View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13912_low_35 (Length: 309)

Name: NF13912_low_35
Description: NF13912
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13912_low_35
NF13912_low_35
[»] chr3 (23 HSPs)
chr3 (10-296)||(5458130-5458416)
chr3 (10-296)||(5481606-5481892)
chr3 (10-296)||(8458111-8458397)
chr3 (10-296)||(6853070-6853356)
chr3 (10-296)||(8464550-8464836)
chr3 (10-296)||(10673056-10673342)
chr3 (10-296)||(10678171-10678457)
chr3 (10-296)||(1302363-1302649)
chr3 (10-296)||(4049607-4049893)
chr3 (10-296)||(6858173-6858459)
chr3 (10-296)||(10591413-10591699)
chr3 (10-296)||(31081625-31081911)
chr3 (10-296)||(31076520-31076806)
chr3 (10-296)||(33702718-33703004)
chr3 (10-296)||(4054741-4055027)
chr3 (10-296)||(33703100-33703385)
chr3 (94-296)||(10586384-10586586)
chr3 (11-296)||(29827228-29827509)
chr3 (10-296)||(20890861-20891145)
chr3 (21-279)||(49784305-49784571)
chr3 (10-296)||(3187572-3187856)
chr3 (10-195)||(18024266-18024450)
chr3 (10-100)||(10584976-10585066)
[»] chr8 (11 HSPs)
chr8 (10-296)||(14318733-14319019)
chr8 (10-296)||(26981994-26982280)
chr8 (10-296)||(34108029-34108315)
chr8 (10-296)||(14315029-14315315)
chr8 (10-296)||(26987107-26987393)
chr8 (10-296)||(43956967-43957253)
chr8 (10-296)||(18608746-18609032)
chr8 (10-296)||(25953277-25953563)
chr8 (10-293)||(10341075-10341357)
chr8 (24-296)||(18884864-18885136)
chr8 (10-111)||(18494294-18494395)
[»] chr7 (17 HSPs)
chr7 (10-296)||(12856589-12856875)
chr7 (10-296)||(26050821-26051107)
chr7 (10-296)||(26060180-26060466)
chr7 (10-296)||(26055934-26056220)
chr7 (10-296)||(26065293-26065579)
chr7 (10-296)||(14610164-14610450)
chr7 (10-296)||(12851474-12851760)
chr7 (10-296)||(11056425-11056711)
chr7 (35-296)||(35352434-35352695)
chr7 (10-296)||(4181500-4181785)
chr7 (54-296)||(5436692-5436934)
chr7 (22-295)||(37459971-37460243)
chr7 (156-296)||(14615230-14615370)
chr7 (10-98)||(5440406-5440494)
chr7 (10-98)||(5449416-5449504)
chr7 (106-171)||(12239601-12239666)
chr7 (182-268)||(31892694-31892776)
[»] chr6 (11 HSPs)
chr6 (10-296)||(21275573-21275859)
chr6 (10-296)||(20752236-20752522)
chr6 (10-296)||(24508946-24509232)
chr6 (10-296)||(24509503-24509789)
chr6 (10-296)||(21937370-21937656)
chr6 (10-296)||(21936798-21937084)
chr6 (10-296)||(2887294-2887576)
chr6 (10-296)||(2889016-2889298)
chr6 (21-210)||(11183295-11183484)
chr6 (199-268)||(12909457-12909526)
chr6 (199-296)||(12934536-12934633)
[»] chr5 (13 HSPs)
chr5 (10-296)||(39908758-39909044)
chr5 (10-296)||(9877657-9877943)
chr5 (10-296)||(39903645-39903931)
chr5 (10-296)||(9872542-9872828)
chr5 (10-296)||(13556423-13556709)
chr5 (10-296)||(2022763-2023050)
chr5 (10-296)||(35369009-35369309)
chr5 (14-296)||(25183894-25184174)
chr5 (42-296)||(43378237-43378491)
chr5 (10-236)||(4555512-4555739)
chr5 (232-296)||(4553663-4553727)
chr5 (14-61)||(43540881-43540928)
chr5 (208-236)||(29006660-29006688)
[»] chr4 (20 HSPs)
chr4 (10-296)||(35095828-35096114)
chr4 (10-296)||(35090715-35091001)
chr4 (10-296)||(32429401-32429688)
chr4 (10-296)||(30019968-30020254)
chr4 (22-296)||(18716286-18716563)
chr4 (10-296)||(34279609-34279896)
chr4 (10-296)||(18736959-18737248)
chr4 (10-296)||(18670641-18670926)
chr4 (21-296)||(3424829-3425104)
chr4 (10-293)||(47071212-47071494)
chr4 (74-296)||(3415334-3415556)
chr4 (33-261)||(54859298-54859525)
chr4 (10-197)||(34128355-34128542)
chr4 (107-296)||(14646483-14646672)
chr4 (10-110)||(14643848-14643948)
chr4 (12-68)||(34602065-34602121)
chr4 (250-296)||(34128574-34128620)
chr4 (149-230)||(23920276-23920357)
chr4 (106-167)||(48779841-48779902)
chr4 (122-158)||(46641401-46641437)
[»] chr1 (22 HSPs)
chr1 (10-296)||(28598109-28598395)
chr1 (10-296)||(3465273-3465559)
chr1 (10-296)||(28574097-28574383)
chr1 (33-296)||(13654135-13654398)
chr1 (10-296)||(43358551-43358839)
chr1 (10-296)||(10186697-10186980)
chr1 (21-296)||(1187627-1187903)
chr1 (10-296)||(44524140-44524422)
chr1 (10-295)||(19310626-19310910)
chr1 (35-296)||(16051006-16051267)
chr1 (54-296)||(48366213-48366455)
chr1 (54-296)||(29681391-29681632)
chr1 (10-153)||(3468010-3468153)
chr1 (136-296)||(35624817-35624977)
chr1 (93-279)||(17415386-17415572)
chr1 (145-296)||(21431918-21432070)
chr1 (10-128)||(35626140-35626258)
chr1 (10-98)||(17414654-17414742)
chr1 (10-85)||(21431790-21431865)
chr1 (35-243)||(3696450-3696654)
chr1 (106-173)||(49053867-49053934)
chr1 (203-235)||(49053964-49053996)
[»] chr2 (9 HSPs)
chr2 (10-296)||(14917500-14917786)
chr2 (10-296)||(17720644-17720930)
chr2 (10-296)||(45120186-45120472)
chr2 (10-296)||(42779983-42780270)
chr2 (10-260)||(30283559-30283809)
chr2 (10-296)||(16284236-16284524)
chr2 (141-296)||(39196121-39196276)
chr2 (10-133)||(716230-716353)
chr2 (227-296)||(716161-716230)
[»] scaffold0006 (1 HSPs)
scaffold0006 (33-296)||(143896-144159)
[»] scaffold0223 (2 HSPs)
scaffold0223 (10-208)||(2137-2335)
scaffold0223 (161-296)||(7246-7381)
[»] scaffold0391 (2 HSPs)
scaffold0391 (133-296)||(16407-16570)
scaffold0391 (242-296)||(16312-16366)
[»] scaffold0005 (2 HSPs)
scaffold0005 (107-296)||(170618-170807)
scaffold0005 (10-110)||(173344-173444)
[»] scaffold0756 (1 HSPs)
scaffold0756 (230-296)||(3945-4011)


Alignment Details
Target: chr3 (Bit Score: 279; Significance: 1e-156; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 5458130 - 5458416
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5458130 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 5458229  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5458230 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 5458329  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5458330 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 5458416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 5481606 - 5481892
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5481606 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 5481705  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5481706 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 5481805  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5481806 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 5481892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 8458397 - 8458111
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8458397 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 8458298  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8458297 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 8458198  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8458197 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 8458111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 6853070 - 6853356
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  6853070 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcacgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 6853169  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6853170 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 6853269  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6853270 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 6853356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 8464836 - 8464550
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8464836 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 8464737  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  8464736 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggttgg 8464637  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8464636 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 8464550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 10673056 - 10673342
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10673056 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 10673155  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10673156 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 10673255  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10673256 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 10673342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 10678171 - 10678457
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10678171 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 10678270  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10678271 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 10678370  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10678371 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 10678457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 1302363 - 1302649
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1302363 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 1302462  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1302463 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 1302562  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1302563 ggcgtatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 1302649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 4049893 - 4049607
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4049893 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 4049794  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4049793 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 4049694  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4049693 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaatatttcaggtttcaagtg 4049607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 6858173 - 6858459
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6858173 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 6858272  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6858273 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcttgaaggggatttgccggtcattcctattgcatccaatatacatttattggtggg 6858372  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6858373 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 6858459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 10591413 - 10591699
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10591413 ataattcctcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 10591512  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10591513 cgcttggtgtggttgtgcaatacacgtcaatgaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 10591612  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10591613 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 10591699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 31081625 - 31081911
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31081625 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 31081724  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31081725 cgtttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 31081824  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  31081825 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacattttaggtttcaagtg 31081911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 31076520 - 31076806
