View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13914_high_10 (Length: 349)

Name: NF13914_high_10
Description: NF13914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13914_high_10
NF13914_high_10
[»] chr1 (10 HSPs)
chr1 (1-339)||(33018970-33019309)
chr1 (11-99)||(31049716-31049804)
chr1 (12-115)||(46759227-46759330)
chr1 (7-77)||(31499295-31499365)
chr1 (1-88)||(24321360-24321447)
chr1 (10-84)||(2246632-2246705)
chr1 (6-60)||(3138695-3138749)
chr1 (10-108)||(22575643-22575741)
chr1 (10-76)||(40800475-40800541)
chr1 (23-63)||(3311663-3311703)
[»] chr5 (16 HSPs)
chr5 (11-109)||(12359877-12359974)
chr5 (10-99)||(898366-898455)
chr5 (1-108)||(11761165-11761271)
chr5 (14-99)||(6996092-6996177)
chr5 (1-63)||(24916347-24916409)
chr5 (1-95)||(33587538-33587632)
chr5 (1-115)||(40156297-40156411)
chr5 (18-103)||(43196338-43196423)
chr5 (1-63)||(24992239-24992301)
chr5 (37-108)||(26386937-26387007)
chr5 (17-63)||(35290816-35290862)
chr5 (6-63)||(5985042-5985099)
chr5 (6-63)||(18479966-18480023)
chr5 (10-95)||(27579499-27579584)
chr5 (23-115)||(34112078-34112170)
chr5 (7-95)||(36239985-36240072)
[»] chr4 (28 HSPs)
chr4 (6-109)||(20875302-20875405)
chr4 (2-63)||(11794630-11794691)
chr4 (10-97)||(22197870-22197957)
chr4 (18-115)||(10550539-10550636)
chr4 (6-63)||(19533924-19533981)
chr4 (2-63)||(30191574-30191635)
chr4 (10-114)||(35686515-35686619)
chr4 (1-57)||(50181159-50181215)
chr4 (1-115)||(25918302-25918416)
chr4 (10-95)||(2570951-2571036)
chr4 (10-63)||(6013118-6013171)
chr4 (10-95)||(9029518-9029603)
chr4 (6-63)||(30867348-30867405)
chr4 (24-108)||(4455415-4455499)
chr4 (12-63)||(19903751-19903802)
chr4 (68-115)||(36118007-36118054)
chr4 (10-96)||(7614723-7614809)
chr4 (1-91)||(31010313-31010403)
chr4 (2-40)||(36117966-36118004)
chr4 (18-95)||(19897737-19897814)
chr4 (2-63)||(29585946-29586007)
chr4 (2-99)||(36523033-36523130)
chr4 (6-63)||(53987683-53987740)
chr4 (11-63)||(20651518-20651570)
chr4 (17-61)||(27977783-27977827)
chr4 (10-98)||(29052169-29052256)
chr4 (7-63)||(31293963-31294019)
chr4 (3-63)||(39332251-39332311)
[»] chr8 (16 HSPs)
chr8 (10-108)||(18020977-18021075)
chr8 (10-108)||(33700129-33700227)
chr8 (10-114)||(32855512-32855616)
chr8 (10-115)||(8394454-8394559)
chr8 (1-114)||(38957269-38957382)
chr8 (6-92)||(18090432-18090517)
chr8 (1-115)||(38958810-38958924)
chr8 (10-109)||(18035208-18035305)
chr8 (6-58)||(35584080-35584132)
chr8 (6-60)||(20671359-20671413)
chr8 (3-93)||(23849715-23849805)
chr8 (6-44)||(26628005-26628043)
chr8 (10-48)||(40716639-40716677)
chr8 (10-63)||(9632263-9632316)
chr8 (14-103)||(11492149-11492237)
chr8 (11-84)||(28723926-28723999)
[»] chr7 (24 HSPs)
chr7 (10-108)||(5529119-5529217)
chr7 (17-97)||(3785635-3785715)
chr7 (12-114)||(25566598-25566700)
chr7 (10-91)||(35570122-35570203)
chr7 (6-63)||(27248749-27248806)
chr7 (10-115)||(30342182-30342286)
chr7 (1-115)||(44732111-44732225)
chr7 (10-97)||(32962757-32962844)
chr7 (7-62)||(36515944-36515999)
chr7 (24-99)||(44594589-44594663)
chr7 (10-108)||(2952558-2952656)
chr7 (2-48)||(3169438-3169484)
chr7 (1-63)||(25931887-25931949)
chr7 (6-96)||(27045476-27045566)
chr7 (1-63)||(38851948-38852010)
chr7 (1-114)||(3851173-3851286)
chr7 (6-63)||(7313002-7313059)
chr7 (11-96)||(8683924-8684009)
chr7 (6-63)||(33376878-33376935)
chr7 (10-108)||(4131562-4131657)
chr7 (3-63)||(7380883-7380943)
chr7 (7-95)||(26203166-26203254)
chr7 (10-114)||(32431408-32431512)
chr7 (1-113)||(46321203-46321315)
[»] chr6 (7 HSPs)
chr6 (18-96)||(31869852-31869930)
chr6 (1-95)||(12226074-12226168)
chr6 (1-95)||(16192951-16193045)
chr6 (1-115)||(24955445-24955559)
chr6 (18-95)||(18877215-18877292)
chr6 (18-76)||(3623802-3623859)
chr6 (18-63)||(10599692-10599737)
[»] chr2 (13 HSPs)
chr2 (6-108)||(22838983-22839085)
chr2 (1-114)||(13125195-13125308)
chr2 (18-108)||(44563054-44563144)
chr2 (2-63)||(38292052-38292113)
chr2 (6-97)||(6125410-6125500)
chr2 (1-63)||(33228543-33228605)
chr2 (11-113)||(38330706-38330807)
chr2 (10-114)||(9172196-9172300)
chr2 (9-115)||(13533036-13533142)
chr2 (1-95)||(32887005-32887099)
chr2 (18-95)||(36177649-36177726)
chr2 (24-91)||(9006855-9006923)
chr2 (18-114)||(13398850-13398945)
[»] scaffold0608 (1 HSPs)
scaffold0608 (1-57)||(1619-1675)
[»] chr3 (15 HSPs)
chr3 (7-63)||(5852558-5852614)
chr3 (10-114)||(22782372-22782476)
chr3 (10-114)||(22786736-22786840)
chr3 (2-61)||(41943314-41943373)
chr3 (2-61)||(42469570-42469629)
chr3 (10-108)||(15332862-15332960)
chr3 (10-84)||(15568015-15568089)
chr3 (1-99)||(21797655-21797753)
chr3 (10-108)||(44801978-44802076)
chr3 (17-99)||(46418011-46418093)
chr3 (1-63)||(33128020-33128082)
chr3 (6-63)||(3020302-3020359)
chr3 (3-60)||(28562234-28562291)
chr3 (24-65)||(49404856-49404897)
chr3 (6-58)||(30057403-30057455)
[»] scaffold0121 (1 HSPs)
scaffold0121 (17-64)||(45998-46045)
[»] scaffold0009 (1 HSPs)
scaffold0009 (6-63)||(216976-217033)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-63)||(71059-71121)


Alignment Details
Target: chr1 (Bit Score: 260; Significance: 1e-145; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 339
Target Start/End: Original strand, 33018970 - 33019309
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggtt 100  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| ||    
T  33018970 attaacatgtaagatattgttcgatttatctcaataaatattttaaaactatcaaatttttatgaacttttattatagataattaaagatattaatgatt 33019069  T
Q  101 aaacttgtacattgaagtaatcgagtgcgacatatttttaagaacggagggagtgcgtgtcattctttt-ctgctgttttctaaatcctttgagtttaag 199  Q
    ||| ||||||||||||||  ||||||||||||||||| |||||||||||||||| |||||||||||||| ||| ||||||||||||||||||| ||| ||    
T  33019070 aaagttgtacattgaagtggtcgagtgcgacatatttataagaacggagggagtacgtgtcattctttttctgttgttttctaaatcctttgatttttag 33019169  T
Q  200 gaaagtggtccttataatatgaatctaaatcaaaggaaataaagtctgtacaaaaatgtcataatgagcatagttagtgatattggaatatataggcatt 299  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||| |||||||||||||||||| |||    
T  33019170 gaaagtggtccttataatatgaatctaaatcaaagcaaataaagtctgtacaaaaatgtcattatgaccatagttagggatattggaatatatagggatt 33019269  T
Q  300 gagattcaaacgtgaaattcaatattgtcgttttggtgtt 339  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  33019270 gagattcaaacgtgaaattcaatattgtcgttttggtgtt 33019309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 31049716 - 31049804
Alignment:
Q  11 aagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggt 99  Q
    ||||| ||||| |||||||||| || |||||||| ||| |||||||||||||| |  |||||||||| |||||| ||||||||||||||    
T  31049716 aagatgttgtttgatttgtctcgatgaatatttttaaaatatcaaatttttataattttttattatatataattaaagatattaatggt 31049804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 12 - 115
Target Start/End: Original strand, 46759227 - 46759330
Alignment:
Q  12 agatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaacttgtaca 111  Q
