View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13916_high_1 (Length: 1102)

Name: NF13916_high_1
Description: NF13916
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13916_high_1
NF13916_high_1
[»] chr6 (20 HSPs)
chr6 (475-814)||(29100772-29101111)
chr6 (475-814)||(29062836-29063175)
chr6 (475-814)||(29117690-29118029)
chr6 (475-605)||(29120620-29120750)
chr6 (951-1055)||(29915652-29915756)
chr6 (948-1055)||(23936519-23936626)
chr6 (948-1055)||(34439344-34439451)
chr6 (362-419)||(29063457-29063514)
chr6 (362-415)||(29101397-29101450)
chr6 (362-419)||(29118311-29118368)
chr6 (362-415)||(29121036-29121089)
chr6 (948-1055)||(26669034-26669140)
chr6 (966-1055)||(29927318-29927406)
chr6 (984-1055)||(12828653-12828723)
chr6 (1053-1101)||(29914754-29914802)
chr6 (948-1019)||(32258858-32258929)
chr6 (974-1019)||(19689809-19689854)
chr6 (837-880)||(2810114-2810157)
chr6 (984-1019)||(30627227-30627262)
chr6 (966-1019)||(8052480-8052533)
[»] chr1 (33 HSPs)
chr1 (948-1055)||(1430472-1430579)
chr1 (951-1055)||(1428976-1429080)
chr1 (948-1055)||(5317513-5317620)
chr1 (966-1055)||(84472-84560)
chr1 (972-1055)||(43105562-43105644)
chr1 (971-1055)||(24040983-24041066)
chr1 (966-1055)||(6332277-6332365)
chr1 (966-1055)||(30006240-30006328)
chr1 (966-1055)||(43929794-43929882)
chr1 (968-1055)||(11650168-11650254)
chr1 (966-1045)||(40060860-40060938)
chr1 (966-1055)||(10690909-10690997)
chr1 (968-1055)||(52403586-52403672)
chr1 (966-1055)||(37437357-37437446)
chr1 (966-1055)||(28751362-28751450)
chr1 (983-1056)||(45749470-45749542)
chr1 (966-1055)||(48259817-48259905)
chr1 (966-1055)||(43755138-43755225)
chr1 (966-1055)||(50349811-50349905)
chr1 (683-741)||(4259802-4259860)
chr1 (683-741)||(4263424-4263482)
chr1 (970-1055)||(2245898-2245982)
chr1 (966-1054)||(44583883-44583969)
chr1 (966-1055)||(48319959-48320043)
chr1 (984-1023)||(6377258-6377297)
chr1 (841-896)||(38040350-38040405)
chr1 (841-896)||(49944852-49944907)
chr1 (953-1019)||(50158259-50158325)
chr1 (855-896)||(1811279-1811320)
chr1 (966-1055)||(12002356-12002444)
chr1 (966-1055)||(15698704-15698793)
chr1 (837-882)||(34662715-34662760)
chr1 (972-1045)||(43738214-43738286)
[»] chr8 (25 HSPs)
chr8 (948-1055)||(27109756-27109863)
chr8 (964-1055)||(6839317-6839407)
chr8 (968-1056)||(32737874-32737961)
chr8 (984-1055)||(22601245-22601315)
chr8 (961-1055)||(7612608-7612700)
chr8 (966-1055)||(38329009-38329096)
chr8 (966-1055)||(9022506-9022594)
chr8 (837-890)||(13831430-13831483)
chr8 (948-1055)||(2067810-2067916)
chr8 (968-1019)||(24732093-24732144)
chr8 (984-1055)||(30789045-30789115)
chr8 (968-1055)||(36915475-36915561)
chr8 (952-1055)||(11335979-11336075)
chr8 (837-890)||(24915239-24915292)
chr8 (966-1055)||(45187250-45187338)
chr8 (972-1019)||(2812921-2812968)
chr8 (984-1055)||(41790113-41790183)
chr8 (961-1019)||(32061408-32061466)
chr8 (966-1055)||(11257650-11257737)
chr8 (966-1055)||(32326679-32326767)
chr8 (847-890)||(3236355-3236398)
chr8 (966-1019)||(3095467-3095520)
chr8 (855-896)||(10184639-10184680)
chr8 (859-896)||(10839782-10839819)
chr8 (841-890)||(42123040-42123089)
[»] chr5 (22 HSPs)
chr5 (948-1055)||(15400282-15400389)
chr5 (948-1055)||(14979987-14980093)
chr5 (948-1055)||(31557276-31557383)
chr5 (948-1055)||(4967427-4967533)
