View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13914_high_7 (Length: 433)
Name: NF13914_high_7
Description: NF13914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13914_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 64 - 418
Target Start/End: Complemental strand, 45651108 - 45650755
Alignment:
| Q |
64 |
tgatatctaatccctactatattcaaggagtaggtttgaatatattgagcatggcccgtgtttatcttcctttagcaaagattctaagcattcccacgta |
163 |
Q |
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| T |
45651108 |
tgatatctaatccctactatattcaaggagtaggtttgaatatattgagcatggcccgtgtttatcttcctttagcaaagattctaagcattcccacgta |
45651009 |
T |
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| Q |
164 |
ctcacatacctaacgtgtaccattcttcttcttataagcatgcatactgttgttcacaggcggcttcttaattatttcattctatattcaaaatctataa |
263 |
Q |
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| T |
45651008 |
ctcacatacctaacgtgtaccattcttcttcttataagcat----actgttgttcacaggcggcttcttaattatttcattctatattcaaaatctataa |
45650913 |
T |
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| Q |
264 |
acaaaagtagttaacatgtcactgcggtataattaatggataagcttttgaatgattgaagagcaagttttgtttatgagttcatatactaaagaaatta |
363 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45650912 |
acaaaagtagttaacatgtcactgcggtataattaatggataagcttttgaatgattgaagagcaagttttgtttatgagttcatatactaaagaaatta |
45650813 |
T |
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| Q |
364 |
aaaggcatctaagctgtttaatttgcaaga----ataggtcattggcgtcagaacaaac |
418 |
Q |
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| T |
45650812 |
aaaggcatctaagc-gtttaatttgcaagaatatataggtcattggcgtcagaacaaac |
45650755 |
T |
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