ||| |||||||  ||||||||||||||||    
T  10744824 ccaaagtcattaatttgat-tgcaccggatcgaagctgatctgacaatctgaaccgaacaaatacctaaacgaaccaagaaaggcaaacaacgtcgcaca 10744726  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||| || ||| ||| ||| ||||||||||||||||    
T  10744725 aagacgacgaacaaaacaaggtcgcactaagacgacgaaatcac 10744682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 32804537 - 32804394
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    |||||||||||||||||||||||||| |||||||| |||||| |||||||||| | | ||||||| |||  ||||||||||| |||||||||| |  |||    
T  32804537 ccaaagtcattgattggatctgcacttgatcgaagttgatctcacaatctgaatcaaacaaatacatgaacgaaacaagaaagacaaacaacgccataca 32804438  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||| |||| ||||||| || ||| ||||||| ||||||||    
T  32804437 aagacgaggaacaaaccaacatctcactaagacgatgaaatcac 32804394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 31804462 - 31804352
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||| ||| |||||||||| ||||||| ||||||||||||||||||  || ||||||| |||| ||||||||||| |||||||| |||||||     
T  31804462 ccaaagtcattcatttgatctgcactagatcgaatctgatctgacaatctgaattgagcaaatacttgagcgaaacaagaaagacaaacaatgtcgcact 31804363  T
Q  112 aagacgacgaa 122  Q
    |||||||||||    
T  31804362 aagacgacgaa 31804352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 4663686 - 4663835
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||| ||||||||||||||| ||| |||||||||||| | ||||| |||||||| ||| | | |||||||||||  ||||||| ||||| |||||| ||    
T  4663686 atgactccaaagtcattgatttgatatgcactggatcgtaactgatatgacaatcagaaccaaacaaatacctgaacgaaacaataaaaaaaaacaaagt 4663785  T
Q  106 cgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||| ||||||| ||  |||||| ||| ||||||||||||||||    
T  4663786 cgcacaaagatgacgaacaaaataacgtcgcactaagacgacgaaatcac 4663835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 20496435 - 20496332
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||| |||||||||||   |||||| ||| |||||||| |||| |||    
T  20496435 ccaaagtcattgattggatttgcactggatctaagctgatctgacaatctgaaccgaacaaatacctgaacaaaacaaaaaagacaaacaaagtcgtaca 20496336  T
Q  112 aaga 115  Q
    ||||    
T  20496335 aaga 20496332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 122
Target Start/End: Original strand, 15127998 - 15128111
Alignment:
Q  9 acgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgc 108  Q
    |||||||||||||||||| |||||||| |||||||||| |||  ||||||||||||  || ||||||| |||  |||| |||||| ||||||||| ||||    
T  15127998 acgccaaagtcattgatttgatctgcagtggatcgaagttgaattgacaatctgaacagaacaaatacttgaatgaaagaagaaagacaaacaacatcgc 15128097  T
Q  109 acaaagacgacgaa 122  Q
    ||||||||||||||    
T  15128098 acaaagacgacgaa 15128111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 8644491 - 8644375
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    |||||||||||||||||||| ||||||| |||||| ||| ||||| ||||||||||| | | |||||||||||   |||||||||| |||| ||||| ||    
T  8644491 gacgccaaagtcattgattgaatctgcaatggatctaagttgatcagacaatctgaaccaaacaaatacctgaacaaaacaagaaagacaagcaacgccg 8644392  T
Q  108 cacaaagacgacgaaca 124  Q
    |||||||||||| ||||    
T  8644391 cacaaagacgaccaaca 8644375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 5544949 - 5544836
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    |||||||| |||||||||| ||||| |||||||| ||||| ||||| |||||| | | |||| ||||||  |||| |||||| |||||||||||| ||||    
T  5544949 ccaaagtcgttgattggatatgcacaggatcgaatctgatatgacattctgaaccaaacaaacacctgaacgaaataagaaagacaaacaacgtcacaca 5544850  T
Q  112 aagacgacgaacaa 125  Q
    ||||||||||||||    
T  5544849 aagacgacgaacaa 5544836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 119
Target Start/End: Complemental strand, 1944342 - 1944231
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    ||||||||| | |||||||||||| ||| ||||||||||||||| ||||||| |||| | | ||| |||||||  || |||||||| |||||||||| ||    
T  1944342 gacgccaaaattattgattggatccgcattggatcgaagctgatatgacaatttgaaccaaacaattacctgaacgacacaagaaagacaaacaacgccg 1944243  T
Q  108 cacaaagacgac 119  Q
    ||||||||||||    
T  1944242 cacaaagacgac 1944231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 33541397 - 33541544
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaag---aaaaacaaacaa 102  Q
    ||||| |||||||||||| |||||||||||||||| |||||||||||| |||||||||| | | |||| |||||     ||||||   ||| ||||||||    
T  33541397 atgacaccaaagtcattggttggatctgcactggaacgaagctgatctaacaatctgaatctaacaaacacctg-----aacaagggaaaagacaaacaa 33541491  T
Q  103 cgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    | ||||||||||||||| ||| || || |||||||| |||||||| |||||||    
T  33541492 catcgcacaaagacgacaaacaaaacagcgtcacactaagacgacaaaatcac 33541544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 34020848 - 34020708
Alignment:
Q  9 acgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgc 108  Q
    ||||||||||||||| |||||||| |||| |||||| ||||||||||||||||||   || |||| ||||  ||  || | ||||||||||||||||||     
T  34020848 acgccaaagtcattggttggatctacactagatcgaggctgatctgacaatctgatctgaacaaacacct--gaacaagaggaaaaacaaacaacgtcgt 34020751  T
Q  109 acaaagacgacgaac-aaccaacgtcacacgaagacgacgaaa 150  Q
    ||||||||||| ||| || || |||| ||| ||||||||||||    
T  34020750 acaaagacgacaaacaaaacagcgtcgcactaagacgacgaaa 34020708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 23 - 125
Target Start/End: Complemental strand, 904499 - 904397
Alignment:
Q  23 gattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaagacgacgaa 122  Q
    |||||||| |||| ||||||||||||||||||||| |||||| ||| || |||  |||   |||||||||| |||||||||||| |||||||||| ||||    
T  904499 gattggatatgcattggatcgaagctgatctgacagtctgaaccgaacatatagttgaacaaaacaagaaagacaaacaacgtcacacaaagacggcgaa 904400  T
Q  123 caa 125  Q
    |||    
T  904399 caa 904397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 5417141 - 5417213
Alignment:
Q  83 gaaacaagaaaaacaaacaacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||| | |||||||| |||||||||||||||||| |||||||||| ||| ||||||||||||||||    
T  5417141 gaaacaagaaagagaaacaacgccgcacaaagacgacgaacaaaccaacgtcgcacaaagacgacgaaatcac 5417213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 22530520 - 22530379
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaa 112  Q
    |||||| ||| ||||||||||||||||||||||| ||||||||| |||  || ||| |||||| || | | ||| |||||| ||||||||| ||||||||    
T  22530520 caaagtgattcattggatctgcactggatcgaagttgatctgaccatcaaaatcgaacaaata-cttaaacaaaaaagaaagacaaacaacatcgcacaa 22530422  T
Q  113 agacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||| || |||| ||  |||||| ||| |||||| |||||||||    
T  22530421 agatgatgaacaaaataacgtctcactaagacgtcgaaatcac 22530379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 47 - 154
Target Start/End: Complemental strand, 33194812 - 33194704
Alignment:
Q  47 ctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacga 145  Q
    |||||||||||||||||| ||| |||||||| ||  |||| |||||| |||||||||  ||| |||  ||||||||| ||||||| |||||| || ||||    
T  33194812 ctgatctgacaatctgaaccgaacaaatacccgaaggaaataagaaagacaaacaacaacgctcaagtacgacgaacaaaccaacatcacactaacacga 33194713  T
Q  146 cgaaatcac 154  Q
    |||||||||    
T  33194712 cgaaatcac 33194704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 892529 - 892482
Alignment:
Q  9 acgccaaagtcattgattggatctgcactggatcgaagctgatctgac 56  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  892529 acgccaaagtcattgattggatctgcactgggtcgaagcagatctgac 892482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 154
Target Start/End: Original strand, 15128114 - 15128168
Alignment:
Q  101 aacgtcgcacaaagacgacgaacaa-ccaacgtcacacgaagacgacgaaatcac 154  Q
    |||| |||||||||||||||||||| |||||||| ||| ||||||||||||||||    
T  15128114 aacgccgcacaaagacgacgaacaaaccaacgtcgcactaagacgacgaaatcac 15128168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 12652069 - 12652182
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    ||||||||||||||| |||    |||||||  ||| ||| |||||||||||||  || ||| ||||||| |||  ||||||||||| | ||||||| |||    
T  12652069 gacgccaaagtcatttatt----ctgcactaaatctaagttgatctgacaatcctaaccgaacaaatacatgaacgaaacaagaaagaaaaacaacatcg 12652164  T
Q  108 cacaaagacgacgaacaa 125  Q
    || ||| |||||||||||    
T  12652165 cagaaatacgacgaacaa 12652182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 546043 - 545985
Alignment:
Q  96 caaacaacgtcgcacaaagacgacgaacaac-caacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||| ||||||||||||||| ||||||| ||| ||||||| ||||||||    
T  546043 caaacaacgtcgcac-aagacgacgaacaacgcaacgtcgcactaagacgatgaaatcac 545985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 1523421 - 1523363
Alignment:
Q  96 caaacaacgtcgcacaaagacgacgaacaac-caacgtcacacgaagacgacgaaatcac 154  Q
    ||||||| ||||||||| ||||||||||||| ||||||| ||| ||||||||||||||||    
T  1523421 caaacaatgtcgcacaa-gacgacgaacaacacaacgtcgcactaagacgacgaaatcac 1523363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 8694145 - 8694196
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaat 59  Q
    ||||||||||||||||||||||||||| || |||| ||| || |||||||||    
T  8694145 gacgccaaagtcattgattggatctgctctagatcaaagttggtctgacaat 8694196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 5417096 - 5417132
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagct 48  Q
    |||||||| |||||||||||||||||| |||||||||    
T  5417096 ccaaagtctttgattggatctgcactgcatcgaagct 5417132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 30776690 - 30776627
Alignment:
Q  91 aaaaacaaacaacgtcgcacaaagacgacgaacaac-caacgtcacacgaagacgacgaaatcac 154  Q
    |||| ||||||||| ||||||| || |||||||||| ||||||| ||| ||||||||||||||||    
T  30776690 aaaatcaaacaacgccgcacaa-gatgacgaacaacacaacgtcgcactaagacgacgaaatcac 30776627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 138; Significance: 5e-72; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 3088525 - 3088678
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  3088525 cgtggatgacgccaaagtcattgattggatctgcactggatcgaagatgatctgacaatctgaagcgattaaatacctgagagaaacaagaaaaacaaac 3088624  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3088625 aacgtcgcacaaagacgacgaacaaccaacgtcgcacgaagacgacgaaatcac 3088678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 28995170 - 28995323
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  28995170 cgtggatgacgccaaagtcattgattggatctgcactggatcgaagctgatatgacaatctgaagcgatcaaatacctaagagaaacaagaaaaacaaac 28995269  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  28995270 aacgtcgcacaaagacgacgaacaaccaacgtcgcacgaagacgacaaaatcac 28995323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 41882271 - 41882424
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41882271 cgtggatgacgccaaagtcattgattaaatctgcactggattgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 41882370  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41882371 aacgtcgcacaaagacgacgaacaaccaacgtcgcacgaagacgacgaaatcac 41882424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 22286612 - 22286765
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  22286612 cgtggatgacgtcaaagtcattgattggatctgcactggatcgaagctgatctgacaatatgaagcgatcaaatgcctgagagaaacaagaaaaacaaac 22286711  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  22286712 aacgtcgcacaaagacgacgaacaaccaacgtcgcgcgaagacgacgaaatcac 22286765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 43029936 - 43029782
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  43029936 cgtggatgactccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaactgatcaaatacctgagagaaacaagaaaaacaaac 43029837  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  43029836 aacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcac 43029782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 1165257 - 1165411
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||    
T  1165257 cgtggatgacgccaaagtcattgattggatctgcactggatcgaagctgatctaacaatctgaactgatcaaatacctgagagaaacaagaaaaacaaac 1165356  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  1165357 aacgttgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcac 1165411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 50520036 - 50519904
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50520036 cgtggatgacgccaaaatcattgattgaatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 50519937  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtc 133  Q
    |||||||||||||||||||||||||||||||||    
T  50519936 aacgtcgcacaaagacgacgaacaaccaacgtc 50519904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 33977786 - 33977939
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||| ||||||||||||||||||||||||||| |||||| ||||||| |||| |||||||||||||||||||||||||||||||| ||||||||    
T  33977786 cgtggatgacaccaaagtcattgattggatctgcactgaatcgaaactgatctaacaaactgaagcgatcaaatacctgagagaaacaagacaaacaaac 33977885  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  33977886 aacgtcgcacaaagacgacgaacaaccaacgtcgcacgaagacgatgaaatcac 33977939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 29182471 - 29182623
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||| |||| |||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||| |||||||||||||||||||||||    
T  29182471 cgtggatgacgctaaagccattgattggatctgcactggatcaaagctgat--gacaatctgaaccgatcaaatacttgagagaaacaagaaaaacaaac 29182568  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29182569 aacgtcgcacaaagacgacgaacaaaccaacgtcacacgaagacgacgaaatcac 29182623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 45664474 - 45664320
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  45664474 cgtggatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaaccgatcaaatacctgagagaaacaagaaagacaaac 45664375  T
Q  101 aacgtcgcacaaagacgacg-aacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||| | |||| || ||| |||||  ||||||||| ||||||||||    
T  45664374 aacgtcgcacaaatatgacgaaaaaacgaacgtagcacgaagacaacgaaatcac 45664320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 47914454 - 47914608
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaa-caagaaaaacaaa 99  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||   ||||||||||||||||||| |||||||||||||    
T  47914454 cgtggatgacgccaaagtcattgattggatctgcactgaatcgaagctgatataacaatctgaactaatcaaatacctgagagaaaacaagaaaaacaaa 47914553  T
Q  100 caacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||    
T  47914554 caacgtcggacaaagacgacaaacaaccaacgtcgcacgaagacgacgaaatcac 47914608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 10 - 154
Target Start/End: Complemental strand, 54240330 - 54240185
Alignment:
Q  10 cgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgca 109  Q
    ||||||||||||||||||||| ||||||| |||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||| |||||    
T  54240330 cgccaaagtcattgattggatttgcactgaatcgaagctgatctcacaatctgaaccgatcaaatacctgatagaaacaagaaaaacaaacaacatcgca 54240231  T
Q  110 caaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||| ||||| |||||||||| ||||||||||||||||||||    
T  54240230 caaagacgtcgaacaaaccaacgtcgcacgaagacgacgaaatcac 54240185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 20200926 - 20201072
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||     
T  20200926 gacgccgaagtcattgattggatctgcacttgattgaagctgatctgacaatctgaaccgatcaaataactgagagaaacaagaaaaacaaacaacctca 20201025  T
Q  108 cacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatca 153  Q
    |||||||| ||| ||| |||||| ||| |||||| ||||||||||||    
T  20201026 cacaaagatgacaaacaaaccaatgtcgcacgaaaacgacgaaatca 20201072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 20203108 - 20203254
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||     
T  20203108 gacgccgaagtcattgattggatctgcacttgattgaagctgatctgacaatctgaaccgatcaaataactgagagaaacaagaaaaacaaacaacctca 20203207  T
Q  108 cacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatca 153  Q
    |||||||| ||| ||| |||||| ||| |||||| ||||||||||||    
T  20203208 cacaaagatgacaaacaaaccaatgtcgcacgaaaacgacgaaatca 20203254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 20251898 - 20251756
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaa 112  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||| ||||| ||||| |||||||||||||||  ||||||||| | |||||| |||||    
T  20251898 caaagtcattgattggatttgcactggatcgaagctaatctgacaacctgaaccgatcgaatacctgagagaaaatagaaaaacatataacgtcacacaa 20251799  T
Q  113 agacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||| |||||||||| |||||||||||| |||||||    
T  20251798 agacgacgaacaaaccaacgtcgcacgaagacgacaaaatcac 20251756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 4019844 - 4019694
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaa---aacaaacaacg 104  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||   |||||| |||   || ||||||||    
T  4019844 gacgccaaagtcattgattggatctgcactggatctaagctgatctgacaatctgaaccgaacaaatacctgaacaaaacaataaagacaaaaaacaacg 4019745  T
Q  105 tcgcacaaagacgacgaacaac-caacgtcacacgaagacgacgaaatcac 154  Q
     ||||||||||||||||||||| ||||||| ||| ||||||||||||||||    
T  4019744 ccgcacaaagacgacgaacaacacaacgtcgcactaagacgacgaaatcac 4019694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 43839378 - 43839533
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||| ||| ||||||||||||||||||| ||||||| |||||||||||||| ||  ||| ||||||||||||||||||||||||||||||    
T  43839378 cgtggatgacgccagagttattgattggatctgcactgaatcgaagttgatctgacaatctaaactgattaaatacctgagagaaacaagaaaaacaaac 43839477  T
Q  101 aacgtcgcac-aaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    || ||||||| ||| ||||||||| ||||||| || |||||||| |||||||||||    
T  43839478 aatgtcgcacaaaatacgacgaacaaaccaacatcgcacgaagatgacgaaatcac 43839533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 49 - 154
Target Start/End: Original strand, 14741234 - 14741340
Alignment:
Q  49 gatctgacaatctgaagcgatcaaatacctgagagaaa-caagaaaaacaaacaacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacg 147  Q
    ||||||||||||||||   ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14741234 gatctgacaatctgaactaatcaaatacctgagagaaaacaagaaaaacaaacaacgtcgcacaaagacgacgaacaaccaacgtcgcacgaagacgacg 14741333  T
Q  148 aaatcac 154  Q
    |||||||    
T  14741334 aaatcac 14741340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 6 - 153
Target Start/End: Complemental strand, 40797281 - 40797133
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||| |||||||| ||   |||||||||| |||||||||||    
T  40797281 atgactccaaagtcattgatttgatctgcactagatcgaagctgatctgacaatctgaatcgaacaaatacccgaacaaaacaagaaagacaaacaacgt 40797182  T
Q  106 cgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatca 153  Q
    |||||||||||||||||| || ||| ||| ||| |||||| ||||||||    
T  40797181 cgcacaaagacgacgaacaaaacaatgtctcactaagacggcgaaatca 40797133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 913182 - 913301
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||  |   |||||||||| |||||||||||    
T  913182 atgactccaaagtcattgatttgatctgcactggatcgaagctgatctgacaatctgaaccgaacaaatacccaaacaaaacaagaaagacaaacaacgt 913281  T
Q  106 cgcacaaagacgacgaacaa 125  Q
    ||||||||||||||||||||    
T  913282 cgcacaaagacgacgaacaa 913301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 22844294 - 22844151
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| |||||||||| |||||||| ||||||||||||||||| ||| |||||||||||   |||||||||| |||||||||||||||||    
T  22844294 ccaaagtcattgatttgatctgcacttgatcgaagttgatctgacaatctgaaccgaacaaatacctgaacaaaacaagaaagacaaacaacgtcgcaca 22844195  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||| || ||| ||| ||| ||||||| ||||||||    
T  22844194 aagacgacgaacaaaacaatgtcgcactaagacgatgaaatcac 22844151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 35501632 - 35501774
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaa 112  Q
    ||||||||||||||| || |||| |||||||||||| ||||||||| ||||| |||||||||||||||||||||  ||||||||| | ||||||||||||    
T  35501632 caaagtcattgattgaatttgcattggatcgaagctaatctgacaacctgaaccgatcaaatacctgagagaaaatagaaaaacatataacgtcgcacaa 35501731  T
Q  113 agacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||| |||| ||| ||||||||| ||||||||| |||||||    
T  35501732 agacgatgaacaaactaacgtcacatgaagacgacaaaatcac 35501774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 7656381 - 7656527
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||| |||||||||||||||||||| |     || |||||||||| ||||||| || |||||||||||||||||||||||||||| ||||||    
T  7656381 cgtggatgacgctaaagtcattgattggatctgta-----tcaaagctgatctaacaatctaaaccgatcaaatacctgagagaaacaagaaagacaaac 7656475  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaat 151  Q
    ||  ||||||||||||||||||| |||||||||| |||||||||| ||||||    
T  7656476 aatatcgcacaaagacgacgaacaaaccaacgtcgcacgaagacggcgaaat 7656527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 11846801 - 11846684
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||| ||||||||||||| ||||  ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| | |||     
T  11846801 cgtggatgacgccaaaatcattgattggatatgcatcggatcaaagctgatctgacaatctgaaccgatcaaatacctgagagaaacaagaaaga-aaaa 11846703  T
Q  101 aacgtcgcacaaagacgac 119  Q
    |||||||||||||||||||    
T  11846702 aacgtcgcacaaagacgac 11846684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 32237869 - 32238011
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaa 112  Q
    ||||||||||||||| || ||||||||||| ||||||||||||||||||||| ||| |||||||||||  ||||| ||||| |||||||||| |||||||    
T  32237869 caaagtcattgattgaatgtgcactggatctaagctgatctgacaatctgaaccgaacaaatacctgaacgaaactagaaagacaaacaacgccgcacaa 32237968  T
Q  113 agacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||| ||||||| || ||| |||| ||| |||||||    
T  32237969 agacgacgaacaaaccaacatcgcacaaagatgacaaaatcac 32238011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 21803784 - 21803629
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaaga--aaaacaa 98  Q
    |||| |||||| |||||||||||||||||| ||||| |||||||||||||||| ||||| |||| | ||||||||||| |||||||||| |  |||| ||    
T  21803784 cgtggatgacgtcaaagtcattgattggatttgcacgggatcgaagctgatctaacaat-tgaaccaatcaaatacctaagagaaacaaaaacaaaaaaa 21803686  T
Q  99 acaacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    | ||||||||||||||||||||||| |||||| ||| ||||||||| ||||||||||    
T  21803685 aaaacgtcgcacaaagacgacgaacaaaccaatgtcgcacgaagactacgaaatcac 21803629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 53427044 - 53426897
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    ||||||||||||||||||||||||||||||  ||| ||||| |||||||||||| || ||| |||||||||||   |||||||||| |||||||| | |     
T  53427044 gacgccaaagtcattgattggatctgcactatatctaagcttatctgacaatctaaaccgaacaaatacctgaacaaaacaagaaagacaaacaaaggca 53426945  T
Q  108 cacaaagacgacgaacaac-caacgtcacacgaagacgacgaaatcac 154  Q
    |||||||| ||||||||||  |||||| ||| ||||||||||||||||    
T  53426944 cacaaagatgacgaacaacaaaacgtcgcactaagacgacgaaatcac 53426897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 29776562 - 29776705
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||| ||||||||||| ||||||| ||| |||||||||||||||||  || ||| |||||||||||  ||||||||||| |||||||||| || |||    
T  29776562 ccaaagttattgattggatttgcactgaatctaagctgatctgacaatcaaaaccgaacaaatacctgaacgaaacaagaaagacaaacaacgccgtaca 29776661  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||| ||| |||||| ||| |||| ||| |||||||    
T  29776662 aagacgacgaacaaacaaacgtcgcacaaagatgacaaaatcac 29776705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 33076538 - 33076419
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaaca-agaaaaacaaa 99  Q
    |||| |||||| |||||||||||||||||||||||||||||| ||||| |||| |||||||||| ||||||||||||||| ||||||| |  ||||||||    
T  33076538 cgtggatgacgtcaaagtcattgattggatctgcactggatcaaagctaatctaacaatctgaaccgatcaaatacctgaaagaaacacaagaaaacaaa 33076439  T
Q  100 caacgtcgcacaaagacgac 119  Q
    ||| ||||||| || |||||    
T  33076438 caaggtcgcacgaaaacgac 33076419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 25939348 - 25939494
Alignment:
Q  9 acgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgc 108  Q
    |||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||   | |||||| ||||  ||||||| ||| |||||||||| |||    
T  25939348 acgccaaagtcattgattggatctgcactgaatctaagctgatctaacaatctgaacataacaaatatctgaacgaaacaacaaagacaaacaacgccgc 25939447  T
Q  109 acaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||| ||| || ||||||| |||  |||| ||||||||||    
T  25939448 acaaagacgactaacaaaacaacgtcgcactgagacaacgaaatcac 25939494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 12 - 148
Target Start/End: Complemental strand, 42106380 - 42106245