    |||||||||||||||||||| |||| ||||||| ||| ||| ||| |||||| |  |||||   ||||||||| ||||||||||  |||||| || ||||    
T  46759227 agatattgttcgatttgtctaaatatatatttttaaaatattaaacttttataattttttacattaaataattaaagatattaaaagttaaaattataca 46759326  T
Q  112 ttga 115  Q
    ||||    
T  46759327 ttga 46759330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 31499295 - 31499365
Alignment:
Q  7 atataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattata 77  Q
    ||||||||| |||||||||||| || ||| |||||||| ||| ||| ||||||||||||  ||||||||||    
T  31499295 atataagatgttgttcgatttgccttaatgaatatttttaaaatattaaatttttatgattttttattata 31499365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 24321360 - 24321447
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaag 88  Q
    |||| ||| |||||||||||| |||||||||| | ||||||||| ||| ||| |||||||||| |  ||||||| || ||| ||||||    
T  24321360 attagcatgtaagatattgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattttttattttagatattttaag 24321447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 2246705 - 2246632
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatt 84  Q
    |||||| |||||||||| ||||  ||||||||||| ||| ||| |||||||||| || |||||||||| ||||||    
T  2246705 taagatgttgttcgattagtcttgataaatatttttaaaatattaaatttttat-aatttttattatagataatt 2246632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 3138695 - 3138749
Alignment:
Q  6 catataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttt 60  Q
    |||||||||||| ||| |||||||||| || |||||||| ||| |||||||||||    
T  3138695 catataagatatcgttagatttgtctcgatgaatattttcaaaatatcaaatttt 3138749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 22575741 - 22575643
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaacttgt 108  Q
    |||||| ||||| ||||| | || || | |||||| ||| |||||||||||||| |  |||||||||| ||| || |||||||||||||| ||| ||||    
T  22575741 taagatgttgtttgatttctttcgatgactattttcaaaatatcaaatttttataattttttattatatatacttaaagatattaatggtcaaaattgt 22575643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 40800541 - 40800475
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattat 76  Q
    |||||| ||||| |||||||||| || |||||||| ||| |||||||||||||| |  |||||||||    
T  40800541 taagatgttgtttgatttgtctcgatgaatatttttaaaatatcaaatttttataattttttattat 40800475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 3311663 - 3311703
Alignment:
Q  23 gatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    |||||||||| |||||||||| |||| ||||||||||||||    
T  3311663 gatttgtctcgataaatatttgaaaaatatcaaatttttat 3311703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 4e-20; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 12359974 - 12359877
Alignment:
Q  11 aagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaacttgta 109  Q
    ||||||||||| |||||||||| || |||||||| ||| |||||||||||||| || |||||||||| |||||| |||||||||||||| ||| |||||    
T  12359974 aagatattgtttgatttgtctcgatgaatattttcaaaatatcaaatttttat-aatttttattatacataattaaagatattaatggtcaaagttgta 12359877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 10 - 99
Target Start/End: Complemental strand, 898455 - 898366
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggt 99  Q
    |||||| ||||| |||||||||  ||||||||||| ||| |||||||||||||| |  |||||||||| |||||| ||||||||||||||    
T  898455 taagatgttgtttgatttgtcttgataaatatttttaaaatatcaaatttttataattttttattatatataattaaagatattaatggt 898366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 11761165 - 11761271
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggtt 100  Q
    |||||||| |||||| ||||| ||||||||||||| |||||||| ||| ||||||| |||||| |  |||||||||| |||||| || |||||||||||     
T  11761165 attaacatgtaagatgttgtttgatttgtctcaatcaatatttttaaa-tatcaaaattttataattttttattatatataattaaaaatattaatggtc 11761263  T
Q  101 aaacttgt 108  Q
    ||| ||||    
T  11761264 aaagttgt 11761271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 6996092 - 6996177
Alignment:
Q  14 atattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggt 99  Q
    |||||||| |||||||||| || |||||||| ||| |||||||||||||| |  |||||||||| |||| | ||||||||||||||    
T  6996092 atattgtttgatttgtctcgatgaatattttcaaaatatcaaatttttataattttttattatatataactaaagatattaatggt 6996177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 24916409 - 24916347
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    |||| |||||||||| ||||| ||||||||||||| |||||||| ||| ||||||||||||||    
T  24916409 attagcatataagatgttgtttgatttgtctcaatgaatattttcaaaatatcaaatttttat 24916347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 33587632 - 33587538
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaa 95  Q
    |||||||| |||||| ||||| |||||||||||| ||||||||| ||| ||| |||||||||| |  ||||| | || |||||| ||||||||||    
T  33587632 attaacatgtaagatgttgtttgatttgtctcaacaaatattttcaaaatattaaatttttataattttttactttagataattaaagatattaa 33587538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 40156297 - 40156411
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggtt 100  Q
    |||| ||| |||||| ||||| |||||||||| | ||||||||||||| ||| |||||||||| |  ||||| | || |||||| |||||||||| |||     
T  40156297 attagcatgtaagatgttgtttgatttgtctcgacaaatattttaaaaatattaaatttttataattttttactttagataattaaagatattaacggtc 40156396  T
Q  101 aaacttgtacattga 115  Q
    ||| |||| ||||||    
T  40156397 aaaattgtgcattga 40156411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 43196338 - 43196423
Alignment:
Q  18 tgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaa 103  Q
    |||| ||||||| ||||| |||||||| ||| ||||||||||| || |  |||||||||||||| || ||||||||||| ||||||    
T  43196338 tgtttgatttgtttcaatgaatattttgaaaatatcaaattttcataattttttattataaatagttaaagatattaatagttaaa 43196423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 24992301 - 24992239
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    |||| |||||||||| ||||| ||||||||||||| |||||||| ||| || |||||||||||    
T  24992301 attagcatataagatgttgtttgatttgtctcaatgaatattttcaaaataccaaatttttat 24992239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 108
Target Start/End: Complemental strand, 26387007 - 26386937
Alignment:
Q  37 aatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaacttgt 108  Q
    |||||||| ||| |||||||||||||| || |||||||||| |||||| ||||| ||||| |||||| ||||    
T  26387007 aatatttttaaaatatcaaatttttat-aatttttattatatataattaaagatgttaatagttaaagttgt 26386937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 35290816 - 35290862
Alignment:
Q  17 ttgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    |||||||||||||||| ||||||||||| ||| ||| ||||||||||    
T  35290816 ttgttcgatttgtctcgataaatattttcaaaatattaaatttttat 35290862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 5985042 - 5985099
Alignment:
Q  6 catataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    |||||||||||||||| |||| ||||| || |||||||| ||| ||||||| ||||||    