chr5 (966-1055)||(12167564-12167652)
chr5 (966-1055)||(36660536-36660624)
chr5 (953-1055)||(31889830-31889931)
chr5 (966-1055)||(43257814-43257902)
chr5 (966-1055)||(166603-166691)
chr5 (966-1060)||(34919841-34919934)
chr5 (966-1055)||(36783466-36783554)
chr5 (837-896)||(1138287-1138346)
chr5 (837-896)||(27488366-27488425)
chr5 (951-1055)||(4011599-4011702)
chr5 (1025-1056)||(32963020-32963051)
chr5 (966-1019)||(4371496-4371549)
chr5 (966-1019)||(4751484-4751537)
chr5 (970-1015)||(24436498-24436543)
chr5 (837-890)||(26327561-26327614)
chr5 (978-1023)||(33741768-33741813)
chr5 (855-888)||(34297262-34297295)
chr5 (859-896)||(38394447-38394484)
[»] chr3 (33 HSPs)
chr3 (966-1055)||(647546-647634)
chr3 (970-1055)||(2567970-2568054)
chr3 (972-1055)||(40048985-40049067)
chr3 (953-1055)||(26965449-26965550)
chr3 (970-1055)||(1340887-1340971)
chr3 (966-1055)||(27483147-27483235)
chr3 (966-1055)||(38457571-38457659)
chr3 (948-1048)||(34059983-34060082)
chr3 (961-1055)||(5244696-5244788)
chr3 (966-1055)||(44648364-44648453)
chr3 (967-1055)||(2662447-2662534)
chr3 (968-1055)||(38165617-38165703)
chr3 (966-1055)||(31290928-31291015)
chr3 (970-1055)||(35239472-35239556)
chr3 (966-1055)||(36771530-36771618)
chr3 (970-1055)||(37225553-37225637)
chr3 (951-1055)||(790183-790286)
chr3 (972-1055)||(45095639-45095723)
chr3 (972-1048)||(53716121-53716196)
chr3 (837-896)||(49885398-49885457)
chr3 (970-1055)||(44854426-44854508)
chr3 (966-1055)||(83406-83494)
chr3 (966-1055)||(46362964-46363052)
chr3 (948-1055)||(25061806-25061910)
chr3 (948-1055)||(43600126-43600234)
chr3 (984-1055)||(43736842-43736911)
chr3 (966-1055)||(43580588-43580678)
chr3 (948-1055)||(19552642-19552749)
chr3 (972-1019)||(4392041-4392088)
chr3 (837-896)||(29457909-29457968)
chr3 (841-896)||(54537462-54537517)
chr3 (855-896)||(5177853-5177894)
chr3 (966-1019)||(42857045-42857098)
[»] chr2 (35 HSPs)
chr2 (948-1055)||(4840663-4840769)
chr2 (966-1055)||(24775299-24775387)
chr2 (948-1055)||(40410553-40410659)
chr2 (966-1055)||(7743511-7743599)
chr2 (970-1055)||(34225860-34225944)
chr2 (970-1055)||(1298738-1298822)
chr2 (966-1055)||(40987236-40987324)
chr2 (987-1055)||(1381849-1381916)
chr2 (966-1055)||(37106972-37107062)
chr2 (948-1055)||(4766153-4766254)
chr2 (984-1055)||(36360347-36360417)
chr2 (966-1055)||(14378202-14378290)
chr2 (948-1055)||(43460883-43460986)
chr2 (966-1019)||(44228611-44228664)
chr2 (967-1055)||(11171853-11171940)
chr2 (969-1048)||(29795156-29795234)
chr2 (841-896)||(32457287-32457342)
chr2 (837-896)||(45571049-45571108)
chr2 (837-896)||(45574716-45574775)
chr2 (837-896)||(45578383-45578442)
chr2 (837-896)||(45582050-45582109)
chr2 (837-896)||(45585717-45585776)
chr2 (837-896)||(45589384-45589443)
chr2 (837-896)||(45593051-45593110)
chr2 (837-896)||(45596718-45596777)
chr2 (837-896)||(45600385-45600444)
chr2 (837-896)||(45604052-45604111)
chr2 (837-896)||(45607719-45607778)
chr2 (837-896)||(45611386-45611445)
chr2 (837-896)||(45615053-45615112)
chr2 (844-890)||(7943516-7943562)
chr2 (844-887)||(9152456-9152499)
chr2 (984-1022)||(6592098-6592136)
chr2 (859-896)||(28249025-28249062)
chr2 (850-887)||(38449021-38449058)
[»] chr4 (34 HSPs)
chr4 (969-1055)||(34360112-34360197)
chr4 (961-1055)||(43421076-43421169)