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||  |   |||||||||| ||||| |||||||  ||    
T  42106380 ccaaagtcattgatttgatctgcactggatcgaagctgatctgacaatctgaaccgaacaaatacccaaacaaaacaagaaagacaaataacgtcg--ca 42106283  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacga 148  Q
    |||| ||||||| || ||||||| ||| ||||||||||    
T  42106282 aagatgacgaacaaaacaacgtcgcacaaagacgacga 42106245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 21586145 - 21585998
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    |||| |||||||||||||||||| ||||||| |||||||||| |||||||||||||| ||| ||| |||||||   |||||| ||| |||||||| |||     
T  21586145 gacgtcaaagtcattgattggatttgcactgaatcgaagctggtctgacaatctgaaccgaacaagtacctgaacaaaacaaaaaagacaaacaaagtca 21586046  T
Q  108 cacaaagacgacgaa-caaccaacgtcacacgaagacgacgaaatcac 154  Q
     | ||||||||||||  || ||||||||||| |||| |||||||||||    
T  21586045 aaaaaagacgacgaataaatcaacgtcacactaagatgacgaaatcac 21585998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 154
Target Start/End: Original strand, 32089798 - 32089945
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    |||| |||| |||||||||||||||||||||||||||||||||| ||||||||| || | | ||||||| |||  ||||||||||| |||||||| | |     
T  32089798 gacgtcaaaatcattgattggatctgcactggatcgaagctgatatgacaatctaaaccaaacaaatacatgaacgaaacaagaaagacaaacaatgccc 32089897  T
Q  108 cacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||| || ||  || ||| ||| ||||||||||||||||    
T  32089898 cacaaagacgacggacaaagtaatgtcgcactaagacgacgaaatcac 32089945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 22893584 - 22893730
Alignment:
Q  9 acgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgc 108  Q
    |||||||||||||||||| ||||||||||||||| || || || ||||||| |||| |   |||||| ||||  ||||||||||| |||||||||| ||     
T  22893584 acgccaaagtcattgattagatctgcactggatcaaaactcatatgacaatatgaaccatacaaatatctgaacgaaacaagaaagacaaacaacgccgt 22893683  T
Q  109 acaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||| ||||||| |||||||||| ||| |||| |||||||||||    
T  22893684 acaaagatgacgaacaaaccaacgtcgcactaagaagacgaaatcac 22893730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 16 - 154
Target Start/End: Original strand, 36540550 - 36540688
Alignment:
Q  16 agtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaaga 115  Q
    |||||||||||  ||||| |||| ||||||| ||||||||||||||||| ||  ||||||| |||  ||||||||||| ||||||||| || ||| ||||    
T  36540550 agtcattgatttaatctgtactgaatcgaagttgatctgacaatctgaaccggacaaatacttgaatgaaacaagaaagacaaacaacatcccac-aaga 36540648  T
Q  116 cgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||| | || ||||||| ||| ||||||||||||||||    
T  36540649 cgacgatcaaaacaacgtcgcactaagacgacgaaatcac 36540688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 37051842 - 37051768
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctga 80  Q
    ||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||| ||| |||| ||||||    
T  37051842 atgacgccaaagttattggttggatctgcactggatcgaaactgatctgacaatctgaatcgagcaaacacctga 37051768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 40461864 - 40462010
Alignment:
Q  9 acgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgc 108  Q
    |||| ||| ||||||||||||||| ||   |||| ||||| ||||||||||||||| | ||||||||  ||   ||||||||||| |||||||||| |||    
T  40461864 acgctaaattcattgattggatctacatatgatcaaagctaatctgacaatctgaaccaatcaaatatatgtatgaaacaagaaagacaaacaacgccgc 40461963  T
Q  109 acaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||| || |||| || ||| |||||||| |||||||    
T  40461964 acaaagacgacgaacaaatcaacatcgcactaagacgacaaaatcac 40462010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 39340445 - 39340332
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    |||| ||||||||||||||| ||| ||||| |||| ||| |||| ||||||||| || ||| ||||||| | |  ||||||||||| |||||||||| ||    
T  39340445 gacgacaaagtcattgattgaatcagcactagatctaagttgatatgacaatctaaaccgaacaaatacattaacgaaacaagaaagacaaacaacgccg 39340346  T
Q  108 cacaaagacgacga 121  Q
    ||||||||||||||    
T  39340345 cacaaagacgacga 39340332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 118
Target Start/End: Complemental strand, 34767228 - 34767122
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||| ||||| ||| |||||||||| |||||||| || ||||||||| ||||  || ||||||| |||  ||||||||||| ||||||||| || ||||    
T  34767228 ccaaaatcattaattagatctgcacttgatcgaagttgttctgacaatttgaactgaacaaatacttgaacgaaacaagaaagacaaacaacatcacaca 34767129  T
Q  112 aagacga 118  Q
    |||||||    
T  34767128 aagacga 34767122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 80
Target Start/End: Original strand, 48060963 - 48061029
Alignment:
Q  14 aaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctga 80  Q
    ||||||||||||||||| |||||| ||||||| || ||||||||||||||| ||| |||||||||||    
T  48060963 aaagtcattgattggatttgcactagatcgaaactaatctgacaatctgaaccgaacaaatacctga 48061029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 103
Target Start/End: Complemental strand, 50460431 - 50460341
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaac 103  Q
    |||||| ||||||||||| |||| ||||||||| ||||||||||||||| || ||| |||||| ||||  |||| |||||| |||||||||    
T  50460431 caaagttattgattggatttgcattggatcgaaactgatctgacaatctaaaccgaacaaataactgaacgaaataagaaagacaaacaac 50460341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 27831345 - 27831289
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaa 64  Q
    |||||||||||||| |||| |||||||||| |||| |||||||||||||||||||||    
T  27831345 gacgccaaagtcatggattagatctgcactagatcaaagctgatctgacaatctgaa 27831289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 123
Target Start/End: Complemental strand, 2598320 - 2598210
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||||||||||||||  ||| ||| |||||| | | ||| || ||| ||||||| |||  ||||||||||| | ||||||||| |||||    
T  2598320 ccaaagtcattgattggatctgcactaaatcaaagttgatctaa-actctaaaccgaacaaatacatgaacgaaacaagaaagagaaacaacgttgcaca 2598222  T
Q  112 aagacgacgaac 123  Q
    ||||||| ||||    
T  2598221 aagacgatgaac 2598210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 40365473 - 40365325
Alignment:
Q  6 atgacgccaaagtc-attgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacg 104  Q
    |||||||||||||| ||||||| |||||| | ||||| ||||||||||||||||||| ||  || ||||||||| |  ||| | | ||||||||||||||    
T  40365473 atgacgccaaagtccattgatttgatctgta-tggattgaagctgatctgacaatctaaactgaacaaatacctaaacgaatcta-aaaaacaaacaacg 40365376  T
Q  105 tcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
     || ||||||||||| ||| |||||||||| ||  |||| ||| |||||||    
T  40365375 ccgtacaaagacgacaaacaaaccaacgtcgcattaagatgacaaaatcac 40365325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 25373950 - 25374007
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaag 65  Q
    |||| |||||||||||||| ||| ||||||||||||||| ||||||||| ||||||||    
T  25373950 gacgtcaaagtcattgattagatatgcactggatcgaagttgatctgacgatctgaag 25374007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 33794019 - 33793903
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||| ||| ||| ||||||||| | |||||||| |||| |||| ||| |||||||| ||| |||||||||||   |||||| |||||| |||    
T  33794019 cgtggatgacgctaaaatcaatgattggatatacactggattgaagttgatatgataatctgaatcgaccaaatacctgaacaaaacaacaaaaac-aac 33793921  T
Q  101 aacgtcgcacaaagacga 118  Q
    |||  |||||||||||||    
T  33793920 aacaccgcacaaagacga 33793903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 117
Target Start/End: Complemental strand, 43243054 - 43242945
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    |||| ||| |||||||||| ||||||||||  ||| ||| |||| |||||||||||  |||  ||||||||||  ||||||| |||||||||||| | |     
T  43243054 gacgtcaaggtcattgatttgatctgcactatatcaaagttgatatgacaatctgagccgaataaatacctgaatgaaacaataaaaacaaacaaagccc 43242955  T
Q  108 cacaaagacg 117  Q
    ||||||||||    
T  43242954 cacaaagacg 43242945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 100
Target Start/End: Complemental strand, 26412536 - 26412442
Alignment:
Q  8 gacgccaaagtcattgattggatctg--cactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    ||||||||| ||||||||||||| ||  ||||||||||||  | ||||||||||||||| ||| ||||||| |||  ||||||||| | ||||||    
T  26412536 gacgccaaactcattgattggatatgtgcactggatcgaatttaatctgacaatctgaaccgaacaaatacttgaacgaaacaagagagacaaac 26412442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 154
Target Start/End: Original strand, 1220117 - 1220262
Alignment:
Q  7 tgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtc 106  Q
    |||||| ||| |||||||||| ||||| |||| |   |||||||| |||||| |||||  || ||||||||  |  ||||||| ||| |||||||| | |    
T  1220117 tgacgcaaaaatcattgattgaatctgtactgca---aagctgatatgacaacctgaaatgaacaaatacccaaacgaaacaaaaaagacaaacaaagcc 1220213  T
Q  107 gcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||| || |||| || ||| |||||||| |||||||    
T  1220214 gcacaaagacgacgaacaaaacaacatcgcactaagacgacaaaatcac 1220262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 27706304 - 27706361
Alignment:
Q  97 aaacaacgtcgcacaaagacgacgaacaac-caacgtcacacgaagacgacgaaatcac 154  Q
    |||||||| ||||||| ||||||||||||| ||||||||||| ||||||||||||||||    
T  27706304 aaacaacgccgcacaa-gacgacgaacaacacaacgtcacactaagacgacgaaatcac 27706361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 35670654 - 35670594
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaa 73  Q
    |||||||||||||||||| |||| |||||||||| | |||| |||||||||| ||| ||||    
T  35670654 caaagtcattgattggatatgcattggatcgaagtttatctaacaatctgaatcgaacaaa 35670594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 7546625 - 7546567
Alignment:
Q  96 caaacaacgtcgcacaaagacgacgaacaac-caacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||| ||||||||||||||||    
T  7546625 caaacaacgccgcacaa-gacgacgaacaacacaacgtcgcactaagacgacgaaatcac 7546567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 42
Target Start/End: Complemental strand, 28876732 - 28876704
Alignment:
Q  14 aaagtcattgattggatctgcactggatc 42  Q
    |||||||||||||||||||||||||||||    
T  28876732 aaagtcattgattggatctgcactggatc 28876704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 33069900 - 33069860
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagct 48  Q
    |||| |||||| ||||||||||||||||||| |||||||||    
T  33069900 gacgtcaaagttattgattggatctgcactgcatcgaagct 33069860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 48212585 - 48212557
Alignment:
Q  9 acgccaaagtcattgattggatctgcact 37  Q
    |||||||||||||||||||||||||||||    
T  48212585 acgccaaagtcattgattggatctgcact 48212557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 51923743 - 51923680
Alignment:
Q  91 aaaaacaaacaacgtcgcacaaagacgacgaacaac-caacgtcacacgaagacgacgaaatcac 154  Q
    |||| |||| |||| ||||||| || |||||||||| ||||||||||| ||||||||||||||||    
T  51923743 aaaatcaaataacgccgcacaa-gatgacgaacaacacaacgtcacactaagacgacgaaatcac 51923680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 5e-72; HSPs: 65)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 27191198 - 27191351
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27191198 cgtggatgacgccaaagtcattgattggatctacactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 27191297  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  27191298 aacgtcgcacaaagacgacgaacaaccaacgtcgtacgaagacgacgaaatcac 27191351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 27841012 - 27841165
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27841012 cgtggatgacgccaaagtcattgattggatctacactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 27841111  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  27841112 aacgtcgcacaaagacgacgaacaaccaacgtcgtacgaagacgacgaaatcac 27841165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 36508182 - 36508029
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36508182 cgtggatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagtgatcaaatacctgagagaaacaagaaaaacaaac 36508083  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  36508082 aacgtcgcacaaagacaacgaacaaccaacgtcgcacgaagacgacgaaatcac 36508029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 43567126 - 43566973
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43567126 cgtggatgacaccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgattaaatacctgagagaaacaagaaaaacaaac 43567027  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  43567026 aacgtcgcacaaagacgacgaacaaccaacgtcgcacgaagacgacgaaatcac 43566973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 25516745 - 25516592
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25516745 cgtggatgacgccaaagtcattgattggatctgcactggattgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 25516646  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    || |||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  25516645 aatgtcgcacaaagacgacgaacaaccaacgtcgcacgaagacgaagaaatcac 25516592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 7640217 - 7640371
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  7640217 cgtggatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaaccgatcaaatacctgagagaaacaagaaagacaaac 7640316  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  7640317 aacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcac 7640371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 38822320 - 38822172
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    |||||| |||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38822320 atgacgtcaaagtcattgattggatctgcactggatcgaagcaaatctggcaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 38822221  T
Q  106 cgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  38822220 cgcacaaagacgacgaacaaccaacgtcgcacgaagacgacgaaatcac 38822172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 41177111 - 41176970
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  41177111 cgtggatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatttgaagcgatcaaatacttgagagaaacaagaaaaacaaac 41177012  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaaga 142  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  41177011 aacgtcgcacaaagacgacgaacaaccaacgtcgcacgaaga 41176970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 44167572 - 44167725
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||    
T  44167572 cgtggatgacgtcaaagtcattgattggatctgcactggattgaagctgatctgacaatttgaagcgatcaaatagctgagcgaaacaagaaaaacaaac 44167671  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44167672 aacgtcgcacaaagacgacgaacaaccaacgtcgcacgaagacgacgaaatcac 44167725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 27024000 - 27024154
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  27024000 cgtggatgactccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaattgatcaaatacctgagagaaacaagaaaaacaaac 27024099  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||    
T  27024100 aacgtcgcacaaagacgacgaacaaaccaatgtcgcacgaagacgacgaaatcac 27024154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 25771698 - 25771544
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||    
T  25771698 cgtggatgacgccaaaatcattgattggatctacactggatcgaagctgatctaacaatctgaactgatcaaatacctgagagaaacaagaaaaacaaac 25771599  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  25771598 aacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcac 25771544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 6090143 - 6089990
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6090143 cgtggatgacactaaagtcattgattggatatgcactggatcgaagctgatctgacaatctgaagcgatcaaatatctgagagaaacaagaaaaacaaac 6090044  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||| || ||||||||||| || ||||||||||||||||||||    
T  6090043 aacgtcgcacaaagaagatgaacaaccaacatcgcacgaagacgacgaaatcac 6089990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 44951659 - 44951522
Alignment:
Q  14 aaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaa 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  44951659 aaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaaccgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgtacaaa 44951560  T
Q  114 gacgacgaac-aaccaacgtcacacgaagacgacgaaa 150  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  44951559 gacgacgaacaaaccaacgtcgcacgaagacgacgaaa 44951522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 3465182 - 3465061
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3465182 cgtggatgacgccaaaatcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacttgagagaaacaagaaaaacaaac 3465083  T
Q  101 aacgtcgcacaaagacgacgaa 122  Q
    ||||||||||||||||||||||    
T  3465082 aacgtcgcacaaagacgacgaa 3465061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 26 - 154
Target Start/End: Original strand, 16879851 - 16879980
Alignment:
Q  26 tggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaagacgacgaac-a 124  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  16879851 tggatctgcactggatcgaagttgatctgacaatctgaaccgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaagacgacgaacaa 16879950  T
Q  125 accaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||| ||||||||||| ||||||||    
T  16879951 accaacgtcgcacgaagacgatgaaatcac 16879980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 26 - 154
Target Start/End: Original strand, 16991984 - 16992113
Alignment:
Q  26 tggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaagacgacgaac-a 124  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  16991984 tggatctgcactggatcgaagttgatctgacaatctgaaccgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaagacgacgaacaa 16992083  T
Q  125 accaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||| ||||||||||| ||||||||    
T  16992084 accaacgtcgcacgaagacgatgaaatcac 16992113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 5930665 - 5930522
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  5930665 ccaaaatcattgattggatctgcactggatcgaagctgatctcacaatctgaaccgatcaaatacatgatagaaacaagaaaaacaaacaacgtcgcaca 5930566  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    || ||||||||| ||||||| || ||||||||||||||||||||    
T  5930565 aaaacgacgaacaaaccaacatcgcacgaagacgacgaaatcac 5930522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 43929161 - 43929307
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||| ||||||||| ||||||| ||||||| |||||||||| ||||||||||||||| |||||||||||| ||||||    
T  43929161 cgtggatgacgccaaagtcattgattgaatctgcacttgatcgaaactgatctaacaatctgaaccgatcaaatacctgatagaaacaagaaagacaaac 43929260  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgac 146  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||    
T  43929261 aacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgac 43929307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 3390676 - 3390531
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||         ||||||    
T  3390676 cgtggatgacgccaaagtcattgattggatctgcactggatcgaagcttatctgacaatctgaactgatcaaatacctgagagaa---------acaaac 3390586  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  3390585 aacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcac 3390531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 3603233 - 3603084
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    |||||| |||||||||||||||||||||||||||||||||| |||| |  |||| ||||  ||||||||| |||||||||||||   |||||||||||||    
T  3603233 atgacgtcaaagtcattgattggatctgcactggatcgaagttgatatagcaatttgaacggatcaaatatctgagagaaacaaaccaaacaaacaacgt 3603134  T
Q  106 cgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||||||| |||||||||| ||||||||||| ||||||||    
T  3603133 cgcacaaagacgacgaacaaaccaacgtcgcacgaagacgatgaaatcac 3603084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 19580874 - 19581017
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||||||   |||||| |||||||||||||||||||||    
T  19580874 ccaaagtcattgatttgatatgcactggatcgaagctgatctgacaatctgaatcgaacaaatacctgaacaaaacaaaaaaaacaaacaacgtcgcaca 19580973  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||| || ||| ||| ||| |||||||| |||||||    
T  19580974 aagacgacgaacaaaacaatgtcgcactaagacgacaaaatcac 19581017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 7443432 - 7443581
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||| ||||||||||||||| |||||||||||||| ||||||||||| |||||||||| ||| |||||||| ||   |||||||||| |||||||||||    
T  7443432 atgactccaaagtcattgatttgatctgcactggattgaagctgatcttacaatctgaaccgaacaaatacccgaacaaaacaagaaagacaaacaacgt 7443531  T
Q  106 cgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||||||| || ||||||| ||| |||||| |||||||||    
T  7443532 cgcacaaagacgacgaacaaaacaacgtcgcactaagacggcgaaatcac 7443581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 6 - 149
Target Start/End: Complemental strand, 10589343 - 10589199
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||| ||||||||||||||| ||||||||||||||| |||||||||||||| |||||| ||| |||||||| ||   |||||||||| |||||||||||    
T  10589343 atgactccaaagtcattgatttgatctgcactggatcaaagctgatctgacactctgaaccgaacaaatacccgaacaaaacaagaaagacaaacaacgt 10589244  T
Q  106 cgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaa 149  Q
    |||||||||||||||||| || ||||||| ||| |||||||||||    
T  10589243 cgcacaaagacgacgaacaaaacaacgtcgcacaaagacgacgaa 10589199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 4878608 - 4878721
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||| ||||||||| |  ||| ||||||| |||||||||||||||||    
T  4878608 ccaaagtcattgatttgatctgcactggatcgaagctgatatgacaatctgaaccgaacaaatacctaaacgaagcaagaaagacaaacaacgtcgcaca 4878707  T
Q  112 aagacgacgaacaa 125  Q
    ||||||||||||||    
T  4878708 aagacgacgaacaa 4878721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 26491543 - 26491401
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||| |||||| ||||  ||||||||||| |||||||||||| ||||    
T  26491543 ccaaagtcattgatttgatctgcactagatcgaagctgatctgacaatctgaatcgaacaaata-ctgaacgaaacaagaaacacaaacaacgtcacaca 26491445  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||  ||| || ||||||| ||| ||||||||||||||||    
T  26491444 aagacgaaaaacaaaacaacgtcgcactaagacgacgaaatcac 26491401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 16720709 - 16720858
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||| |||||| || ||||||||||||||||  |||| |||||||| ||| |||||||| ||| ||||||||||| || ||||||||||||||||    
T  16720709 cgtggatgaagccaaaatcgttgattggatctgcacgagatcaaagctgatttgataatctgaaccgaacaaatacctgaaagtaacaagaaaaacaaac 16720808  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaa 149  Q
    |||||| |||||||||||||||| ||| |||||| ||| |||||||||||    
T  16720809 aacgtcacacaaagacgacgaacaaactaacgtcgcacaaagacgacgaa 16720858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 14 - 125
Target Start/End: Complemental strand, 24500727 - 24500616
Alignment:
Q  14 aaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaa 113  Q
    ||||||||| ||| |||||||||||||||||||||||||||| |||||||| ||| ||||||| |||   |||||||||| |||||||||||||||||||    
T  24500727 aaagtcattcatttgatctgcactggatcgaagctgatctgataatctgaaccgaacaaatacatgaacaaaacaagaaagacaaacaacgtcgcacaaa 24500628  T
Q  114 gacgacgaacaa 125  Q
    ||||||||||||    
T  24500627 gacgacgaacaa 24500616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 15673840 - 15673949
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| |||||  ||||||||||||||||| |||||||||||| ||| |||| ||||||  ||||||||||| |||||||||||||||||    
T  15673840 ccaaagtcattgatttgatctatactggatcgaagctgatatgacaatctgaatcgaacaaaaacctgaacgaaacaagaaagacaaacaacgtcgcaca 15673939  T
Q  112 aagacgacga 121  Q
    ||||||||||    
T  15673940 aagacgacga 15673949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 8 - 154
Target Start/End: Original strand, 25622912 - 25623060
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaa-gaaaaacaaacaacgtc 106  Q
    |||| ||||||||||||||| |||||||||| ||| |||||||| |||||||||||| |||  |||||||||||  |||||| |||| |||||||||| |    
T  25622912 gacgtcaaagtcattgattgaatctgcactgaatctaagctgatatgacaatctgaaccgaaaaaatacctgagtaaaacaaggaaagacaaacaacgcc 25623011  T
Q  107 gcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||| || ||| ||| ||| ||||||||||||||||    
T  25623012 gcacaaagacgacgaacaaaacaatgtcgcactaagacgacgaaatcac 25623060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 29734432 - 29734289
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||| ||||| | |||  ||||| ||||  ||||||||||||| |||    
T  29734432 ccaaagtcattgatttgatctgcactggatcgaagttgatctgacaatctgaatcgaacaaatccttgaacgaaaccagaaggacaaacaacgtcgtaca 29734333  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    | |||||| ||| || ||||||||||| |||||||| |||||||    