T  5985042 catataagatattgttggattcgtctcgatcaatattttcaaaatatcaaaattttat 5985099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 18480023 - 18479966
Alignment:
Q  6 catataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    |||||||||| | ||| |||| |||||||| |||||||| ||| ||||||||||||||    
T  18480023 catataagatgtcgttggattcgtctcaatgaatattttcaaaatatcaaatttttat 18479966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 27579584 - 27579499
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaa 95  Q
    ||||||||  || |||||||||||| ||||||||| ||| ||| |||||||||| |  ||||| | || |||||| ||||||||||    
T  27579584 taagatataatttgatttgtctcaacaaatattttcaaaatattaaatttttataattttttactttagataattaaagatattaa 27579499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 115
Target Start/End: Original strand, 34112078 - 34112170
Alignment:
Q  23 gatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaacttgtacattga 115  Q
    |||||||||| | ||||||||| ||| ||| |||||||||| |  ||||| | || |||||| ||||||||||  || ||| |||||||||||    
T  34112078 gatttgtctcgacaaatattttcaaaatattaaatttttataattttttactttagataattaaagatattaaccgtcaaaattgtacattga 34112170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 36240072 - 36239985
Alignment:
Q  7 atataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaa 95  Q
    |||| |||| |||| ||||||||||  ||||||||||| ||| ||||||||||||||   ||||||||||| |||| | || |||||||    
T  36240072 atattagatgttgtacgatttgtcttcataaatatttttaaa-tatcaaatttttatactcttttattatagataaataaaaatattaa 36239985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 20875405 - 20875302
Alignment:
Q  6 catataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaact 105  Q
    |||||||||| ||||| |||||||||| || |||||||| ||| |||||||||||||  |  |||||||||| |||||| |||||||||||||| ||| |    
T  20875405 catataagatgttgtttgatttgtctccatgaatattttcaaaatatcaaatttttactattttttattatatataattaaagatattaatggtcaaagt 20875306  T
Q  106 tgta 109  Q
    ||||    
T  20875305 tgta 20875302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 11794691 - 11794630
Alignment:
Q  2 ttaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    ||||||||||| || |||||||||||||||||||||||||||| ||| ||||||||||||||    
T  11794691 ttaacatataacatgttgttcgatttgtctcaataaatatttttaaaatatcaaatttttat 11794630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 22197870 - 22197957
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatg 97  Q
    |||||| ||||| | ||||||||||| |||||||| ||| |||||||||||||| |  |||||| ||||| ||| |||||||||||||    
T  22197870 taagatgttgtttggtttgtctcaatgaatattttcaaaatatcaaatttttataattttttatcataaaaaatataagatattaatg 22197957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 115
Target Start/End: Original strand, 10550539 - 10550636
Alignment:
Q  18 tgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaacttgtacattga 115  Q
    |||| |||||||||| || |||||||| ||| |||||||||||||| |  |||||||||| |||||| || ||||||||| | ||| ||||| |||||    
T  10550539 tgtttgatttgtctcgatgaatatttttaaaatatcaaatttttataattttttattatatataattaaatatattaatgatcaaagttgtatattga 10550636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 19533981 - 19533924
Alignment:
Q  6 catataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    |||||||||||||||| |||||||||| || |||||||| ||| ||||||||||||||    
T  19533981 catataagatattgttggatttgtctcgatgaatatttttaaaatatcaaatttttat 19533924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 30191635 - 30191574
Alignment:
Q  2 ttaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    ||||||| |||||||||||| |||||||||| ||||||||||| ||| || |||||||||||    
T  30191635 ttaacatgtaagatattgtttgatttgtctcgataaatattttcaaaataccaaatttttat 30191574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 35686515 - 35686619
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaacttgta 109  Q
    |||||| ||||| |||||||||||| ||||||||| ||| ||| || ||||||| |  ||||||| || |||||| |||||||||| ||| ||| ||||     
T  35686515 taagatgttgtttgatttgtctcaacaaatattttcaaaatattaattttttataattttttattttagataattaaagatattaacggtcaaaattgtg 35686614  T
Q  110 cattg 114  Q
    |||||    
T  35686615 cattg 35686619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 50181159 - 50181215
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaat 57  Q
    |||| ||| ||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  50181159 attagcatgtaagatattgttcgatttgtctcaataaatattttcaaaatattaaat 50181215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 25918302 - 25918416
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggtt 100  Q
    |||| ||| |||||| ||||| |||||||||| | |||||| || ||| ||| |||||||||| | | |||| | || |||||| |||||||||| |||     
T  25918302 attagcatgtaagatgttgtttgatttgtctcgacaaatatcttcaaaatattaaatttttataatcctttactttagataattaaagatattaacggtc 25918401  T
Q  101 aaacttgtacattga 115  Q
    ||| |||||||||||    
T  25918402 aaaattgtacattga 25918416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 2571036 - 2570951
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaa 95  Q
    ||||||||  || |||||||||||| ||||||||| ||| ||| |||||||||| |  ||||| | ||||||||| ||||||||||    
T  2571036 taagatataatttgatttgtctcaacaaatatttttaaaatattaaatttttataattttttactttaaataattaaagatattaa 2570951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 6013171 - 6013118
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    |||||| ||||||||||||||| |||||||||||| ||| ||| ||||||||||    
T  6013171 taagattttgttcgatttgtctaaataaatattttcaaaatattaaatttttat 6013118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 9029603 - 9029518
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaa 95  Q
    |||||||||||| |||||||||| | ||||||||| ||| ||| |||||||||| |  ||||| | || |||||| ||||||||||    
T  9029603 taagatattgtttgatttgtctcgacaaatatttttaaaatattaaatttttataattttttactttagataattaaagatattaa 9029518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 30867348 - 30867405
Alignment:
Q  6 catataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    |||||||||||||||| |||||| ||| || |||||||| ||| ||||||||||||||    
T  30867348 catataagatattgttggatttgactcgatgaatatttttaaaatatcaaatttttat 30867405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 4455415 - 4455499
Alignment:
Q  24 atttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaacttgt 108  Q
    ||||||||  || |||||||| ||| |||||||||||||| |  |||||||||| ||||||  ||||||||||||| ||| ||||    
T  4455415 atttgtcttgatgaatattttcaaaatatcaaatttttataatattttattatatataattatagatattaatggtcaaagttgt 4455499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 12 - 63
Target Start/End: Complemental strand, 19903802 - 19903751
Alignment:
Q  12 agatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    |||||||||| ||||||| || ||||||||||| ||| ||||||||||||||    
