View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13914_high_13 (Length: 288)
Name: NF13914_high_13
Description: NF13914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13914_high_13 |
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Alignment Details
Target: chr5 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 41443109 - 41443375
Alignment:
| Q |
1 |
caaggtcaaaaataagtaatgtttataaacgtacatctatgtatgacaatttttctgaatggcataaatggatctccattcataaataaaattctaaaga |
100 |
Q |
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| T |
41443109 |
caaggtcaaaaataagtaatgtttataaacgtacatctatgtatgacaatttttctgaatgacataaatggatctccattcataaataaaattctaaaga |
41443208 |
T |
|
| Q |
101 |
aaacacaatgtaataaagttatatcacttagaacagtaacttcaagttagaatatgaaacaggtttgaactctacatcttattttaagattaaattattg |
200 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41443209 |
aaacacaatgtaataaagttatatcaattagaacagtaacttcaagttagaatatgaaacaggtttgaactctacatcttattttaagattaaattattg |
41443308 |
T |
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| Q |
201 |
catattatgaactctatatgtgacggataaacaaatcatattttaaacgatctttatagttgaactt |
267 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41443309 |
catattatgaactctatatgtgacggataaacaaatcatattttaaacgatctttatagttgaactt |
41443375 |
T |
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