T  29734332 acgacgacaaacaaaacaacgtcacactaagacgacaaaatcac 29734289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 150
Target Start/End: Complemental strand, 37883895 - 37883756
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| |||||||| |||||| |||||||| |||||||||||| ||| ||||||| | |  ||||||||||| ||||||||| |||||||    
T  37883895 ccaaagtcattgatttgatctgcattggatcaaagctgatatgacaatctgaatcgaacaaatacgtcaacgaaacaagaaagacaaacaacatcgcaca 37883796  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaa 150  Q
    |||||||||||| || ||||||| ||| ||||| ||||||    
T  37883795 aagacgacgaacaaaacaacgtcgcactaagacaacgaaa 37883756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 10 - 104
Target Start/End: Complemental strand, 20036626 - 20036532
Alignment:
Q  10 cgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacg 104  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||  || |||||||||||  ||||||||||| ||||||||||    
T  20036626 cgccaaagtcattgattggatctgcactggatcgaagccaatctgacaatctgaactgaacaaatacctgaacgaaacaagaaagacaaacaacg 20036532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 8 - 153
Target Start/End: Complemental strand, 28228468 - 28228322
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    |||||||||||||||||||||||||||| |||||| |||||||| |||||||||||| ||| ||||||| |||  ||||||||||| ||||||||   ||    
T  28228468 gacgccaaagtcattgattggatctgcattggatcaaagctgatatgacaatctgaaccgaacaaatacttgaacgaaacaagaaagacaaacaaaaccg 28228369  T
Q  108 cacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatca 153  Q
    ||||||||  |||||| ||||||| || ||| | ||| |||||||||    
T  28228368 cacaaagataacgaacaaaccaacatcgcactatgacaacgaaatca 28228322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 29812487 - 29812629
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||| ||||||||||||||||||||||||| || ||||| | |||||| ||| ||| || ||||||||  ||||||||||| | |||||||  ||||||    
T  29812487 ccaaaatcattgattggatctgcactggatctaaactgatataacaatccgaaccgaacacatacctgaatgaaacaagaaagaaaaacaacaccgcaca 29812586  T
Q  112 aagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||   ||||| ||| ||||||||||||||||    
T  29812587 aagacgacgaacaaaacacgtcgcactaagacgacgaaatcac 29812629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 13268818 - 13268679
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgaga-gaaacaagaaaaacaaacaacgtc 106  Q
    |||||||||||| |||||||||| |||| |||||| ||| ||||||||||||||||| |||  |||||||| ||| ||||| | ||| ||||||||||||    
T  13268818 gacgccaaagtcgttgattggatatgcattggatcaaagttgatctgacaatctgaatcgaataaatacct-agacgaaacgaaaaagacaaacaacgtc 13268720  T
Q  107 gcacaaagacgacgaac-aaccaacgtcacacgaagacgac 146  Q
    ||||||||||||||||| || ||||||| ||| ||||||||    
T  13268719 gcacaaagacgacgaacaaaacaacgtcgcactaagacgac 13268679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 25237205 - 25237340
Alignment:
Q  14 aaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaa 113  Q
    |||||||||||||| ||||||||||||| |||||||||||| ||| ||||| ||| |||||||| |     ||| | |||||||||||| ||||||||||    
T  25237205 aaagtcattgattgaatctgcactggattgaagctgatctggcaacctgaatcgaacaaatacccg-----aacgaaaaaaacaaacaatgtcgcacaaa 25237299  T
Q  114 gacgacgaac-aaccaacgtcacacgaagacgacgaaatca 153  Q
    |||||||||| || ||||||| ||| |||||||||||||||    
T  25237300 gacgacgaacaaaacaacgtcgcactaagacgacgaaatca 25237340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 151
Target Start/End: Complemental strand, 19953810 - 19953672
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaa 112  Q
    ||||||||||||||| ||||||| |||||  ||| ||||||||||||||||| ||| ||||||| |||   |||||||||| |||||||||| |||||||    
T  19953810 caaagtcattgattg-atctgcattggatttaagatgatctgacaatctgaaccgaacaaatacttgaacaaaacaagaaagacaaacaacgccgcacaa 19953712  T
Q  113 agacgacgaacaac-caacgtcacacgaagacgacgaaat 151  Q
    ||||||| |||||| |||||||  || |||||||||||||    
T  19953711 agacgacaaacaacacaacgtcgtactaagacgacgaaat 19953672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 2251213 - 2251360
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaag---aaaaacaaacaa 102  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||  || |||| ||||      ||||||   ||| ||||||||    
T  2251213 atgacgccaaagtcattggttggatttgcactggatcgaagctgatctgacaatctgaattgaacaaacacct-----caacaagggaaaagacaaacaa 2251307  T
Q  103 cgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||| ||| || || |||| ||| ||||||||||||||||    
T  2251308 cgtcgcacaaagacgacaaacaaaacagcgtcgcactaagacgacgaaatcac 2251360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 9715413 - 9715559
Alignment:
Q  9 acgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgc 108  Q
    |||||||||||||||||||||| |||||||||| ||| ||||| ||||||| |||| | | |||||||||||  ||||||||||| |||||||| | |||    
T  9715413 acgccaaagtcattgattggatatgcactggattgaatctgatatgacaatttgaaccaaacaaatacctgaacgaaacaagaaagacaaacaatgccgc 9715512  T
Q  109 acaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||| ||| ||| || ||||||   || ||||||||||||||||    
T  9715513 acaaagatgacaaacaaatcaacgttgtactaagacgacgaaatcac 9715559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 11550463 - 11550581
Alignment:
Q  8 gacgccaaagtcattgatt-ggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtc 106  Q
    ||||||||||||||||||| |||||| ||||||||| ||| || |||||||||||||| ||| ||||||| |||  ||||||||||| ||||| |||| |    
T  11550463 gacgccaaagtcattgatttggatctacactggatctaagttgttctgacaatctgaaccgaacaaatacttgaacgaaacaagaaagacaaaaaacgcc 11550562  T
Q  107 gcacaaagacgacgaacaa 125  Q
    ||||||||||||| |||||    
T  11550563 gcacaaagacgacaaacaa 11550581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 5071236 - 5071385
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaa-acaaacaacg 104  Q
    |||||||||||||||| | |||||||| |||| |||||||| ||||||||||||||||| ||| |||| |||||| | ||   |||||| |||||||| |    
T  5071236 atgacgccaaagtcatcggttggatctacactagatcgaagttgatctgacaatctgaaccgaacaaacacctga-acaagagagaaaagacaaacaaag 5071334  T
Q  105 tcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||| ||| || ||||||  ||| |||| |||||||||||    
T  5071335 tcgcacaaagacgacaaacaaaacaacgttgcactaagatgacgaaatcac 5071385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 35353888 - 35353833
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatct 61  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  35353888 atgacgccaaagtcattggttggatctgcactggatcgaagatgatctgacaatct 35353833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 12 - 103
Target Start/End: Original strand, 42105637 - 42105727
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaac 103  Q
    ||||||||||||||| ||||||||||| |||||||||||| ||||||| |||| ||| |||||||||||  |||||||  ||||||||||||    
T  42105637 ccaaagtcattgatttgatctgcactgaatcgaagctgatttgacaatttgaatcgaacaaatacctgaacgaaacaa-caaaacaaacaac 42105727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 3397845 - 3397903
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaa 64  Q
    |||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||    
T  3397845 atgacgccaaagtcattggttgaatctgcactggatcgaagatgatctgacaatctgaa 3397903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 40125598 - 40125525
Alignment:
Q  45 agctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaagacga 118  Q
    |||||||||||||||||||| |||  ||||||||||  ||||||||||| ||||| ||||||||||||||||||    
T  40125598 agctgatctgacaatctgaatcgaataaatacctgaacgaaacaagaaagacaaagaacgtcgcacaaagacga 40125525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 41842118 - 41842047
Alignment:
Q  84 aaacaagaaaaacaaacaacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||| ||||||||||  ||||||||||||||||| |||||||||| ||| ||||||||||||||||    
T  41842118 aaacaagaaagacaaacaacgcagcacaaagacgacgaacaaaccaacgtcgcactaagacgacgaaatcac 41842047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 8 - 151
Target Start/End: Original strand, 17068784 - 17068927
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    |||| |||| |||||| || |||||||||||||| ||||||||||| ||||| | |||  || |||||||  |  ||||||| ||| |||||||||  ||    
T  17068784 gacgtcaaaatcattgttttgatctgcactggattgaagctgatctaacaatttaaaggaat-aaatacccaaacgaaacaaaaaagacaaacaacaccg 17068882  T
Q  108 cacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaat 151  Q
    |||||||||||||||| || ||||||| ||| |||||||| ||||    
T  17068883 cacaaagacgacgaacaaaacaacgtcgcactaagacgacaaaat 17068927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 17118687 - 17118798
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaa 112  Q
    |||| |||||| || |||||||||| ||| ||||||||||||||||||| ||| ||  |||||||  |  ||||||| ||| |||||||||  |||||||    
T  17118687 caaaatcattgttttgatctgcactagattgaagctgatctgacaatctaaag-gaataaatacccaaacgaaacaaaaaagacaaacaacaccgcacaa 17118785  T
Q  113 agacgacgaacaa 125  Q
    |||||||||||||    
T  17118786 agacgacgaacaa 17118798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 31125245 - 31125317
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacct 78  Q
    ||||||||||||||||||||||||||| ||||  ||||||| |||| |||||||||||| ||| |||| ||||    
T  31125245 atgacgccaaagtcattgattggatctacactaaatcgaagttgatatgacaatctgaatcgaacaaacacct 31125317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 31262821 - 31262877
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaa 64  Q
    |||||||||||| ||||||| || |||||| ||| ||||||||||||||||||||||    
T  31262821 gacgccaaagtcgttgattgaatttgcactcgattgaagctgatctgacaatctgaa 31262877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 154
Target Start/End: Original strand, 43929316 - 43929371
Alignment:
Q  100 caacgtcgcacaaagacgacgaacaa-ccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||| |||||||||||||| |||| ||| ||||||||||||||||||||    
T  43929316 caacgtcgcacgaagacgacgaacaaaccaatgtcgcacgaagacgacgaaatcac 43929371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 802960 - 803021
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaa 73  Q
    ||||||||||||||| |||||||||| |||||||| || ||| |||||||||| ||| ||||    
T  802960 ccaaagtcattgattagatctgcacttgatcgaagatggtctaacaatctgaaccgaacaaa 803021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 97 - 144
Target Start/End: Complemental strand, 10589224 - 10589176
Alignment:
Q  97 aaacaacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacg 144  Q
    ||||||||||||||||||||||||||| || ||||||||||| ||||||    
T  10589224 aaacaacgtcgcacaaagacgacgaacaaaacaacgtcacactaagacg 10589176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 17095374 - 17095497
Alignment:
Q  28 gatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaagacgacgaac-aac 126  Q
    |||||||||| ||| ||||||||||| ||||||| |||  || |||||||  |  ||||||| ||| |||||||||   ||||||||||||||||| ||     
T  17095374 gatctgcactagattgaagctgatctaacaatctaaaggaat-aaatacccaaacgaaacaaaaaagacaaacaacactgcacaaagacgacgaacaaaa 17095472  T
Q  127 caacgtcacacgaagacgacgaaat 151  Q
    ||||||| ||| |||||||| ||||    
T  17095473 caacgtcgcacaaagacgacaaaat 17095497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 12366115 - 12366060
Alignment:
Q  7 tgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctg 62  Q
    |||| ||||||||||||| | ||| ||||||| |||||||||||| ||||||||||    
T  12366115 tgactccaaagtcattgaattgatttgcactgcatcgaagctgatttgacaatctg 12366060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 35353796 - 35353742
Alignment:
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||| ||| || ||||||| ||| ||||||||||||||||    
T  35353796 aacgtcgcacaaagacgacaaacaaaacaacgtcgcactaagacgacgaaatcac 35353742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 149
Target Start/End: Original strand, 43929288 - 43929338
Alignment:
Q  100 caacgtcgcacaaagacgacgaacaa-ccaacgtcacacgaagacgacgaa 149  Q
    ||||||||||| |||||||| ||||| |||||||| |||||||||||||||    
T  43929288 caacgtcgcacgaagacgacaaacaaaccaacgtcgcacgaagacgacgaa 43929338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 31268972 - 31269017
Alignment:
Q  16 agtcattgattggatctgcactggatcgaagctgatctgacaatct 61  Q
    ||||||||||||||| |||||| ||| |||||||||| ||||||||    
T  31268972 agtcattgattggatatgcactcgattgaagctgatcagacaatct 31269017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 122
Target Start/End: Complemental strand, 38105464 - 38105355
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaa 112  Q
    ||||||||||| || ||||| ||||| ||||||| || | |||||| ||||| ||| ||||  |||||   | ||| |||| |||| ||||||||||| |    
T  38105464 caaagtcattgtttagatcttcactgtatcgaagatggtatgacaacctgaaccgaacaaacgcctgaacaagacaggaaagacaagcaacgtcgcacta 38105365  T
Q  113 agacgacgaa 122  Q
    ||||||||||    
T  38105364 agacgacgaa 38105355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 246
Target Start/End: Complemental strand, 25516455 - 25516427
Alignment:
Q  218 ggtttgtgtgacggctcacaggagagaaa 246  Q
    |||||||||||||||||||||||||||||    
T  25516455 ggtttgtgtgacggctcacaggagagaaa 25516427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 31269050 - 31269110
Alignment:
Q  95 acaaacaacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||| ||||||||||| ||||||| || ||| ||| ||| ||||||||||||||||    
T  31269050 acaaacaacatcgcacaaagaagacgaacaaaacaatgtcgcactaagacgacgaaatcac 31269110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 12 - 64
Target Start/End: Original strand, 32347555 - 32347606
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaa 64  Q
    |||||||| ||||||||||||  ||| ||||||| ||||||||||||||||||    
T  32347555 ccaaagtc-ttgattggatctatactagatcgaacctgatctgacaatctgaa 32347606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 37
Target Start/End: Complemental strand, 34471211 - 34471183
Alignment:
Q  9 acgccaaagtcattgattggatctgcact 37  Q
    |||||||||||||||||||||||||||||    
T  34471211 acgccaaagtcattgattggatctgcact 34471183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 246
Target Start/End: Complemental strand, 41176823 - 41176795
Alignment:
Q  218 ggtttgtgtgacggctcacaggagagaaa 246  Q
    |||||||||||||||||||||||||||||    
T  41176823 ggtttgtgtgacggctcacaggagagaaa 41176795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 246
Target Start/End: Complemental strand, 43566838 - 43566810
Alignment:
Q  218 ggtttgtgtgacggctcacaggagagaaa 246  Q
    |||||||||||||||||||||||||||||    
T  43566838 ggtttgtgtgacggctcacaggagagaaa 43566810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 134; Significance: 1e-69; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 16996750 - 16996903
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16996750 cgtggatgacgccaaagtcattgattggatctgcactggatcgaagccgaactgacaatctgaagcgatcaaatacctgagagaaacaggaaaaacaaac 16996849  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16996850 aacgtcgcacaaagacgacgaacaaccaacgtcgcacgaagacgacgaaatcac 16996903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 8054673 - 8054822
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  8054673 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaaccgatcaaatacctgagagaaacaagaaagacaaacaacgt 8054772  T
Q  106 cgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  8054773 cgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcac 8054822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 44295569 - 44295415
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  44295569 cgtggatgacgtcaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaactgatcaaatacctgagagaaacaagaaaaacaaac 44295470  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  44295469 aacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcac 44295415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 37129536 - 37129688
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37129536 cgtggatgacgccaaagtcattgattggatctgcacttgatcgaagctgatctgacaatctgaagcgttcaaatacctgagagaaacaagaaaaacaaac 37129635  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    || |||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  37129636 aatgtcgcacaaagacgacgaacaaccaacgtcgcac-aagacgacgaaatcac 37129688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 14115689 - 14115843
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14115689 cgtggatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaaccgatcaaatacctgagagaaacaagaaaaacaaac 14115788  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||  ||||| |||||| |||||| ||||||||||||||||||| |||||||||||    
T  14115789 aatttcgcaaaaagacaacgaacaaaccaacgtcacacgaagatgacgaaatcac 14115843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 32413038 - 32412889
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||| |    
T  32413038 atgacgccaaagtcattgattggatctgcacaggatcgaagctgatctgacaatctgaaccaatcaaatacctgaaagaaacaagaaaaacaaacaacat 32412939  T
Q  106 cgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||| |||| |||||||||| ||||||||||||||||||||    
T  32412938 cgcacaaagacgatgaacaaaccaacgtcgcacgaagacgacgaaatcac 32412889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 5457324 - 5457170
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||| |||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||    
T  5457324 cgtggatgacggcaaagttattgattggatctgcactagatcgaagctgatctgacaatctgaaccgatcaaatacttgagagaaacaagaaagacaaac 5457225  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||    
T  5457224 aacgtcgcacgaagacgacgaactaaccaacgtcgcacgaagacgacgaaatcac 5457170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 10 - 154
Target Start/End: Complemental strand, 9270265 - 9270120
Alignment:
Q  10 cgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgca 109  Q
    |||| ||| ||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  9270265 cgccgaagccatcgattggatctgcactggatcgaagctgatatgacaatctgaaccgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgca 9270166  T
Q  110 caaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||| |||||||||| ||||||||| ||||||||||    
T  9270165 caaagacgacgaacaaaccaacgtcgcacgaagacaacgaaatcac 9270120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 41996796 - 41996644
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||      
T  41996796 cgtggatgacgccaaagtcattgattggatctgcactgaatcgaagctgatctgacaatctgaaccgatcaaatacctgagagaatcaagaaagacaa-- 41996699  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||    
T  41996698 aacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgatgaaatcac 41996644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 9992920 - 9992766
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||| ||||||||||||||| ||||| |||||| |||||||||| |||| |||||||||| || |||||||||||||||||||||    
T  9992920 cgtggatgacgccaaagtcgttgattggatctgcattggattgaagcttatctgacaatttgaaccgatcaaatatctaagagaaacaagaaaaacaaac 9992821  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    || ||| |||||||||||||||| |||||||||| ||||||||||||||||||||    
T  9992820 aatgtcacacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcac 9992766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 32104711 - 32104853
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaa 112  Q
    |||||| |||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||    
T  32104711 caaagttattgattgaatctgcactggatcgaaactgatctgacaatctgaaccgatcaaatacctgagagaaacaagaaagacaaacaacgttgcacaa 32104810  T
Q  113 agacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||| ||| ||| ||||||||||  |||||||||||||||||||    
T  32104811 agatgacaaacaaaccaacgtcgtacgaagacgacgaaatcac 32104853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 29 - 154
Target Start/End: Complemental strand, 31874309 - 31874183
Alignment:
Q  29 atctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaagacgacgaac-aacc 127  Q
    |||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  31874309 atctgcactggatcgaagatgttctgacaatctgaaccgatcaaatacctgagagaaacaagaaaaacaaacaatgtcgcacaaagacgacgaacaaacc 31874210  T
Q  128 aacgtcacacgaagacgacgaaatcac 154  Q
    |||||  ||| |||||||| |||||||    
T  31874209 aacgttgcacaaagacgacaaaatcac 31874183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 11 - 154
Target Start/End: Original strand, 36545652 - 36545796
Alignment:
Q  11 gccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcac 110  Q
    |||||||||||||||||| | ||||||||||| ||||| ||||||||| ||||| |||||||||||||||||||||  ||||||||| | ||||||||||    
T  36545652 gccaaagtcattgattgggtttgcactggatcaaagctaatctgacaacctgaatcgatcaaatacctgagagaaaatagaaaaacatagaacgtcgcac 36545751  T
Q  111 aaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||| ||| |||||||||| ||| |||||||| |||||||    
T  36545752 aaagacgactaacaaaccaacgtcgcacaaagacgacaaaatcac 36545796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 5328198 - 5328095
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||| ||||||  ||||||||||||||||||||||    
T  5328198 gacgccaaagtcattgattggatctgcactagatcaaagctgatctgacaatctgaaccgatcaaatacttgagag--acaagaaaaacaaacaacgtcg 5328101  T
Q  108 cacaaa 113  Q
    ||||||    
T  5328100 cacaaa 5328095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 37659207 - 37659065
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaa 112  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||| |||  |||||||||||  |||||||||||| ||||    
T  37659207 caaagtcattgatttgatctgcactggatcgaagctgatctgacaatctgaaccgaacaaatacttgaacgaaacaagaaaggcaaacaacgtcgtacaa 37659108  T
Q  113 agacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||| || ||| ||| ||| ||||| ||||||||||    
T  37659107 agacgacgaacaaaacaaggtcgcactaagacaacgaaatcac 37659065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 31712948 - 31713061
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||| ||||||||| |  ||| ||||||| |||||||||||||||||    
T  31712948 ccaaagtcattgatttgatctgcactggatcgaagctgatatgacaatctgaaccgaacaaatacctaaacgaagcaagaaagacaaacaacgtcgcaca 31713047  T
Q  112 aagacgacgaacaa 125  Q
    ||||||||||||||    
T  31713048 aagacgacgaacaa 31713061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 8 - 154
Target Start/End: Original strand, 5917617 - 5917757
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||| ||| |||||||||||   ||| | |||| |||||||||||||    
T  5917617 gacgccaaagtcattgattggatctgcactggatc-------atctgacaatctgaaccgaacaaatacctgaacaaaataggaaagacaaacaacgtcg 5917709  T
Q  108 cacaaagacgacgaacaac-caacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||| ||||||| ||| ||||||||||||||||    
T  5917710 cacaaagacgacgaacaacacaacgtcgcactaagacgacgaaatcac 5917757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 12248583 - 12248729
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatc---tgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgc 108  Q
    ||||||||||||||| |||||||||||| |||||| |||||   ||| |||||||| ||| |||||||||||  ||||||||||| ||||||||||||||    
T  12248583 ccaaagtcattgatttgatctgcactggttcgaagttgatcatctgataatctgaatcgaacaaatacctgaatgaaacaagaaagacaaacaacgtcgc 12248682  T
Q  109 acaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||| || ||| ||| ||| ||||||||||||||||    
T  12248683 acaaagacgacgaacaaaacaaggtcgcactaagacgacgaaatcac 12248729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 6 - 153
Target Start/End: Complemental strand, 15665787 - 15665639
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||| |||||||||||   ||||| || | ||||||||||     
T  15665787 atgacaccaaagtcattgattggatctgcactggatctaagctgacctgacaatctgaaccgaacaaatacctgaacaaaacaggatagacaaacaacgc 15665688  T
Q  106 cgcacaaagacgacgaacaac-caacgtcacacgaagacgacgaaatca 153  Q
     ||||||||||||| |||||| |||| || ||| |||||||||||||||    
T  15665687 tgcacaaagacgacaaacaacacaacatctcactaagacgacgaaatca 15665639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 14 - 153
Target Start/End: Complemental strand, 26937765 - 26937625
Alignment:
Q  14 aaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaa 113  Q
    ||||||||||||||||| |||||| |||| ||||||||||||||||||||| |||  ||||||||||  ||||||||||| |||||||||| ||||||||    
T  26937765 aaagtcattgattggatttgcactagatcaaagctgatctgacaatctgaaccgaataaatacctgaacgaaacaagaaagacaaacaacgccgcacaaa 26937666  T
Q  114 gacgacgaac-aaccaacgtcacacgaagacgacgaaatca 153  Q
    | |||||||| |||||||| | ||| |||||||| ||||||    
T  26937665 gtcgacgaacaaaccaacgacgcactaagacgacaaaatca 26937625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 3925562 - 3925705
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| |||||||||| |||||||||||||||||| ||||||| ||| |||||||||||  |||||||||||  ||||||| ||||||||    
T  3925562 ccaaagtcattgatttgatctgcacttgatcgaagctgatctgactatctgaatcgaacaaatacctgaatgaaacaagaaaggcaaacaaggtcgcaca 3925661  T
Q  112 aagacgacg-aacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||| || || ||| ||  ||| ||||||||||||||||    
