View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13914_high_12 (Length: 316)
Name: NF13914_high_12
Description: NF13914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13914_high_12 |
 | |
|
Alignment Details
Target: chr2 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 17925556 - 17925856
Alignment:
| Q |
1 |
gcaactgacccaactcctgtggaatttctccaaagaagttgttgtttccaatgtcgagagttttcagaaaagtgagattggaaacatggggagataaaga |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
17925556 |
gcaactgacccaactcctgtggaatttctccaaagaagttgttgtctccaatgtcgagagttttcagaaaagtgagattgcaaacatggggagataaaga |
17925655 |
T |
|
| Q |
101 |
tccatttaactgatatctttctaggctcaactctgtaactcgttcatgcatggggctgcatgtgattccaggccacttgcagaaatggatggaagaattc |
200 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
17925656 |
tccatgtaactgatatctttttaggctcaactctgtaactcgttcatgcatggggctgcatgtgattccatgccacttgcagaaatggatggaagaattc |
17925755 |
T |
|
| Q |
201 |
caagattcaagagcattgtatgggtcactggttattgattctttgaatttgagcaatgccaaatgatcagtttggttttctattgcagccactgccctaa |
300 |
Q |
| |
|
|||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
17925756 |
caagattcaagagctttgtatgggtcactagaaattgattctttgaatttgagcaatgccaaatgatcagtttggtttcctattgcagccactgccctaa |
17925855 |
T |
|
| Q |
301 |
t |
301 |
Q |
| |
|
| |
|
|
| T |
17925856 |
t |
17925856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 253; Significance: 1e-141; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 12897624 - 12897324
Alignment:
| Q |
1 |
gcaactgacccaactcctgtggaatttctccaaagaagttgttgtttccaatgtcgagagttttcagaaaagtgagattggaaacatggggagataaaga |
100 |
Q |
| |
|
||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |
|
|
| T |
12897624 |
gcaactgacccaaatcctgaggaatttctccaaagaagttgttgtctccaatgtcgagagtttccagaaaagtgagattgcaaacatggggagataaaga |
12897525 |
T |
|
| Q |
101 |
tccatttaactgatatctttctaggctcaactctgtaactcgttcatgcatggggctgcatgtgattccaggccacttgcagaaatggatggaagaattc |
200 |
Q |
| |
|
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
12897524 |
tccatgtaactgatatctttttaggctcaactctgtaactcgttcatgcatggggctgcatgtgattccatgccacttgcagaaatggatggaagaattc |
12897425 |
T |
|
| Q |
201 |
caagattcaagagcattgtatgggtcactggttattgattctttgaatttgagcaatgccaaatgatcagtttggttttctattgcagccactgccctaa |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
12897424 |
caagattcaagagcattgtatgggtcactggaaattgattctttgaatttgagcaatgccaaatgatcagtttggtttcctattgcagccaatgccctaa |
12897325 |
T |
|
| Q |
301 |
t |
301 |
Q |
| |
|
| |
|
|
| T |
12897324 |
t |
12897324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 12905245 - 12904945
Alignment:
| Q |
1 |
gcaactgacccaactcctgtggaatttctccaaagaagttgttgtttccaatgtcgagagttttcagaaaagtgagattggaaacatggggagataaaga |
100 |
Q |
| |
|
||||||||||||| ||||| ||||||||||||||||||||||||| | |||||||| | |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12905245 |
gcaactgacccaaatcctgaggaatttctccaaagaagttgttgtctgtaatgtcgacacttttcagaaaagtgagattggaaacatggggagataaaga |
12905146 |
T |
|
| Q |
101 |
tccatttaactgatatctttctaggctcaactctgtaactcgttcatgcatggggctgcatgtgattccaggccacttgcagaaatggatggaagaattc |
200 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
12905145 |
tccatgtaactgatatctttctaggctcaactctgtaactcgttcatgcatggggctgcatgtgattccatgccacttgcagaaatggatggaagaattc |
12905046 |
T |
|
| Q |
201 |