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  31076520 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 31076619  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  31076620 cgtttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgtcggtcattcctattgcatccaatatacatttattggtggg 31076719  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31076720 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 31076806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 33702718 - 33703004
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  33702718 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatatgtaaaatactgttaggagata 33702817  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33702818 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccagtcattcctattgcatccaatatacatttattggtggg 33702917  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
     |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33702918 agcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 33703004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 4055027 - 4054741
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4055027 ataattcttcaccattctattattctaaatcatccatcaattctttaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 4054928  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4054927 cgcttggtgtggttgtgcaatacacgttaaggaactcatagtatcctgaaggggattcgtcggtcattcctattgcatccaatatacatttattggtggg 4054828  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  4054827 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacattccaggtttcaagtg 4054741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 33703385 - 33703100
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  33703385 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactattaggagata 33703286  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33703285 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaa-cggattcgccggtcattcctattgcatccaatatacatttattggtggg 33703187  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33703186 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 33703100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 94 - 296
Target Start/End: Original strand, 10586384 - 10586586
Alignment:
Q  94 atactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaata 193  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10586384 atactgttaggagatacgcttggcgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaata 10586483  T
Q  194 tacatttattggtgggggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaa 293  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10586484 tacatttattggtgggggcgaatcgaacctaaaggttagtgtggcaacctcatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaa 10586583  T
Q  294 gtg 296  Q
    |||    
T  10586584 gtg 10586586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 11 - 296
Target Start/End: Complemental strand, 29827509 - 29827228
Alignment:
Q  11 taattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagatac 110  Q
    ||||||| | ||||||| ||| |||||||||| ||||||||||||||||||||||||||||| ||     ||||||||||||||||||||||||||||||    
T  29827509 taattctccctcattctcttactctaaatcattcatcaattctctaatgcatgagtgaattgctg-----ataaatctgtaaaatactgttaggagatac 29827415  T
Q  111 gcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggg 210  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||| |||||||||| |    
T  29827414 ccttggtgtggttgtgcaatacacgtcaaggaactcatagtatcttgaaggggattcgccggtcgctcctattgcatccaatatacaattattggtggag 29827315  T
Q  211 gcgaatcgaacctaaaag-ttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |||||||||||||||| | ||||||||| |||||||| ||||||||||||||||||||| | |||||||| |||||||||| |||||    
T  29827314 gcgaatcgaacctaaaggtttagtgtggtaaccccatgcgctttgagttttacatgcataaccattaaacttttcaggttttaagtg 29827228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 20891145 - 20890861
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||| | ||||||  ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||    
T  20891145 ataattctccctcattcgcttactctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctataaaatactgttaagagata 20891046  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||| ||||| ||||| ||||||| |||||||||||||||||| ||||||||||||| |  ||||||| |||||||||||||||||| |||||||| ||    
T  20891045 cgctttgtgtgattgtgtaatacacatcaaggaactcatagtat-ctgaaggggattcactagtcattcatattgcatccaatatacagttattggt-gg 20890948  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
     ||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||| | |||||||| ||| || ||| |||||    
T  20890947 cgcgaatcaaacttaaaggttagtgtggcaaccccatacgctttgagttttacatgcataaccattaaactttttagatttaaagtg 20890861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 21 - 279
Target Start/End: Complemental strand, 49784571 - 49784305
Alignment:
Q  21 tcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagatacgcttggtgtg 120  Q
    ||||||| ||| | ||||||||| |||||||||||||| ||||||||||||| |||||||||||||||| |||||| |||||||||||| | ||||| ||    
T  49784571 tcattcttttactttaaatcatctatcaattctctaattcatgagtgaattgctggaaccataaatctggaaaatattgttaggagatatgtttggtatg 49784472  T
Q  121 gttgtgcaatacacgtcaaggaactcata--gtatcctgaaggggattcgccggtcattcc-tattgcatccaatatacatttattggt-------gggg 210  Q
    ||||||||||||||||||| |||||||||  ||||| ||||||||||||||| |||||||| |||||||||||||||||| ||||||||       ||||    
T  49784471 gttgtgcaatacacgtcaaagaactcatagtgtatcttgaaggggattcgccagtcattccttattgcatccaatatacagttattggtggggggggggg 49784372  T
Q  211 gcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaac 279  Q
    |||||||||||||||| |||||| || ||||||||| |||||||||  |||||||||| ||||||||||    
T  49784371 gcgaatcgaacctaaatgttagtttgacaaccccatgcgctttgag--ttacatgcataatcattaaac 49784305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 3187572 - 3187856
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||| | ||||||| ||| ||||||||||| ||||||||| |||||||||||||||||| | ||||||||||||||||||||| ||||| ||||||    
T  3187572 ataattctccctcattctcttactctaaatcatctatcaattctttaatgcatgagtgaattgctcgaaccataaatctgtaaaatattgttaagagata 3187671  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    | ||| ||||  ||||||||||||| ||||| ||||||| ||||||| ||||||||||||| |||||||||||||||||||||||| | |||||||  ||    
T  3187672 cactttgtgtaattgtgcaatacacatcaagaaactcat-gtatccttaaggggattcgccagtcattcctattgcatccaatatatagttattgg-cgg 3187769  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
     ||||||||||||| || |||||| || ||||||||||| |||||| |||||| ||||| || ||||||  |||||  |||||||||    
T  3187770 agcgaatcgaaccttaaggttagtatgacaaccccatacactttgacttttacgtgcattattattaaatttttcaaatttcaagtg 3187856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 10 - 195
Target Start/End: Original strand, 18024266 - 18024450
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||| | ||||||| ||| |||||||||| ||||||||||||||||||||| ||||||||| |||| |||||||||||||||| |||||  |||||    
T  18024266 ataattctccctcattctcttactctaaatcattcatcaattctctaatgcatgaatgaattgttagaacaataaatctgtaaaatattgttaacagata 18024365  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatata 195  Q
    ||||||||||| ||||||||||||| | ||  ||||||||||||||||||||  |||||| |||||||||||||||||| ||||||    
T  18024366 cgcttggtgtgattgtgcaatacacat-aaaaaactcatagtatcctgaaggatattcgctggtcattcctattgcatcaaatata 18024450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 100
Target Start/End: Original strand, 10584976 - 10585066
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgt 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||    
T  10584976 ataattcctcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaatagctagaaccataaatctgtaaaatactgt 10585066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 275; Significance: 1e-154; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 14318733 - 14319019
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14318733 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 14318832  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14318833 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 14318932  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14318933 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 14319019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 26981994 - 26982280
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26981994 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 26982093  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26982094 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 26982193  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26982194 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 26982280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 34108315 - 34108029
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34108315 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 34108216  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34108215 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 34108116  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  34108115 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgatttttacatgcatgatcattaaacatttcaggtttcaagtg 34108029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 14315029 - 14315315
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14315029 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 14315128  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14315129 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcatttctattgcatccaatatacatttattggtggg 14315228  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14315229 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 14315315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 26987107 - 26987393
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26987107 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 26987206  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26987207 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 26987306  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26987307 ggcgaatcgaacctaaaggttagtgtggcaaccacatacgctttaagttttacatgcatgatcattaaacatttcaggtttcaagtg 26987393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 43956967 - 43957253
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||| ||||||||||||||    
T  43956967 ataattcttcatcattctcttattctaaatcatccatcaattctctaatgcatgagtgaattgctgaaaccataaatttgtaaaacactgttaggagata 43957066  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43957067 cgcttggtgtggttgtgcaatacacgtcaaagaactcatagaatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 43957166  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  43957167 ggcgaatcgaacctaaaggttagtgtgacaaccccatacgctttgaattttacatgcatgatcattaaacatttcaggtttcaagtg 43957253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 18608746 - 18609032
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||| | ||||||| ||| |||||||||||||||||||||||||||||||||| |||||  ||||| |||||||||||||||||||||||||||||    
T  18608746 ataattctccctcattctcttactctaaatcatccatcaattctctaatgcatgagttaattgacggaacgataaatctgtaaaatactgttaggagata 18608845  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||  | ||||||||||||| ||||||||||||| |||||||||||    
T  18608846 cgcttggtgtggttgtgcaatacacatcaaggaactcatattatcctgaaggggatttactggtcattcctatttcatccaatatacaattattggtggg 18608945  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||| ||||||||| |||||||||||||||||||  |||||||||||||||||||| | ||| |||| ||||||||||||||||    