T  19903802 agatattgtttgatttgtttcgataaatattttcaaaatatcaaatttttat 19903751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 68 - 115
Target Start/End: Original strand, 36118007 - 36118054
Alignment:
Q  68 ttttattataaataatttaagatattaatggttaaacttgtacattga 115  Q
    |||||||||| |||||| ||||||||||||||||||||| || |||||    
T  36118007 ttttattatagataattaaagatattaatggttaaacttatatattga 36118054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 7614723 - 7614809
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaat 96  Q
    |||||| ||||| |||| || || || |||||||| ||| |||||||||||||| |  | |||||||| |||||| |||||||||||    
T  7614723 taagatgttgtttgattcgtttcgatgaatattttcaaaatatcaaatttttataatttcttattatatataattaaagatattaat 7614809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 31010313 - 31010403
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagata 91  Q
    |||| ||| |||||||||||| |||||||||| | ||||||||  ||| ||| |||||||||| |  ||||||| || |||||| ||||||    
T  31010313 attagcatgtaagatattgtttgatttgtctcgacaaatatttctaaaatattaaatttttataattttttattttagataattaaagata 31010403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 36117966 - 36118004
Alignment:
Q  2 ttaacatataagatattgttcgatttgtctcaataaata 40  Q
    |||| |||||||||||||||| |||||||||||||||||    
T  36117966 ttaatatataagatattgttcaatttgtctcaataaata 36118004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 19897737 - 19897814
Alignment:
Q  18 tgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaa 95  Q
    |||| ||||||||||||  |||||||| ||| |||||||| || || || ||||||| || |||||| ||||||||||    
T  19897737 tgtttgatttgtctcaacgaatattttcaaaatatcaaatgttcatcaatttttattttatataattaaagatattaa 19897814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 29586007 - 29585946
Alignment:
Q  2 ttaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    ||||||| ||| || || || ||||| |||||||||||||||| ||| ||||||||||||||    
T  29586007 ttaacatgtaaaatgttttttgatttatctcaataaatatttttaaaatatcaaatttttat 29585946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 99
Target Start/End: Complemental strand, 36523130 - 36523033
Alignment:
Q  2 ttaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggt 99  Q
    ||||||| |||||| ||||||||||| | || |||||||||   ||| ||| |||||||||| |  ||||| | || |||||| ||||||||||||||    
T  36523130 ttaacatgtaagatgttgttcgatttatttcgataaatattcacaaaatattaaatttttataattttttactttagataattcaagatattaatggt 36523033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 53987740 - 53987683
Alignment:
Q  6 catataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    |||||||||| | ||| |||| |||||||||| |||||| ||| ||||||||||||||    
T  53987740 catataagatgtcgttagattcgtctcaataagtattttcaaaatatcaaatttttat 53987683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 20651518 - 20651570
Alignment:
Q  11 aagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    ||||| ||||| |||||||||| ||||||||||| ||| ||| ||||||||||    
T  20651518 aagatgttgttagatttgtctcgataaatatttttaaaatattaaatttttat 20651570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 27977827 - 27977783
Alignment:
Q  17 ttgttcgatttgtctcaataaatattttaaaactatcaaattttt 61  Q
    |||||||||||||||| ||||||||||| ||| ||| ||||||||    
T  27977827 ttgttcgatttgtctcgataaatatttttaaattattaaattttt 27977783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 29052169 - 29052256
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatgg 98  Q
    |||||| ||| | ||||| ||||||| |||||||| ||| |||| |||||| || |  |||||||||| |||||| |||||||||||||    
T  29052169 taagatgttgattgatttatctcaatgaatattttcaaaatatctaatttt-ataattttttattatatataattaaagatattaatgg 29052256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 31293963 - 31294019
Alignment:
Q  7 atataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    ||||||||||||||| ||| |||  ||||||||||||| ||| ||||||| ||||||    
T  31293963 atataagatattgtttgatctgttccaataaatatttttaaaatatcaaaattttat 31294019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 39332311 - 39332251
Alignment:
Q  3 taacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    ||||||||||||| |||||  ||| ||||| ||||||||||| ||| ||| ||||||||||    
T  39332311 taacatataagatgttgttgaattcgtctccataaatatttttaaaatattaaatttttat 39332251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 9e-18; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 18020977 - 18021075
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaacttgt 108  Q
    |||||||||||| |||||||||| || |||||||| ||| ||||||||||||||    |||||||||| |||||| |||||||||||||| ||| ||||    
T  18020977 taagatattgtttgatttgtctcgatgaatattttcaaaatatcaaatttttatatttttttattatatataattaaagatattaatggtcaaagttgt 18021075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 33700227 - 33700129
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaacttgt 108  Q
    |||||| ||||| ||||||||||| | || ||||| ||| |||||||||||||| |  |||||||||| |||||| |||||||||||||| ||| ||||    
T  33700227 taagatgttgtttgatttgtctcagtgaacattttcaaaatatcaaatttttataattttttattatatataattaaagatattaatggtcaaagttgt 33700129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 32855616 - 32855512
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaacttgta 109  Q
    |||||| ||||| |||||||||||||||||||||| ||| |||||||||||||| |  |||| ||||| | |||| | |||||| ||||| ||| ||||     
T  32855616 taagatgttgtttgatttgtctcaataaatatttttaaaatatcaaatttttataattttttgttatataaaattaatgatattgatggtcaaaattgtg 32855517  T
Q  110 cattg 114  Q
    |||||    
T  32855516 cattg 32855512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 8394454 - 8394559
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaacttgta 109  Q
    |||||| ||||| |||||||||| | ||||||||| ||| ||| |||||||||| |  ||||| | || |||||| ||||||||||  |||||| |||||    
T  8394454 taagatgttgtttgatttgtctcgacaaatatttttaaaatattaaatttttataattttttactttagataattaaagatattaacagttaaaattgta 8394553  T
Q  110 cattga 115  Q
    ||||||    
T  8394554 cattga 8394559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 38957269 - 38957382
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggtt 100  Q
    |||| ||| |||||| ||||| |||||||||| | ||||||||||||| ||| |||||||||| |  ||||| | || |||||| |||||||||| |||     
T  38957269 attagcatgtaagatgttgtttgatttgtctcgacaaatattttaaaaatattaaatttttataattttttactttagataattaaagatattaagggtc 38957368  T
Q  101 aaacttgtacattg 114  Q
    ||| |||| |||||    
T  38957369 aaaattgtgcattg 38957382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 92
Target Start/End: Original strand, 18090432 - 18090517
Alignment:
Q  6 catataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatat 92  Q
    |||||||||| |||||||||||||||| ||||||||||| ||| ||| ||| |||||| || ||| | | ||||||||| |||||||    
T  18090432 catataagatgttgttcgatttgtctcgataaatatttttaaaatattaaaattttat-aattttcactttaaataattaaagatat 18090517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 38958924 - 38958810