caagattcaagagcattgtatgggtcactggttattgattctttgaatttgagcaatgccaaatgatcagtttggttttctattgcagccactgccctaa |
300 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
12905045 |
caagattcaagagcattgtatgggtcactagttattgattctttgaatttgagcaatgccaaatgatcagtttggtttcctattgcagccactgccgtaa |
12904946 |
T |
|
| Q |
301 |
t |
301 |
Q |
| |
|
| |
|
|
| T |
12904945 |
t |
12904945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 12930335 - 12930035
Alignment:
| Q |
1 |
gcaactgacccaactcctgtggaatttctccaaagaagttgttgtttccaatgtcgagagttttcagaaaagtgagattggaaacatggggagataaaga |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||||| ||||||||||||||||||| |
|
|
| T |
12930335 |
gcaactgacccaactcctgtggaatttctccaaagaagttgttgtctccaatgtcaagagtttccagaaaagtgagattgcaaacatggggagataaaga |
12930236 |
T |
|
| Q |
101 |
tccatttaactgatatctttctaggctcaactctgtaactcgttcatgcatggggctgcatgtgattccaggccacttgcagaaatggatggaagaattc |
200 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
12930235 |
tccatgtaactgatatctttttaggctcaactctgtaactcgttcatgcatggggctacatgtgattccatgccacttgcagaagtggatggaagaattc |
12930136 |
T |
|
| Q |
201 |
caagattcaagagcattgtatgggtcactggttattgattctttgaatttgagcaatgccaaatgatcagtttggttttctattgcagccactgccctaa |
300 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
12930135 |
caagattcaagagtattgtatgggtcactagttattgattctttgaatttgagcaatgccagatgatcagtttgctttcctattgcagccactgccctaa |
12930036 |
T |
|
| Q |
301 |
t |
301 |
Q |
| |
|
| |
|
|
| T |
12930035 |
t |
12930035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 12956137 - 12955837
Alignment:
| Q |
1 |
gcaactgacccaactcctgtggaatttctccaaagaagttgttgtttccaatgtcgagagttttcagaaaagtgagattggaaacatggggagataaaga |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
12956137 |
gcaactgacccaactcctgtggaatttctcctaagaagttgttgtctccaatgtcgagagttttcagaaaagtgagattgcaaacatggggagataaaga |
12956038 |
T |
|
| Q |
101 |
tccatttaactgatatctttctaggctcaactctgtaactcgttcatgcatggggctgcatgtgattccaggccacttgcagaaatggatggaagaattc |
200 |
Q |
| |
|
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
12956037 |
tccatgtaactgatatctttttaggctcaactctgtaactcgttcatgcatggggctgcatgtgattccttgccacttgcagaaatggatggaagaattc |
12955938 |
T |
|
| Q |
201 |
caagattcaagagcattgtatgggtcactggttattgattctttgaatttgagcaatgccaaatgatcagtttggttttctattgcagccactgccctaa |
300 |
Q |
| |
|
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||| ||| |
|
|
| T |
12955937 |
caagattcaagagcattgtatgggtcacttgaaattgattctttgaatttgagcaatgccaaatgatcagtttggtttcctattgcagtcattgccttaa |
12955838 |
T |
|
| Q |
301 |
t |
301 |
Q |
| |
|
| |
|
|
| T |
12955837 |
t |
12955837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 12946700 - 12946403
Alignment:
| Q |
1 |
gcaactgacccaactcctgtggaatttctccaaagaagttgttgtttccaatgtcgagagttttcagaaaagtgagattggaaacatggggagataaaga |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12946700 |
gcaactgacccaactcctgtggaatttctccaaagaagttgttgtctccaatgttgagtgttttcagaaaagtgagattggaaacatggggagataaaga |
12946601 |
T |
|
| Q |
101 |
tccatttaactgatatctttctaggctcaactctgtaactcgttcatgcatggggctgcatgtgattccaggccacttgcagaaatggatggaagaattc |
200 |
Q |
| |
|
||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||| |||||| |
|
|
| T |
12946600 |
tccatgtaactgatatctttctagagtcaactgtgtaactcgttcatgcatggggctgcatgtgattccatgccacttgcagaagtgaatggatgaattc |
12946501 |
T |
|
| Q |
201 |