chr4 (964-1056)||(32140941-32141032)
chr4 (948-1055)||(34096123-34096229)
chr4 (948-1055)||(56422938-56423044)
chr4 (950-1055)||(52732698-52732802)
chr4 (964-1055)||(51737277-51737365)
chr4 (971-1055)||(39671068-39671151)
chr4 (984-1055)||(37445767-37445837)
chr4 (948-1055)||(44855351-44855457)
chr4 (972-1055)||(51930683-51930765)
chr4 (966-1055)||(21045240-21045328)
chr4 (966-1055)||(36805407-36805495)
chr4 (970-1055)||(45520419-45520503)
chr4 (966-1055)||(54512130-54512218)
chr4 (984-1055)||(15501129-15501199)
chr4 (966-1055)||(42672496-42672584)
chr4 (972-1055)||(19849191-19849273)
chr4 (948-1043)||(31817138-31817232)
chr4 (837-896)||(55190736-55190795)
chr4 (961-1043)||(3093467-3093548)
chr4 (966-1054)||(56556236-56556320)
chr4 (966-1019)||(29840197-29840250)
chr4 (856-896)||(16412253-16412293)
chr4 (971-1055)||(38761788-38761871)
chr4 (948-1039)||(50072374-50072467)
chr4 (855-890)||(10306456-10306491)
chr4 (837-896)||(20459310-20459369)
chr4 (973-1055)||(29289852-29289936)
chr4 (1000-1055)||(35928596-35928650)
chr4 (837-896)||(47866055-47866114)
chr4 (966-1016)||(30492865-30492915)
chr4 (970-1019)||(45903377-45903426)
chr4 (859-896)||(53225736-53225773)
[»] chr7 (26 HSPs)
chr7 (966-1055)||(34002086-34002175)
chr7 (959-1055)||(18886756-18886851)
chr7 (966-1055)||(3680877-3680965)
chr7 (966-1055)||(17869348-17869436)
chr7 (951-1055)||(36447550-36447653)
chr7 (951-1055)||(41905874-41905977)
chr7 (974-1055)||(34733420-34733500)
chr7 (972-1055)||(28044101-28044183)
chr7 (984-1055)||(42259521-42259591)
chr7 (970-1043)||(26527356-26527428)
chr7 (983-1022)||(30833066-30833105)
chr7 (841-896)||(36245450-36245505)
chr7 (837-887)||(16861540-16861590)
chr7 (970-1055)||(33056242-33056327)
chr7 (1001-1055)||(40207379-40207432)
chr7 (966-1055)||(32275306-32275394)
chr7 (973-1049)||(32873127-32873203)
chr7 (971-1055)||(22627313-22627396)
chr7 (837-896)||(27231903-27231962)
chr7 (841-896)||(28677391-28677446)
chr7 (841-896)||(45533249-45533304)
chr7 (855-896)||(4925910-4925951)
chr7 (837-890)||(28020070-28020123)
chr7 (966-1019)||(40298984-40299037)
chr7 (990-1055)||(42010553-42010617)
chr7 (966-1055)||(42121653-42121741)
[»] scaffold0072 (1 HSPs)
scaffold0072 (970-1055)||(12040-12123)
[»] scaffold0119 (1 HSPs)
scaffold0119 (948-1055)||(1653-1759)
[»] scaffold0580 (2 HSPs)
scaffold0580 (948-1049)||(1690-1790)
scaffold0580 (948-1049)||(9429-9529)
[»] scaffold0238 (1 HSPs)
scaffold0238 (966-1055)||(15994-16081)
[»] scaffold0189 (1 HSPs)
scaffold0189 (966-1019)||(13022-13075)
[»] scaffold0194 (1 HSPs)
scaffold0194 (948-1019)||(8294-8365)


Alignment Details
Target: chr6 (Bit Score: 268; Significance: 1e-149; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 475 - 814
Target Start/End: Complemental strand, 29101111 - 29100772
Alignment:
Q  475 caggttcattgcaggtggaggacttggccgcacacgtacttgcagtttgtcgctaatcaagtcacagttcgtgggtgcaatcacggaaactatatgtgca 574  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||| ||||||||||||||||||||||||||    
T  29101111 caggtgcattgcaggtggaggacttggccgcacacgtacttgcagtttgtccctaatcaagtcggagttcgtgtgtgcaatcacggaaactatatgtgca 29101012  T
Q  575 tgaatgctatgcatgcgagctcaagaaataacaaatcatctcggaataatacagctgtataatgaaggtgcagggcacggaacgagagtataagatccag 674  Q