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggtt 100  Q
    ||||| || |||||| ||||| |||||||||| | ||||||||| ||| ||| |||||||||| |  ||||| | || |||||| ||||||||||| ||     
T  38958924 attaatatgtaagatgttgtttgatttgtctcgacaaatatttttaaaatattaaatttttataactttttactttagataattaaagatattaatagtc 38958825  T
Q  101 aaacttgtacattga 115  Q
    ||| |||| ||||||    
T  38958824 aaaattgtgcattga 38958810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 109
Target Start/End: Original strand, 18035208 - 18035305
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaacttgta 109  Q
    |||||| ||||| |||||||||| || |||||||| ||| |||||| |||||   |  |||||||||| |||||| |||||||||||||| ||| |||||    
T  18035208 taagatgttgtttgatttgtctcgattaatattttcaaaatatcaattttttt--attttttattatatataattaaagatattaatggtcaaagttgta 18035305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 58
Target Start/End: Complemental strand, 35584132 - 35584080
Alignment:
Q  6 catataagatattgttcgatttgtctcaataaatattttaaaactatcaaatt 58  Q
    |||||||||||||||| |||| ||||||||||||||||| ||| ||| |||||    
T  35584132 catataagatattgttagattcgtctcaataaatatttttaaaatattaaatt 35584080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 60
Target Start/End: Original strand, 20671359 - 20671413
Alignment:
Q  6 catataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttt 60  Q
    |||||||||||||||| |||||||||| || | |||||| ||| |||||||||||    
T  20671359 catataagatattgttagatttgtctcgatgagtattttcaaaatatcaaatttt 20671413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 93
Target Start/End: Original strand, 23849715 - 23849805
Alignment:
Q  3 taacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatatt 93  Q
    ||||||||||||| ||||| ||||  |||| ||||||||||| ||| ||||||||||| || |  |||| | |||||| ||| ||||||||    
T  23849715 taacatataagattttgttggattcatctcgataaatatttttaaaatatcaaattttcataattttttctaataaattattaaagatatt 23849805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 26628005 - 26628043
Alignment:
Q  6 catataagatattgttcgatttgtctcaataaatatttt 44  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  26628005 catataagatattgttggatttgtctcgataaatatttt 26628043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 48
Target Start/End: Complemental strand, 40716677 - 40716639
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaa 48  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  40716677 taagatgttgtttgatttgtctcaataaatattttaaaa 40716639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 63
Target Start/End: Original strand, 9632263 - 9632316
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    |||||| ||||| |||||||||| || |||||||| ||| ||||||||||||||    
T  9632263 taagatgttgtttgatttgtctcgatgaatattttcaaaatatcaaatttttat 9632316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 103
Target Start/End: Complemental strand, 11492237 - 11492149
Alignment:
Q  14 atattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaa 103  Q
    ||||||||||||||||||  ||||||||||| ||| ||| |||| ||||| |  ||||||| ||  ||||| |||||||||| |||||||    
T  11492237 atattgttcgatttgtcttgataaatatttttaaa-tattaaatatttataattttttattttagttaattaaagatattaacggttaaa 11492149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 84
Target Start/End: Complemental strand, 28723999 - 28723926
Alignment:
Q  11 aagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatt 84  Q
    ||||| ||||||||||||||||||| | |||||| ||| ||| |||||||||| |  ||||| | |||||||||    
T  28723999 aagatgttgttcgatttgtctcaatgagtattttcaaaatattaaatttttataattttttactgtaaataatt 28723926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 9e-18; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 5529119 - 5529217
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaacttgt 108  Q
    |||||| || || ||||||||||||| |||||||| ||| |||||||||||||| |  |||||||||| |||||| |||||||||||||| ||| ||||    
T  5529119 taagatgttatttgatttgtctcaatcaatattttcaaaatatcaaatttttataattttttattatatataattaaagatattaatggtcaaagttgt 5529217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 17 - 97
Target Start/End: Original strand, 3785635 - 3785715
Alignment:
Q  17 ttgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatg 97  Q
    ||||| |||||||||  ||||||||||| ||| |||||||||||||| | ||||||||||| |||||| ||||||||||||    
T  3785635 ttgtttgatttgtctagataaatatttttaaaatatcaaatttttataatcttttattatatataattaaagatattaatg 3785715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 25566700 - 25566598
Alignment:
Q  12 agatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaacttgtaca 111  Q
    |||| ||||| |||||||||||| ||||||||| ||| ||| |||||||||| | |||||| | || |||||| |||||||||| ||| ||| |||||||    
T  25566700 agatgttgtttgatttgtctcaacaaatatttttaaaatattaaatttttataatcttttactttagataattaaagatattaacggtcaaaattgtaca 25566601  T
Q  112 ttg 114  Q
    |||    
T  25566600 ttg 25566598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 35570203 - 35570122
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagata 91  Q
    |||||| |||| ||||||||||| ||||||||||| ||| |||||||||||||| |  |||||||||| |||||| ||||||    
T  35570203 taagatgttgtacgatttgtctcgataaatattttcaaaatatcaaatttttataattttttattatatataattaaagata 35570122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 27248806 - 27248749
Alignment:
Q  6 catataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    |||||||||||||||| |||| ||||| ||||||||||| ||| ||||||||||||||    
T  27248806 catataagatattgttggattcgtctcgataaatattttcaaaatatcaaatttttat 27248749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 30342182 - 30342286
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaacttgta 109  Q
    |||||| | ||| |||||||||| ||||||||||| ||| ||| |||||||||| |   |||||| || |||| |||||||||||| ||||||| |||||    
T  30342182 taagatgtcgtttgatttgtctcgataaatattttcaaaatattaaatttttataattatttattttagataa-ttaagatattaacggttaaaattgta 30342280  T
Q  110 cattga 115  Q
    ||||||    
T  30342281 cattga 30342286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 44732111 - 44732225
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggtt 100  Q
    |||| ||| |||||| ||||| |||||||||| | ||||||||| ||| ||| |||||||||| |  || || | || |||||| |||||||||| |||     
T  44732111 attagcatgtaagatgttgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattttctactttatataattaaagatattaacggtc 44732210  T
Q  101 aaacttgtacattga 115  Q
    ||| |||||||||||    
T  44732211 aaaattgtacattga 44732225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 10 - 97
Target Start/End: Complemental strand, 32962844 - 32962757
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatg 97  Q
    |||||| ||| ||||||| ||| ||||  |||||| ||| |||||||||||||| |  ||||||||||||| ||| || |||||||||    
T  32962844 taagatgttgctcgatttatcttaatagttatttttaaaatatcaaatttttataattttttattataaatgattaaaaatattaatg 32962757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 62