caagattcaagagcattgtatgggtcactggttattgattctttgaatttgagcaatgccaaatgatcagtttggttttctattgcagccactgccct |
298 |
Q |
| |
|
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
12946500 |
caagattcaagagctttgtatgggtcactggaaattgattctttgaatttgagcaatgccaaatgatcagtttggtttcctattgcagccactgccct |
12946403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 182 - 301
Target Start/End: Complemental strand, 12955678 - 12955559
Alignment:
| Q |
182 |
gaaatggatggaagaattccaagattcaagagcattgtatgggtcactggttattgattctttgaatttgagcaatgccaaatgatcagtttggttttct |
281 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
12955678 |
gaaatggatggaagaattccaagattcaagagcattgtatgggtcactagaaattgattctttgaatttgagcaatgccaaatgatcagtttggtttcct |
12955579 |
T |
|
| Q |
282 |
attgcagccactgccctaat |
301 |
Q |
| |
|
||||||| ||||||| |||| |
|
|
| T |
12955578 |
attgcagtcactgccgtaat |
12955559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 156; Significance: 7e-83; HSPs: 16)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 9 - 296
Target Start/End: Original strand, 10719056 - 10719343
Alignment:
| Q |
9 |
cccaactcctgtggaatttctccaaagaagttgttgtttccaatgtcgagagttttcagaaaagtgagattggaaacatggggagataaagatccattta |
108 |
Q |
| |
|
|||||||| ||||||||||||||||||||| |||||||| || | ||| || ||| ||| | ||||||| ||||||||||||||||||||||| || |
|
|
| T |
10719056 |
cccaactcatgtggaatttctccaaagaagctgttgtttataagattgaggtttatcaaaaaggagagattgccaacatggggagataaagatccatgta |
10719155 |
T |
|
| Q |
109 |
actgatatctttctaggctcaactctgtaactcgttcatgcatggggctgcatgtgattccaggccacttgcagaaatggatggaagaattccaagattc |
208 |
Q |
| |
|
|| |||||| | ||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
10719156 |
acagatatcctcctaggttcaactctgtaactctttcatgcatggggctgcatgtgattccatgccacttgcagaagtggatggaagaattccaagattc |
10719255 |
T |
|
| Q |
209 |
aagagcattgtatgggtcactggttattgattctttgaatttgagcaatgccaaatgatcagtttggttttctattgcagccactgcc |
296 |
Q |
| |
|
|||||| | ||||| |||||||||||| |||||||||||||||||||||| |||||||| |||||||| ||| ||||||||||||| |
|
|
| T |
10719256 |
aagagcttcatatggatcactggttattcattctttgaatttgagcaatgctaaatgatctgtttggttacctaatgcagccactgcc |
10719343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 10563086 - 10562791
Alignment:
| Q |
1 |
gcaactgacccaactcctgtggaatttctccaaagaagttgttgtttccaatgtcgagagttttcagaaaagtgagattggaaacatggggagataaaga |
100 |
Q |
| |
|
||||||||||||||||| |||| ||||||||| | || | |||||||||| ||||||| || ||| ||| ||||||||| ||||| |||||||||||| |
|
|
| T |
10563086 |
gcaactgacccaactccggtgggatttctccagaaaaactattgtttccaaggtcgagatttatcaaaaaggtgagattgccaacatagggagataaaga |
10562987 |
T |
|
| Q |
101 |
tccatttaactgatatctttctaggctcaactctgtaactcgttcatgcatggggctgcatgtgattccaggccacttgcagaaatggatggaagaattc |
200 |
Q |
| |
|
||||| ||| |||| ||| |||| |||||||| |||||| || |||||||||| |||| |||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
10562986 |
tccatgtaagtgattacttcttaggttcaactctataactctttgatgcatggggttgcaagtgattccctgccacttgcagaagtggatggaagaattc |
10562887 |
T |
|
| Q |
201 |
caagattcaagagcattgtatgggtcactggttattgattctttgaatttgagcaatgccaaatgatcagtttggttttctattgcagccactgcc |
296 |
Q |
| |
|
||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||||| |
|
|
| T |
10562886 |
caagattcaagagcattgtatggatcactggatattgattctttgaatttgagcaatgctaaatgatctgtttggtttcctaatgcagccactgcc |
10562791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 10749165 - 10749460