T  3925662 aagacgacgaaaaaaacaaggttgcactaagacgacgaaatcac 3925705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 5989870 - 5989729
Alignment:
Q  14 aaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaa 113  Q
    |||||||||||||| |||||||||| ||||||| ||| ||||||||||||| |||  |||||| |||| |||| |||||| |||||||||| ||||||||    
T  5989870 aaagtcattgattgaatctgcactgaatcgaagttgacctgacaatctgaaccgaagaaatacttgagcgaaataagaaagacaaacaacgccgcacaaa 5989771  T
Q  114 gacgacgaaca-accaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||| ||||||||| ||| || ||||| |||||||    
T  5989770 gacgacgaacataccaacgtcgcactaaaacgacaaaatcac 5989729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 16937211 - 16937354
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||   | |||||||||||  |||||| ||||  ||||||| ||||||||    
T  16937211 ccaaagtcattgatttgatatgcactggatcgaagctgatctgacaatctgaactaaacaaatacctgaacgaaacacgaaaggcaaacaatgtcgcaca 16937310  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||| |||| || ||| ||| ||| ||||||||||||||||    
T  16937311 aagacgatgaacaaaacaaggtcgcactaagacgacgaaatcac 16937354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 153
Target Start/End: Complemental strand, 10043014 - 10042872
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||| ||||||| |||||||||| ||||||||||||||||||||| ||||  || |||||||||||  ||||||||||| ||||| ||||||||||     
T  10043014 ccaaagttattgatttgatctgcactagatcgaagctgatctgacaatttgaactgaacaaatacctgaacgaaacaagaaagacaaataacgtcgcact 10042915  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaatca 153  Q
    ||||| |||||| || ||||||  ||| |||||||||||||||    
T  10042914 aagacaacgaacaaaacaacgttgcactaagacgacgaaatca 10042872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 12244089 - 12244231
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaa 112  Q
    ||||||||||||||||||||||| |||||| |||||||| |||||||||||| ||| |||||||||||  ||||||| ||  |||||||||| |||||||    
T  12244089 caaagtcattgattggatctgcattggatcaaagctgatatgacaatctgaatcgaacaaatacctgaacgaaacaaaaacgacaaacaacgccgcacaa 12244188  T
Q  113 agacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||  ||||||| || ||||||| ||| |||| |||||||||||    
T  12244189 agttgacgaacaaaacaacgtcgcactaagatgacgaaatcac 12244231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 23766982 - 23766868
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaa-acaaacaacgtcgcac 110  Q
    |||||||||||||||  |||| ||||||||||||||||||||||||||||||| ||| ||||||| |||  ||| ||| |||| ||||||||||||||||    
T  23766982 ccaaagtcattgatttaatctacactggatcgaagctgatctgacaatctgaatcgaacaaatacatgaatgaaccaaaaaaatacaaacaacgtcgcac 23766883  T
Q  111 aaagacgacgaacaa 125  Q
    |||||||||||||||    
T  23766882 aaagacgacgaacaa 23766868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 2629153 - 2629011
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| | | | ||||| |||||  ||||||||||| |||||||| ||||||||    
T  2629153 ccaaagtcattgatttgatctgcactggatcgaagctgatctgacaatctg-accaaacaaatgcctgaacgaaacaagaaagacaaacaatgtcgcaca 2629055  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||| |||| || ||  |||||| ||| || |||||||||||||    
T  2629054 aagatgacggacaaaataacgtcgcactaaaacgacgaaatcac 2629011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 32062042 - 32061893
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaa-acaaacaacg 104  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||| |||| |||||| | ||    ||||| |||||||| |    
T  32062042 atgacgccaaagtcattggttggatctgcacttgatcgaagctgatctgacaatctgaaccgaacaaacacctga-acaagagggaaaagacaaacaatg 32061944  T
Q  105 tcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||| ||| || || |||| ||| ||||||||||||||||    
T  32061943 tcgcacaaagacgacaaacaaaacagcgtcgcactaagacgacgaaatcac 32061893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 32256587 - 32256736
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||| ||||||||||||||| |||||||||  ||||||||||||| | ||||||| || ||| |||||||| ||   |||||||||| |||||||||||    
T  32256587 atgactccaaagtcattgatttgatctgcacatgatcgaagctgatttaacaatctaaaccgaacaaatacccgaacaaaacaagaaagacaaacaacgt 32256686  T
Q  106 cgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||| ||| || |||| || ||| |||||| |||||||||    
T  32256687 cgcacaaagacgacaaacaaaacaacatcgcactaagacggcgaaatcac 32256736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 1215207 - 1215354
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    |||| ||||||||||||| ||||||||||||| |||| |||||||| |||||||||||| ||| |||  |||||| | ||  || ||| | |||||||||    
T  1215207 atgaggccaaagtcattggttggatctgcactagatcaaagctgatttgacaatctgaatcgaacaaccacctga-acaaggaa-aaagataaacaacgt 1215304  T
Q  106 cgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||| ||| ||| || ||||||||||| ||||||||||||||||    
T  1215305 cgcacaaagatgacaaacaaaacaacgtcacactaagacgacgaaatcac 1215354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 11 - 154
Target Start/End: Complemental strand, 17019361 - 17019217
Alignment:
Q  11 gccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgaga-gaaacaagaaaaacaaacaacgtcgca 109  Q
    |||||| |||||||||||||||||| |||||| ||| | |||||| |||||||  ||| |||||| || ||| ||||||||||| |||||||||   |||    
T  17019361 gccaaaatcattgattggatctgcattggatcaaagttaatctgaaaatctgatccgaacaaata-cttagatgaaacaagaaagacaaacaacaatgca 17019263  T
Q  110 caaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||| |||||||||| ||| |||||||| |||||||    
T  17019262 caaagacgacgaacaaaccaacgtcgcactaagacgaccaaatcac 17019217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 11 - 154
Target Start/End: Complemental strand, 17549798 - 17549654
Alignment:
Q  11 gccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgaga-gaaacaagaaaaacaaacaacgtcgca 109  Q
    |||||| |||||||||||||||||| |||||| ||| | |||||| |||||||  ||| |||||| || ||| ||||||||||| |||||||||   |||    
T  17549798 gccaaaatcattgattggatctgcattggatcaaagttaatctgaaaatctgatccgaacaaata-cttagatgaaacaagaaagacaaacaacaatgca 17549700  T
Q  110 caaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||| |||||||||| ||| |||||||| |||||||    
T  17549699 caaagacgacgaacaaaccaacgtcgcactaagacgaccaaatcac 17549654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 18190712 - 18190770
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaa 64  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  18190712 atgacgccaaagtcattggttggatctgcactggatcgaagctgatttgacaatctgaa 18190770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 11298625 - 11298745
Alignment:
Q  5 tatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaa-acaaacaac 103  Q
    ||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||  ||| |||| |||||| | ||    ||||| |||||||||    
T  11298625 tatgacgccaaagtcattggttggatctgcactggatcaaagctaatctgacaatctgatccgaacaaacacctga-acaagagggaaaagacaaacaac 11298723  T
Q  104 gtcgcacaaagacgacgaacaa 125  Q
    | |||||||||||||| |||||    
T  11298724 gccgcacaaagacgacaaacaa 11298745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 106
Target Start/End: Complemental strand, 13977649 - 13977556
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtc 106  Q
    ||||||| ||||||| || ||||||| ||||||| |||||||| |||||||| || ||||||||||||  ||||||||||| ||||||||||||    
T  13977649 caaagtcgttgattgaatttgcactgaatcgaagttgatctgataatctgaaccggtcaaatacctgaacgaaacaagaaagacaaacaacgtc 13977556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 28 - 154
Target Start/End: Complemental strand, 14327705 - 14327578
Alignment:
Q  28 gatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaa-acaaacaacgtcgcacaaagacgacgaac-aa 125  Q
    ||||||||||| ||||||||||||||||||||||||| ||| |||| || ||| | |||   ||||| ||||||||||||||||||||||||| ||| ||    
T  14327705 gatctgcactgtatcgaagctgatctgacaatctgaaccgaacaaacacttga-acaaaagggaaaagacaaacaacgtcgcacaaagacgacaaacaaa 14327607  T
Q  126 ccaacgtcacacgaagacgacgaaatcac 154  Q
     ||||||| ||| |||||||| |||||||    
T  14327606 acaacgtcgcactaagacgactaaatcac 14327578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 7281001 - 7281142
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaa 112  Q
    ||||||||| ||||| ||||||||||| ||||||| ||| ||||||||| || ||| ||||||||||   |||||||  || |||||||| || ||||||    
T  7281001 caaagtcatagattgaatctgcactgg-tcgaagcggatatgacaatctaaaccgaacaaatacctgcatgaaacaaataagacaaacaatgttgcacaa 7281099  T
Q  113 agacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||| |||||| ||| ||| | |||| |||||||||    
T  7281100 agacgacgaacaaaccaatgtcgcactatgacggcgaaatcac 7281142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 27534278 - 27534335
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctga 63  Q
    |||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  27534278 atgacgcctaagtcattggttggatctgcactggatcgaagctaatctgacaatctga 27534335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 115
Target Start/End: Complemental strand, 13864601 - 13864498
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    |||||||||| ||||| || ||||||| |||||||||||||||||||||||||  ||  |||||||||    |||||||||| |||||||||| |||| |    
T  13864601 ccaaagtcatggattgaatatgcactgtatcgaagctgatctgacaatctgaactgaagaaatacctgcataaaacaagaaagacaaacaacgccgcaga 13864502  T
Q  112 aaga 115  Q
    ||||    
T  13864501 aaga 13864498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 7269338 - 7269479
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaa 112  Q
    ||||||||| || || ||||||||| | ||||||| ||| ||||||||| || ||| ||||||| ||   ||||||||||| |||||||| || ||||||    
T  7269338 caaagtcatagaatgaatctgcactag-tcgaagcagatatgacaatctaaaccgaacaaatacttgcatgaaacaagaaagacaaacaatgttgcacaa 7269436  T
Q  113 agacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||| ||| |||||||||| ||| | |||||| |||||||    
T  7269437 agacgactaacaaaccaacgtcgcactatgacgacaaaatcac 7269479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 3681130 - 3681055
Alignment:
Q  47 ctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaagacgacgaa 122  Q
    ||||| ||||||||| || ||| |||||||| || |||||||||||| |||||||||||||||  |||||||||||    
T  3681130 ctgatatgacaatctaaaccgaacaaataccagaaagaaacaagaaagacaaacaacgtcgcatgaagacgacgaa 3681055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 101
Target Start/End: Complemental strand, 37720088 - 37719993
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaaca 101  Q
    |||| ||||||||| |||||| ||||||||||||||||||| || ||||| | ||| || ||| |||||||| ||  ||||||||||| |||||||    
T  37720088 atgaagccaaagtctttgattagatctgcactggatcgaagttggtctgatattctaaaccgaacaaatacccgaacgaaacaagaaagacaaaca 37719993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 154
Target Start/End: Original strand, 26582792 - 26582903
Alignment:
Q  43 gaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaagacgacgaa-caaccaacgtcacacgaag 141  Q
    |||||||||||||||||||||| ||| |||||| | ||  |||||||| ||||||||||||   |||||||| |||||||  ||||||| || ||| |||    
T  26582792 gaagctgatctgacaatctgaatcgaacaaatatccgaacgaaacaag-aaaacaaacaacaatgcacaaagtcgacgaataaaccaacatcgcactaag 26582890  T
Q  142 acgacgaaatcac 154  Q
    || ||||||||||    
T  26582891 acaacgaaatcac 26582903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 31147696 - 31147811
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatc---tgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacg 104  Q
    |||| ||||||||||||||||||||||| |||||  ||| |||||   |||||| ||||| ||| |||||||||||  ||||||  ||||| || ||||     
T  31147696 gacgtcaaagtcattgattggatctgcattggattaaagttgatcacatgacaaactgaaccgaacaaatacctgaatgaaaca--aaaaagaaccaacc 31147793  T
Q  105 tcgcacaaagacgacgaa 122  Q
    |||||| |||||||||||    
T  31147794 tcgcactaagacgacgaa 31147811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 18890774 - 18890832
Alignment:
Q  96 caaacaacgtcgcacaaagacgacgaacaac-caacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||| ||||||||||||| ||||||| ||| ||||||||||||||||    
T  18890774 caaacaacgtcgcacaa-gacgacgaacaacacaacgtcgcactaagacgacgaaatcac 18890832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 14919260 - 14919313
Alignment:
Q  11 gccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaa 64  Q
    |||||||||||| |||| || ||||||||||| ||| |||||||||||||||||    
T  14919260 gccaaagtcattaattgaatttgcactggatcaaagttgatctgacaatctgaa 14919313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 153
Target Start/End: Original strand, 16938151 - 16938285
Alignment:
Q  14 aaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaa 113  Q
    |||||||||||||| |||||||||      ||||||||||| ||| ||||| ||| |||||||| ||   ||| || ||| ||||||||||  |||||||    
T  16938151 aaagtcattgattgaatctgcact------aagctgatctggcaacctgaaccgaacaaatacccgaactaaataaaaaagacaaacaacgcagcacaaa 16938244  T
Q  114 gacgacgaaca-accaacgtcacacgaagacgacgaaatca 153  Q
     |||||||||| | ||| ||| ||| |||||||||||||||    
T  16938245 tacgacgaacacaacaaagtcgcactaagacgacgaaatca 16938285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 32920892 - 32920843
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctga 55  Q
    ||||||||||||||||||||||||||  ||||||||||||| | ||||||    
T  32920892 atgacgccaaagtcattgattggatccacactggatcgaagttaatctga 32920843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 84 - 127
Target Start/End: Complemental strand, 16809046 - 16809003
Alignment:
Q  84 aaacaagaaaaacaaacaacgtcgcacaaagacgacgaacaacc 127  Q
    |||||||||| |||||||||| ||||||||||| ||||||||||    
T  16809046 aaacaagaaagacaaacaacgccgcacaaagaccacgaacaacc 16809003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 134; Significance: 1e-69; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 11002096 - 11001943
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11002096 cgtgaatgacgccaaagtcattgattagatctgcactgaatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 11001997  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  11001996 aacgttgcacaaagacgacgaacaaccaacgtctcacgaagacgacgaaatcac 11001943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 24475594 - 24475441
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24475594 cgtggatgacgccaaagtcattgattgaatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 24475495  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  24475494 aacgtcgcacaaagacgacgaacaaccaacgtcgcacgtggacgacgaaatcac 24475441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 40775520 - 40775366
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  40775520 cgtggatgacgccaaagtcattgattggatctgcactagatcgaagctgatctgacaatctgaaccgatcaaatacctgagagaaacaagaaaaacaaac 40775421  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  40775420 aacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcac 40775366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 8611485 - 8611638
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8611485 cgtggatgacgccaaagttattgattggatctgcactggatcgaagctgatatgacaatctgaagcgatcaaacacctgagagaaacaagaaaaacaaac 8611584  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  8611585 aacgtcgcacaaagacgactaacaaccaacgtcgcacgaagacgacgaaatcac 8611638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 24470646 - 24470493
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24470646 cgtggatgacgccaaagtcattgattgaatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 24470547  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||||||||||||| ||||  ||||| ||||||||    
T  24470546 aacgtcgcacaaagacgacgaacaaccaacgtcgcacgttgacgatgaaatcac 24470493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 49167178 - 49167025
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  49167178 cgtggatgacgctaaagtcattgattagatctgcactggatcgaagctgatctaacaatctgaagcgatcaaatacctgggagaaacaagaaaaacaaac 49167079  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  49167078 aacgtcgcacaaagacgacgaacaaccaacgtcgcacgaagacgacgaaatcac 49167025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 40476960 - 40476807
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40476960 cgtggatgacgtcaaagtcattgattggatctgcacttgatcgaagctgatctgacaatctgaagtgatcaaatacctgagagaaacaagaaaaacaaac 40476861  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||||||||    
T  40476860 aacgtcgcacaaagacgacgaacaaccaacgttgtacgaagacgacgaaatcac 40476807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 26017519 - 26017673
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||    
T  26017519 cgtgaatgacgccaaagtcattgattggatctgcactggatcgaagctgatatgacaatctgaaccgatcaaatacctgagagaaacaagaaagacaaac 26017618  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| ||||||| || ||||||||||||||||||||    
T  26017619 aacgtcgcacaaagacgacgaacaaaccaacatcgcacgaagacgacgaaatcac 26017673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 135006 - 135160
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||| |||||    
T  135006 cgtggatgacgccaaagtcattgattggatctgcactggatcgaagctgatttgacaatctgaaccgatcaaatacctaagagaaacaagaaaatcaaac 135105  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||    
T  135106 aacgtcgcacaaaaacgacgaacaaaccaacgtcgcacgaagacgacgaaatcac 135160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 7986145 - 7985991
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||    
T  7986145 cgtggatgacgtcaaagtcattgattggatctgcactggatcgaagctgatttgacaatctgaacggatcaaatacctgagagaaacaagaaaaacaaac 7986046  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||| |||||||||||||||| ||||||||||||||||||| |||||||||||    
T  7986045 aacgtcacacaaagacgacgaacaaaccaacgtcacacgaagatgacgaaatcac 7985991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 10 - 154
Target Start/End: Complemental strand, 47749978 - 47749833
Alignment:
Q  10 cgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgca 109  Q
    |||| ||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  47749978 cgccgaagtcatcgattggatctgcactggatcgaaactgatctgacaatctgaaccgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgca 47749879  T
Q  110 caaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||| |||||||||| ||||||||| ||||||||||    
T  47749878 caaagacgacgaacaaaccaacgtcgcacgaagacaacgaaatcac 47749833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 42490956 - 42490802
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||| ||||||||| |||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||    
T  42490956 cgtggatgacgccacagtcattgactggatctgcactagatcgaagctgatctgacagtctgaaccgatcaaatacctgagagaaacaagaaaaacaaac 42490857  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    || ||||||||||| | |||||| |||||||||||||||||||||| ||||||||    
T  42490856 aatgtcgcacaaaggcaacgaacaaaccaacgtcacacgaagacgatgaaatcac 42490802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 43807011 - 43807165
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||| ||||||||||||||||||| ||||||    
T  43807011 cgtggatgccgccaaagtcattgattggatctgcactagatcgaagctgatcttacaatctgaaccgatcaaacacctgagagaaacaagaaagacaaac 43807110  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||| ||||||| ||||||| || ||||||||||||||||||||    
T  43807111 aacgtcgcacaaagatgacgaacaaaccaacatcgcacgaagacgacgaaatcac 43807165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 30992696 - 30992838
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaa 112  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||    
T  30992696 caaagtcattgattggatctgcactagatcgaagttgatctgacaatctgaaccgatcaaatacctgagagaaccaagaaagacaaacaacgtcgcacaa 30992795  T
Q  113 agacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||| || ||||||| |||||||||||| |||||||    
T  30992796 agacgacgaacaaatcaacgtcgcacgaagacgacaaaatcac 30992838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 8319568 - 8319414
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||| ||||||||| |||||||||||||||||| ||||||    
T  8319568 cgtggatgacgccaaagtcattgattgggtctgcactggatcaaagctgatctaacaatctgaaccgatcaaatgcctgagagaaacaagaaagacaaac 8319469  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    || || ||||||||||||||||| ||||||||||  ||||||||||| |||||||    
T  8319468 aaggttgcacaaagacgacgaacaaaccaacgtcgtacgaagacgacaaaatcac 8319414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 11 - 154
Target Start/End: Original strand, 25855091 - 25855235
Alignment:
Q  11 gccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcac 110  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||  ||||||||| | ||||||||||    
T  25855091 gccaaagtcattgattggatttgcactggatcgaagctaatctgacaacctgaaccgatcaaatacctgagagaaaatagaaaaacatataacgtcgcac 25855190  T
Q  111 aaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||| |||||||||| |||||||||||| |||||||    
T  25855191 aaagacgacgaacaaaccaacgtcgcacgaagacgacaaaatcac 25855235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 8 - 154
Target Start/End: Original strand, 23732261 - 23732408
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||| |||||||||||  ||||||||||| ||||||| || ||    
T  23732261 gacgccaaagtcattgattggatctgcactggatcgaagctaatttgacaatctgaaccgaccaaatacctgaacgaaacaagaaagacaaacagcgacg 23732360  T
Q  108 cacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||| ||||||| |||||||||| ||||||||||||||||||||    
T  23732361 cacaaagatgacgaacaaaccaacgtcgcacgaagacgacgaaatcac 23732408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 288 - 394
Target Start/End: Original strand, 41459651 - 41459757
Alignment:
Q  288 ttatgtaccaaagttattattttacaattaagcaacaaatatgatcctgaaataaataaaatgcagaagatataaatgtatcttagcgccaagttccttc 387  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  41459651 ttatgtaccaaagttatcattttacaattaagcaacaaatatgatcctgaaataaataaaatgcagaagatataaatggatcttagcgccaaattccttc 41459750  T
Q  388 attgaag 394  Q
    |||||||    
T  41459751 attgaag 41459757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 19895545 - 19895647
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  19895545 cgtggatgacgccaaagtcattgattgaatctgcactggatcgaagctgatatgacaatctgaaccgatcaaatacctgagagaaacaagaaaaacaaac 19895644  T
Q  101 aac 103  Q
    |||    
T  19895645 aac 19895647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 772689 - 772542
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||| |||||||||||  ||||||||||| ||||||||  |||    
T  772689 gacgccaaagtcattgattggatctgcactagattgaagctgatctgacaatctgaaccgaacaaatacctgaacgaaacaagaaagacaaacaatatcg 772590  T
Q  108 cacaaagacgac-gaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||| ||  || ||||||| ||| ||||||||||||||||    
T  772589 cacaaagacgacagacaaaacaacgtcgcactaagacgacgaaatcac 772542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 28015599 - 28015456
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||| |||||||||||  |||||||||||  ||||||||||||||||    
T  28015599 ccaaagtcattgatttgatctgcactggatcgaagctgatctaacaatctgaaccgaacaaatacctgaacgaaacaagaaaggcaaacaacgtcgcaca 28015500  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||| || ||| ||| ||  ||||||||||||||||    
T  28015499 aagacgacgaacaaaacaaggtcgcattaagacgacgaaatcac 28015456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 37399851 - 37399730
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||| ||| |||||| |||| | ||||||||| ||| |||||||||||| ||||||    
T  37399851 cgtggatgacgtcaaagtcattgattggatctgcactggatcgaagctaatcggacaatttgaatcaatcaaatacttgaaagaaacaagaaagacaaac 37399752  T
Q  101 aacgtcgcacaaagacgacgaa 122  Q
    ||||||||||||||||||||||    
T  37399751 aacgtcgcacaaagacgacgaa 37399730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 47156627 - 47156491
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcg---atcaaatacctgagagaaacaagaaaaacaaacaacgtcgc 108  Q
    ||||||||||||||| ||||||||||| ||||||| |||| ||||||||||||||    ||||||||||||||||||||||         ||||||| ||    
T  47156627 ccaaagtcattgattagatctgcactgtatcgaagttgatatgacaatctgaagcattcatcaaatacctgagagaaacaa---------acaacgttgc 47156537  T
Q  109 acaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  47156536 acaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 47156491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 6 - 122
Target Start/End: Complemental strand, 39090336 - 39090220
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||| ||||||||||||| | ||| |||||||||||||||||||| |||||||||||| ||| |||||||||||  ||||||||||| |||||||||||    
T  39090336 atgactccaaagtcattgaattgatttgcactggatcgaagctgatatgacaatctgaaccgaacaaatacctgaacgaaacaagaaagacaaacaacgt 39090237  T
Q  106 cgcacaaagacgacgaa 122  Q
    |||||||||| ||||||    
T  39090236 cgcacaaagatgacgaa 39090220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 5024928 - 5025071
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| |||||| ||||||||||| |||||||||||||||||| ||| ||||||||| |  |||| ||||||   |||||||||||||||    