Target Start/End: Original strand, 36515944 - 36515999
Alignment:
Q  7 atataagatattgttcgatttgtctcaataaatattttaaaactatcaaattttta 62  Q
    ||||||||| |||||| |||||||||||| ||| |||| ||| |||||||||||||    
T  36515944 atataagatgttgttcaatttgtctcaatgaatgttttcaaaatatcaaattttta 36515999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 44594663 - 44594589
Alignment:
Q  24 atttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggt 99  Q
    |||||||||||| | |||||| |||  ||||||||||||| || |||||||||| ||||||  |||||||||||||    
T  44594663 atttgtctcaatgagtattttcaaaaaatcaaatttttat-aatttttattatatataattagagatattaatggt 44594589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 2952558 - 2952656
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaacttgt 108  Q
    |||||| ||| | ||||| ||| ||| |||||||| ||| ||| ||| |||||| |  |||||||||| |||||| |||||||||||||| ||| ||||    
T  2952558 taagatgttgcttgatttttctaaatgaatattttcaaaatattaaaattttataattttttattatatataattaaagatattaatggtcaaagttgt 2952656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 3169438 - 3169484
Alignment:
Q  2 ttaacatataagatattgttcgatttgtctcaataaatattttaaaa 48  Q
    |||| ||||| ||||||||| ||||||||||||| ||||||||||||    
T  3169438 ttaatatatacgatattgtttgatttgtctcaattaatattttaaaa 3169484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 25931887 - 25931949
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    |||||||| |||||| ||||| ||||| | |||||||||||||| ||| ||||||| ||||||    
T  25931887 attaacatgtaagatcttgtttgatttatgtcaataaatattttcaaaatatcaaaattttat 25931949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 96
Target Start/End: Complemental strand, 27045566 - 27045476
Alignment:
Q  6 catataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaat 96  Q
    |||||||||| |||||  ||||| ||| || |||||||| ||| |||||||||||||| |  |||||||| | |||||| || ||||||||    
T  27045566 catataagatgttgtttaatttgcctcgatgaatattttcaaaatatcaaatttttataattttttattacatataattaaatatattaat 27045476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 38852010 - 38851948
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    |||| ||| |||||||||||| |||||||||| | ||||||||| ||| ||| ||||||||||    
T  38852010 attagcatgtaagatattgtttgatttgtctcgacaaatattttcaaaatattaaatttttat 38851948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 3851173 - 3851286
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggtt 100  Q
    |||||||  |||||||||||| |||||||| | | ||||||||| ||| ||  |||||||||| |  ||||||  | ||||||| |||||||||| |||     
T  3851173 attaacacgtaagatattgtttgatttgtcccgacaaatattttcaaaatactaaatttttataattttttatcttgaataattaaagatattaacggtc 3851272  T
Q  101 aaacttgtacattg 114  Q
    ||| |||| |||||    
T  3851273 aaaattgtgcattg 3851286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 7313059 - 7313002
Alignment:
Q  6 catataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    |||||||||||| ||| |||| ||||| || |||||||| ||| ||||||||||||||    
T  7313059 catataagatatcgttggattcgtctcgatgaatattttcaaaatatcaaatttttat 7313002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 8683924 - 8684009
Alignment:
Q  11 aagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaat 96  Q
    ||||| ||||| |||||||||||| ||||||||| ||| ||  |||||||||| |  ||||| | || |||||| |||||||||||    
T  8683924 aagatgttgtttgatttgtctcaacaaatattttcaaaatagtaaatttttataattttttactttagataattaaagatattaat 8684009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Original strand, 33376878 - 33376935
Alignment:
Q  6 catataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    |||||||||| | ||| |||| ||||| ||||||||||| ||| ||||||||||||||    
T  33376878 catataagatgtcgttagattagtctcgataaatattttcaaaatatcaaatttttat 33376935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 4131657 - 4131562
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaacttgt 108  Q
    |||||| ||||| ||||||||||||| |   |||| ||| |||| ||||||||| |  |||||||||| || ||| |||||||||||||| ||| ||||    
T  4131657 taagatgttgtttgatttgtctcaatga---ttttcaaaatatccaatttttataattttttattatatatgattaaagatattaatggtcaaagttgt 4131562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 7380943 - 7380883
Alignment:
Q  3 taacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    |||||| |||||| ||||| ||||| | |||||||||||||| ||| ||||||| ||||||    
T  7380943 taacatgtaagatgttgttggatttatttcaataaatatttttaaaatatcaaacttttat 7380883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 26203166 - 26203254
Alignment:
Q  7 atataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaa 95  Q
    ||||||||| ||||| |||| ||||| || |||||||||||| ||| ||||||| || |  |||| | ||| |||||| ||||||||||    
T  26203166 atataagatgttgttggattcgtctcgatgaatattttaaaaatattaaattttcataattttttctaatatataattaaagatattaa 26203254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 32431512 - 32431408
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaacttgta 109  Q
    |||||| ||||| |||||||||| ||||||||||| ||| | | |||||||||| |  ||||  |||| |||||| |||| ||||| ||| ||| ||||     
T  32431512 taagatgttgtttgatttgtctcgataaatattttcaaaatgttaaatttttataattttttgctatagataattaaagacattaacggtcaaaattgtg 32431413  T
Q  110 cattg 114  Q
    |||||    
T  32431412 cattg 32431408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 46321315 - 46321203
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggtt 100  Q
    |||| ||| |||||| || || |||||||||  ||||||||||| ||| ||| |||||||||| |  ||||| | || |||||| |||||||||| |||     
T  46321315 attagcatgtaagatgttatttgatttgtcttgataaatattttcaaaatattaaatttttataattttttactttagataattaaagatattaacggtc 46321216  T
Q  101 aaacttgtacatt 113  Q
    ||| |||| ||||    
T  46321215 aaaattgtgcatt 46321203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 31869852 - 31869930
Alignment:
Q  18 tgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaat 96  Q
    |||| ||||||||||||| |||||||| ||| |||||||||||||| |  |||||||||| |||||| |||||||||||    
T  31869852 tgtttgatttgtctcaatgaatattttcaaaatatcaaatttttataattttttattatatataattaaagatattaat 31869930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 12226074 - 12226168
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaa 95  Q
    |||| ||| |||||||||||| |||||||||| ||||||||||| ||| ||| |||||||||| |  ||||| | || |||||| ||||||||||    
T  12226074 attagcatgtaagatattgtttgatttgtctcgataaatattttcaaaatattaaatttttataattttttactttagataattaaagatattaa 12226168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 16193045 - 16192951
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaa 95  Q
    |||| ||| |||||| ||||| |||||||||||| ||||||||| ||| ||| |||||||||| |  ||||| | || |||||| ||||||||||    
T  16193045 attagcatgtaagatgttgtttgatttgtctcaacaaatattttcaaaatattaaatttttataattttttactttagataattaaagatattaa 16192951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 24955559 - 24955445
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggtt 100  Q