T  18608946 ggcgaattgaacctaaaggttagtgtggcaaccccatgtgctttgagttttacatgcataaccatcaaacttttcaggtttcaagtg 18609032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 25953277 - 25953563
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||| |||||||||  || ||||||||||||||||||| |||||||||||||||||||| | ||||||||||| |||| |||||||||||||||||    
T  25953277 ataattctccatcattctcatactctaaatcatccatcaattgtctaatgcatgagtgaattgcttgaaccataaatatgtacaatactgttaggagata 25953376  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  25953377 cgctaggtgtggttgtgcaatacacgtcaaggaactcatagtaccctgaaggggattcgccggtcattcctattgcatccattatacagttattggtggg 25953476  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||| || |||| ||||||||||||||||||| | ||||||||||||||||| | | ||| |||| ||||||||||||||||    
T  25953477 ggcgaatcgtacttaaaggttagtgtggcaaccccatgcactttgagttttacatgcttaaccatcaaacttttcaggtttcaagtg 25953563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 10 - 293
Target Start/End: Original strand, 10341075 - 10341357
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||| | ||||||| ||| |||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||    
T  10341075 ataattctccctcattctcttactctaaatcatccataaattctctaatgcatgagtgaattgctggaatcataaatctgtaaaatattgttaggagata 10341174  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||| |||||||||||    
T  10341175 cgcttggtgtagttgtgcaatacacgtcaaggaactcatagtatcatgaaggggattcgccgatcactcctattgcatccaatatacagttattggtggg 10341274  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaa 293  Q
    |||||||||||||| || |||||| |||||| ||||| ||||||||||||||||||||| |||||| ||| ||||| |||||||    
T  10341275 ggcgaatcgaacct-aaggttagtatggcaatcccatgcgctttgagttttacatgcataatcattgaacttttcaagtttcaa 10341357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 24 - 296
Target Start/End: Complemental strand, 18885136 - 18884864
Alignment:
Q  24 ttctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggtt 123  Q
    |||| ||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||| |||||||||| ||    
T  18885136 ttctcttactctaaatcatcaatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatcctgttaagagatatgcttggtgtgatt 18885037  T
Q  124 gtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacct 223  Q
    ||||||||||| |||||||||| | ||||||||||||||| ||| | ||||||||| |||| ||||||| |||| | |||||||||||||||||||||||    
T  18885036 gtgcaatacacatcaaggaacttaaagtatcctgaagggggttcactggtcattcccattgaatccaatctacagtaattggtgggggcgaatcgaacct 18884937  T
Q  224 aaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||| |||||||||||||||||||||| |||||||||||  ||||| | | |||||| |||||| || ||||||    
T  18884936 aaatgttagtgtggcaaccccatacgttttgagttttatgtgcataaccgttaaacttttcagattccaagtg 18884864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 10 - 111
Target Start/End: Original strand, 18494294 - 18494395
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18494294 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 18494393  T
Q  110 cg 111  Q
    ||    
T  18494394 cg 18494395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 275; Significance: 1e-154; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 12856875 - 12856589
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12856875 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 12856776  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12856775 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 12856676  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12856675 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 12856589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 26051107 - 26050821
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26051107 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 26051008  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26051007 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 26050908  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26050907 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 26050821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 26060466 - 26060180
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26060466 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 26060367  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26060366 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 26060267  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26060266 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 26060180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 26056220 - 26055934
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26056220 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 26056121  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26056120 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 26056021  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26056020 ggcgaatcgaacctaaaggttagtgtggcaacctcatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 26055934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 26065579 - 26065293
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  26065579 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 26065480  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26065479 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 26065380  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26065379 ggcgaatcgaacctaaaggttagtgtggcaacctcatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 26065293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 14610450 - 14610164
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14610450 ataattcttcatcattctcttattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 14610351  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  14610350 cgcttggtgtggttgtgcaatacacgtcaagaaactcatagtatcctgaaggggattcgctggtcattcctattgcatccaatatacatttattggtggg 14610251  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14610250 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 14610164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 12851760 - 12851474
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12851760 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 12851661  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  12851660 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgtcggtcattcctattgcatccaatatacatttattggtgtg 12851561  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
      ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12851560 ttcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcagttttcaagtg 12851474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 11056711 - 11056425
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||| |||||||| ||| | ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11056711 ataattctttatcattctcttactttaaatcatccatcaattctttaatgcatgagtgaattgttggaaccataaatctgtaaaatactattaggagata 11056612  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    || |||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||    
T  11056611 cgtttggtgtgattgtgcaacacacgtcaaggaactcatagtatcctgaaggggattcgtcggtcattcatattgcatccaatatacagttattggtggg 11056512  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||  || |||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  11056511 ggcgaatcacacataaaggttagtgtggcaaccccatgcgctttgagttttacatgcataatcattaaacatttcatgtttcaagtg 11056425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 35 - 296
Target Start/End: Original strand, 35352434 - 35352695
Alignment:
Q  35 taaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacac 134  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||| |||| ||||||||||||||||||    
T  35352434 taaaccatccatcaattctctaatgcatgagtgaattgctggaaccataaatctataaaatactgttaggagttactcttgatgtggttgtgcaatacac 35352533  T
Q  135 gtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacctaaaagttagtg 234  Q
     ||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||    
T  35352534 atcatggaactcatagtatcctgaagaggattcgctggtcattcctattgcatccaatatacaattattggtgggggcgaattgaacctaaaggttagtg 35352633  T
Q  235 tggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||| |||||||| ||||||||||||||||||| | | |||||||| || || ||||||||||    
T  35352634 tggtaaccccatgcgctttgagttttacatgcttaaccattaaactttccatgtttcaagtg 35352695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 4181500 - 4181785
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||| | ||||||| ||| |||||||||||||||||||||||||||||||||||| ||| | |||||||||| | ||||||||||||||| |||||    
T  4181500 ataattctccctcattctcttaatctaaatcatccatcaattctctaatgcatgagtga-ttgctcgaaccataaacccgtaaaatactgttagtagata 4181598  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    |||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||| | ||||||||| ||||||||||||||| | |||||||||||    
T  4181599 cgcttgatgtggttgtgcaatacatgtcaaggaactcatagtatcatgaaggggattctctggtcattccaattgcatccaatatagagttattggtggg 4181698  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |  |||||||||||||| ||||||||| |||||||||||||||||| |||||||| ||| | |||||||| ||||| ||||||||||    
T  4181699 gaagaatcgaacctaaaggttagtgtgacaaccccatacgctttgaattttacatacataaccattaaacttttcaagtttcaagtg 4181785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 54 - 296
Target Start/End: Original strand, 5436692 - 5436934
Alignment:
Q  54 ctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtat 153  Q
    ||||||||| ||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  5436692 ctaatgcattagtgaattgcttgaaccataaatctgtaaaatattgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggacctcatagtat 5436791  T
Q  154 cctgaaggggattcgccggtcattcc-tattgcatccaatatacatttattggtgggggcgaatcgaacctaaaagttagtgtggcaaccccatacgctt 252  Q
    ||| ||||| |||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||| ||| || |||||||||||| |||||    
T  5436792 cctcaagggaattcgccggtcattccttattgcatccaatatacagttattggtgggggcaaatcgaacctaaaggttggtatggcaaccccatgcgctt 5436891  T
Q  253 tgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |||| ||||||||||| | ||||| |  ||||| ||||||||||    
T  5436892 tgag-tttacatgcataaccattagatttttcaagtttcaagtg 5436934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 22 - 295
Target Start/End: Original strand, 37459971 - 37460243
Alignment:
Q  22 cattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagatacgcttggtgtgg 121  Q
    |||||| ||| ||||||||||||||||||||||| |||||| || |||||| || ||||||| |||||||||||| ||||| |||||||||||| |||||    
T  37459971 cattctcttactctaaatcatccatcaattctctgatgcattagcgaattgctgaaaccatatatctgtaaaatattgttaagagatacgcttgatgtgg 37460070  T
Q  122 ttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaac 221  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||||||  ||||||||| |||||||||||||||||| ||||||||||||| |||| |||     
T  37460071 ttgtgcaatacacatcaaggaactcatagtatcatgaagtggattcatcggtcattcttattgcatccaatatacagttattggtgggggtgaattgaag 37460170  T
Q  222 ctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagt 295  Q
    ||| | |||||| ||| || ||| | |||||| |||||||||||||| ||||||||| ||||||||||||||||    