    |||||  |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  29101011 tgaatattatgcatgcgagctcatgaaataaaaaatcatctcggaataacacagctgtataatgaaggtgcagggcacggaaccagagtatacgatccag 29100912  T
Q  675 aatgggtaaaaccgaactaatattcaatgcatttccatattcaacaaatcatcaaacataagcttatgcaacccctggaacactctcaaccagcatgata 774  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29100911 aatgggtaaaaccgaactaatattcaatacatttccatattcaacaaatcatcaaacataagcttatgcaaccccttgaacactctcaaccagcatgata 29100812  T
Q  775 tattaatatctgtcctccttccatattaagaaagaatcta 814  Q
    |||||||||||| |||||| ||||| |||||||| |||||    
T  29100811 tattaatatctggcctcctaccatactaagaaaggatcta 29100772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 475 - 814
Target Start/End: Complemental strand, 29063175 - 29062836
Alignment:
Q  475 caggttcattgcaggtggaggacttggccgcacacgtacttgcagtttgtcgctaatcaagtcacagttcgtgggtgcaatcacggaaactatatgtgca 574  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||| ||||||||||||||||||||||||||    
T  29063175 caggtgcattgcaggtggaggacttggccgcacacgtacttgcagtttgtccctaatcaagtcggagttcgtgtgtgcaatcacggaaactatatgtgca 29063076  T
Q  575 tgaatgctatgcatgcgagctcaagaaataacaaatcatctcggaataatacagctgtataatgaaggtgcagggcacggaacgagagtataagatccag 674  Q
    |||||  |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||| |||||||    
T  29063075 tgaatattatgcatgcgagctcatgaaataaaaaatcatctcggaataacacagctgtataatgaaggtgcagggcacgaaaccagagtatacgatccag 29062976  T
Q  675 aatgggtaaaaccgaactaatattcaatgcatttccatattcaacaaatcatcaaacataagcttatgcaacccctggaacactctcaaccagcatgata 774  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29062975 aatgggtaaaaccgaactaatattcaatacatttccatattcaacaaatcatcaaacataagcttatgcaaccccttgaacactctcaaccagcatgata 29062876  T
Q  775 tattaatatctgtcctccttccatattaagaaagaatcta 814  Q
    ||||||||| || |||||| ||||| |||||||| |||||    
T  29062875 tattaatatatggcctcctaccatactaagaaaggatcta 29062836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 475 - 814
Target Start/End: Complemental strand, 29118029 - 29117690
Alignment:
Q  475 caggttcattgcaggtggaggacttggccgcacacgtacttgcagtttgtcgctaatcaagtcacagttcgtgggtgcaatcacggaaactatatgtgca 574  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||| ||||||||||||||||||||||||||    
T  29118029 caggtgcattgcaggtggaggacttggccgcacacgtacttgcagtttgtccctaatcaagtcggagttcgtgtgtgcaatcacggaaactatatgtgca 29117930  T
Q  575 tgaatgctatgcatgcgagctcaagaaataacaaatcatctcggaataatacagctgtataatgaaggtgcagggcacggaacgagagtataagatccag 674  Q
    |||||  |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||| |||||||    
T  29117929 tgaatattatgcatgcgagctcatgaaataaaaaatcatctcggaataacacagctgtataatgaaggtgcagggcacgaaaccagagtatacgatccag 29117830  T
Q  675 aatgggtaaaaccgaactaatattcaatgcatttccatattcaacaaatcatcaaacataagcttatgcaacccctggaacactctcaaccagcatgata 774  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29117829 aatgggtaaaaccgaactaatattcaatacatttccatattcaacaaatcatcaaacataagcttatgcaaccccttgaacactctcaaccagcatgata 29117730  T
Q  775 tattaatatctgtcctccttccatattaagaaagaatcta 814  Q
    ||||||||| || |||||| ||||| |||||||| |||||    
T  29117729 tattaatatgtggcctcctaccatactaagaaaggatcta 29117690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 475 - 605
Target Start/End: Complemental strand, 29120750 - 29120620
Alignment:
Q  475 caggttcattgcaggtggaggacttggccgcacacgtacttgcagtttgtcgctaatcaagtcacagttcgtgggtgcaatcacggaaactatatgtgca 574  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  |||||||| ||||||||||||||||||||||||||    
T  29120750 caggtgcattgcaggtggaggacttggccgcacacgtacttgcagtttgtccctaatcaagtcggagttcgtgtgtgcaatcacggaaactatatgtgca 29120651  T
Q  575 tgaatgctatgcatgcgagctcaagaaataa 605  Q
    |||||  |||||||||||||||| |||||||    
T  29120650 tgaatattatgcatgcgagctcatgaaataa 29120620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 9e-33
Query Start/End: Original strand, 951 - 1055
Target Start/End: Complemental strand, 29915756 - 29915652
Alignment:
Q  951 gttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaac 1050  Q
    |||||||| ||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||  |||||||||||||||||||||||||    
T  29915756 gttttaggtgttggcacacatattaagaaattgaatgaaataataattagaaataacacttttactaaactgccatttactttataagaaaaagacaaac 29915657  T
Q  1051 ttaaa 1055  Q
     ||||    
T  29915656 ataaa 29915652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 948 - 1055
Target Start/End: Original strand, 23936519 - 23936626
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagaca 1047  Q
    ||||||||||| ||||| ||||| |||||||||| |||||||||||| ||||||||||||| ||||||| |||||| ||||||||||||||||||| |||    
T  23936519 gtcgttttaggtgttgggacacatattaagaaatggaatgaaataatcattagatataacatttttactgaattgccctttactttataagaaaaaaaca 23936618  T
Q  1048 aacttaaa 1055  Q
    || |||||    
T  23936619 aatttaaa 23936626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 948 - 1055
Target Start/End: Original strand, 34439344 - 34439451
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagaca 1047  Q
    ||||||||||| ||||  ||| | ||||||||||  ||||||||||| ||||||||||||| ||||| |||||||| ||||| |||||||||||||||||    
T  34439344 gtcgttttaggtgttgacacataaattaagaaatgaaatgaaataatcattagatataacatttttattaaattgccctttattttataagaaaaagaca 34439443  T
Q  1048 aacttaaa 1055  Q
    ||| ||||    
T  34439444 aacataaa 34439451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 362 - 419
Target Start/End: Complemental strand, 29063514 - 29063457
Alignment:
Q  362 aactttgggactgattgcttgttcaaattacaatacagtaacaaatactttcctcttt 419  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29063514 aactttgggactgattgcttgttcaaattacaatacagtaagaaatactttcctcttt 29063457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 29101450 - 29101397
Alignment:
Q  362 aactttgggactgattgcttgttcaaattacaatacagtaacaaatactttcct 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29101450 aactttgggactgattgcttgttcaaattacaatacagtaacaaatactttcct 29101397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 362 - 419
Target Start/End: Complemental strand, 29118368 - 29118311
Alignment:
Q  362 aactttgggactgattgcttgttcaaattacaatacagtaacaaatactttcctcttt 419  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29118368 aactttgggactgattgcttgttcaaattacaatacagtaagaaatactttcctcttt 29118311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 29121089 - 29121036
Alignment:
Q  362 aactttgggactgattgcttgttcaaattacaatacagtaacaaatactttcct 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29121089 aactttgggactgattgcttgttcaaattacaatacagtaacaaatactttcct 29121036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 948 - 1055