T  5024928 ccaaagtcattgatttgatctggactggatcgaatctgatctgacaatctgaaccgaacaaatacctaaatgaaataagaaaggaaaacaacgtcgcaca 5025027  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||| || ||| ||| ||| ||||||||||||||||    
T  5025028 aagacgacgaacaaaacaaggtcgcactaagacgacgaaatcac 5025071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 9934085 - 9933946
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||| | | |||||||||||  ||||||||||| |||   |||||||||||    
T  9934085 ccaaagtcattgatttgatctgcactggatcaaagctgatctgacaatctgaatc-aacaaatacctgaacgaaacaagaaagaca---aacgtcgcaca 9933990  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||| || ||||||| ||| |||||| |||||||||    
T  9933989 aagacgacgaacaaaacaacgtcgcactaagacggcgaaatcac 9933946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 14707823 - 14707682
Alignment:
Q  14 aaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaa 113  Q
    ||||||||| |||||||||||| |||||||||| ||||| |||||| |||| ||| ||||||||| |  ||||||||||| |||||||||| ||||||||    
T  14707823 aaagtcattaattggatctgcattggatcgaagatgatcagacaatttgaatcgaacaaatacctaaatgaaacaagaaagacaaacaacgccgcacaaa 14707724  T
Q  114 gacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
     ||||| ||| |||||||| ||||| |||| |||||||||||    
T  14707723 aacgactaacaaaccaacgccacactaagatgacgaaatcac 14707682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 6 - 137
Target Start/End: Original strand, 10250349 - 10250481
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||| ||||||||||||||| |||||||||| ||||||||||| ||||||||||||||  || ||||| |||||  |||| || ||| ||||||||||     
T  10250349 atgactccaaagtcattgatttgatctgcactcgatcgaagctgttctgacaatctgaacggaacaaattcctgaacgaaataaaaaagacaaacaacgc 10250448  T
Q  106 cgcacaaagacgacgaac-aaccaacgtcacac 137  Q
    | |||||||||||||||| || |||||||||||    
T  10250449 cacacaaagacgacgaacaaaacaacgtcacac 10250481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 154
Target Start/End: Original strand, 13008565 - 13008688
Alignment:
Q  32 tgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaagacgacgaac-aaccaac 130  Q
    ||||| ||||| || ||||| |||||||||||| ||| |||||||||||  |||| |||||| |||||||||| |||||||||||||||||| |||||||    
T  13008565 tgcacgggatcaaacctgatatgacaatctgaaccgaacaaatacctgaacgaaataagaaagacaaacaacgccgcacaaagacgacgaacaaaccaac 13008664  T
Q  131 gtcacacgaagacgacgaaatcac 154  Q
    ||| ||| |||||||| |||||||    
T  13008665 gtcgcactaagacgacaaaatcac 13008688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 13 - 150
Target Start/End: Complemental strand, 44681701 - 44681563
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaa 112  Q
    |||||||||||||||||||| ||| |||||||||||| | ||||||||||||   |  ||||| || |  ||||||||||| |||||||||||| |||||    
T  44681701 caaagtcattgattggatctacaccggatcgaagctggtttgacaatctgaacataataaatatctaaacgaaacaagaaagacaaacaacgtcccacaa 44681602  T
Q  113 agacgacgaac-aaccaacgtcacacgaagacgacgaaa 150  Q
    | ||||||||| ||||||||||||||  |||||||||||    
T  44681601 aaacgacgaacaaaccaacgtcacactgagacgacgaaa 44681563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 24045160 - 24045265
Alignment:
Q  20 attgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaagacgac 119  Q
    |||||||| ||||||||| |||| ||| ||||||||||||||||| ||||||||||| ||||  |||||||||| |||||||| | | ||||||||||||    
T  24045160 attgattgaatctgcactagatctaagttgatctgacaatctgaatcgatcaaatacatgagcaaaacaagaaatacaaacaatgccacacaaagacgac 24045259  T
Q  120 gaacaa 125  Q
    ||||||    
T  24045260 gaacaa 24045265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 21552321 - 21552470
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaag-----aaaaacaaac 100  Q
    |||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||| |||||||| || |     |||||||     ||| ||||||    
T  21552321 atgacgccaaagtcattggttggatctgcagtggatcgaagcggatctgacaatctgaaccgatcaaacactt-----aaacaagagggaaaagacaaac 21552415  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||| || ||||||||| ||| || ||||||| ||| ||||||||||||||||    
T  21552416 aacgtcacataaagacgacaaacgaaacaacgtcgcactaagacgacgaaatcac 21552470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 29804545 - 29804690
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaag-aaaaacaaacaacg 104  Q
    |||| ||||||||||||| |||||||||||  |||||||||||||||||| |||||||| ||| |||| |||||     |||||| ||||| ||||||||    
T  29804545 atgatgccaaagtcattggttggatctgcatcggatcgaagctgatctgataatctgaatcgaacaaacacctg-----aacaagaaaaaaaaaacaacg 29804639  T
Q  105 tcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||| ||| || || |||| ||| | ||||||||||||||    
T  29804640 tcgcacaaagacgacaaacaaaacagcgtcgcactatgacgacgaaatcac 29804690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 46918639 - 46918499
Alignment:
Q  14 aaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaa 113  Q
    |||||||||||||| || |||| |||||| ||||||||||||||||||||| ||| ||||| |||||  ||||||||||  |||||||||  ||||||||    
T  46918639 aaagtcattgattgaatttgcattggatctaagctgatctgacaatctgaaccgaacaaat-cctgaacgaaacaagaatgacaaacaacaccgcacaaa 46918541  T
Q  114 gacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||| ||| |||||| ||  ||| |||| |||||||||||    
T  46918540 gacgacaaacaaaccaatgttgcacaaagatgacgaaatcac 46918499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 8 - 104
Target Start/End: Original strand, 37890357 - 37890453
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacg 104  Q
    ||||| || |||||||| ||||||||||  ||||| ||||||||||||||||||||| ||| ||||||| |||  ||||||||||||||||||||||    
T  37890357 gacgctaatgtcattgactggatctgcagcggatcaaagctgatctgacaatctgaaacgaacaaatacgtgaacgaaacaagaaaaacaaacaacg 37890453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 6 - 122
Target Start/End: Original strand, 41748393 - 41748509
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||| ||||||||||||||| |||||||| | |||||||| ||||||||| ||||||| ||| ||||||||  |   |||||||||| |||||||||||    
T  41748393 atgactccaaagtcattgatttgatctgcatttgatcgaagttgatctgacgatctgaaccgaacaaatacccaaacaaaacaagaaagacaaacaacgt 41748492  T
Q  106 cgcacaaagacgacgaa 122  Q
    ||||| |||||| ||||    
T  41748493 cgcactaagacggcgaa 41748509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 22751666 - 22751567
Alignment:
Q  26 tggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaagacgacgaacaa 125  Q
    |||||||||| ||||||||||||||||||||||||||||  || ||||||  |||  |||||||||||  ||||||||| |||| |||||||||||||||    
T  22751666 tggatctgcattggatcgaagctgatctgacaatctgaactgaacaaatagttgaacgaaacaagaaaggcaaacaacgccgcataaagacgacgaacaa 22751567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 38649231 - 38649372
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| ||| |||| ||||||||||||||||| |||||||||  ||| ||||||| |||  |||| ||||||  ||||||||||||||||    
T  38649231 ccaaagtcattgatttgatatgca-tggatcgaagctgatctaacaatctgat-cgaacaaatacttgaacgaaaaaagaaaggcaaacaacgtcgcaca 38649328  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||| ||| || ||| ||| ||| |||||||||| |||||    
T  38649329 aagacgacaaacaaaacaaggtctcactaagacgacgagatcac 38649372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 33530341 - 33530483
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||||| ||| ||||||| |||   ||||    ||||||   ||| |    
T  33530341 atgacgccaaattcattgattggatttgcactggatctaagctgatttgacaatctgaaccgaacaaatacatgaacaaaac----aaaaca---aactt 33530433  T
Q  106 cgcacaaagacgacgaacaac-caacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||| |||||||  || |||||||| |||||||    
T  33530434 cgcacaaagacgacgaacaacacaacgtcgtactaagacgacaaaatcac 33530483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 2532189 - 2532132
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctga 63  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  2532189 atgacgccaaagtcattggttggatctgcactggatcgaagatgatctgacaatctga 2532132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 43483828 - 43483699
Alignment:
Q  14 aaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaa 113  Q
    ||||||||||||| ||| ||||||||||||| |||||| |||||||||||| ||| ||||            |||||||| |||||||||||||||||||    
T  43483828 aaagtcattgatttgatatgcactggatcgatgctgatttgacaatctgaaccgaacaaa------------acaagaaagacaaacaacgtcgcacaaa 43483741  T
Q  114 gacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||| || ||||||| ||| |||||| |||||||||    
T  43483740 gacgacgaacaaaacaacgtcgcactaagacggcgaaatcac 43483699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 21329167 - 21329311
Alignment:
Q  9 acgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgc 108  Q
    ||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||  || |||| |||||| | |||  | ||| ||||||||| ||||    
T  21329167 acgccaaagtcattggttggatctgcactagatcgaagttgatctgacaatctgaattgaacaaacacctga-acaaagga-aaagacaaacaacatcgc 21329264  T
Q  109 acaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||| |||| ||| || ||  ||||||| |||| |||||||||||    
T  21329265 acaaagtcgacaaacaaaacagggtcacactaagaagacgaaatcac 21329311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 122
Target Start/End: Complemental strand, 36350414 - 36350300
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    |||||||||| ||||||||||||| |||||| ||| |||||||| ||||||||| |  ||| |||||| ||||   |||||| ||| ||||||||||||     
T  36350414 gacgccaaagccattgattggatccgcactgaatcaaagctgatatgacaatctaagtcgaacaaatatctgaaccaaacaaaaaagacaaacaacgtca 36350315  T
Q  108 cacaaagacgacgaa 122  Q
    ||| |||||||||||    
T  36350314 cactaagacgacgaa 36350300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 306 - 384
Target Start/End: Complemental strand, 41373598 - 41373520
Alignment:
Q  306 attttacaattaagcaacaaatatgatcctgaaataaataaaatgcagaagatataaatgtatcttagcgccaagttcc 384  Q
    ||||| |||| |||||||||||||||| |||||||||||||||| |||||||| |||||||| |||||| || ||||||    
T  41373598 attttccaatcaagcaacaaatatgatactgaaataaataaaatacagaagatgtaaatgtaccttagcacctagttcc 41373520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 45949547 - 45949598
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaat 59  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  45949547 gacgccaaagtcattgattggatctgcacttgatcgaagctgatatgacaat 45949598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 34893351 - 34893240
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||| ||| ||||||||||||||| ||||||||||||||| |||||   | |||||||||    ||||||||||| ||||||||  | | |||    
T  34893351 ccaaagtcattaatttgatctgcactggatcaaagctgatctgacaaactgaatgaaacaaatacct--acgaaacaagaaagacaaacaagattgtaca 34893254  T
Q  112 aagacgacgaacaa 125  Q
    ||||||||||||||    
T  34893253 aagacgacgaacaa 34893240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 23177444 - 23177598
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||||| ||||||| ||| |  ||   |||||||||||| || |||| |||| | | |||||||||||   |||||||||| ||| ||    
T  23177444 cgtggatgacgccaaagtgattgatttgatttataccatatcgaagctgatttggcaatttgaaccaaacaaatacctgaacaaaacaagaaagacagac 23177543  T
Q  101 aacgtcgcacaaagacgacg-aacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||| ||||||||||||||| || |||||| ||| ||| ||||||  ||||||||    
T  23177544 aacgccgcacaaagacgacgaaaaaaccaaggtcgcactaagacggagaaatcac 23177598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 14734004 - 14734064
Alignment:
Q  95 acaaacaacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||||| ||| || ||||||| ||| ||||||||||||||||    
T  14734004 acaaacaacgtcgcacaaagacgacaaacaaaacaacgtcgcactaagacgacgaaatcac 14734064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 137
Target Start/End: Original strand, 35135058 - 35135181
Alignment:
Q  14 aaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaa 113  Q
    |||||||||||||||||||||||| ||||||||| ||||||| ||| ||||  ||  || | |||||  |||| | |||| ||| |||||| | ||||||    
T  35135058 aaagtcattgattggatctgcacttgatcgaagccgatctgataatttgaactgaataatttcctgaatgaaataggaaagacagacaacgccacacaaa 35135157  T
Q  114 gacgacgaac-aaccaacgtcacac 137  Q
    ||||| |||| ||||||||||||||    
T  35135158 gacga-gaacaaaccaacgtcacac 35135181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 34594388 - 34594537
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaa-acaaacaacg 104  Q
    ||||| |||||||||||| ||||||||||||| ||| ||||||||| ||| ||| ||||  || |||| || ||| | ||   |||||| |||||||| |    
T  34594388 atgacaccaaagtcattggttggatctgcactagattgaagctgatatgataatttgaactgaacaaacacttga-acaagagagaaaagacaaacaatg 34594486  T
Q  105 tcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||| ||| || |||| || ||| ||||||||||| ||||    
T  34594487 tcgcacaaagacgacaaacaaaacaacttcgcactaagacgacgaagtcac 34594537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 32312803 - 32312666
Alignment:
Q  18 tcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaagacg 117  Q
    ||||||||||||| |||||| ||||||||||||| ||||||| |||| | | |||| || |||   | |  ||||| || |||||| | |||||||||||    
T  32312803 tcattgattggatatgcacttgatcgaagctgatatgacaatatgaatcaaacaaacacatgaacaagatgagaaagactaacaacattgcacaaagacg 32312704  T
Q  118 acgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||| || ||||||  ||| ||||||| ||||||||    
T  32312703 acgaacaaaacaacgttgcactaagacgaagaaatcac 32312666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 154
Target Start/End: Original strand, 24350914 - 24350972
Alignment:
Q  96 caaacaacgtcgcacaaagacgacgaacaac-caacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||| ||||||||||||||||    
T  24350914 caaacaacgccgcacaa-gacgacgaacaacacaacgtcgcactaagacgacgaaatcac 24350972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 28476241 - 28476183
Alignment:
Q  96 caaacaacgtcgcacaaagacgacgaacaac-caacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||| ||||||||||||||||    
T  28476241 caaacaacgccgcacaa-gacgacgaacaacacaacgtcgcactaagacgacgaaatcac 28476183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 9934154 - 9934118
Alignment:
Q  17 gtcattgattggatctgcactggatcgaagctgatct 53  Q
    |||||||||| |||||||||| |||||||||||||||    
T  9934154 gtcattgatttgatctgcactagatcgaagctgatct 9934118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 154
Target Start/End: Original strand, 15123923 - 15123995
Alignment:
Q  83 gaaacaagaaaaacaaacaacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||| ||||||||||| ||||||| |||| |||| ||||||||| | || | ||||| ||||||||    
T  15123923 gaaacaagaaagacaaacaacgttgcacaaatacgaagaacaaaccaacgttatactatgacgatgaaatcac 15123995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 218 - 246
Target Start/End: Complemental strand, 49166888 - 49166860
Alignment:
Q  218 ggtttgtgtgacggctcacaggagagaaa 246  Q
    |||||||||||||||||||||||||||||    
T  49166888 ggtttgtgtgacggctcacaggagagaaa 49166860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 134; Significance: 1e-69; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 4070804 - 4070651
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  4070804 cgtggatgacgccaaagtcattgattggatctgcactagatcgaagctgatctgacaatctgaaacgatcaaatacctgagagaaacaagaaaaacaaac 4070705  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||||||    
T  4070704 aacgtcgcacaaagacgacgaacaaccaacgtcgcacgaatacgacgaaatcac 4070651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 28618855 - 28618702
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  28618855 cgtggatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctaaagcgatcaaatacctgagagaaacaagaaaaacaaat 28618756  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  28618755 aacgtcgcacaaagacgatgaacaaccaacgtcgcacgaagacgacgaaatcac 28618702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 29310215 - 29310369
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||  ||||||||||||||||||||||||||||||||||    
T  29310215 cgtggatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgataatttgaactgatcaaatacctgagagaaacaagaaaaacaaac 29310314  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  29310315 aacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcac 29310369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 6887039 - 6887193
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||  ||||||||||||||||||| ||||||||||||||    
T  6887039 cgtggatgacgccaaagtcattgattggatctgcactggatcgaagctaatctaacaatctgaactgatcaaatacctgagagaagcaagaaaaacaaac 6887138  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  6887139 aacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcac 6887193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 4726794 - 4726943
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  4726794 atgacaccaaagtcattgattggatctgcactggattgaagctgatctgacaatctgaaccgatcaaatacctgagagaaacaagaaagacaaacaacgt 4726893  T
Q  106 cgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||||||| ||||||| || ||||||||||||||||||||    
T  4726894 cgcacaaagacgacgaactaaccaacatcgcacgaagacgacgaaatcac 4726943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 31646082 - 31645928
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||| |||||||||    
T  31646082 cgtggatgacaccaaagtcattgattggatctgcactggatcgaagttgatctgacaatctgaactgatcaaatacctgagagaaacaaggaaaacaaac 31645983  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||    
T  31645982 aacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgaagaaatcac 31645928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 9034808 - 9034957
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||| |||| ||    
T  9034808 atgaccccaaagtcattgattggatctgcactagatcgaaactgatctgacaatctgaaccgatcaaatacctgagagaaacaagaaagacagacaatgt 9034907  T
Q  106 cgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||| |||| |||||||||| ||||||||||| ||||||||    
T  9034908 cgcacaaagacgaggaacaaaccaacgtcgcacgaagacgatgaaatcac 9034957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 6 - 122
Target Start/End: Complemental strand, 35906517 - 35906401
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||  |||||||||||||||||||||||||||||||||||||||    
T  35906517 atgacgccaaagtcattgattggatctgcactggatcgaagctgatccgataatctgaactgatcaaatacctgagagaaacaagaaaaacaaacaacgt 35906418  T
Q  106 cgcacaaagacgacgaa 122  Q
    |||||||||||||||||    
T  35906417 cgcacaaagacgacgaa 35906401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 18472599 - 18472740
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaa 112  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||| |||||||||||  ||||||||||| ||||||||||||||||||    
T  18472599 caaagtcattgatttgatctgcactggatcgaagttgatctgacaatctgaatcgaacaaatacctgaatgaaacaagaaagacaaacaacgtcgcacaa 18472698  T
Q  113 agacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||| |||||| ||| ||||||| ||||||||||||||||    
T  18472699 agacgaggaacaaacaaagtcacactaagacgacgaaatcac 18472740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 10924003 - 10924148
Alignment:
Q  9 acgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgc 108  Q
    ||||||||||| |||||||||||||||||| || |||| ||||| |||||| |||| |||||||||| |||||||||||||||||||| |||||||||||    
T  10924003 acgccaaagtcgttgattggatctgcactgcattgaagttgatccgacaatttgaaccgatcaaatatctgagagaaacaagaaaaac-aacaacgtcgc 10924101  T
Q  109 acaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  10924102 acaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcac 10924148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 20270956 - 20270813
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| |||||||||||  |||||||||||  ||||||||||||||||    
T  20270956 ccaaagtcattgatttgatctgcactggattgaagctgatctgacaatctgaaccgaacaaatacctgaacgaaacaagaaaggcaaacaacgtcgcaca 20270857  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||| || ||||||| ||| ||||||||||||||||    
T  20270856 aagacgacgaacaaaacaacgtcgcactaagacgacgaaatcac 20270813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 41554729 - 41554586
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||| |||||||||||||||||    
T  41554729 ccaaagtcattgatttgatctgcactggatcgaagctgatctgacaatctgaaccgaacaaatacctgagcgaaacaagaaagacaaacaacgtcgcaca 41554630  T
Q  112 aagacgacgaa-caaccaacgtcacacgaagacgacgaaatcac 154  Q
    | |||||||||  || ||| ||| ||| ||||||||||||||||    
T  41554629 aggacgacgaataaaacaaggtcgcactaagacgacgaaatcac 41554586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 5378555 - 5378401
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||||||||||||| |||||||| ||||||||| |||||| ||||||||||| |||||||| | ||||||||||||||||| |||| |    
T  5378555 cgtggatgacgccaaagtcattgatttgatctgcattggatcgaaactgatccgacaatctgaaccgatcaaacatctgagagaaacaagaaagacaagc 5378456  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    || |||||||||||||||||||| ||||||  || ||||||||||||||||||||    
T  5378455 aatgtcgcacaaagacgacgaacaaaccaatttcgcacgaagacgacgaaatcac 5378401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 22397420 - 22397563
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||| |||||||||||  |||| |||||| |||||||| ||||||||    
T  22397420 ccaaagtcattgatttgatctgcactagatcgaagctgatctgacaatctgaatcgaacaaatacctgaacgaaataagaaagacaaacaatgtcgcaca 22397519  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||| || ||||||| ||| ||||||||||||||||    
T  22397520 aagacgacgaacaaaacaacgtcgcactaagacgacgaaatcac 22397563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 41063269 - 41063411
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaa 112  Q
    |||||||||| |||||||||||||||||||||||||||| | | |||||||| |||||||||| | |||||||| ||||||||||||||||||||| |||    
T  41063269 caaagtcattaattggatctgcactggatcgaagctgatataagaatctgaaccgatcaaatagccgagagaaataagaaaaacaaacaacgtcgctcaa 41063368  T
Q  113 agacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    || |||| ||| ||||||||||| |||||||||||||||||||    
T  41063369 agccgacaaacaaaccaacgtcatacgaagacgacgaaatcac 41063411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 33486441 - 33486584
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    |||||||||||| || |||||||||||||||||||||||| |||||||||||| ||| ||||||| |||  ||||||||||| |||||||||||||||||    
T  33486441 ccaaagtcattggtttgatctgcactggatcgaagctgatttgacaatctgaaccgaacaaatacttgaacgaaacaagaaagacaaacaacgtcgcaca 33486540  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||| || ||| ||| ||| ||||||||||||||||    
T  33486541 aagacgacgaacaaaacaaggtcgcactaagacgacgaaatcac 33486584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 2415640 - 2415499
Alignment:
Q  14 aaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaa 113  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||| || ||||| ||| |||||||| ||||||||||    
T  2415640 aaagtcgttgattgaatctgcactggatcgaagctgatctgacaatctgaaccgaacaaatacctgaaagtaacaaaaaagacaaacaatgtcgcacaaa 2415541  T
Q  114 gacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||| |||||| |||||||||| || ||||||||| |||||||    
T  2415540 gacaacgaacaaaccaacgtcgcatgaagacgacaaaatcac 2415499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 6647779 - 6647928
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    |||||||| ||||||||||||||||||||||| |||| ||||||| ||||||||||||| ||| |||||| ||||   |||||||||| ||||||||||     
T  6647779 atgacgccgaagtcattgattggatctgcacttgatctaagctgacctgacaatctgaaccgaacaaatagctgaataaaacaagaaagacaaacaacgc 6647878  T
Q  106 cgcacaaagacgacgaacaac-caacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||| | | || |||| ||| ||||||||||||||||    
T  6647879 cgcacaaagacgacgaatagcacatcgtcgcactaagacgacgaaatcac 6647928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 19645902 - 19646026
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||| | | ||||||| | | |||||||||||| ||||||    
T  19645902 cgtggatgacaccaaagtcattgattggatctgcacttgatcgaatctgatctgacaatctgaatctaacaaatacttcaaagaaacaagaaagacaaac 19646001  T
Q  101 aacgtcgcacaaagacgacgaacaa 125  Q
    |||||| |||||||||||| |||||    
T  19646002 aacgtcacacaaagacgacaaacaa 19646026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 40775003 - 40774859
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaa-acaacgtcgcac 110  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||| |||||||||||  ||||||||||| |||| |||| || ||||    
T  40775003 ccaaagtcattgatttgatctacactggatcgaagctgatctgacaatctgaaccgaacaaatacctgaacgaaacaagaaagacaatacaaggttgcac 40774904  T
Q  111 aaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||| || || ||||||| ||| |||||||| |||||||    
T  40774903 aaagacgacggacaaaacaacgtcgcactaagacgacaaaatcac 40774859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 14 - 154
Target Start/End: Original strand, 8812026 - 8812166
Alignment:
Q  14 aaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaa 113  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||||| ||   |||||||||| ||||||||| || ||||||    
T  8812026 aaagtcattgatttgatctgcactggaccgaagctgatctgacaatctgaaccgaacaaatacccgaacaaaacaagaaagacaaacaac-tcccacaaa 8812124  T