Alignment:
| Q |
1 |
gcaactgacccaactcctgtggaatttctccaaagaagttgttgtttccaatgtcgagagttttcagaaaagtgagattggaaacatggggagataaaga |
100 |
Q |
| |
|
||||| |||||||||| | ||| |||||||||| ||||| ||||||||||||| ||| || | ||||||||||||||| ||||||||| |||||||| |
|
|
| T |
10749165 |
gcaaccgacccaactcttctgggatttctccaaggaagtcattgtttccaatgtttagatttgtgagaaaagtgagattgccaacatggggtgataaaga |
10749264 |
T |
|
| Q |
101 |
tccatttaactgatatctttctaggctcaactctgtaactcgttcatgcatggggctgcatgtgattccaggccacttgcagaaatggatggaagaattc |
200 |
Q |
| |
|
||||| ||| ||||||| ||||| | |||||| |||||||| |||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
10749265 |
tccatgtaaatgatatccttctaagttcaactttgtaactctttcatgcatgggtttgcatgtgattccatgccacttgcagaagtggatggaagaattc |
10749364 |
T |
|
| Q |
201 |
caagattcaagagcattgtatgggtcactggttattgattctttgaatttgagcaatgccaaatgatcagtttggttttctattgcagccactgcc |
296 |
Q |
| |
|
|||||||||||||| || | ||||||||| | |||||||||||| |||||| |||||||||||||||| ||||||||| ||| ||||||||||||| |
|
|
| T |
10749365 |
caagattcaagagctttatttgggtcactcgatattgattctttaaatttgtgcaatgccaaatgatctgtttggtttcctaatgcagccactgcc |
10749460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 10765265 - 10765560
Alignment:
| Q |
1 |
gcaactgacccaactcctgtggaatttctccaaagaagttgttgtttccaatgtcgagagttttcagaaaagtgagattggaaacatggggagataaaga |
100 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| | || | |||||| || || |||| || |||||||||||||||| || || |||||||||||| |
|
|
| T |
10765265 |
gcaactgaccgaactcctgtggaatttctccagaaaaactattgttttgaaggttgagatttatcagaaaagtgagattaccaagatagggagataaaga |
10765364 |
T |
|
| Q |
101 |
tccatttaactgatatctttctaggctcaactctgtaactcgttcatgcatggggctgcatgtgattccaggccacttgcagaaatggatggaagaattc |
200 |
Q |
| |
|
||||| ||||||||||| | ||||| ||||||||||||| | || ||||||| ||||||||||||||||| ||||||| || || ||||||||||||||| |
|
|
| T |
10765365 |
tccatgtaactgatatcctgctaggttcaactctgtaaccctttgatgcatgaggctgcatgtgattccatgccactttcaaaagtggatggaagaattc |
10765464 |
T |
|
| Q |
201 |
caagattcaagagcattgtatgggtcactggttattgattctttgaatttgagcaatgccaaatgatcagtttggttttctattgcagccactgcc |
296 |
Q |
| |
|
|||||||||||||| || ||||| ||||| | |||||||||||||||||||||||||||||| ||||| | ||||||| ||| | |||||||||| |
|
|
| T |
10765465 |
caagattcaagagctttatatggatcacttgatattgattctttgaatttgagcaatgccaattgatctgattggtttcctaattgagccactgcc |
10765560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 1 - 296
Target Start/End: Original strand, 10742852 - 10743147
Alignment:
| Q |
1 |
gcaactgacccaactcctgtggaatttctccaaagaagttgttgtttccaatgtcgagagttttcagaaaagtgagattggaaacatggggagataaaga |
100 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| |||| |||||||| ||| | ||| || ||||||||||||||||| ||||||||| |||||| |
|
|
| T |
10742852 |
gcaactgacccaactcttgtggaatttctccatagaatgtgttgttttcaagtttgagttttatcagaaaagtgagattgccaacatggggggataaacg |
10742951 |
T |
|
| Q |
101 |
tccatttaactgatatctttctaggctcaactctgtaactcgttcatgcatggggctgcatgtgattccaggccacttgcagaaatggatggaagaattc |
200 |
Q |
| |
|
||| | ||| |||| ||| ||||| ||||||| |||||| || |||||||||| |||||||||||||| |||||||||||| ||||||||||||||| |
|
|
| T |
10742952 |
tccttgtaagcgataacttcctaggtccaactctataactctttgatgcatggggttgcatgtgattccataccacttgcagaagtggatggaagaattc |
10743051 |
T |
|
| Q |
201 |
caagattcaagagcattgtatgggtcactggttattgattctttgaatttgagcaatgccaaatgatcagtttggttttctattgcagccactgcc |
296 |
Q |