T  37460171 ctataggttagtatgggaa-cccgtgcgctttaagttttacatgcataatcattaaaaatttcaggtttcaagt 37460243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 156 - 296
Target Start/End: Complemental strand, 14615370 - 14615230
Alignment:
Q  156 tgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttga 255  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  14615370 tgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacctaaaggttagtgtggaaaccccatacgctttga 14615271  T
Q  256 gttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14615270 gttttacatgcatgatcattaaacatttcaggtttcaagtg 14615230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 5440406 - 5440494
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatact 98  Q
    |||||||| | ||||||  ||| ||||||||||| ||||||||||||| || ||||| ||||| |||||||||| ||||||||||||||    
T  5440406 ataattctccctcattcccttactctaaatcatcgatcaattctctaaagcttgagtaaattgctggaaccatacatctgtaaaatact 5440494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 5449416 - 5449504
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatact 98  Q
    |||||||| | ||||||  ||| ||||||||||| ||||||||||||| || ||||| ||||| |||||||||| ||||||||||||||    
T  5449416 ataattctccctcattcccttactctaaatcatcgatcaattctctaaagcttgagtaaattgctggaaccatacatctgtaaaatact 5449504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 12239666 - 12239601
Alignment:
Q  106 gatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccg 171  Q
    |||||||||||||||  |||||||  |||||||||||  |||| ||||||||||||||||||||||    
T  12239666 gatacgcttggtgtgaatgtgcaagtcacgtcaaggatttcatcgtatcctgaaggggattcgccg 12239601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 268
Target Start/End: Complemental strand, 31892776 - 31892694
Alignment:
Q  182 ttgcatccaatatacatttattggtgggggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcat 268  Q
    |||||||||||||| | |||||||||||| | ||||||||||||   ||||||||| ||   || ||||||||| ||||||||||||    
T  31892776 ttgcatccaatatatacttattggtggggacaaatcgaacctaatgattagtgtggaaa---cacacgctttga-ttttacatgcat 31892694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 275; Significance: 1e-154; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 21275859 - 21275573
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21275859 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 21275760  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21275759 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 21275660  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21275659 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 21275573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 20752236 - 20752522
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| |||||| ||| | ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20752236 ataattcttcaccattctcttactataagtcatccatcaattctctgatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 20752335  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  20752336 cgcttggtgtggttgtgcaatacacgtcaaggaactcgtagtatcctgaaggggattcgccggtcattcctattgcatccaatatacagttatttgtggg 20752435  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||| ||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||||    
T  20752436 ggcgaatcgaacctaaaggttagtatggcaaccccatgtgctttgagttttacatgcataatcattaaacatttcaggtttcaagtg 20752522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 24508946 - 24509232
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  24508946 ataattctccatcattcttttactctaaatcatccatcaattctctaatgcatgagtgaattgttggaatcataaatttgtaaaatactgttaggagata 24509045  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||| | |||||||||||    
T  24509046 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtattatgaaggggattcgccgatcattcctattgcatccaatatatagttattggtggg 24509145  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||| |||||||||||| || |||||||||||||||||| | |||||||| ||| | ||||||||||    
T  24509146 ggcgaatcgaacctaaaggttagtatggcaaccccatgcgttttgagttttacatgcataaccattaaacttttgaagtttcaagtg 24509232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 24509789 - 24509503
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||| ||||||||| ||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  24509789 ataattctccatcattcttttactttaaatcatccatcaattctctaatgcattagtgaattgttggaaccataaatttgtaaaatactgttaggagata 24509690  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||| ||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||| | |||||||||||    
T  24509689 cgcatggtgtggttgtgcaatacacatcaaggaactcatagtattatgaaggggattcgccgatcattcctattgcatccaatatatagttattggtggg 24509590  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||| |||||||||||| || |||||||||||||||||| | |||||||| ||| ||||||||||||    
T  24509589 ggcgaatcgaacctaaaggttagtatggcaaccccatgcgatttgagttttacatgcataaccattaaacttttaaggtttcaagtg 24509503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 21937656 - 21937370
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||| | ||||| ||| |||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||| |||| |||| ||||| ||||||    
T  21937656 ataattttccatcactctcttattctaaaacatccatcaattctcaaatgcatgagtgaattgctggaaccataaatttgtataatattgttacgagata 21937557  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    |||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  21937556 cgcttggtgtggttgtgcaatacacaacaaggaactcatagtatcctaaaggggattcgccggtcattcctattgcatccaatatatggttattggtggg 21937457  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |||||||||| |||||| |||||| ||| |||||||| |||||||||||||| |||||| | |||||||| ||||||||||||||||    
T  21937456 ggcgaatcgagcctaaaggttagtatggaaaccccatgcgctttgagttttatatgcattaccattaaacttttcaggtttcaagtg 21937370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 21936798 - 21937084
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||| |||||||||  || ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||    
T  21936798 ataattctccatcattctcatactctaaatcatctatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatattattaggagata 21936897  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    | || | |||||||||||||||||| |||||||||||||||||| ||||||||||||| |||  ||||||||||||||| |||||||| |||||||||||    
T  21936898 cactcgatgtggttgtgcaatacacatcaaggaactcatagtattctgaaggggattctccgaccattcctattgcatctaatatacaattattggtggg 21936997  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    | |||||||| |||||| |||||| ||| ||||| || | ||||||||||||||||||| | |||||||| ||||  ||||||||||    
T  21936998 gacgaatcgagcctaaaggttagtatggaaaccctatgcactttgagttttacatgcataaccattaaacttttcgagtttcaagtg 21937084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 2887576 - 2887294
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||| | ||||||| ||| ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||| ||||| ||||||    
T  2887576 ataattctccctcattctcttactctaaatcatccatcaactctctaatgcatgagtgaattgctggaatcataaatctgtaaaatagtgttaagagata 2887477  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc-tattgcatccaatatacatttattggtgg 208  Q
       |||||||||||||||||||||||| |||||| |||||||||| ||||| ||||||| |||||||||| |||||||||||||| |     ||||||||    
T  2887476 tatttggtgtggttgtgcaatacacgtgaaggaattcatagtatcgtgaagaggattcgtcggtcattccttattgcatccaataaa-----attggtgg 2887382  T
Q  209 gggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||| ||| | |||||||| ||||||||||||||||    
T  2887381 gggcgaatcgaacctaaatgttagtgtgacaaccccatgcgctttgagttttacatacataaccattaaacttttcaggtttcaagtg 2887294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 2889298 - 2889016
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||| | ||||||| ||| |||||||||| |||||| |||||||||||||||||||||| ||||| ||||||||||||||||| ||||| ||||||    
T  2889298 ataattctccctcattctcttactctaaatcattcatcaactctctaatgcatgagtgaattgctggaatcataaatctgtaaaatagtgttaagagata 2889199  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc-tattgcatccaatatacatttattggtgg 208  Q
       |||||||||||||||||||||||| |||||| |||||||||| ||||| |||||||||||||||||| |||||||||||||| |     ||||||||    
T  2889198 tatttggtgtggttgtgcaatacacgtgaaggaattcatagtatcgtgaagaggattcgccggtcattccttattgcatccaataaa-----attggtgg 2889104  T
Q  209 gggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||| ||| | |||||||| || ||| |||||||||    
T  2889103 gggcgaatcgaacctaaatgttagtgtgacaaccccatgcgctttgagttttacattcataaccattaaactttccagatttcaagtg 2889016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 21 - 210
Target Start/End: Original strand, 11183295 - 11183484
Alignment:
Q  21 tcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagatacgcttggtgtg 120  Q
    ||||||| ||| ||||||||||| |||||||||||||||||||||| ||||| || ||||||||| ||||||||||||||||||||||||  ||||||||    
T  11183295 tcattctcttactctaaatcatcaatcaattctctaatgcatgagtaaattgctgaaaccataaacctgtaaaatactgttaggagatacatttggtgtg 11183394  T
Q  121 gttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggg 210  Q
    |||||| ||||||| |||||||||||||| |||| |||| ||||||| | | ||||||| ||  ||||||||||||| ||||||||||||    
T  11183395 gttgtgtaatacacatcaaggaactcataatatcttgaatgggattcactgatcattcccatcacatccaatatacagttattggtgggg 11183484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 199 - 268
Target Start/End: Complemental strand, 12909526 - 12909457
Alignment:
Q  199 ttattggtgggggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcat 268  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||  |||||||||||    
T  12909526 ttattggtgggggcgaatcgaacctaaaggttagtgtggcaaccccatgcgctttgaagtttacatgcat 12909457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 199 - 296
Target Start/End: Complemental strand, 12934633 - 12934536
Alignment:
Q  199 ttattggtgggggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||  ||||||||||| || |||||   |||||||||| |||||    
T  12934633 ttattggtgggggcgaatcgaacataaaggttagtgtggcaaccccatgcgctttgaagtttacatgcataatgattaattttttcaggttttaagtg 12934536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 275; Significance: 1e-154; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 39909044 - 39908758
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  39909044 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 39908945  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39908944 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 39908845  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39908844 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 39908758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 9877657 - 9877943
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9877657 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 9877756  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9877757 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 9877856  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9877857 ggcgaatcgaacctaaaggttagtgtggcaaccccatacactttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 9877943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 39903931 - 39903645
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  39903931 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 39903832  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39903831 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 39903732  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  39903731 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcgggtttcaagtg 39903645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 9872542 - 9872828