Q  114 gacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||| || ||||||| ||| |||||| |||||||||    
T  8812125 gacgacgaacaaaacaacgtcgcactaagacggcgaaatcac 8812166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 12 - 124
Target Start/End: Complemental strand, 34844158 - 34844046
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||  ||||||| ||| ||||||||||||| | |    
T  34844158 ccaaagtcattgatttgatctgcactggatcgaagctgatctgacaatctgaatcgagcaaatacctgaacgaaacaaaaaagacaaacaacgtcgtata 34844059  T
Q  112 aagacgacgaaca 124  Q
    |||| ||| ||||    
T  34844058 aagatgacaaaca 34844046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 34893822 - 34893923
Alignment:
Q  18 tcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaagacg 117  Q
    |||||||||| || ||||||||| ||||| | |||||||||| |||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  34893822 tcattgattgaatttgcactggaacgaagttaatctgacaatatgaaccgatcaaatagctgagggaaacaagaaaaacaaacaacgtcgcacaaagacg 34893921  T
Q  118 ac 119  Q
    ||    
T  34893922 ac 34893923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 6 - 153
Target Start/End: Complemental strand, 15710789 - 15710642
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    |||||||||| | ||||||||||||||||||| |||| ||||||||||||||||  ||| ||| |||||||||||  ||||||||||| ||||||||||     
T  15710789 atgacgccaa-gccattgattggatctgcactagatctaagctgatctgacaattcgaaccgaacaaatacctgaacgaaacaagaaagacaaacaacgc 15710691  T
Q  106 cgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatca 153  Q
    | ||||||||| |||||| || ||||||| ||| |||| ||| ||||||    
T  15710690 cacacaaagacaacgaacgaaacaacgtcgcactaagatgacaaaatca 15710642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 13007939 - 13007791
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||||| ||||||| ||||||||| ||| ||||||  |||||||| ||| ||| |||  ||| |||||||||||| ||| ||||||| |||||||||||    
T  13007939 atgacgcaaaagtcaatgattggatatgccctggatttaagctgatatgataatttgatccgaacaaatacctgagcgaa-caagaaagacaaacaacgt 13007841  T
Q  106 cgcacaaagacgacgaa-caaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||||||  || ||||||  ||| ||||||||||||||||    
T  13007840 cgcacaaagacgacgaataaaacaacgttgcactaagacgacgaaatcac 13007791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 34874107 - 34873960
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    ||||||||||||||| |||||||||||||| |||||||| |||| ||||||| |||| ||   ||||| |||| |||||||||||| |||||||||| |     
T  34874107 gacgccaaagtcattcattggatctgcactagatcgaagttgatatgacaatttgaatcggataaatatctgaaagaaacaagaaagacaaacaacgcca 34874008  T
Q  108 cacaaagacgacgaa-caaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||| ||||||  || |||| || ||  ||||||||||||||||    
T  34874007 cacaaagatgacgaataaaacaacatcgcattaagacgacgaaatcac 34873960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 32387705 - 32387601
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaa 112  Q
    |||| |||||||||||||||||||| ||||||||||| ||||||||| |||| ||| |||||||||||   ||||||||||  ||||||||| |||||||    
T  32387705 caaaatcattgattggatctgcactagatcgaagctggtctgacaat-tgaatcgaacaaatacctgaataaaacaagaaaggcaaacaacgccgcacaa 32387607  T
Q  113 agacga 118  Q
    ||||||    
T  32387606 agacga 32387601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 6074602 - 6074721
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaa-acaaacaacg 104  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||| |||| || ||| | ||    ||||| |||||||| |    
T  6074602 atgacgccaaagtcattgattggatctacactggatcgaagttgatctgacaatctgaaccgaacaaacacttga-acaagagggaaaagacaaacaagg 6074700  T
Q  105 tcgcacaaagacgacgaacaa 125  Q
    ||||||||||||||| |||||    
T  6074701 tcgcacaaagacgacaaacaa 6074721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 28500935 - 28500825
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    |||| ||||||||||||||||||| | |||||||||||| |||| |||||||||||| ||| |||||||| ||  |||| |||||| |||||||| | ||    
T  28500935 gacgacaaagtcattgattggatccgtactggatcgaagttgatatgacaatctgaaccgaacaaatacccgaacgaaataagaaagacaaacaatgccg 28500836  T
Q  108 cacaaagacga 118  Q
    ||| |||||||    
T  28500835 cactaagacga 28500825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 13079392 - 13079244
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||||| ||||||| ||||||||| ||| ||||||  |||||||| ||| ||| |||  ||| |||||||||||  ||| ||||||| |||||||| ||    
T  13079392 atgacgcaaaagtcaatgattggatatgccctggatttaagctgatatgataatttgatccgaacaaatacctgaacgaa-caagaaagacaaacaatgt 13079294  T
Q  106 cgcacaaagacgacgaa-caaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||||||  || ||||||  ||| ||||||||||||||||    
T  13079293 cgcacaaagacgacgaataaaacaacgttgcactaagacgacgaaatcac 13079244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 6 - 125
Target Start/End: Complemental strand, 8957454 - 8957335
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaa-acaaacaacg 104  Q
    ||||||| |||||||||| ||| ||||||| ||||||||||||||||||||||||||||  || |||| |||||| | ||   |||||| ||||||||||    
T  8957454 atgacgcaaaagtcattggttgaatctgcattggatcgaagctgatctgacaatctgaactgaacaaacacctga-acaagagagaaaagacaaacaacg 8957356  T
Q  105 tcgcacaaagacgacgaacaa 125  Q
    |||||||||||| || |||||    
T  8957355 tcgcacaaagacaacaaacaa 8957335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 20146085 - 20146231
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||   || ||| |||| ||||||   | |   |||| ||||||||||     
T  20146085 atgacgccaaagtcattgattggatctgcactagatcgaagctgatctaacaat---aaccgaacaaacacctgaacaagaggggaaagacaaacaacgc 20146181  T
Q  106 cgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    || ||||||||||| ||| || ||||||| ||| |||||||| |||||||    
T  20146182 cgtacaaagacgacaaacaaaacaacgtcgcactaagacgacaaaatcac 20146231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 154
Target Start/End: Original strand, 32390515 - 32390662
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    |||| |||| ||||| ||| ||||| |||| ||| |||||| |||||| ||| |||| ||| |||||||| ||  ||||||||||| |||||||||| ||    
T  32390515 gacgacaaaatcattaattagatctacactagattgaagctaatctgataatttgaaccgaacaaatacccgaatgaaacaagaaagacaaacaacgccg 32390614  T
Q  108 cacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||| || ||| |||||||||| ||| || | |||||||||||    
T  32390615 cacaaagacaacaaacgaaccaacgtcgcactaatatgacgaaatcac 32390662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 41988398 - 41988251
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    ||||| ||| |||||||||| |||||||||| || ||||||||| |||||| ||||| | | ||||||| | |  ||||||| ||| |||||||| | ||    
T  41988398 gacgcaaaaatcattgattgaatctgcactgcattgaagctgatatgacaacctgaaacaaacaaatacttaaacgaaacaaaaaagacaaacaaagccg 41988299  T
Q  108 cacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||| ||| || ||||||| ||| |||||||| |||||||    
T  41988298 cacaaagacgacaaacaaaacaacgtcgcactaagacgacaaaatcac 41988251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 40565023 - 40565170
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    |||||||||||||||||| |||||| |||||||||||||| ||||||||||||| |||| | | |||| ||||||   |   |  ||| |||||||||||    
T  40565023 atgacgccaaagtcattggttggatttgcactggatcgaaactgatctgacaatatgaatcaaacaaacacctgaactaggga--aaagacaaacaacgt 40565120  T
Q  106 cgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||| ||| || ||  ||| ||| ||||||||||||||||    
T  40565121 cgcacaaagacgacaaacaaaacatggtcgcactaagacgacgaaatcac 40565170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 26 - 154
Target Start/End: Complemental strand, 34866655 - 34866526
Alignment:
Q  26 tggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaagacgacgaac-a 124  Q
    |||||||||||| |||||||||| || ||||||| |||| ||| |||||| ||||  |||| |||||| | |||| ||| || ||||||||||||||| |    
T  34866655 tggatctgcactagatcgaagcttatatgacaatttgaatcgaacaaatatctgaatgaaaaaagaaagataaactacgccgtacaaagacgacgaacaa 34866556  T
Q  125 accaacgtcacacgaagacgacgaaatcac 154  Q
    |  |||||| ||| ||||||||||||||||    
T  34866555 aataacgtcgcactaagacgacgaaatcac 34866526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 14910549 - 14910661
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaa 112  Q
    |||||||||||||| ||| |||  |||||||||| |||||||||||||| || ||| ||||||| |||  ||||||||||| |||||||| ||  |||||    
T  14910549 caaagtcattgatttgatatgcgatggatcgaagttgatctgacaatctaaaacgaacaaatacatgaacgaaacaagaaagacaaacaatgttacacaa 14910648  T
Q  113 agacgacgaacaa 125  Q
    | ||| |||||||    
T  14910649 atacggcgaacaa 14910661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 12524530 - 12524649
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||| ||||||||||||||||||||| ||||||||| ||| |||||||||||||| ||  |    || ||||||   || |||||||||||||||||||    
T  12524530 atgacaccaaagtcattgattggatctacactggatcaaagttgatctgacaatctaaattggattaacacctgaacaaagcaagaaaaacaaacaacgt 12524629  T
Q  106 cgcacaaagacgacgaacaa 125  Q
    || ||||| ||||| |||||    
T  12524630 cgtacaaaaacgactaacaa 12524649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 37425261 - 37425131
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| ||||| ||||||||| |||||||     |||||| ||  || ||||||||||   ||||||||||  |||||||||||||||||    
T  37425261 ccaaagtcattgatttgatctacactggatcaaagctga-----caatctaaactgaacaaatacctgtacgaaacaagaatgacaaacaacgtcgcaca 37425167  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgac 146  Q
    |||||||| ||| || ||||||| ||| ||||||||    
T  37425166 aagacgacaaacaaaacaacgtcgcacaaagacgac 37425131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 17325528 - 17325602
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctga 80  Q
    |||||| ||||||||||| |||||||||||| |||| |||| ||||||||||||||||| ||| |||| ||||||    
T  17325528 atgacgacaaagtcattggttggatctgcaccggattgaagttgatctgacaatctgaatcgaacaaacacctga 17325602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 49 - 154
Target Start/End: Complemental strand, 41358244 - 41358138
Alignment:
Q  49 gatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacg 147  Q
    |||||||||||||||| ||| ||||||||| |   |||||||||| |||||||||| |||||||| ||||||||| || ||| ||| ||| ||||||||     
T  41358244 gatctgacaatctgaaccgaacaaatacctaattaaaacaagaaagacaaacaacgccgcacaaacacgacgaacaaaacaatgtcgcactaagacgaca 41358145  T
Q  148 aaatcac 154  Q
    |||||||    
T  41358144 aaatcac 41358138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 28388980 - 28389088
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaat-acctgagagaaacaagaaaaacaaacaacgtcgcac 110  Q
    ||||||||||||||| ||||| ||||||||| |||||||| ||||||||||||  || ||||| || ||| |||||||| ||  |||||||||| |||      
T  28388980 ccaaagtcattgatttgatcttcactggatctaagctgatatgacaatctgaactgaacaaatgacttgaaagaaacaaaaatgacaaacaacgccgcgt 28389079  T
Q  111 aaagacgac 119  Q
    |||||||||    
T  28389080 aaagacgac 28389088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 6 - 118
Target Start/End: Complemental strand, 29154468 - 29154356
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||| ||||| ||||| ||||||||||||||| ||||||||  || ||||||||| || ||| ||||| ||| |  |||| |||||| |||| |||| |    
T  29154468 atgacaccaaaatcattaattggatctgcactgaatcgaagcctatttgacaatctaaaccgaacaaatgcctaaacgaaaaaagaaagacaaccaacat 29154369  T
Q  106 cgcacaaagacga 118  Q
    |||||||||||||    
T  29154368 cgcacaaagacga 29154356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 154
Target Start/End: Complemental strand, 13080394 - 13080252
Alignment:
Q  14 aaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg--caca 111  Q
    ||||||| ||||| ||| ||| ||||||  |||||||| ||| ||| |||  ||| |||||||||||  ||| ||||||| |||||||||||||  ||||    
T  13080394 aaagtcaatgattcgatatgccctggatttaagctgatatgataatttgatccgaacaaatacctgaacgaa-caagaaagacaaacaacgtcgcacaca 13080296  T
Q  112 aagacgacgaa-caaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||  || ||||||  ||| ||||||||||||||||    
T  13080295 aagacgacgaataaaacaacgttgcactaagacgacgaaatcac 13080252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 25770852 - 25770796
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaa 64  Q
    |||||||||||||| ||||| ||||||||||||||| | ||||||||||||| ||||    
T  25770852 gacgccaaagtcatcgattgaatctgcactggatcggaactgatctgacaatttgaa 25770796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 2979384 - 2979441
Alignment:
Q  97 aaacaacgtcgcacaaagacgacgaacaac-caacgtcacacgaagacgacgaaatcac 154  Q
    |||||||| ||||||| ||||||||||||| ||||||| ||| ||||||||||||||||    
T  2979384 aaacaacgccgcacaa-gacgacgaacaacacaacgtcgcactaagacgacgaaatcac 2979441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 154
Target Start/End: Complemental strand, 37425153 - 37425095
Alignment:
Q  97 aaacaacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| ||| || ||||||| ||| |||||||| |||||||    
T  37425153 aaacaacgtcgcacaaagacgacaaacaaaacaacgtcgcacaaagacgacaaaatcac 37425095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 8e-68; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 23067709 - 23067863
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  23067709 cgtggatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaaccgatcaaatacctgagagaaacaagaaagacaaac 23067808  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  23067809 aacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcac 23067863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 30469984 - 30470132
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30469984 cgtggatgacgccaaagtcattgattggatctgcactagatcgaagctgatctgacaatctgaagcgatcaaacacctgagagaaacaagaaaaacaaac 30470083  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaa 149  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  30470084 aacgtcgcacaaagacgacaaacaaccaacgtcgcacgaagacgacgaa 30470132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 4634536 - 4634382
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  4634536 cgtggatgacaccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaactgatcaaatacctgagagaaacaagaaaaacaaac 4634437  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  4634436 aacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcac 4634382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 46716755 - 46716909
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  46716755 cgtggatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaaccgatcaaatacctgagagaaacaagaaagacaaac 46716854  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  46716855 aacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagatgacgaaatcac 46716909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 9662106 - 9661952
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||    
T  9662106 cgtggatgacgccaaagtcattgattgcatctgcactggatcgaagctgatctaacaatctgaactgatcaaatacctgagagaaacaagaaaaacaaac 9662007  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  9662006 aacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcac 9661952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 14542385 - 14542527
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  14542385 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaactgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaa 14542484  T
Q  113 agacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  14542485 agacgacgaacaaaccaacgtcgcacgaagacgacgaaatcac 14542527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 32189232 - 32189079
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||    
T  32189232 cgtggatgacgccaaagtcattgattggatctgcactgg-tcgaagctgatctgacaatctgaaccaatcaaacacctgagagaaacaagaaaaacaaac 32189134  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  32189133 aacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcac 32189079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 42972291 - 42972141
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| | |||     
T  42972291 cgtggatgacgtcaaagtcattgattggatctgcactggatcgaagttgatctgacaatctgaaccgatcaaatacctgagagaaacaagaaagaaaaat 42972192  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaa 150  Q
    ||||||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  42972191 aacgtcgcataaagacgacgaacaaaccaacgtcgcacgaagacgacgaaa 42972141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 9474405 - 9474554
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    |||||| |||||||||||||||||||| ||||||||||||| ||||| ||||||||||| | ||||||||||| ||||||||||||||||||||||||||    
T  9474405 atgacgtcaaagtcattgattggatctacactggatcgaagttgatcagacaatctgaaccaatcaaatacctaagagaaacaagaaaaacaaacaacgt 9474504  T
Q  106 cgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||||||| |||||||||| |||||| |||||||||||||    
T  9474505 cgcacaaagacgacgaacaaaccaacgtcgcacgaatacgacgaaatcac 9474554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 20961701 - 20961548
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  || || |    
T  20961701 cgtggatgacgtcaaagtcattgattgaatctgcactggatcgaagttgatctgacaatctgaagcgatcaaatacctgagagaaacaagacgaaaaacc 20961602  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||| ||||||| ||||||||||||||||| ||||||||||| ||||||||    
T  20961601 aacgtcgtacaaagatgacgaacaaccaacgtcgcacgaagacgatgaaatcac 20961548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 53903834 - 53903713
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  53903834 cgtggatgacgccaaagtcattgattggatctgcactggatcgaagctgatctggcaatctgaagcgatcaaatacctgagagaaacaggaaaaacaaac 53903735  T
Q  101 aacgtcgcacaaagacgacgaa 122  Q
    ||||||| || |||||||||||    
T  53903734 aacgtcgtacgaagacgacgaa 53903713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 37869278 - 37869432
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||| |||||||||||||||| |||     
T  37869278 cgtggatgacgccaaagtcattgattggatttgcactggatcgaagctgatctgacaatctgaactgatcaaataccttagagaaacaagaaaaataaat 37869377  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||||| || ||| |||||||||| || ||||||||| |||||||    
T  37869378 aacgtcgcacaaagacaacaaacaaaccaacgtcgcaagaagacgacaaaatcac 37869432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 41486828 - 41486674
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||||||||||||||||| ||||||| ||||||||| || |||||||||||| |||||||||| ||||||||||||||||||||||||    
T  41486828 cgtggatgacgccaaagtcattgattggatttgcactgtatcgaagctaatttgacaatctgaaccgatcaaatagctgagagaaacaagaaaaacaaac 41486729  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||| ||||||||||||||||| ||||||| || ||| |||||||| |||||||    
T  41486728 aacgttgcacaaagacgacgaacaaaccaacatcgcacaaagacgacaaaatcac 41486674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 31601217 - 31601373
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaa--atacctgagagaaacaagaaaaacaa 98  Q
    |||| |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||  ||||||||||||||||||||| | ||    
T  31601217 cgtggatgacgtcaaagtcattgattggatctgcactggatcgaagttgatctgacaatctgaaccaatcaaatatacctgagagaaacaagaaagataa 31601316  T
Q  99 acaacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||| |||||||||||||||||||| |||||||||| || |||||||||||||||||    
T  31601317 acaatgtcgcacaaagacgacgaacaaaccaacgtcgcaagaagacgacgaaatcac 31601373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 54420601 - 54420723
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaa-gctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaa 99  Q
    |||| |||||| ||||||||||||||| ||||||||| ||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  54420601 cgtggatgacgtcaaagtcattgattgaatctgcactagatcgaaagttgatctgacaatctgaagcgatcaaatacctcagagaaacaagaaaaacaaa 54420700  T
Q  100 caacgtcgcacaaagacgacgaa 122  Q
    |||||||||||||||||||||||    
T  54420701 caacgtcgcacaaagacgacgaa 54420723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 34115522 - 34115666
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||| |||||||||| |||||     |||||    
T  34115522 atgacgccaaaatcattgattggatctacactggattgaagctgatctgacaatctgaaccgatcaaatacctaagagaaacaaaaaaaa-----aacgt 34115616  T
Q  106 cgcacaaagacgacgaaca-accaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  34115617 cgcacaaagacaacgaacataccaacgtcgcacgaagacgacgaaatcac 34115666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 46728793 - 46728935
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaa 112  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||  |||||||||||  |||||||||||| ||||    
T  46728793 caaagtcattgatttgatctgcactggatcgaagctgatctgacaatctgaaccgaacaaatacctgaacgaaacaagaaaggcaaacaacgtcgtacaa 46728892  T
Q  113 agacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||| || ||| ||| ||| ||||||||||||||||    
T  46728893 agacgacgaacaaaacaaggtcgcactaagacgacgaaatcac 46728935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 50003045 - 50003191
Alignment:
Q  9 acgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgc 108  Q
    ||||||||||| ||||||| || ||||||||||||||||||||||||||||||| |   ||| |||||||||||||||||||||| ||||||| ||||||    
T  50003045 acgccaaagtcgttgattgaatttgcactggatcgaagctgatctgacaatctggactaatctaatacctgagagaaacaagaaagacaaacatcgtcgc 50003144  T
Q  109 acaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||  |||| |||||||||| ||||||||||||||||||||    
T  50003145 acaaagacggtgaacaaaccaacgtcgcacgaagacgacgaaatcac 50003191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 52555606 - 52555714
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||| |||||||||||||| |||||||||||    
T  52555606 atgacgccaaagtcattgattggatctgcactggatcgaagctgatttgacaatctgaaccgattaaatacctaagagaaacaagaaagacaaacaacgt 52555705  T
Q  106 cgcacaaag 114  Q
    || ||||||    
T  52555706 cgtacaaag 52555714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 14346673 - 14346560
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||||||  ||||||||||| |||||||||||||||||    
T  14346673 ccaaagtcattgatttgatttgcactggatcgaagctgatctgacaatctgaatcgagcaaatacctgaacgaaacaagaaagacaaacaacgtcgcaca 14346574  T
Q  112 aagacgacgaacaa 125  Q
    | ||||||||||||    
T  14346573 acgacgacgaacaa 14346560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 29474200 - 29474313
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| ||||||||||||||||||| || |||||||||||||| ||| |||||||||||  |||||||||||| ||||||||||||||||    
T  29474200 ccaaagtcattgatttgatctgcactggatcgaagatggtctgacaatctgaaccgaacaaatacctgaacgaaacaagaaaagcaaacaacgtcgcaca 29474299  T
Q  112 aagacgacgaacaa 125  Q
    ||||||||||||||    
T  29474300 aagacgacgaacaa 29474313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 15729853 - 15729996
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||| ||||||||| ||||||||||||||||||| |||||||||||||||||  || |||||||||||  |||||||||||  ||||||||||||||||    
T  15729853 ccaaaatcattgatttgatctgcactggatcgaagttgatctgacaatctgaactgaacaaatacctgaacgaaacaagaaaggcaaacaacgtcgcaca 15729952  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||| || ||| ||| ||| ||||||||||||||||    
T  15729953 aagacgacgaacaaaacaaggtcgcactaagacgacgaaatcac 15729996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 51646336 - 51646223
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    |||||||||| |||| |||||||||||||||||||||||||||| |||||||| ||| ||||||| |||| ||||||||||| ||||||||| |||||||    
T  51646336 ccaaagtcatcgatttgatctgcactggatcgaagctgatctgataatctgaaccgaacaaatacttgagcgaaacaagaaagacaaacaacatcgcaca 51646237  T
Q  112 aagacgacgaacaa 125  Q
    ||||||||||||||    
T  51646236 aagacgacgaacaa 51646223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 43157019 - 43156875
Alignment:
Q  12 ccaaagtcattgattggatct-gcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcac 110  Q
    ||||||||||||||| ||||| |||||| |||||||||||||| |||||||||| ||| |||||||||||  ||||||||||| ||||||||||||||||    
T  43157019 ccaaagtcattgatttgatcttgcactgaatcgaagctgatctaacaatctgaaccgaacaaatacctgaatgaaacaagaaagacaaacaacgtcgcac 43156920  T
Q  111 aaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||| |||||||| || ||||||  ||| ||||||||||||||||    
T  43156919 aaagtcgacgaacaaaacaacgttgcactaagacgacgaaatcac 43156875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 38434841 - 38434698
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    |||||||||||||||  |||||||||||||||||||||||||   ||||||||  || |||||||||||  ||||||||||| ||||||||||||| |||    
T  38434841 ccaaagtcattgattttatctgcactggatcgaagctgatctagtaatctgaattgaacaaatacctgaacgaaacaagaaagacaaacaacgtcggaca 38434742  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||| || ||||||| ||| ||||||||||||||||    
T  38434741 aagacgacgaacaaaacaacgtcgcactaagacgacgaaatcac 38434698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 3169674 - 3169553