| |
|
||||| |||||||| || ||||| ||||| | |||||||||||||||||||||||||||||||||||| | ||||||| ||| | |||||||||| |
|
|
| T |
10743052 |
caagactcaagagctttatatggatcacttgatattgattctttgaatttgagcaatgccaaatgatctgattggtttcctaattgagccactgcc |
10743147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 68 - 278
Target Start/End: Original strand, 11050089 - 11050299
Alignment:
| Q |
68 |
aaaagtgagattggaaacatggggagataaagatccatttaactgatatctttctaggctcaactctgtaactcgttcatgcatggggctgcatgtgatt |
167 |
Q |
| |
|
||||||||||||| ||||| ||| |||| ||||||| |||||||||| ||||||| |||||| |||||||| || ||||||| |||||||||||||| |
|
|
| T |
11050089 |
aaaagtgagattgccaacatagggtgatattgatccatgcaactgatatccttctaggttcaactttgtaactctttgatgcatgaggctgcatgtgatt |
11050188 |
T |
|
| Q |
168 |
ccaggccacttgcagaaatggatggaagaattccaagattcaagagcattgtatgggtcactggttattgattctttgaatttgagcaatgccaaatgat |
267 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||| | ||||| |||||||||||| | |||||| ||||||| |
|
|
| T |
11050189 |
ccatgccacttgcagaaatggatggaagaattccaagattcaagagctccatttgggtcacggtatattgtttctttgaatttaatcaatgcaaaatgat |
11050288 |
T |
|
| Q |
268 |
cagtttggttt |
278 |
Q |
| |
|
| ||||||||| |
|
|
| T |
11050289 |
ctgtttggttt |
11050299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 134 - 278
Target Start/End: Original strand, 9838611 - 9838755
Alignment:
| Q |
134 |
tgtaactcgttcatgcatggggctgcatgtgattccaggccacttgcagaaatggatggaagaattccaagattc-aaga--gcattgtatgggtcactg |
230 |
Q |
| |
|
|||||||| || |||||||||| |||||||||||||| |||| |||||||| ||||| |||||||||||||| || |||| |||| |||||||||| |
|
|
| T |
9838611 |
tgtaactctttgatgcatggggttgcatgtgattccatgccagttgcagaagtggatagaagaattccaagaatctaagactccatt---tgggtcactg |
9838707 |
T |
|
| Q |
231 |
gttattgattctttgaatttgagcaatgccaaatgatcagtttggttt |
278 |
Q |
| |
|
| ||||||||||||||||| ||||||||| | |||||||||||||||| |
|
|
| T |
9838708 |
gatattgattctttgaattggagcaatgcaagatgatcagtttggttt |
9838755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 99 - 278
Target Start/End: Complemental strand, 10609671 - 10609492
Alignment:
| Q |
99 |
gatccatttaactgatatctttctaggctcaactctgtaactcgttcatgcatggggctgcatgtgattccaggccacttgcagaaatggatggaagaat |
198 |
Q |
| |
|
||||||| |||||||||| ||| ||| |||||||| |||||| || ||||| | ||||||||||| |||| ||||||| || |||||||||||| ||| |
|
|
| T |
10609671 |
gatccatgcaactgatatccttcaaggttcaactctataactctttgttgcatagagctgcatgtgactccacgccacttacataaatggatggaaaaat |
10609572 |
T |
|
| Q |
199 |
tccaagattc-aaga--gcattgtatgggtcactggttattgattctttgaatttgagcaatgccaaatgatcagtttggttt |
278 |
Q |
| |
|
||||||| || |||| |||| ||| ||| ||| |||||||||||||||||| ||||||| ||||| ||||||||||||| |
|
|
| T |
10609571 |
tccaagaatctaagactccatt---tggatcattggatattgattctttgaatttaagcaatgacaaataatcagtttggttt |
10609492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 157 - 278
Target Start/End: Complemental strand, 10548706 - 10548585
Alignment:
| Q |
157 |
tgcatgtgattccaggccacttgcagaaatggatggaagaattccaagattcaagagcattgtatg--ggtcactggttattgattctttgaatttgagc |
254 |
Q |
| |
|
|||| ||||||||| |||| ||||| |||||||| ||| ||||||||| ||||| |||| |||| ||||||||||||| ||||| |||||||| ||| |
|
|
| T |
10548706 |
tgcacgtgattccatgccagttgcaaaaatggatagaaccattccaagaatcaag--cattctatgtgggtcactggttatagattccttgaatttaagc |
10548609 |
T |
|
| Q |
255 |
aatgccaaatgatcagtttggttt |
278 |
Q |
| |
|
|||| | |||||||||||||||| |