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9872542 ataattcttcacaattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 9872641  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9872642 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 9872741  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9872742 ggcgaatcgaacctaaaggttagtgtggcaaccccatacactttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 9872828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 13556423 - 13556709
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||    
T  13556423 ataattcttcatcattctcttattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatatgtaaaatacggttaggagata 13556522  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  13556523 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctaaaggggattcgtcgatcattcctattgcatccaatatacatttattggtggg 13556622  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13556623 ggcgaatcgagccaaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 13556709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 2023050 - 2022763
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2023050 ataattcttcaccattctcttattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 2022951  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc-tattgcatccaatatacatttattggtgg 208  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||    
T  2022950 cgcttggtttggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattccttattgcatcaaatatacagttattggtgg 2022851  T
Q  209 gggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |||||||| ||||||||| |||||| |||||||| ||| ||||||||||||||||||||| | |||||||| ||||||||||||||||    
T  2022850 gggcgaatggaacctaaaggttagtatggcaacctcatgcgctttgagttttacatgcataaccattaaacttttcaggtttcaagtg 2022763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 35369009 - 35369309
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  35369009 ataattcttcctcattctcttactctaaatcatccatcaattctctaatgcatgagtgaattgttgtaaccataaatctgtaaaatactattaggagata 35369108  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacat----------- 198  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||               
T  35369109 cgcttggtgtggttgtgcaatacacatcaaggaactcatagtatcctgagggggattcgctggtcattcctattgcatccaatatacatccaatatacag 35369208  T
Q  199 ttattggtgggggcgaatcgaacctaaaagttagtgtggcaacccc---atacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagt 295  Q
    ||||||||||| ||||||||||||||||  ||||||||||||||||   || ||||||||||||||||||||| | |||||||| |||||||||||||||    
T  35369209 ttattggtgggtgcgaatcgaacctaaagattagtgtggcaacccccatatgcgctttgagttttacatgcataaccattaaacttttcaggtttcaagt 35369308  T
Q  296 g 296  Q
    |    
T  35369309 g 35369309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 14 - 296
Target Start/End: Complemental strand, 25184174 - 25183894
Alignment:
Q  14 ttcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagatacgct 113  Q
    ||||||| |||||| ||| ||||||||||||||||||||||||||| || ||||||||| | |||      |||||||||||| |||| |||||||||||    
T  25184174 ttcttcaccattctcttactctaaatcatccatcaattctctaatgtattagtgaattgctagaa------atctgtaaaatattgtttggagatacgct 25184081  T
Q  114 tggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcg 213  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||| |    
T  25184080 tggtatggttgtgcaataaacgtcaaggaactcatagtatcctgaaggggattcgccggtaactcctattgcatccaatatacagttattggtgggggag 25183981  T
Q  214 aatcgaacctaaaagttagtgtggcaac----cccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||| | ||||||||||||    ||||| |||||| |||||||||||||| ||||||||| |||||||||||||||||    
T  25183980 aatcgaacctaaaggatagtgtggcaacccggcccatgcgctttcagttttacatgcataatcattaaagatttcaggtttcaagtg 25183894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 42 - 296
Target Start/End: Complemental strand, 43378491 - 43378237
Alignment:
Q  42 tccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaagg 141  Q
    |||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||    
T  43378491 tccatcaattctttaatgcattagtgaattgctggaaccataaatctgtaaaatactgttaggagatacgcttaatgtgattgtgcaatacacgtcaagg 43378392  T
Q  142 aactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacctaaaagttagtgtggcaac 241  Q
    |||| ||| ||||||||||||||||| |  |||||||| |||||||| |||||||| |||||||||||||  ||||||||||||| ||||||||| ||||    
T  43378391 aactaataatatcctgaaggggattcacttgtcattccaattgcatcaaatatacaattattggtgggggtaaatcgaacctaaatgttagtgtgacaac 43378292  T
Q  242 cccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||| ||||||||||||||||||||| | |||||||| ||||| ||||||||||    
T  43378291 cccatgcgctttgagttttacatgcataaccattaaacttttcaagtttcaagtg 43378237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 10 - 236
Target Start/End: Complemental strand, 4555739 - 4555512
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||| ||||| || |||    
T  4555739 ataattcttcaccattctattactctaaatcatccattaattctctaatgcatgagtgaattattggtaccataaatctgtaaaataatgttaagaaata 4555640  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggt-gg 208  Q
     | |||||||| || |||||||||| |||| |||||| || |||| |||| || ||| |  ||||||||||||||||||||||||||| ||||||||  |    
T  4555639 tgtttggtgtgattttgcaatacacatcaatgaactcgtaatatcttgaaaggaatttgttggtcattcctattgcatccaatatacagttattggtaag 4555540  T
Q  209 gggcgaatcgaacctaaaagttagtgtg 236  Q
    || |||||| ||||||||||||||||||    
T  4555539 ggacgaatcaaacctaaaagttagtgtg 4555512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 296
Target Start/End: Complemental strand, 4553727 - 4553663
Alignment:
Q  232 gtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||| |||||||||||||||||| |||||| ||||| | |||||||| ||| || |||||||||    
T  4553727 gtgtgacaaccccatacgctttgaattttacgtgcataaccattaaactttttagatttcaagtg 4553663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 61
Target Start/End: Original strand, 43540881 - 43540928
Alignment:
Q  14 ttcttcatcattctattattctaaatcatccatcaattctctaatgca 61  Q
    |||| ||||||||| ||| ||||||||||| |||||||||||||||||    
T  43540881 ttctccatcattctcttactctaaatcatctatcaattctctaatgca 43540928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 236
Target Start/End: Original strand, 29006660 - 29006688
Alignment:
Q  208 ggggcgaatcgaacctaaaagttagtgtg 236  Q
    |||||||||||||||||||||||||||||    
T  29006660 ggggcgaatcgaacctaaaagttagtgtg 29006688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 275; Significance: 1e-154; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 35096114 - 35095828
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35096114 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 35096015  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35096014 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 35095915  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35095914 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 35095828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 35091001 - 35090715
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35091001 ataattcatcaaaattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 35090902  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35090901 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 35090802  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||    
T  35090801 ggcgaatcgaacctaaaggttagtgtggcaaccccatacactttaaattttacatgcatgatcattaaacatttcaggtttcaagtg 35090715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 32429401 - 32429688
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||| | ||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32429401 ataattctccctcattctcttactctaaatcatccatcaattctttaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 32429500  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc-tattgcatccaatatacatttattggtgg 208  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  32429501 cgctttgtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattccttattgcatccaatatacagttattggtgg 32429600  T
Q  209 gggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| | |||||||  ||||||||||||||||    
T  32429601 gggcgaatcgaacctaaaggttagtgtggcaaccccatgcgctttgagttttacatgcataaccattaaaattttcaggtttcaagtg 32429688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 30019968 - 30020254
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  30019968 ataattcttcaccattctcttactctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatatgtgaaatactgttaggagata 30020067  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc-tattgcatccaatatacatttattggtgg 208  Q
    || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  30020068 cgtttggtgtggttatgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattccttattgcatccaatatacagttattggtgg 30020167  T
Q  209 gggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |||||||||||||| ||| |||| | ||| |||||||| ||||||||||||||||||||| | |||| ||| ||||||||||||||||    
T  30020168 gggcgaatcgaacc-aaaggttaatatggtaaccccatgcgctttgagttttacatgcataaccattgaacttttcaggtttcaagtg 30020254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 22 - 296
Target Start/End: Complemental strand, 18716563 - 18716286
Alignment:
Q  22 cattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagatacgcttggtgtg- 120  Q
    |||||| ||| |||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||     
T  18716563 cattctcttactctaaatcatccatcaattctctaatacaagagtgaattgctggaaccataaatctgtaaaatactattagaagatacgcttggtgtgt 18716464  T
Q  121 -gttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcct-attgcatccaatatacatttattggtgggggcgaatcg 218  Q
     ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| | ||||||||||||||| | ||||||||||||||||||||    
T  18716463 ggttgtgcaatacacgtcaaagaactcttagtatcctgaaggggattcgccggtcattctttattgcatccaatatatagttattggtgggggcgaatcg 18716364  T
Q  219 aacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||| | |||||||| ||||||||||||||||    
T  18716363 aacctaaaggttagtgtggcaaccccatgcgctttgagttttacatgcattaccattaaacttttcaggtttcaagtg 18716286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 34279609 - 34279896
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||||| || |||| ||| ||||||||| |||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||    
T  34279609 ataattcttcctcgttctcttactctaaatcaaccatcaattctctaatgcatgagtgaattcctgaaaccataaatctgtaaaatactgttaggagata 34279708  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||| ||||||||||||  ||||||||| ||| |||||||||||||||||| ||||||||| |||||||||||    
T  34279709 cgcttggtgtggttgtgcaatacacgtcaagaaactcatagtattttgaaggggaatcgtcggtcattcctattgcattcaatatacagttattggtggg 34279808  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcatt-aaacatttcaggtttcaagtg 296  Q
    ||||||||||| ||||| ||||||||| ||| ||||| ||||||||||||||||||||| | |||| |||| ||||||||||||||||    
T  34279809 ggcgaatcgaagctaaaggttagtgtgacaatcccatgcgctttgagttttacatgcataaccattaaaacgtttcaggtttcaagtg 34279896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 18737248 - 18736959