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||||| |||||||||||||| ||||||||||||| ||||||||||||||||| |||| ||| |||||| ||||  ||||||||||| ||||||||||     
T  3169674 atgacgcgaaagtcattgattgaatctgcactggattgaagctgatctgacaatttgaaccgaacaaatatctgaacgaaacaagaaagacaaacaacgc 3169575  T
Q  106 cgcacaaagacgacgaacaacc 127  Q
    ||||||||||| ||||||||||    
T  3169574 cgcacaaagacaacgaacaacc 3169553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 46775723 - 46775871
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    |||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||| |||  ||| ||| ||| ||||||||||     
T  46775723 atgacgtcaaattcattgattggatctgcactagatcgaagctgatctgacaatctgaatcgaacaaatacatgaacgaagcaaaaaagacaaacaacgc 46775822  T
Q  106 cgcacaaagacgacgaa-caaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||| ||||||||  || ||||||||||| ||||||||||||||||    
T  46775823 cgcacaaa-acgacgaattaaacaacgtcacactaagacgacgaaatcac 46775871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 12519902 - 12519755
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    ||||| || ||||||||||||||||||||| |||||||| |||||||||||| |||| | | |||||||||||  || |||||||| |||| |||| |||    
T  12519902 gacgctaatgtcattgattggatctgcactagatcgaagttgatctgacaatttgaaccaaacaaatacctgaacgatacaagaaagacaatcaacttcg 12519803  T
Q  108 cacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||| ||||||||| |||||||||| ||| ||||||||||||||||    
T  12519802 cacaaatacgacgaacaaaccaacgtcgcactaagacgacgaaatcac 12519755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 30416459 - 30416603
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||| ||||||||  |   |||||| ||| | |||||||||    
T  30416459 atgactccaaagtcattgatttgatctgcactggatcaaagctgatctgacaatctgaaccgaacaaatacccaaacaaaacaaaaaagagaaacaacgt 30416558  T
Q  106 cgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaa 149  Q
    ||| |||||||||||||| || ||||||| ||| |||||||||||    
T  30416559 cgcgcaaagacgacgaacaaaacaacgtcgcacaaagacgacgaa 30416603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 32 - 125
Target Start/End: Complemental strand, 40859896 - 40859803
Alignment:
Q  32 tgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaagacgacgaacaa 125  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||| ||   |||||||||| |||||||||||||||||||||||||||||||    
T  40859896 tgcactggatcgaagctgatctgacaatctgaaccgaacaaatacccgaacaaaacaagaaagacaaacaacgtcgcacaaagacgacgaacaa 40859803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 6789742 - 6789861
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    |||| ||||||||||||||||||||||||   |||||||||||||||||||| ||||||  || ||||||||| |  ||||||||||| |||||||| |     
T  6789742 atgatgccaaagtcattgattggatctgcgtaggatcgaagctgatctgacattctgaattgaacaaataccttaacgaaacaagaaagacaaacaatgg 6789841  T
Q  106 cgcacaaagacgacgaacaa 125  Q
    ||||||||||||||||||||    
T  6789842 cgcacaaagacgacgaacaa 6789861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 13 - 119
Target Start/End: Complemental strand, 1125182 - 1125076
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaa 112  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||| |||| | | |||||||||||  ||||||||||| |||| |||||||||| ||    
T  1125182 caaaatcattgatttgatctgcactggatcgaagctgatctgacaatttgaaccaaacaaatacctgaacgaaacaagaaagacaatcaacgtcgcaaaa 1125083  T
Q  113 agacgac 119  Q
    |||||||    
T  1125082 agacgac 1125076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 16992113 - 16991988
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaa 112  Q
    |||||||||||||| ||| |||||||||||||||||||||||| |||||||| |||   |||||||||   ||||||||||  |||||||||||||||||    
T  16992113 caaagtcattgatttgatatgcactggatcgaagctgatctgataatctgaaccgaaagaatacctgaacaaaacaagaaaggcaaacaacgtcgcacaa 16992014  T
Q  113 agacgacgaac-aaccaacgtcacac 137  Q
    ||||||| ||| || |||||||||||    
T  16992013 agacgacaaacaaaacaacgtcacac 16991988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 12 - 125
Target Start/End: Original strand, 26576375 - 26576487
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| |||||||||| ||||||||||||| |||||||||||| ||| |||||||||||  |||||| |||| |||||||| ||||||||    
T  26576375 ccaaagtcattgatttgatctgcactagatcgaagctgatttgacaatctgaatcgaacaaatacctgaacgaaacaggaaagacaaacaa-gtcgcaca 26576473  T
Q  112 aagacgacgaacaa 125  Q
    | |||||| |||||    
T  26576474 acgacgacaaacaa 26576487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 151
Target Start/End: Original strand, 29589233 - 29589373
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||| | ||||||||||||||||||| |||||  ||||||||||  || |||||||||||  ||||||||||  |||||||| ||||||||    
T  29589233 ccaaagtcattgagttgatctgcactggatcgaagttgatcaaacaatctgaaatgaacaaatacctgaacgaaacaagaatgacaaacaaggtcgcaca 29589332  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaat 151  Q
    ||||| || ||| || ||||||| ||| |||||||||||||    
T  29589333 aagacaacaaacaaaacaacgtcgcactaagacgacgaaat 29589373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 37 - 154
Target Start/End: Original strand, 44375161 - 44375279
Alignment:
Q  37 tggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaagacgacgaac-aaccaacgtcac 135  Q
    |||||||| |||||||| |||||||||| | || ||||| |||||||||| || ||| ||||| ||||||||||| ||||||||||| ||| |||||| |    
T  44375161 tggatcgaggctgatctaacaatctgaaccaattaaatatctgagagaaataaaaaagacaaataacgtcgcacacagacgacgaacaaacgaacgtcgc 44375260  T
Q  136 acgaagacgacgaaatcac 154  Q
    |||||||||||||||||||    
T  44375261 acgaagacgacgaaatcac 44375279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 7242637 - 7242754
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    ||||||||||||||| ||||||||||  || |||| ||| || |||||||||||||| ||| ||||||| |||  |||| |||||| ||||||||| |||    
T  7242637 gacgccaaagtcatttattggatctggcctagatcaaagttggtctgacaatctgaaccgaacaaatacttgaacgaaataagaaagacaaacaacttcg 7242736  T
Q  108 cacaaagacgacgaacaa 125  Q
    ||||||||||||||||||    
T  7242737 cacaaagacgacgaacaa 7242754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 8 - 152
Target Start/End: Complemental strand, 28990544 - 28990399
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    |||| |||| ||||||||||||| |||||| |||||||||| |||||||||||||||  || ||||| |||||  ||||||||||| ||| |||||  ||    
T  28990544 gacgtcaaaatcattgattggatatgcactagatcgaagctaatctgacaatctgaacggaacaaatgcctgaacgaaacaagaaagacagacaacaccg 28990445  T
Q  108 cacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatc 152  Q
    ||||||||| |||||| |||||||||| ||| | |||||| |||||    
T  28990444 cacaaagacaacgaacaaaccaacgtcgcactatgacgacaaaatc 28990399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 9 - 125
Target Start/End: Original strand, 46386643 - 46386759
Alignment:
Q  9 acgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgc 108  Q
    ||||||||||||||||||||||| ||||| |||||||| |||| ||||||| ||||  || ||||||||| |  |||||||||||||||||||| | |||    
T  46386643 acgccaaagtcattgattggatcagcactagatcgaagttgatatgacaatttgaacagaacaaatacctaaacgaaacaagaaaaacaaacaatgacgc 46386742  T
Q  109 acaaagacgacgaacaa 125  Q
    ||||| ||| |||||||    
T  46386743 acaaacacggcgaacaa 46386759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 2945383 - 2945236
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    ||||||||||||||||||||  ||| ||||||||||||  ||||||||||||||||| ||| |||||||||||  ||||||| ||| || ||||| | ||    
T  2945383 gacgccaaagtcattgattgtgtcttcactggatcgaaattgatctgacaatctgaaccgaacaaatacctgaacgaaacaaaaaacactaacaatgccg 2945284  T
Q  108 cacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    || | |||||| |||| |||||||||| ||| | ||||| ||||||||    
T  2945283 catacagacgatgaacaaaccaacgtcgcactatgacgatgaaatcac 2945236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 154
Target Start/End: Original strand, 4959442 - 4959588
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    ||||||||||||||||||||||||||||||  ||| |||||||||||||| |  ||| ||| |||||||  ||  ||||||||||| |||||||||||||    
T  4959442 gacgccaaagtcattgattggatctgcacta-atctaagctgatctgacatttcgaaccgaacaaatacaggaacgaaacaagaaagacaaacaacgtcg 4959540  T
Q  108 cacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||| || |||||| || ||| |||  || ||||||||||||||||    
T  4959541 cacaaaaacaacgaacaaaacaatgtcgtactaagacgacgaaatcac 4959588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 29576989 - 29577107
Alignment:
Q  8 gacgccaaagtcatt-gattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtc 106  Q
    ||||||||| ||||| |||||||| ||| ||||||| |||| ||| |||||||||||| ||| |||||||||||  ||||||| ||| |||||||||| |    
T  29576989 gacgccaaaatcatttgattggatatgcgctggatctaagccgatatgacaatctgaaccgaacaaatacctgaacgaaacaaaaaagacaaacaacgcc 29577088  T
Q  107 gcacaaagacgacgaacaa 125  Q
    ||||||||||| |||||||    
T  29577089 gcacaaagacgtcgaacaa 29577107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 1645429 - 1645542
Alignment:
Q  14 aaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaa 113  Q
    |||||||||||||| |||||| || ||| ||| ||||||||||||| |||| | | |||||| ||||  ||||||||||| |||||||||| ||||||||    
T  1645429 aaagtcattgattgaatctgccctagattgaaactgatctgacaatttgaaccaaacaaatatctgaacgaaacaagaaagacaaacaacgccgcacaaa 1645528  T
Q  114 gacgacgaacaacc 127  Q
    ||| ||||||||||    
T  1645529 gacaacgaacaacc 1645542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 38170026 - 38170144
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    |||||||||||||||||||||||||| ||||| |||| ||| |||| ||||||||||||  ||  |||||||||| | |||||||||| |||||||||||    
T  38170026 atgacgccaaagtcattgattggatcagcactagatcaaagttgatatgacaatctgaacggaataaatacctga-acaaacaagaaagacaaacaacgt 38170124  T
Q  106 cgcacaaagacgacgaacaa 125  Q
    || |  |||||||| |||||    
T  38170125 cgtaagaagacgacaaacaa 38170144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 6408686 - 6408542
Alignment:
Q  12 ccaaagtcattgattggatctgcac-tggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcac 110  Q
    ||||| ||||||||| ||||| ||| | ||||||||||||| ||||||| ||||  || ||| ||||| |  |||||||| || |||||||| |||||||    
T  6408686 ccaaactcattgatttgatctacacctagatcgaagctgatttgacaatttgaactgaacaattacctaaacgaaacaagtaagacaaacaatgtcgcac 6408587  T
Q  111 aaagacgacgaa-caaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||| ||| ||||||| ||| |||||| |||||||||    
T  6408586 aaagacgacgaaccaaacaacgtcgcaccaagacgtcgaaatcac 6408542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 4622582 - 4622724
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaa 112  Q
    ||||||| ||||||| || |||| ||||||||| |  || |||||||||||| ||| | ||||||||||  |||||||||| ||||||| || | |||||    
T  4622582 caaagtcgttgattgaatttgcattggatcgaaaccaatatgacaatctgaaccgaaccaatacctgagcaaaacaagaaagacaaacagcgccacacaa 4622681  T
Q  113 agacgacgaaca-accaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||| ||||  || ||||| ||| ||||||||||||||||    
T  4622682 agacgacaaacactcccacgtcgcactaagacgacgaaatcac 4622724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 122
Target Start/End: Complemental strand, 9549680 - 9549571
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaa-caacgtcgcaca 111  Q
    |||||| |||||||||||||| ||| ||||||| ||||| |||||||| ||  ||||||||||||| |||||||||||||| ||||| |||||| ||||     
T  9549680 caaagtaattgattggatctgtactagatcgaaactgatatgacaatc-gagccgatcaaataccttagagaaacaagaaagacaaaccaacgtagcacg 9549582  T
Q  112 aagacgacgaa 122  Q
    | |||||||||    
T  9549581 acgacgacgaa 9549571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 33020793 - 33020851
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaa 64  Q
    |||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||    
T  33020793 atgacgccaaagtcattggttggatttgcactggatcgaaactgatctgacaatctgaa 33020851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 1657438 - 1657581
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| ||| ||||||||||||||||| ||||||| ||||||| ||| ||||||||| |   ||||||| || | |||  | |||| | |    
T  1657438 ccaaagtcattgatttgatttgcactggatcgaagctaatctgactatctgaatcgaacaaatacctaaacaaaacaaggaagataaatgatgtcgtata 1657537  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||| ||||||| || ||| ||| ||| ||||||||||||||||    
T  1657538 aagatgacgaacaaaacaatgtcgcactaagacgacgaaatcac 1657581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 36 - 154
Target Start/End: Original strand, 9781704 - 9781821
Alignment:
Q  36 ctggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaagacgacgaacaaccaacgtcac 135  Q
    ||||||||||||| || |||||||||||| ||| |||||||||||   |||||| ||| |||||||||| | |||||| ||| | || ||  ||||||||    
T  9781704 ctggatcgaagctaatatgacaatctgaaccgaacaaatacctgaacaaaacaa-aaagacaaacaacgacccacaaaaacggcaaataaaaaacgtcac 9781802  T
Q  136 acgaagacgacgaaatcac 154  Q
    || ||||||| ||||||||    
T  9781803 actaagacgaagaaatcac 9781821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 5388763 - 5388706
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctga 63  Q
    |||||| ||||||||||| || ||| |||||||||||||| |||||||||||||||||    
T  5388763 atgacgtcaaagtcattggttcgatttgcactggatcgaatctgatctgacaatctga 5388706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 154
Target Start/End: Original strand, 44021449 - 44021586
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    |||| |||||||||| ||||||||||||||| ||| ||| || |||||||||||||| |||          ||  ||||||||||| |||||||| | ||    
T  44021449 gacgtcaaagtcattaattggatctgcactgaatcaaagttgttctgacaatctgaaccga----------gaacgaaacaagaaagacaaacaatgccg 44021538  T
Q  108 cacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |  ||||||||||||| |||||||||||||  |||||||| |||||||    
T  44021539 cttaaagacgacgaacaaaccaacgtcacattaagacgacaaaatcac 44021586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 10665748 - 10665794
Alignment:
Q  19 cattgattggatctgcactggatcgaagctgatctgacaatctgaag 65  Q
    |||||||||||| |||||| |||||||| ||||||||||||||||||    
T  10665748 cattgattggatatgcacttgatcgaagttgatctgacaatctgaag 10665794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 10879893 - 10879939
Alignment:
Q  19 cattgattggatctgcactggatcgaagctgatctgacaatctgaag 65  Q
    |||||||||||| |||||| |||||||| ||||||||||||||||||    
T  10879893 cattgattggatatgcacttgatcgaagttgatctgacaatctgaag 10879939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 38545951 - 38546005
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatc 60  Q
    ||||||| |||||||||||||| || |||||| |||| |||||||||||||||||    
T  38545951 atgacgcaaaagtcattgattgaatttgcacttgatctaagctgatctgacaatc 38546005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 64
Target Start/End: Complemental strand, 29257467 - 29257415
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaa 64  Q
    ||||||||||||||||||| || |||| ||| ||| |||||||||||||||||    
T  29257467 ccaaagtcattgattggatttgtactgtatcaaagttgatctgacaatctgaa 29257415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 35658397 - 35658507
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaa-acaaacaacg 104  Q
    |||||| ||||||||||| ||| ||||||||| |||| || ||||||||||||||| ||  || |||| ||| || | |||  |||||| ||||||||||    
T  35658397 atgacgtcaaagtcattggttgaatctgcacttgatcaaaactgatctgacaatctaaactgaacaaacacc-ga-acaaaagagaaaagacaaacaacg 35658494  T
Q  105 tcgcacaaagacg 117  Q
    |||||||||||||    
T  35658495 tcgcacaaagacg 35658507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 55
Target Start/End: Complemental strand, 11817302 - 11817255
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctga 55  Q
    |||| ||||||||||| ||||||||| ||| |||||||||||||||||    
T  11817302 gacgtcaaagtcattggttggatctgtactagatcgaagctgatctga 11817255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 17219988 - 17219942
Alignment:
Q  19 cattgattggatctgcactggatcgaagctgatctgacaatctgaag 65  Q
    |||||||||||||| |||| |||||||| |||||| |||||||||||    
T  17219988 cattgattggatctacacttgatcgaagttgatctaacaatctgaag 17219942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 22066967 - 22067013
Alignment:
Q  19 cattgattggatctgcactggatcgaagctgatctgacaatctgaag 65  Q
    ||||||||||||||||||| |||||||  |||| |||||||||||||    
T  22066967 cattgattggatctgcacttgatcgaaattgatttgacaatctgaag 22067013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 23926289 - 23926215
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctga 80  Q
    |||| ||||||||||||| ||||||||||| |  |||||||||||| ||| ||| |||| ||| |||| ||||||    
T  23926289 atgatgccaaagtcattggttggatctgcatttaatcgaagctgatatgagaatttgaaccgaacaaacacctga 23926215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 154
Target Start/End: Original strand, 30416578 - 30416636
Alignment:
Q  97 aaacaacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||||||| || ||||||| ||| |||||  |||||||||    
T  30416578 aaacaacgtcgcacaaagacgacgaacaaaacaacgtcgcactaagacagcgaaatcac 30416636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 31311721 - 31311647
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaata 75  Q
    |||| |||||| |||||||||| ||| |||||| |||||||| ||| ||||  ||||||||||| ||| ||||||    
T  31311721 cgtggatgacgacaaagtcattaatttgatctgtactggatcaaagttgataggacaatctgaaccgaacaaata 31311647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 8 - 76
Target Start/End: Original strand, 9526213 - 9526281
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatac 76  Q
    |||||||| |||||| |||  ||||||||||||||||| ||||| ||| ||| |||| ||| |||||||    
T  9526213 gacgccaacgtcatttattatatctgcactggatcgaaactgatatgataatttgaatcgaacaaatac 9526281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 1e-66; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 4564764 - 4564616
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4564764 atgacaccaaagtcattgattgaatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaataagaaaaacaaacaacgt 4564665  T
Q  106 cgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  4564664 cgcacaaagacgactaacaaccaacgtcgcacgaagacgacgaaatcac 4564616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 22344773 - 22344927
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  22344773 cgtggatgacgtcaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaactgatcaaatacctgagagaaacaagaaaaacaaac 22344872  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  22344873 aacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcac 22344927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 21326726 - 21326574
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||    
T  21326726 cgtggatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaaccgatcaaatacctgagaaaaacaagaaagacaaac 21326627  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatc 152  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  21326626 aacgtcgcacaaagacgacgaacaaaccaatgtcacacgaagacgacgaaatc 21326574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 44562615 - 44562764
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||| ||    
T  44562615 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaacctatcaaatacctgagagaaacaagaaagacaaacaatgt 44562714  T
Q  106 cgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  44562715 cgcacaaagacgacgaacaaaccaacgtcgcacgaagatgacgaaatcac 44562764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 16 - 154
Target Start/End: Complemental strand, 23320678 - 23320539
Alignment:
Q  16 agtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaaga 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||| |||||||||||||||    
T  23320678 agtcattgattggatctgcactggatcgaagctgatctgacaatctgaaccgatcaaatacatgagagaaacaagaaagacaaataacgtcgcacaaaga 23320579  T
Q  116 cgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  23320578 cgacgaacaaaccaacgtcacacgaagacgacgaaatcac 23320539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 5832487 - 5832333
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  5832487 cgtggatgacgtcaaagtcattgattagatctgcactggatcgaagctggtctgacaatctgaaccgatcaaatacctgagagaaacaagaaagacaaac 5832388  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||| ||||||||| |||||||||| || |||||||||||||||||    
T  5832387 aacgtcgcacaaatacgacgaacaaaccaacgtcgcaagaagacgacgaaatcac 5832333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 15698451 - 15698299
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||  |||||||||    
T  15698451 cgtggatgacgccaaagtcattgattgaatctgcaccggatcgaagctgatctgacaatctgaaccaatcaaatacctgagagaaacaa-caaaacaaac 15698353  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||| ||||||||| |||||||||||||||||| ||||||||||||||||    
T  15698352 aacgtcgcccaaagacgatgaacaaccaacgtcacacaaagacgacgaaatcac 15698299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 12967593 - 12967747
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  12967593 cgtggatgacaccaaagtcattgattggatatgcactggatcgaagctgatctgacaatctgaaccgatcaaatacctgagagaaacaagaaagacaaac 12967692  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    || |||||||||||||||||||| |||||||||| ||||| || |||| ||||||    
T  12967693 aatgtcgcacaaagacgacgaacaaaccaacgtcgcacgatgatgacggaatcac 12967747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 23257341 - 23257187
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||| ||  ||||||||| | | |||||||||||||||||||||||||||||||||    
T  23257341 cgtggatgacgccaaagtcattgattggatctgcagtggatcgaagctaattagacaatctggaccaatcaaatacctgagagaaacaagaaaaacaaac 23257242  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||| ||||||||    
T  23257241 aacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgatgaaatcac 23257187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 15276307 - 15276465
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaag----aaaaac 96  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    |||||     
T  15276307 cgtggatgacgccaaagtcattgattggatctgcactggatcgaagctgatctcacaatctgaaccgatcaaatacctgagagaaacaagaagaaaaaaa 15276406  T
Q  97 aaacaacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||| ||||||||||||||||||| |||||||||| |||||| |||||||||||||    
T  15276407 aaacaacatcgcacaaagacgacgaacaaaccaacgtcgcacgaaaacgacgaaatcac 15276465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 38646837 - 38646683
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||||||||||||| ||||| |||| |||||||||||||||| ||||||||| || | |||||| |||||||||||||||||||||||    
T  38646837 cgtggatgacgccaaagtcattgatttgatctacactagatcgaagctgatctggcaatctgaaccggttaaatacatgagagaaacaagaaaaacaaac 38646738  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||| |||||||    
T  38646737 aacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacaaaatcac 38646683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 14717131 - 14717252
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  14717131 cgtggatgacgccaatgtcattgattggatctgcactggatcgaatctgatctgacaatctgaaccgatcaaatatctgagagaaacaagaaaaacaaac 14717230  T
Q  101 aacgtcgcacaaagacgacgaa 122  Q
    ||||||||||||||||||||||    
T  14717231 aacgtcgcacaaagacgacgaa 14717252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 6 - 122
Target Start/End: Complemental strand, 45659262 - 45659146
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||    
T  45659262 atgacgtcaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaaccgatcaaatacctaagagaaacaagaaaaacaaccaacgt 45659163  T
Q  106 cgcacaaagacgacgaa 122  Q
    |||||||||||||||||    
T  45659162 cgcacaaagacgacgaa 45659146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 630645 - 630799
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||| |||||||||||||| |||||||||||||||||||||| |||||||||||  | ||||||||||| |||||||||||||||| || |||    
T  630645 cgtggatgacgtcaaagtcattgattagatctgcactggatcgaagctggtctgacaatcttgaccgatcaaatacttgagagaaacaagaaagacgaac 630744  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||||||| || |||||||||||||||||    
T  630745 aacgtcgcacaaagacgacgaacaaaccaacgtcgcaagaagacgacgaaatcac 630799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 6212775 - 6212896
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||    
T  6212775 cgtggatgacgccaaagtcattgattggatctgcacttgatcgaagctgatctgacaacatgaatcgatcaaatacctgagagaaacaagaaaaacaaac 6212874  T
Q  101 aacgtcgcacaaagacgacgaa 122  Q
    || |||||||||||||||||||    
T  6212875 aatgtcgcacaaagacgacgaa 6212896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 28213301 - 28213147
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||| ||||||||||| |||||||||||| ||||||    
T  28213301 cgtggatgacaccaaagtcattgattggatctacactggatcgaatctgatctgacaatctgaaccgaacaaatacctgaaagaaacaagaaagacaaac 28213202  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    || |||||||||||||||||||| ||| |||| | ||| |||||||| |||||||    