|
|
| T |
10548608 |
aatgatagatgatcagtttggttt |
10548585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 280
Target Start/End: Complemental strand, 10592788 - 10592727
Alignment:
| Q |
219 |
tatgggtcactggttattgattctttgaatttgagcaatgccaaatgatcagtttggttttc |
280 |
Q |
| |
|
|||||||| |||| ||| || || ||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
10592788 |
tatgggtcgctggatatagactccttgaatttgagcaatgccagatgatcagtttggttttc |
10592727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 184
Target Start/End: Complemental strand, 7190994 - 7190878
Alignment:
| Q |
68 |
aaaagtgagattggaaacatggggagataaagatccatttaactgatatctttctaggctcaactctgtaactcgttcatgcatggggctgcatgtgatt |
167 |
Q |
| |
|
||||| ||||||| |||||||||||||| |||||| | |||||||| ||| | | | ||||| | ||||| || ||||||||| |||||||||||| |
|
|
| T |
7190994 |
aaaagagagattgccaacatggggagatatcaatccatgcagctgatatccttccaagtttaactcggcaactctttgatgcatgggactgcatgtgatt |
7190895 |
T |
|
| Q |
168 |
ccaggccacttgcagaa |
184 |
Q |
| |
|
||| |||||||||||| |
|
|
| T |
7190894 |
ccataccacttgcagaa |
7190878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 10556853 - 10556769
Alignment:
| Q |
127 |
tcaactctgtaactcgttcatgcatggggctgcatgtgattccaggccacttgcagaaatggatggaagaattccaagattcaag |
211 |
Q |
| |
|
||||||| ||||||| || |||||||| | |||||||||||||| ||| ||||| |||||||| ||| ||||||||| ||||| |
|
|
| T |
10556853 |
tcaactcagtaactctttgatgcatggtgttgcatgtgattccataccagttgcaaaaatggatagaaccattccaagaatcaag |
10556769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 181
Target Start/End: Original strand, 19608127 - 19608195
Alignment:
| Q |
113 |
atatctttctaggctcaactctgtaactcgttcatgcatggggctgcatgtgattccaggccacttgca |
181 |
Q |
| |
|
||||| || |||| |||| ||| |||||| || ||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
19608127 |
atatccttgtaggttcaattctataactctttgatgcatggggctgcatgtgattccatgccaattgca |
19608195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 278
Target Start/End: Original strand, 10590795 - 10590854
Alignment:
| Q |
219 |
tatgggtcactggttattgattctttgaatttgagcaatgccaaatgatcagtttggttt |
278 |
Q |
| |
|
||||||||||| | |||| ||| ||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
10590795 |
tatgggtcactagatattaattgcttgaattggagcaatgccaaatgatcggtttggttt |
10590854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11050022 - 11050067
Alignment:
| Q |
1 |
gcaactgacccaactcctgtggaatttctccaaagaagttgttgtt |
46 |
Q |
| |
|
||||| |||||||||| ||||||||||||||| ||||| ||||||| |
|
|
| T |
11050022 |
gcaaccgacccaactcttgtggaatttctccatagaagctgttgtt |
11050067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 278
Target Start/End: Complemental strand, 10578921 - 10578789
Alignment:
| Q |
146 |
atgcatggggctgcatgtgattccaggccacttgcagaaatggatggaagaattccaagattcaagagcattgtatgggtcactggttattgattctttg |
245 |
Q |
| |
|
|||| |||| |||||| |||||||||||| ||||| || ||| | |||| ||||||||| || ||| | ||||| ||||| | |||||||| ||| |
|
|
| T |
10578921 |
atgcttgggactgcatacgattccaggccatttgcaaaagtgggttgaagcattccaagaatctagaataccatatggatcactagatattgattgcttg |
10578822 |
T |
|
| Q |
246 |
aatttgagcaatgccaaatgatcagtttggttt |
278 |
Q |
| |
|
|||| |||||| || |||||||| ||||||||| |
|
|
| T |
10578821 |
aattggagcaaagcgaaatgatcggtttggttt |
10578789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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