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||| | ||||||| ||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||| ||||     
T  18737248 ataattctccctcattctcttactctaaatcatccatcaattctctaattcatgagtgaattgctggaaccataaatctgtaaaatacttttagaagatt 18737149  T
Q  110 cgcttgg--tgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattc-ctattgcatccaatatacatttattggt 206  Q
    |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||| | ||||||||    
T  18737148 cgcttggtgtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattctttattgcatctaatatatagttattggt 18737049  T
Q  207 gggggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |||||||||| ||||||||| |||||| |||| ||| ||| ||||||||||||||||||||| | |||||||| ||||| ||||||||||    
T  18737048 gggggcgaattgaacctaaaggttagtttggctacctcatgcgctttgagttttacatgcataaccattaaacttttcaagtttcaagtg 18736959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 18670926 - 18670641
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||| | ||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  18670926 ataattctccctcattctcttactctaaatcatccatcaattctctaatgcatgagtgacttgttggaaccataaatctgtaaaatattgttaggagata 18670827  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcc-tattgcatccaatatacatttattggtgg 208  Q
    | ||||||||||||||||||||||  | |||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||| | ||||||||||    
T  18670826 cacttggtgtggttgtgcaataca--tgaaggaactcatagtatcctgaa-gggattcgccggtcattccttattgcattcaatatatagttattggtgg 18670730  T
Q  209 gg-gcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    || | |||||||||||||| |||||||||||||| |||| |||||||| |||||||||||| | |||||||| ||||||||||||||||    
T  18670729 ggtgtgaatcgaacctaaaggttagtgtggcaactccatgcgctttgaattttacatgcataaccattaaacttttcaggtttcaagtg 18670641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 21 - 296
Target Start/End: Original strand, 3424829 - 3425104
Alignment:
Q  21 tcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagatacgcttggtgtg 120  Q
    ||||||| ||| |||||||||||||| ||||||||||||||||||||| ||  ||||| |||||||||||||||||||||||||||||||| ||||||||    
T  3424829 tcattctcttactctaaatcatccattaattctctaatgcatgagtgagttactggaaacataaatctgtaaaatactgttaggagatacggttggtgtg 3424928  T
Q  121 gttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaa 220  Q
    |||||||||||||| |||| |||||||||||||||| |||| ||||||| | |||||||||||||||||||||| || ||||||||||||| ||||||||    
T  3424929 gttgtgcaatacacatcaatgaactcatagtatcctaaaggagattcgctgttcattcctattgcatccaatattcagttattggtgggggagaatcgaa 3425028  T
Q  221 cctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |||||| ||||||||| ||| ||||| ||||||||||||| ||||||| || ||||||| ||||||||||||||||    
T  3425029 cctaaaggttagtgtgacaatcccatgcgctttgagttttgcatgcataataattaaacttttcaggtttcaagtg 3425104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 10 - 293
Target Start/End: Complemental strand, 47071494 - 47071212
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||| | ||||||| ||| ||||||| ||| ||||||||||||||| |||||||||||||| ||||||||||| |||||||||||| || ||||||    
T  47071494 ataattctccctcattctcttactctaaattatctatcaattctctaatgaatgagtgaattgtttgaaccataaatttgtaaaatactgatatgagata 47071395  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
     | |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||| ||||||||| |||||||| |||||| | ||    
T  47071394 tgattggtgtggttgtgcaatacacatcaaggaactcatagtatcatgaaggggattcgctggtcattcatattgcatcaaatatacaattattgat-gg 47071296  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaa 293  Q
    || |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| | |||||||| |||||||||||||    
T  47071295 ggtgaatcgaacctaaaggttagtgtggcaaccccatgcgctttgagttttacatgcataaccattaaacttttcaggtttcaa 47071212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 74 - 296
Target Start/End: Original strand, 3415334 - 3415556
Alignment:
Q  74 tggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggt 173  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||  |||    
T  3415334 tggaaccataaatctgtaaaatactattaggagatacggttggtgtggttgtgcaatacacatcaatgaactcatagtatcctgaaggagattcgttggt 3415433  T
Q  174 cattcctattgcatccaatatacatttattggtgggggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatca 273  Q
    |||||||||| ||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||| ||||| |||||||||||||||||||||||| |    
T  3415434 cattcctattacatccaatatacagttattggtgggggcgaattgaacctaaaggttagtgtggcaatcccatgcgctttgagttttacatgcatgataa 3415533  T
Q  274 ttaaacatttcaggtttcaagtg 296  Q
    |||||| ||||||||||||||||    
T  3415534 ttaaacttttcaggtttcaagtg 3415556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 33 - 261
Target Start/End: Original strand, 54859298 - 54859525
Alignment:
Q  33 tctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatac 132  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||| |||||| |||||    
T  54859298 tctaaatcatccatcaattctctaatgcacgagtgaattgctggaaccataaatccgtaaaatactgttaggagatacgtttggtgtagttgtgtaatac 54859397  T
Q  133 acgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacctaaaagttag 232  Q
    || |||||||||||||| |||| |||||||| ||||| ||| ||||||||||||||||||||||| |||||||| ||| ||||| |||| |||| |||||    
T  54859398 acatcaaggaactcatattatcatgaaggggtttcgctggtaattcctattgcatccaatatacaattattggt-gggacgaattgaacataaaggttag 54859496  T
Q  233 tgtggcaaccccatacgctttgagtttta 261  Q
    |||||||||||||| ||||||||||||||    
T  54859497 tgtggcaaccccatgcgctttgagtttta 54859525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 10 - 197
Target Start/End: Original strand, 34128355 - 34128542
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||| | ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||    
T  34128355 ataattctccctcattctcttactctaaatcatccatcaattttctaatgcatgagtgaattgttgaaaccataaatctgtaaaatatggttaggagata 34128454  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatataca 197  Q
     | |||||||||||||||||||||| ||| | |||||||||||||||||||| |||| || |||||||||| ||||||||||||||||    
T  34128455 tgtttggtgtggttgtgcaatacacctcatgaaactcatagtatcctgaaggagatttgctggtcattccttttgcatccaatataca 34128542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 107 - 296
Target Start/End: Original strand, 14646483 - 14646672
Alignment:
Q  107 atacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggt 206  Q
    ||||||||||||||||| |||||||||| | ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||| ||    
T  14646483 atacgcttggtgtggttctgcaatacacattaaggaactcatagtatcctaaaggggattcgcgggtcattcctattgcatccaatatacagttattagt 14646582  T
Q  207 gggggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |||||| ||||||||||||| || ||||||| ||||||||  ||||| |||||||||||||| | |||||||| |||||| |||||||||    
T  14646583 gggggcaaatcgaacctaaaggtcagtgtggaaaccccatgagctttaagttttacatgcataaccattaaacttttcagatttcaagtg 14646672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 14643848 - 14643948
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||||| | ||||| ||| ||||||||||||||||||||||||||| ||  |||||||| ||||||||||||||| ||||||||||||||| ||||    
T  14643848 ataattcttcctaattctcttactctaaatcatccatcaattctctaatgtataggtgaattgctggaaccataaatctctaaaatactgttaggggata 14643947  T
Q  110 c 110  Q
    |    
T  14643948 c 14643948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 34602065 - 34602121
Alignment:
Q  12 aattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtga 68  Q
    |||||| | ||||||| ||| ||||||||||||||||||| ||| ||||||||||||    
T  34602065 aattctccctcattcttttactctaaatcatccatcaattttcttatgcatgagtga 34602121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 296
Target Start/End: Original strand, 34128574 - 34128620
Alignment:
Q  250 ctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||||| | |||||||| ||| ||||||||||||    
T  34128574 ctttgagttttacatgcataaccattaaacttttaaggtttcaagtg 34128620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 230
Target Start/End: Complemental strand, 23920357 - 23920276
Alignment:
Q  149 agtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacctaaaagtt 230  Q
    ||||| ||||||| |||||   ||||||||   ||||||||||||||||  ||||||||||||||||| ||| | |||||||    
T  23920357 agtattctgaaggagattcagtggtcattctgtttgcatccaatatacaaatattggtgggggcgaattgaatccaaaagtt 23920276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 48779902 - 48779841
Alignment:
Q  106 gatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattc 167  Q
    |||| ||||||||||  |||||||  |||||||| ||  |||||||||||||||||||||||    
T  48779902 gatatgcttggtgtgaatgtgcaagtcacgtcaatgatttcatagtatcctgaaggggattc 48779841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 158
Target Start/End: Original strand, 46641401 - 46641437
Alignment:
Q  122 ttgtgcaatacacgtcaaggaactcatagtatcctga 158  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  46641401 ttgtgcaatacacatcaaggaactcataatatcctga 46641437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 275; Significance: 1e-154; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 28598395 - 28598109
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28598395 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 28598296  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28598295 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 28598196  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28598195 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 28598109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 3465559 - 3465273
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3465559 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 3465460  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3465459 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 3465360  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3465359 gacgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 3465273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 28574383 - 28574097
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28574383 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 28574284  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28574283 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 28574184  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28574183 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttaagttttacatgcatgatcattaaacatttcaggtttcaagtg 28574097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 33 - 296
Target Start/End: Complemental strand, 13654398 - 13654135
Alignment:
Q  33 tctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatac 132  Q
    |||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13654398 tctaaatcatccattaattctctaatgcatgagtgaattgctgaaaccataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatac 13654299  T
Q  133 acgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacctaaaagttag 232  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  13654298 acgtcaaggaactcatagtatcctgaaggggattcgccggtaactcctattgcatccaatatacagttattggtgggggcgaatcgaacctaaaggttag 13654199  T
Q  233 tgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |||||||||||||| |||||||| |||||||||| | | |||||||||||||||||||||||||    