    |||| ||| |||||| ||||| |||||||||| | ||||||||| ||| ||| |||||||||| |  ||||| | || |||||| ||||||||||| ||     
T  24955559 attagcatgtaagatgttgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattttttactttagataattaaagatattaatagtc 24955460  T
Q  101 aaacttgtacattga 115  Q
    ||| |||| ||||||    
T  24955459 aaaattgtgcattga 24955445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 18877292 - 18877215
Alignment:
Q  18 tgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaa 95  Q
    |||| ||||| | |||||||||||||| ||| |||||||||||||| |  |||||| ||| |||||| ||||||||||    
T  18877292 tgttggatttatttcaataaatattttcaaaatatcaaatttttataactttttataatagataattaaagatattaa 18877215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 3623859 - 3623802
Alignment:
Q  18 tgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattat 76  Q
    |||| ||||||||||||| |||||||| ||| |||||||||||||| || |||||||||    
T  3623859 tgtttgatttgtctcaatgaatatttttaaaatatcaaatttttat-aatttttattat 3623802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 10599692 - 10599737
Alignment:
Q  18 tgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    |||||||||| |||||||||||||||| ||| |||||| |||||||    
T  10599692 tgttcgatttatctcaataaatattttcaaaatatcaattttttat 10599737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 22839085 - 22838983
Alignment:
Q  6 catataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaact 105  Q
    |||||||||| ||||| |||||||||| || |||||||| ||| |||||||||||||| |  |||||||||  |||||| ||||||| |||||| ||| |    
T  22839085 catataagatgttgtttgatttgtctcgatgaatattttcaaaatatcaaatttttataattttttattatctataattaaagatatcaatggtcaaagt 22838986  T
Q  106 tgt 108  Q
    |||    
T  22838985 tgt 22838983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 13125308 - 13125195
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggtt 100  Q
    |||| ||| |||||||||||| |||||||||| ||||||||||| ||| ||| |||||||||| |  ||||| | | ||||||| |||||||||| | |     
T  13125308 attagcatctaagatattgtttgatttgtctcgataaatatttttaaaatattaaatttttataattttttactttgaataattaaagatattaacgatc 13125209  T
Q  101 aaacttgtacattg 114  Q
    ||| ||||||||||    
T  13125208 aaaattgtacattg 13125195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 44563144 - 44563054
Alignment:
Q  18 tgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaacttgt 108  Q
    |||| ||||| |||||||||||||||| ||| |||||||||||||| |  |||||||||| |||||  || ||||||||||| ||| ||||    
T  44563144 tgtttgatttttctcaataaatattttcaaaatatcaaatttttataattttttattatatataatcaaatatattaatggtcaaaattgt 44563054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 38292052 - 38292113
Alignment:
Q  2 ttaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    ||||||| |||||| ||||| ||||||||||||| |||||||| ||| ||||||||||||||    
T  38292052 ttaacatgtaagatgttgtttgatttgtctcaatgaatattttcaaaatatcaaatttttat 38292113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 6125410 - 6125500
Alignment:
Q  6 catataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatg 97  Q
    |||||||||| |||||| |||||| |||||||||||||| ||| ||||||| |||||| || |||||| ||  |||||| | ||||||||||    
T  6125410 catataagatgttgttcaatttgtttcaataaatatttttaaa-tatcaaaattttataaaattttatcattgataattaaggatattaatg 6125500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 33228605 - 33228543
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    ||||| || |||||| |||||||||||||||| ||||||||||| ||| ||| ||||||||||    
T  33228605 attaatatgtaagatgttgttcgatttgtctcgataaatattttcaaaatattaaatttttat 33228543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 113
Target Start/End: Complemental strand, 38330807 - 38330706
Alignment:
Q  11 aagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaacttgtac 110  Q
    ||||| |||||  |||||||||||| |||| ||| ||| |||||| |||||||||  |||||||| |||||||| || ||||||||| | ||| ||||||    
T  38330807 aagatgttgttttatttgtctcaatcaatacttttaaagtatcaa-tttttatgattttttattacaaataattaaatatattaatgatcaaagttgtac 38330709  T
Q  111 att 113  Q
    |||    
T  38330708 att 38330706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 9172300 - 9172196
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaacttgta 109  Q
    |||||| ||||| |||||| ||| ||||||||||| ||| ||| ||| |||||| |  ||||| | || |||||| |||||||||| ||| ||| |||||    
T  9172300 taagatgttgtttgatttgcctcgataaatattttcaaaatattaaacttttataattttttactttagataattaaagatattaacggtcaaaattgta 9172201  T
Q  110 cattg 114  Q
    |||||    
T  9172200 cattg 9172196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 115
Target Start/End: Complemental strand, 13533142 - 13533036
Alignment:
Q  9 ataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttatta-taaataatttaagatattaatggttaaacttg 107  Q
    |||| ||||||||| |||| ||||||  |||||||| ||| |||||| ||||||  ||||||||||| ||||||| | |  |||||||| |||||| |||    
T  13533142 ataaaatattgttcaatttatctcaacgaatatttttaaaatatcaattttttac-aacttttattaataaataactaagaatattaatagttaaaattg 13533044  T
Q  108 tacattga 115  Q
    ||||||||    
T  13533043 tacattga 13533036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 32887005 - 32887099
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaa 95  Q
    |||||||  |||||| || ||| |||| |||  ||||||||||| ||| ||| ||| |||||| || |||||||||| |||||| ||||||||||    
T  32887005 attaacacgtaagatgttattcaatttatcttgataaatattttcaaaatattaaacttttataaatttttattatagataattaaagatattaa 32887099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 36177726 - 36177649
Alignment:
Q  18 tgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaa 95  Q
    |||| ||||||||| |||||||||||| ||| ||| |||||||||| |  ||||| | || |||||| ||||||||||    
T  36177726 tgtttgatttgtctaaataaatatttttaaaatattaaatttttataattttttactttagataattgaagatattaa 36177649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 9006923 - 9006855
Alignment:
Q  24 atttgtctcaataaatattttaaaactatcaaatttttatga-acttttattataaataatttaagata 91  Q
    ||||||||| || |||||||| ||| |||||||||||||| | | |||||||||| |||||| ||||||    
T  9006923 atttgtctcgatcaatattttcaaaatatcaaatttttataatatttttattatatataattgaagata 9006855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 114
Target Start/End: Complemental strand, 13398945 - 13398850
Alignment:
Q  18 tgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaacttgtacattg 114  Q
    |||| ||||||||||  |||||||||| ||| ||||||||||| | ||| |||| | |||||| ||| |||||||| ||| ||||| |||| |||||    
T  13398945 tgttggatttgtctcggtaaatatttttaaaatatcaaattttca-gaatttttttaataaattattaaagatatttatgtttaaaattgttcattg 13398850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 1619 - 1675
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaat 57  Q
    |||| ||| ||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  1619 attagcatgtaagatattgttcgatttgtctcaataaatattttcaaaatattaaat 1675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000008; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 5852614 - 5852558