T  28213201 aatgtcgcacaaagacgacgaacaaactaacgccgcacaaagacgacaaaatcac 28213147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 36621605 - 36621451
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||| |||||||||||||||||||| ||||||||||| ||| |||| |||||||||||| ||||||||||||||| |||||||||||||||||||    
T  36621605 cgtggatgatgccaaagtcattgattggatttgcactggatcaaagttgatgtgacaatctgaaccgatcaaatacctgaaagaaacaagaaaaacaaac 36621506  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
     | |||||||||||||||| ||| |||||||| | |||||||||||| |||||||    
T  36621505 tatgtcgcacaaagacgacaaacaaaccaacgccgcacgaagacgacaaaatcac 36621451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 38644658 - 38644812
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||| ||| | |||| ||||| ||||||||||||||||| |||||||||||||||||  | |||||||||||||||||||||||||||||||||    
T  38644658 cgtggatgactccacaatcatggattgaatctgcactggatcgaaactgatctgacaatctgagccaatcaaatacctgagagaaacaagaaaaacaaac 38644757  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    || |||||||||||||||||||| |||||| ||| ||||||||||| ||||||||    
T  38644758 aatgtcgcacaaagacgacgaacaaaccaatgtcgcacgaagacgaagaaatcac 38644812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 11121218 - 11121075
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| ||||||| |||   |||||||||| ||||||||||| |||||    
T  11121218 ccaaagtcattgatttgatctgcactggatcgaagctgatctgacaatctgaaccgaacaaatacatgaacaaaacaagaaagacaaacaacgttgcaca 11121119  T
Q  112 aagacgacgaacaac-caacgtcacacgaagacgacgaaatcac 154  Q
    |||| |||||||||| |||| || ||| ||||||||||||||||    
T  11121118 aagatgacgaacaacacaacctcgcactaagacgacgaaatcac 11121075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 27469580 - 27469723
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||| ||  || ||| |||||||  ||||||||||| |||||||||||||||||    
T  27469580 ccaaagccattgatttgatctgcactggatcgaagctgatctgacaatctaaattgaacaattacctgaacgaaacaagaaagacaaacaacgtcgcaca 27469679  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||| |||| || ||||||| ||| ||||||||||||||||    
T  27469680 aagacgatgaacaaaacaacgtcgcactaagacgacgaaatcac 27469723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 154
Target Start/End: Complemental strand, 52839772 - 52839629
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||   || |||||||||||  ||||||||||| |||||||||||| ||||    
T  52839772 ccaaagtcattgatttgatctgcactggatcgaagctgatctgacaatctgagctgaacaaatacctgaacgaaacaagaaagacaaacaacgtctcaca 52839673  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||| ||||||| || ||||||| ||| |||||||| |||||||    
T  52839672 aagatgacgaacaaaacaacgtcgcactaagacgacaaaatcac 52839629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 44513874 - 44513975
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||  ||||||||||| |||||||||||||||||    
T  44513874 ccaaagtcattgatttgatctgcactggatcgaagctgatctgacaatctgaatcgaacaaatacctgaacgaaacaagaaagacaaacaacgtcgcaca 44513973  T
Q  112 aa 113  Q
    ||    
T  44513974 aa 44513975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 49652083 - 49651943
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||          ||||||| ||| |||||||||||||||| |||||||||||    
T  49652083 atgacgccaaagtcattgattggatttgcattggatcgaagctgatctgaa---------cgatcaattacttgagagaaacaagaaagacaaacaacgt 49651993  T
Q  106 cgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    || ||||||||||||||| ||| |||||||||||||||||||||||||||    
T  49651992 cgtacaaagacgacgaacaaacgaacgtcacacgaagacgacgaaatcac 49651943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 13 - 153
Target Start/End: Complemental strand, 26199821 - 26199680
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaa 112  Q
    |||||||||||||| ||| || |||||||||||||||||||||||| ||||| ||| |||||||||||  ||||||||||| | ||||||||||||||||    
T  26199821 caaagtcattgatttgatttgtactggatcgaagctgatctgacaacctgaatcgaacaaatacctgaacgaaacaagaaagataaacaacgtcgcacaa 26199722  T
Q  113 agacgacgaac-aaccaacgtcacacgaagacgacgaaatca 153  Q
    ||||||||||| || ||| ||| ||| ||||||| |||||||    
T  26199721 agacgacgaacaaaacaatgtcgcactaagacgatgaaatca 26199680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 8893539 - 8893392
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    |||| |||||||||||||||||| ||||||||||| |||||||||||| |||||||| ||| |||||||||||   |||||||||| |||||||||| |     
T  8893539 gacgtcaaagtcattgattggatttgcactggatctaagctgatctgaaaatctgaaccgaacaaatacctgaacaaaacaagaaagacaaacaacgcct 8893440  T
Q  108 cacaaagacgacgaacaac-caacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||| |||| ||| |||  || ||||||| ||||||||    
T  8893439 cacaaagacgacgagcaacacaatgtcgtactaagacgatgaaatcac 8893392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 9 - 154
Target Start/End: Original strand, 32539058 - 32539205
Alignment:
Q  9 acgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagc-gatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    |||||||||||||||||||||| ||||||| |||||||| |||||||||||||||| |  | ||||||| ||    |||||| |||||||||||||||||    
T  32539058 acgccaaagtcattgattggatttgcactgaatcgaagcagatctgacaatctgaaccaaaacaaatacatggacaaaacaataaaaacaaacaacgtcg 32539157  T
Q  108 cacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||||| ||||||||||  || |||||||| |||||||    
T  32539158 cacaaagacgacgaacaaaccaacgtcgtactaagacgacaaaatcac 32539205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 33177470 - 33177612
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||| ||||||| |||   |||||| ||| ||||||||||| |||||    
T  33177470 ccaaagtcattgattggatctgcactggatctaagttgatctgacaatctgaaccgaacaaatacatgaacaaaacaa-aaacacaaacaacgttgcaca 33177568  T
Q  112 aagacgacgaacaac-caacgtcacacgaagacgacgaaatcac 154  Q
    |||||| |||||||| ||||||| ||| ||||| | ||||||||    
T  33177569 aagacggcgaacaacacaacgtcgcactaagacaatgaaatcac 33177612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 33703382 - 33703525
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||||||| ||||| ||||||||| || |||||||||||||||||| | | ||||||| |||  ||||||||||| |||||||||||||||||    
T  33703382 ccaaagtcattgatttgatctacactggatcaaacctgatctgacaatctgaatcaaacaaatacgtgaacgaaacaagaaagacaaacaacgtcgcaca 33703481  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||| ||| || ||||| |  || ||||||||||||||||    
T  33703482 aagacgacaaacaaaacaacgccgtactaagacgacgaaatcac 33703525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 84 - 154
Target Start/End: Complemental strand, 1768135 - 1768065
Alignment:
Q  84 aaacaagaaaaacaaacaacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1768135 aaacaagaaaaacaaacaatgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 1768065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 133
Target Start/End: Complemental strand, 10264955 - 10264829
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    |||| |||||| ||||||||||| |||| ||  |||||| ||||||||||||||||| ||| |||||||||||  |||| |||||||||||||||||| |    
T  10264955 gacgtcaaagttattgattggatttgcaatgactcgaagttgatctgacaatctgaatcgaacaaatacctgaacgaaaaaagaaaaacaaacaacgttg 10264856  T
Q  108 cacaaagacgacgaac-aaccaacgtc 133  Q
    |||||||||||||||| ||||||||||    
T  10264855 cacaaagacgacgaacaaaccaacgtc 10264829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 133
Target Start/End: Original strand, 48654907 - 48655035
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    ||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||   | ||||||| |||  ||||||| ||| |||||||||||    
T  48654907 atgacgccaaagtcattgattggatctgcactgaatcgaagctaatatgacaatctgaactaaacaaatacatgaacgaaacaataaagacaaacaacgt 48655006  T
Q  106 cgcacaaagacgacgaac-aaccaacgtc 133  Q
     | ||||||||||||||| ||||||||||    
T  48655007 tgtacaaagacgacgaacaaaccaacgtc 48655035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 12 - 154
Target Start/End: Original strand, 12147920 - 12148063
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    |||||||||||  ||  ||||||||| |||||||| ||||||||||||||||| ||| |||||||||||  ||||||||||| |||||||| || |||||    
T  12147920 ccaaagtcattctttttatctgcactagatcgaagttgatctgacaatctgaatcgaacaaatacctgaacgaaacaagaaagacaaacaatgttgcaca 12148019  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    || || |||||| || ||| ||||||| ||||||||| ||||||    
T  12148020 aaaacaacgaacaaaacaaagtcacactaagacgacggaatcac 12148063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 121
Target Start/End: Original strand, 37684962 - 37685071
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||||||| | | ||||||  |||  ||||||||||| ||||||||||||  |||    
T  37684962 ccaaagtcattaatttaatctgcactggatcgaagctgatctgacaatctgaatcaaacaaatatttgaacgaaacaagaaagacaaacaacgtcataca 37685061  T
Q  112 aagacgacga 121  Q
    ||||||||||    
T  37685062 aagacgacga 37685071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 12 - 121
Target Start/End: Complemental strand, 37700555 - 37700446
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcaca 111  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||||||| | | ||||||  |||  ||||||||||| ||||||||||||  |||    
T  37700555 ccaaagtcattaatttaatctgcactggatcgaagctgatctgacaatctgaatcaaacaaatatttgaacgaaacaagaaagacaaacaacgtcataca 37700456  T
Q  112 aagacgacga 121  Q
    ||||||||||    
T  37700455 aagacgacga 37700446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 47392382 - 47392256
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    ||||||||||||||| ||||||||| ||||||||| |||||||||||| || || || ||| |||||| ||||  ||||||| ||| |||||||||| ||    
T  47392382 gacgccaaagtcatttattggatctacactggatc-aagctgatctgaaaacctaaaccgaacaaatatctgaacgaaacaa-aaagacaaacaacgccg 47392285  T
Q  108 cacaaagacgacgaac-aaccaacgtcac 135  Q
    |||||||||||||||| ||||||||||||    
T  47392284 cacaaagacgacgaacaaaccaacgtcac 47392256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 34566934 - 34566787
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaag--aaaaacaaacaac 103  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||| |||| || |    ||| || |  ||| |||||||||    
T  34566934 atgacgccaaagtcattggttggatctgcactggatcgaaactgatctgacaatctgaatcgaacaaacactt----gaaccagggaaaagacaaacaac 34566839  T
Q  104 gtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||||| ||| || ||  ||| ||| ||||||||||||||||    
T  34566838 gtcgcacaaagacgacaaacaaaacagggtcgcactaagacgacgaaatcac 34566787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 6 - 154
Target Start/End: Complemental strand, 2350870 - 2350721
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaa-acaaacaacg 104  Q
    |||||||||||||||||| |||||| |||||||||| |||||| ||||||||||| ||| ||| |||| |||||| | |||   ||||| ||||||||||    
T  2350870 atgacgccaaagtcattggttggatttgcactggattgaagctaatctgacaatccgaaccgaacaaacacctga-acaaaagggaaaagacaaacaacg 2350772  T
Q  105 tcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||| ||||||| ||| || ||||||| ||| |||||||| |||||||    
T  2350771 tcgcacagagacgaccaacaaaacaacgtcgcactaagacgactaaatcac 2350721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 11 - 125
Target Start/End: Original strand, 22031962 - 22032076
Alignment:
Q  11 gccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcac 110  Q
    |||||||||||||||||||||| |||||||||||| ||| ||||||||| ||||  || |||||||| ||  |||||||||||  ||||||||| | ||     
T  22031962 gccaaagtcattgattggatctacactggatcgaaactggtctgacaatatgaactgaacaaataccggaacgaaacaagaaaggcaaacaacgccacat 22032061  T
Q  111 aaagacgacgaacaa 125  Q
    |||||||||||||||    
T  22032062 aaagacgacgaacaa 22032076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 11 - 154
Target Start/End: Complemental strand, 10877589 - 10877445
Alignment:
Q  11 gccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcac 110  Q
    ||||||||||||||||| ||||||||||||| |||  |||| ||||||| |||| ||| | ||||| | |  ||||||||||| |||||||||| | |||    
T  10877589 gccaaagtcattgattgaatctgcactggattgaaaatgatatgacaatatgaaccgaaccaatacataaatgaaacaagaaagacaaacaacgccacac 10877490  T
Q  111 aaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||| |||||| || ||||||| ||| |||| |||||||||||    
T  10877489 aaagacaacgaacaaaacaacgtcgcactaagatgacgaaatcac 10877445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 13969508 - 13969657
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaa---aacaaacaacg 104  Q
    |||| |||||||||||||||||||||||||||||| |||||||| ||||||| |||| ||| ||||||| |||   |||||| |||   || ||| || |    
T  13969508 gacgtcaaagtcattgattggatctgcactggatctaagctgatttgacaatttgaaccgaacaaatacttgaacaaaacaataaagacaaaaaataatg 13969607  T
Q  105 tcgcacaaagacgacgaacaac-caacgtcacacgaagacgacgaaatca 153  Q
     ||||||||||||||||||| | ||||||| ||| ||||||| |||||||    
T  13969608 ccgcacaaagacgacgaacatcacaacgtcgcactaagacgatgaaatca 13969657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 154
Target Start/End: Complemental strand, 29067294 - 29067148
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    |||||||||| ||||||||| || |||||| ||||||||||||||||| ||| |||| |||  |||||| |||   |||||||||| ||||||||||  |    
T  29067294 gacgccaaag-cattgattgaatttgcacttgatcgaagctgatctgaaaatttgaaccgaataaatacttgaacaaaacaagaaagacaaacaacgctg 29067196  T
Q  108 cacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||||| || ||||||| ||| |||| || ||||||||    
T  29067195 cacaaagacgacgaacaaaacaacgtcgcactaagaagatgaaatcac 29067148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 46589390 - 46589279
Alignment:
Q  12 ccaaagtcattgattggatct-gcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcac 110  Q
    ||||||||||||| | ||| | |||||| || ||| |||||||||||||||||| ||| ||||||| |||| ||||||||||| ||||||| || |||||    
T  46589390 ccaaagtcattgaattgattttgcactgaattgaaactgatctgacaatctgaaccgaacaaatacttgagcgaaacaagaaagacaaacaccgccgcac 46589291  T
Q  111 aaagacgacgaa 122  Q
    ||||||||||||    
T  46589290 aaagacgacgaa 46589279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 900346 - 900226
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||| ||||||||||||||||||| |||||||||| ||| |||| |||||||||||| ||| || ||| |||   ||||||| ||| ||||||    
T  900346 cgtggatgacgtcaaagtcattgattggatccgcactggatcaaagttgatatgacaatctgaaccgaacagatatctggacgaaacaaaaaagacaaac 900247  T
Q  101 aacgtcgcacaaagacgacgaa 122  Q
    || || ||||||||||||||||    
T  900246 aa-gttgcacaaagacgacgaa 900226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 73
Target Start/End: Original strand, 34659509 - 34659574
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaa 73  Q
    |||||||||||||||||||||||||||| |||||| |||||||| |||||||||||| ||| ||||    
T  34659509 gacgccaaagtcattgattggatctgcattggatctaagctgatatgacaatctgaaccgaacaaa 34659574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 40992496 - 40992440
Alignment:
Q  66 cgatcaaatacctgagagaaacaagaaaaacaaacaacgtcgcacaaagacgacgaa 122  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||    
T  40992496 cgatcaaatacctgagagaaacaagaaacacaaacaacgtcgcacgaagatgacgaa 40992440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 92 - 154
Target Start/End: Complemental strand, 52752185 - 52752122
Alignment:
Q  92 aaaacaaacaacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||||||||||||||||||||||| |||||| |||  ||||||||||| |||||||    
T  52752185 aaaacaaacaacgtcgcacaaagacgacgaacaaaccaatgtcgtacgaagacgacaaaatcac 52752122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 37662457 - 37662403
Alignment:
Q  7 tgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatct 61  Q
    |||| |||||||||||| ||||||||||||| ||||||||||||||| |||||||    
T  37662457 tgacaccaaagtcattggttggatctgcactagatcgaagctgatctaacaatct 37662403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 13691629 - 13691743
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    |||||| ||||||||||  |||||| |||||| |||||||| |||| |||||||||||| ||| |||| ||||||     |||||  ||| |||||| ||    
T  13691629 atgacgtcaaagtcattagttggatttgcactagatcgaagatgatttgacaatctgaatcgaacaaacacctga-----acaagggaaaaaaacaatgt 13691723  T
Q  106 cgcacaaagacgacgaacaa 125  Q
    | |||||||||||| |||||    
T  13691724 cacacaaagacgacaaacaa 13691743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 40488341 - 40488412
Alignment:
Q  84 aaacaagaaaaacaaacaacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||| ||| | ||||||||||||||||||| ||| || ||||||| ||| ||||||||||||||||    
T  40488341 aaacaagaaagacagataacgtcgcacaaagacgacaaacaaaacaacgtcgcactaagacgacgaaatcac 40488412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 8224420 - 8224355
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaa 73  Q
    ||||||||||||||| ||| ||| ||||| |||||||| |||||| ||||||||||| ||| ||||    
T  8224420 gacgccaaagtcattaattagatatgcacgggatcgaatctgatcagacaatctgaaccgaacaaa 8224355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 96 - 154
Target Start/End: Complemental strand, 16161853 - 16161795
Alignment:
Q  96 caaacaacgtcgcacaaagacgacgaacaac-caacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||| ||||||| ||||||||||||| ||||||| ||| ||||||||||||||||    
T  16161853 caaacaacgccgcacaa-gacgacgaacaacacaacgtcgcactaagacgacgaaatcac 16161795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 27356619 - 27356677
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaa 64  Q
    ||||| |||||||||||| || ||| || |||| |||||||||||| ||||||||||||    
T  27356619 atgacaccaaagtcattggtttgatatgtactgtatcgaagctgatttgacaatctgaa 27356677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 29938482 - 29938449
Alignment:
Q  9 acgccaaagtcattgattggatctgcactggatc 42  Q
    ||||||||||||||||||||||||||||| ||||    
T  29938482 acgccaaagtcattgattggatctgcacttgatc 29938449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 12064 - 12218
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12064 cgtggatgacgccaaagtcattgattggatctgcactaaatcgaagctgatctgacaatctgaaccgatcaaatacctgagagaaacaagaaaaacaaac 12163  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  12164 aacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcac 12218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 123; Significance: 5e-63; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 5387 - 5541
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||| ||||||    
T  5387 cgtggatgacgccaaagtcattgattggatctgcactggatcgaagctgatatgacaatatgaaccgatcaaatacctgagagaaacaagaaagacaaac 5486  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  5487 aacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcac 5541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 123; Significance: 5e-63; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 244889 - 244735
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  244889 cgtggatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaaccggtcaaatacctgagagaaacaagaaaaacaaac 244790  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||| ||| |||||||||||| |||||||    
T  244789 aacgtcgcacaaagacgacgaacaaaccaaggtcgcacgaagacgacaaaatcac 244735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 988 - 1142
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  988 cgtggatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaaccgatcaaatacctgagagaaacaagaaaaacaaac 1087  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||  ||||| |||||| |||||| ||||||||||||||||||| |||||||||||    
T  1088 aatttcgcaaaaagacaacgaacaaaccaacgtcacacgaagatgacgaaatcac 1142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 36777 - 36628
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| |||||         
T  36777 cgtggatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaactgatcaaatacctgagagaaacaaaaaaaa----- 36683  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  36682 aacgtcgcacaaagacgacgaacaaaccaacgtcgcacgaagacgacgaaatcac 36628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 9519 - 9672
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||| ||| ||| |||||||| ||||||||||| ||||||||     
T  9519 cgtggatgacgccaaagtcattgattgaatctgcactggatcgaagctgatatgataatctaaagtgattaaatacctaagagaaacaaggaaaacaaaa 9618  T
Q  101 aacgtcgcacaaagacgacgaacaaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||| |||||||||||||||||  |||||||||||||||||||    
T  9619 aacgtcgcacaaagaagacgaacaaccaacgtcgtacgaagacgacgaaatcac 9672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 89; Significance: 9e-43; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 11267 - 11127
Alignment:
Q  1 cgtgtatgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaac 100  Q
    |||| |||||| |||||||||||||||||| |||||| |||| |||||||| ||||||||| || |||||||||||||||||||||||||||||||||||    
T  11267 cgtggatgacgtcaaagtcattgattggatatgcactagatccaagctgatttgacaatctaaatcgatcaaatacctgagagaaacaagaaaaacaaac 11168  T
Q  101 aacgtcgcacaaagacgacgaac-aaccaacgtcacacgaa 140  Q
    ||||||||| ||||||| ||||| |||||||||| ||||||    
T  11167 aacgtcgcataaagacggcgaacaaaccaacgtcgcacgaa 11127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 8 - 154
Target Start/End: Original strand, 1009 - 1156
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtcg 107  Q
    ||||| || ||||||||||||||||||||| |||||||| |||||||||||| |||| | | |||||||||||  || |||||||| |||| |||| |||    
T  1009 gacgctaatgtcattgattggatctgcactagatcgaagttgatctgacaatttgaaccaaacaaatacctgaacgatacaagaaagacaatcaacttcg 1108  T
Q  108 cacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||| ||||||||| |||||||||| ||| ||||||||||||||||    
T  1109 cacaaatacgacgaacaaaccaacgtcgcactaagacgacgaaatcac 1156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 13 - 154
Target Start/End: Original strand, 10184 - 10326
Alignment:
Q  13 caaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgaga-gaaacaagaaaaacaaacaacgtcgcaca 111  Q
    |||| ||||||||||||||| || |||||| ||||| |||||||||| |||  | | ||||||||| ||| ||||||||||| |||||||||   |||||    
T  10184 caaaatcattgattggatctccattggatcaaagctaatctgacaatttgatccaaacaaatacct-agacgaaacaagaaagacaaacaacaatgcaca 10282  T
Q  112 aagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||||||||| |||||||||| ||| ||||| || |||||||    
T  10283 aagacgacgaacaaaccaacgtcgcactaagacaaccaaatcac 10326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 6653 - 6800
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgt 105  Q
    |||||||| ||||  |||||||||| | || | |||||||| |||||||||||||| || ||||||||| |||||  ||||||||||| ||||| ||||     
T  6653 atgacgccgaagttgttgattggattttcagttgatcgaagttgatctgacaatctaaaccgatcaaatgcctgaacgaaacaagaaagacaaataacgc 6752  T
Q  106 cgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    |||||  ||||||||||| |||||||||  ||| ||||| || |||||||    
T  6753 cgcac--agacgacgaacaaaccaacgttgcactaagacaacaaaatcac 6800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 11648 - 11757
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaagcgatcaaatacctga--gagaaacaagaaaaacaaacaacgtcgca 109  Q
    ||||| ||||||||| |||||||||||||||||||||||| ||||||||||||  || ||||||| |||  || ||| || ||| ||||| |||||||||    
T  11648 ccaaaatcattgatttgatctgcactggatcgaagctgatttgacaatctgaattgaacaaatacatgaacgaaaaaaaaaaaagacaaataacgtcgca 11747  T
Q  110 caaagacgac 119  Q
    ||||| ||||    
T  11748 caaagtcgac 11757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 137002 - 137073
Alignment:
Q  84 aaacaagaaaaacaaacaacgtcgcacaaagacgacgaac-aaccaacgtcacacgaagacgacgaaatcac 154  Q
    ||||||||||||||||||||||||||||||||||| |||| || |||||||  || ||||||||||||||||    
T  137002 aaacaagaaaaacaaacaacgtcgcacaaagacgatgaacaaaacaacgtcgtactaagacgacgaaatcac 137073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 63
Target Start/End: Original strand, 136946 - 136997
Alignment:
Q  12 ccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctga 63  Q
    |||||||| |||||| |||||||||| |||||||| ||||||||||||||||    
T  136946 ccaaagtcgttgatttgatctgcacttgatcgaagttgatctgacaatctga 136997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 6 - 64
Target Start/End: Original strand, 25378 - 25436
Alignment:
Q  6 atgacgccaaagtcattgattggatctgcactggatcgaagctgatctgacaatctgaa 64  Q
    ||||||||||| |||||| ||||||||||| |||||| ||||| |||||||||||||||    
T  25378 atgacgccaaaatcattggttggatctgcattggatcaaagctaatctgacaatctgaa 25436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1294 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 117
Target Start/End: Complemental strand, 1021 - 917
Alignment:
Q  8 gacgccaaagtcattgattggatctgcactg-gatcgaagctgatctgacaatctgaagcgatcaaatacctgagagaaacaagaaaaacaaacaacgtc 106  Q
    |||| |||||||||||||||||| |||||||  ||||||| |||||||||||||||||     | ||||| ||| |  ||||||||| |||||||||| |    
T  1021 gacgtcaaagtcattgattggatgtgcactgaaatcgaagttgatctgacaatctgaa-----ccaatacgtga-actaacaagaaagacaaacaacgcc 928  T
Q  107 gcacaaagacg 117  Q
    |||||||||||    
T  927 gcacaaagacg 917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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