T  13654198 tgtggcaaccccatgcgctttgaattttacatgcgtaagcattaaacatttcaggtttcaagtg 13654135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 43358839 - 43358551
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||| | ||||||| ||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||    
T  43358839 ataattctccctcattctcttactctaaattatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaaaattgttaggagata 43358740  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcata--gtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtg 207  Q
     | |||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  43358739 tgtttggtgtggttgtgcaatacacgtcaaggaactcatatagtattctgaaggggattcgccggtcactcctattgcatccaatatacagttattggtg 43358640  T
Q  208 ggggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||| ||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  43358639 ggggcaaatcgaacctaaatgttagtgtggcaacctcatgcgctttgagttttacatgcataatcattaaacttttcaggtttcaagtg 43358551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 10186697 - 10186980
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatac----tgttagga 105  Q
    |||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||     ||||||||    
T  10186697 ataattctccatcattctcttactctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaataaatattgttagga 10186796  T
Q  106 gatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattgg 205  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||       |||||| | ||||||| ||||||||||||||||||| |||||||    
T  10186797 gatacgtttggtgtggttgtgcaatacacgtcaaggaactcatagtatc-------ggattcactggtcatttctattgcatccaatatacaattattgg 10186889  T
Q  206 tgggggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| || |||||||||| ||||||||||||||||    
T  10186890 tgggggcgaatcgaacctaaaggttagtgtggcaaccccatgcgctttgagttttacatgtataatcattaaacttttcaggtttcaagtg 10186980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 21 - 296
Target Start/End: Complemental strand, 1187903 - 1187627
Alignment:
Q  21 tcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagatacgcttggtgtg 120  Q
    ||||||| ||| ||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||    
T  1187903 tcattctcttactctaaatcatccatcaattctttaatgcatgagtgaattggtagaaccataaatctgtaaaatattgttaggagatacgcttggtgtg 1187804  T
Q  121 gttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaa 220  Q
    |||||||||||||| ||||||||||||||||||| |||||| ||||||| |||| |||||||||||||||||||||| ||||||||||||||||||| ||    
T  1187803 gttgtgcaatacacatcaaggaactcatagtatcatgaaggagattcgctggtctttcctattgcatccaatatacagttattggtgggggcgaatcaaa 1187704  T
Q  221 cctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttc-aggtttcaagtg 296  Q
    |||||| ||||||||||||||||||| | ||||||||||||||||||| |  ||||||  |||| ||||||||||||    
T  1187703 cctaaaggttagtgtggcaaccccatgcactttgagttttacatgcataactattaaatttttctaggtttcaagtg 1187627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 44524140 - 44524422
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||| ||||||||| ||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44524140 ataattctccatcattctcttactttaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 44524239  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||   |||||||||||||||||| |||||||||||||||||| | |||||||||||| || ||||||||||||||||||||||||| |||||| ||||    
T  44524240 cgct---tgtggttgtgcaatacacatcaaggaactcatagtattccgaaggggattcgtcgatcattcctattgcatccaatatacagttattgatggg 44524336  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||| ||||| ||||||||| ||||||||| ||||||||||||| ||||||| | ||||| || ||||||||||||||||    
T  44524337 ggcgaatcgaa-ctaaatgttagtgtgacaaccccatgcgctttgagttttgcatgcataaccattacacttttcaggtttcaagtg 44524422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 10 - 295
Target Start/End: Complemental strand, 19310910 - 19310626
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||| | ||||||| ||| | |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||| ||||||||||    
T  19310910 ataattctccctcattctcttactataaatcatccatcaattctctaatgcatgaatgaattgctggaaccataaatctgtaaaacactattaggagata 19310811  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
     |||||||| |||||||||||||||||||||||||||||| ||| || |||||||||||| ||||||||||||||||||||||||| | |||||||||||    
T  19310810 tgcttggtgcggttgtgcaatacacgtcaaggaactcataatatact-aaggggattcgctggtcattcctattgcatccaatatagagttattggtggg 19310712  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagt 295  Q
    || |||||||||||||| |||||||| |||||||||| |||||||||||| |||||||| | |||||||| |||||||||||||||    
T  19310711 ggtgaatcgaacctaaaggttagtgttgcaaccccatgcgctttgagtttcacatgcataaccattaaacttttcaggtttcaagt 19310626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 35 - 296
Target Start/End: Complemental strand, 16051267 - 16051006
Alignment:
Q  35 taaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacac 134  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  16051267 taaatcatccatcaattctctaatgcatgagtgaattgctgaaaccataaatctgtaaaatactgttaggaaatacgcttggtgtggctgtgcaatacac 16051168  T
Q  135 gtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacctaaaagttagtg 234  Q
     ||||||||||||||||||| ||||||| ||||||  ||||||| | ||||||| |||||||| |||||||||||||||||||||||||||| |||||||    
T  16051167 atcaaggaactcatagtatcttgaagggtattcgctagtcattcattttgcatcaaatatacagttattggtgggggcgaatcgaacctaaaggttagtg 16051068  T
Q  235 tggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |||||||||| | |||| |||||||||||||||| | |||||||  ||||||||||||||||    
T  16051067 tggcaaccccgtgcgctctgagttttacatgcataaccattaaatttttcaggtttcaagtg 16051006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 54 - 296
Target Start/End: Original strand, 48366213 - 48366455
Alignment:
Q  54 ctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtat 153  Q
    ||||||||| ||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  48366213 ctaatgcattagtgaattgctggaaccataaatctgtaaaatattgtttggagatacgcttggtgtggttgtgcaatacacgtcaaggacctcatagtat 48366312  T
Q  154 cctgaaggggattcgccggtcattcc-tattgcatccaatatacatttattggtgggggcgaatcgaacctaaaagttagtgtggcaaccccatacgctt 252  Q
    ||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||| ||| || |||||||||||| |||||    
T  48366313 cctcaaggggattcgccggtcattccttattgcatccaatatacaattattggtgggggcaaatcgaacctaaaggttggtatggcaaccccatgcgctt 48366412  T
Q  253 tgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |||| ||||||||||| | ||||| |  ||||||||||||||||    
T  48366413 tgag-tttacatgcataaccattagatttttcaggtttcaagtg 48366455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 54 - 296
Target Start/End: Complemental strand, 29681632 - 29681391
Alignment:
Q  54 ctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtat 153  Q
    ||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29681632 ctaatgcattagtgaattgctggaaccataaatctgtaaaatattgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggacctcatagtat 29681533  T
Q  154 cctgaaggggattcgccggtcattcc-tattgcatccaatatacatttattggtgggggcgaatcgaacctaaaagttagtgtggcaaccccatacgctt 252  Q
    ||| || |||||| |||||||||||| |||||||||||||||||| |||||||| ||||| ||||||||||||| ||| || |||||||||||| |||||    
T  29681532 cctcaaagggatttgccggtcattccttattgcatccaatatacagttattggt-ggggcaaatcgaacctaaaggttggtatggcaaccccatgcgctt 29681434  T
Q  253 tgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |||| ||||||||||| | ||||| |  ||||||||||||||||    
T  29681433 tgag-tttacatgcataaccattagatttttcaggtttcaagtg 29681391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 10 - 153
Target Start/End: Complemental strand, 3468153 - 3468010
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3468153 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 3468054  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtat 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  3468053 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtat 3468010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 136 - 296
Target Start/End: Complemental strand, 35624977 - 35624817
Alignment:
Q  136 tcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacctaaaagttagtgt 235  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||| |||||| |    
T  35624977 tcaaggaactcatagtatcctgaaggggattcgccggtcactcctattgcatccaatatacagttgttggtgggggcgaatcgaacctaaaggttagtat 35624878  T
Q  236 ggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    | ||||||||  ||||||||||||||||||||| | |||||||  ||||| ||||||||||    
T  35624877 gacaaccccacgcgctttgagttttacatgcataaccattaaatttttcatgtttcaagtg 35624817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 93 - 279
Target Start/End: Original strand, 17415386 - 17415572
Alignment:
Q  93 aatactgttaggagatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaat 192  Q
    |||| ||||| |||||| | |||||||| || |||||||||| ||||| |||| |||||||||||||| ||||| |  ||||||||||||| ||||||||    
T  17415386 aatattgttaagagatatgattggtgtgattatgcaatacacatcaagaaactaatagtatcctgaagaggatttgatggtcattcctatttcatccaat 17415485  T
Q  193 atacatttattggtgggggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaac 279  Q
    ||||| |||||||||||||| ||||||||||||| ||||||||| ||||||||||| |||||| |||||| ||||| | ||||||||    
T  17415486 atacaattattggtgggggcaaatcgaacctaaatgttagtgtgacaaccccatacactttgatttttacgtgcataaccattaaac 17415572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 145 - 296
Target Start/End: Original strand, 21431918 - 21432070
Alignment:
Q  145 tcatagtatcctgaaggggattcgccggtcattcct-attgcatccaatatacatttattggtgggggcgaatcgaacctaaaagttagtgtggcaaccc 243  Q
    ||||||||||| ||||||||||| |||||||||||| ||||||  ||||||| | ||||||||||||| |||||||| |||||||||||||||||||||     
T  21431918 tcatagtatccagaaggggattcaccggtcattccttattgcaaacaatatatagttattggtgggggtgaatcgaatctaaaagttagtgtggcaacct 21432017  T
Q  244 catacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||| || |||||||||||||||||| | |||||||| ||||||||||||||||    
T  21432018 catgcgatttgagttttacatgcataaccattaaacttttcaggtttcaagtg 21432070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 10 - 128
Target Start/End: Complemental strand, 35626258 - 35626140
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||| | ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  35626258 ataattctccctcattctcttactctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctataaaatactattaggagata 35626159  T
Q  110 cgcttggtgtggttgtgca 128  Q
    || | | ||||||||||||    
T  35626158 cgttcgatgtggttgtgca 35626140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 17414654 - 17414742
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatact 98  Q
    |||||||| | ||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  17414654 ataattctccctcattctcttactctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctggaaaatact 17414742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 85
Target Start/End: Original strand, 21431790 - 21431865
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaa 85  Q
    |||||||| | ||||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  21431790 ataattctccctcattctcttaatctaaatcatccatcaattctctaatgcatcagtgaattgatggaaccataaa 21431865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 243
Target Start/End: Original strand, 3696450 - 3696654
Alignment:
Q  35 taaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatacac 134  Q