Alignment:
Q  7 atataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    ||||||||||||||| ||||| |||| ||||||||||| ||| ||||||||||||||    
T  5852614 atataagatattgttggatttatctcgataaatatttttaaattatcaaatttttat 5852558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 22782372 - 22782476
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaacttgta 109  Q
    |||||| ||||| |||||||||  || ||||| || ||| |||||||||||||  ||  ||||||||| |||||| |||||||||||||| ||| ||||     
T  22782372 taagatgttgtttgatttgtcttgatgaatatcttcaaaatatcaaatttttaaaaaaatttattatatataattaaagatattaatggtcaaaattgtg 22782471  T
Q  110 cattg 114  Q
    |||||    
T  22782472 cattg 22782476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 22786736 - 22786840
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaacttgta 109  Q
    |||||| ||||| |||||||||  || ||||| || ||| |||||||||||||  ||  ||||||||| |||||| |||||||||||||| ||| ||||     
T  22786736 taagatgttgtttgatttgtcttgatgaatatcttcaaaatatcaaatttttaaaaaaatttattatatataattaaagatattaatggtcaaaattgtg 22786835  T
Q  110 cattg 114  Q
    |||||    
T  22786836 cattg 22786840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 41943314 - 41943373
Alignment:
Q  2 ttaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaattttt 61  Q
    |||| ||||||||| ||||| ||||||||||||| |||||||| ||| ||||||||||||    
T  41943314 ttaatatataagatgttgtttgatttgtctcaatgaatatttttaaaatatcaaattttt 41943373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 42469629 - 42469570
Alignment:
Q  2 ttaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaattttt 61  Q
    |||||||||||||| ||||||||||||| || ||||||||||| ||| ||| ||||||||    
T  42469629 ttaacatataagatgttgttcgatttgtatcgataaatattttcaaaatattaaattttt 42469570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 108
Target Start/End: Complemental strand, 15332960 - 15332862
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggttaaacttgt 108  Q
    |||||| ||||| |||| ||||| || |||||||||||| |||||||||||| |    |||||||||| |||||| || ||||||||||| ||| ||||    
T  15332960 taagatgttgtttgattggtctcgatgaatattttaaaaatatcaaatttttttatttttttattatatataattaaaaatattaatggtcaaagttgt 15332862  T

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Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 15568089 - 15568015
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatt 84  Q
    ||||||||||||  ||||||||| || |||||||| ||| |||||||||||||| |  |||||||||| ||||||    
T  15568089 taagatattgttttatttgtctcgattaatattttcaaaatatcaaatttttataattttttattatatataatt 15568015  T

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Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 21797655 - 21797753
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggt 99  Q
    |||| ||| |||||| ||||| |||||||||| | ||||||||| ||| ||| |||||||||| |  ||||| | || |||||| ||||||||||||||    
T  21797655 attagcatgtaagatgttgtttgatttgtctcgacaaatattttcaaaatattaaatttttataattttttactttagataattaaagatattaatggt 21797753  T

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Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 44801978 - 44802076
Alignment:
Q  10 taagatattgttcgatttgtctcaataaatattttaaaactatcaaattttt--atgaacttttattataaataatttaagatattaatggttaaacttg 107  Q
    |||||| ||||| ||||||||||||| |||||||| ||| |||||| |||||  ||||  ||||||||||||  ||| |||||||||||||| ||| |||    
T  44801978 taagattttgtttgatttgtctcaattaatatttttaaagtatcaatttttttaatga--ttttattataaaatattaaagatattaatggtcaaaattg 44802075  T

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Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 99
Target Start/End: Complemental strand, 46418093 - 46418011
Alignment:
Q  17 ttgttcgatttgtctcaataaatattttaaaactatcaaatttttatgaacttttattataaataatttaagatattaatggt 99  Q
    ||||| ||||| ||||||| |||||||| ||| |||||||||||||| |  |||||| ||| | |||| ||||||||||||||    
T  46418093 ttgtttgatttttctcaatgaatatttttaaaatatcaaatttttataattttttatcatagagaattaaagatattaatggt 46418011  T

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Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 33128082 - 33128020
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    |||||||| |||||||||||  ||||||| || ||||||||||| ||| ||| ||||||||||    
T  33128082 attaacatgtaagatattgtctgatttgtttcgataaatatttttaaaatattaaatttttat 33128020  T

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Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 3020359 - 3020302
Alignment:
Q  6 catataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    ||||||| || ||||| |||| ||||| ||||||||||| ||| ||||||||||||||    
T  3020359 catataatatgttgtttgattcgtctcgataaatatttttaaaatatcaaatttttat 3020302  T

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Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 28562234 - 28562291
Alignment:
Q  3 taacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttt 60  Q
    |||||| |||||| ||||| |||||||||| || |||||||| ||| |||||||||||    
T  28562234 taacatgtaagatgttgttggatttgtctcgatgaatatttttaaaatatcaaatttt 28562291  T

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Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 49404856 - 49404897
Alignment:
Q  24 atttgtctcaataaatattttaaaactatcaaatttttatga 65  Q
    ||||||||||||||||||||| | | ||||||||||||||||    
T  49404856 atttgtctcaataaatatttttagaatatcaaatttttatga 49404897  T

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Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 30057403 - 30057455
Alignment:
Q  6 catataagatattgttcgatttgtctcaataaatattttaaaactatcaaatt 58  Q
    ||||||||||  |||||||||||||||  | |||||||||||| |||||||||    
T  30057403 catataagatgatgttcgatttgtctcggtcaatattttaaaaatatcaaatt 30057455  T

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Target: scaffold0121 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 46045 - 45998
Alignment:
Q  17 ttgttcgatttgtctcaataaatattttaaaactatcaaatttttatg 64  Q
    |||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  46045 ttgttcgatttgtctcaataaatatttttaaattatcaaatgtttatg 45998  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 217033 - 216976
Alignment:
Q  6 catataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    |||||||||| ||||| ||||||||||||| |||||||| ||| | ||||||||||||    
T  217033 catataagatgttgtttgatttgtctcaatgaatattttcaaaatgtcaaatttttat 216976  T

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Target: scaffold0056 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 71059 - 71121
Alignment:
Q  1 attaacatataagatattgttcgatttgtctcaataaatattttaaaactatcaaatttttat 63  Q
    |||| ||| |||||| ||||| |||||||||||| ||||||||| ||| ||| ||||||||||    
T  71059 attagcatttaagatgttgtttgatttgtctcaacaaatattttcaaaatattaaatttttat 71121  T

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