    |||||||||||||||||||||   | |||| ||||||| ||||||||| ||| |||||||||| |||| |||||||  ||| |||| |||||  | ||||    
T  3696450 taaatcatccatcaattctctgcagaatgaatgaattgatggaaccat-aatttgtaaaatacggttaagagatacttttgctgtgattgtg--aaacac 3696546  T
Q  135 gtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacctaaaagttagtg 234  Q
     |||||||| |||||||||| |||||| ||||    | ||||| |||||||||||||||| || |||| ||||| |  | ||| |||||||| ||||||     
T  3696547 atcaaggaattcatagtatcttgaaggagatttattgatcatt-ctattgcatccaatattcaattatcggtggagaagcatcaaacctaaaggttagta 3696645  T
Q  235 tggcaaccc 243  Q
    || ||||||    
T  3696646 tgacaaccc 3696654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 49053867 - 49053934
Alignment:
Q  106 gatacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggt 173  Q
    |||| ||||||||||  |||||||  |||||||||||  |||| ||||||||||||||||||||||||    
T  49053867 gatatgcttggtgtgaatgtgcaagtcacgtcaaggatttcattgtatcctgaaggggattcgccggt 49053934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 235
Target Start/End: Original strand, 49053964 - 49053996
Alignment:
Q  203 tggtgggggcgaatcgaacctaaaagttagtgt 235  Q
    |||||||||||||||||||||||| ||||||||    
T  49053964 tggtgggggcgaatcgaacctaaaggttagtgt 49053996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 271; Significance: 1e-151; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 14917500 - 14917786
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14917500 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 14917599  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  14917600 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcatttctattgcatccaatatacatttattggtgga 14917699  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14917700 ggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 14917786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 10 - 296
Target Start/End: Original strand, 17720644 - 17720930
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17720644 ataattcttcaccattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 17720743  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17720744 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 17720843  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17720844 ggcgaatcgaacctaaaggttaatgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 17720930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 45120472 - 45120186
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  45120472 ataattcttcatcattctattattctaaatcatccatcaattctccaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 45120373  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45120372 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 45120273  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45120272 ggcgagtcgaacctaaaggttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 45120186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 42780270 - 42779983
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  42780270 ataattcttcaccattctcttactctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatttgtaaaatactgttaggagata 42780171  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattc-ctattgcatccaatatacatttattggtgg 208  Q
    |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||    
T  42780170 catttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcgttattgcatccaatatacagttattggtgg 42780071  T
Q  209 gggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||    
T  42780070 gggcgaatcgaacctaaaggttagtgtggtaaccccatatgctttgagttttacatgcataatcattaaacttttcaggtttcaagtg 42779983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 10 - 260
Target Start/End: Original strand, 30283559 - 30283809
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||| |||| |||| ||| ||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||    
T  30283559 ataattctccatccttctcttactctaaatcatcaatcaattctctaatgcatgagtgaattgctagaaccataaatctgtaaaatactattaggagata 30283658  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30283659 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtggg 30283758  T
Q  210 ggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagtttt 260  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||||||||    
T  30283759 ggcgaatcgaacttaaaggttagtgtggcaaccacatacgctttgagtttt 30283809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 16284524 - 16284236
Alignment:
Q  10 ataattcttcatcattctattattctaaa-tcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagat 108  Q
    |||||||| | ||||||| ||| |||||| |||| |||||| |||||||||||||||||||||| || ||||||||||| |||||||||  |||||||||    
T  16284524 ataattctccctcattctcttactctaaaatcattcatcaactctctaatgcatgagtgaattgctgaaaccataaatcagtaaaataccattaggagat 16284425  T
Q  109 acgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaa-ggggattcgccggtcattcctattgcatccaatatacatttattggtg 207  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||    
T  16284424 acgcttggtgtggttgtacaatacacgtcaaggaactcatagtatcctgaaaggggattcgctggtcattcctattgcatccaatatacagttattggtg 16284325  T
Q  208 ggggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  16284324 ggggcgaatcgaacctaaaaggtagtgtggcaaccccatgcgctttgagttttacatgcataatcattaaacttttcaggtttcaagtg 16284236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 141 - 296
Target Start/End: Original strand, 39196121 - 39196276
Alignment:
Q  141 gaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacctaaaagttagtgtggcaa 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39196121 gaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacctaaaggttagtgtggcaa 39196220  T
Q  241 ccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39196221 ccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 39196276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 10 - 133
Target Start/End: Complemental strand, 716353 - 716230
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||| | ||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||    
T  716353 ataattctccttcattctcttactctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccctaaatctgtaaaatacagttaggagata 716254  T
Q  110 cgcttggtgtggttgtgcaataca 133  Q
    || ||||||||||||| |||||||    
T  716253 cgtttggtgtggttgtacaataca 716230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 227 - 296
Target Start/End: Complemental strand, 716230 - 716161
Alignment:
Q  227 agttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||||| ||||||||||||||||    
T  716230 agttagtgtggcaaccccatgcgctttgagttttacatgcataaccattaaacttttcaggtttcaagtg 716161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 33 - 296
Target Start/End: Complemental strand, 144159 - 143896
Alignment:
Q  33 tctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatac 132  Q
    |||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  144159 tctaaatcatccattaattctctaatgcatgagtgaattgctgaaaccataaatctgtaaaatactgttaggagatacgcttggtgtggttgtgcaatac 144060  T
Q  133 acgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacctaaaagttag 232  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  144059 acgtcaaggaactcatagtatcctgaaggggattcgccggtaactcctattgcatccaatatacagttattggtgggggcgaatcgaacctaaaggttag 143960  T
Q  233 tgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |||||||||||||| |||||||| |||||||||| | | |||||||||||||||||||||||||    
T  143959 tgtggcaaccccatgcgctttgaattttacatgcgtaagcattaaacatttcaggtttcaagtg 143896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 195; Significance: 1e-106; HSPs: 2)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 10 - 208
Target Start/End: Original strand, 2137 - 2335
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2137 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgctggaaccataaatctgtaaaatactgttaggagata 2236  T
Q  110 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgg 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2237 cgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgg 2335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223; HSP #2
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 161 - 296
Target Start/End: Original strand, 7246 - 7381
Alignment:
Q  161 gggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagtttt 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7246 gggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacctaaaggttagtgtggcaaccccatacgctttgagtttt 7345  T
Q  261 acatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |||||||||||||||||| |||  || |||||||||    
T  7346 acatgcatgatcattaaaaattaaagatttcaagtg 7381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 160; Significance: 3e-85; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 133 - 296
Target Start/End: Complemental strand, 16570 - 16407
Alignment:
Q  133 acgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacctaaaagttag 232  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16570 acgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggtgggggcgaatcgaacctaaaggttag 16471  T
Q  233 tgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16470 tgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 16407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 242 - 296
Target Start/End: Complemental strand, 16366 - 16312
Alignment:
Q  242 cccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16366 cccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 16312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 107 - 296
Target Start/End: Complemental strand, 170807 - 170618
Alignment:
Q  107 atacgcttggtgtggttgtgcaatacacgtcaaggaactcatagtatcctgaaggggattcgccggtcattcctattgcatccaatatacatttattggt 206  Q
    ||||||||||||||||| |||||||||| | ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||| ||    
T  170807 atacgcttggtgtggttctgcaatacacattaaggaactcatagtatcctaaaggggattcgcgggtcattcctattgcatccaatatacagttattagt 170708  T
Q  207 gggggcgaatcgaacctaaaagttagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |||||| ||||||||||||| || ||||||| ||||||||  ||||| |||||||||||||| | |||||||| |||||| |||||||||    
T  170707 gggggcaaatcgaacctaaaggtcagtgtggaaaccccatgagctttaagttttacatgcataaccattaaacttttcagatttcaagtg 170618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 173444 - 173344
Alignment:
Q  10 ataattcttcatcattctattattctaaatcatccatcaattctctaatgcatgagtgaattgttggaaccataaatctgtaaaatactgttaggagata 109  Q
    |||||||||| | ||||| ||| ||||||||||||||||||||||||||| ||  |||||||| ||||||||||||||| ||||||||||||||| ||||    
T  173444 ataattcttcctaattctcttactctaaatcatccatcaattctctaatgtataggtgaattgctggaaccataaatctctaaaatactgttaggggata 173345  T
Q  110 c 110  Q
    |    
T  173344 c 173344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0756 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0756
Description:

Target: scaffold0756; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 230 - 296
Target Start/End: Complemental strand, 4011 - 3945
Alignment:
Q  230 tagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 296  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4011 tagtgtggcaaccccatacgctttgagttttacatgcatgatcattaaacatttcaggtttcaagtg 3945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University