Target Start/End: Original strand, 26669034 - 26669140
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagaca 1047  Q
    |||| ||||||| || | ||| ||||||||||||  ||||||||||| ||| ||||||||  |||||||||||||| | |||||||||||||||||||||    
T  26669034 gtcgctttaggctttagcacaaagattaagaaatataatgaaataattattggatataacgtttttactaaattgc-ccttactttataagaaaaagaca 26669132  T
Q  1048 aacttaaa 1055  Q
    || |||||    
T  26669133 aaattaaa 26669140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 966 - 1055
Target Start/End: Complemental strand, 29927406 - 29927318
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||||| |||| |||||||||||| |||||| ||||||||||||||||  |   | |||||||||||||||||||||||||||||    
T  29927406 acacagattaaaaaatagaatgaaataatcattagacataacacttttactaacat-atccttactttataagaaaaagacaaacttaaa 29927318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 984 - 1055
Target Start/End: Original strand, 12828653 - 12828723
Alignment:
Q  984 aatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||||| |||||| ||||||||||||||||| ||| | |||||||||||||||||||||| ||||||    
T  12828653 aatgaaataatcattagacataacacttttactaaactgc-ccttactttataagaaaaagacaagcttaaa 12828723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 1053 - 1101
Target Start/End: Complemental strand, 29914802 - 29914754
Alignment:
Q  1053 aaataatagctacatttcaattaatggacacctttgcttctccatctac 1101  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||    
T  29914802 aaataatagctatatttcaattaatggacacctttgcttctacatctac 29914754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 948 - 1019
Target Start/End: Complemental strand, 32258929 - 32258858
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaa 1019  Q
    |||| ||||||| |||  |||||||||||||||| || ||||||||| ||| |||||||| |||||||||||    
T  32258929 gtcgctttaggctttgacacacagattaagaaatcgattgaaataatcattggatataacgcttttactaaa 32258858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 974 - 1019
Target Start/End: Original strand, 19689809 - 19689854
Alignment:
Q  974 taagaaattgaatgaaataataattagatataacacttttactaaa 1019  Q
    |||||||| |||||||||||| ||||||||||||| ||||||||||    
T  19689809 taagaaatggaatgaaataattattagatataacaattttactaaa 19689854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 837 - 880
Target Start/End: Complemental strand, 2810157 - 2810114
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaa 880  Q
    ||||||||||||||| | ||||||||||| ||||||||||||||    
T  2810157 ctatttctagactaggtacatcaattattgaatgaatctaaaaa 2810114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 984 - 1019
Target Start/End: Complemental strand, 30627262 - 30627227
Alignment:
Q  984 aatgaaataataattagatataacacttttactaaa 1019  Q
    ||||||||||| ||||||||||||||||||||||||    
T  30627262 aatgaaataatcattagatataacacttttactaaa 30627227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 966 - 1019
Target Start/End: Complemental strand, 8052533 - 8052480
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaa 1019  Q
    ||||| ||||||||||  ||||||||||| |||||| |||||||||||| ||||    
T  8052533 acacaaattaagaaatgaaatgaaataatcattagacataacacttttattaaa 8052480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 1e-41; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 1e-41
Query Start/End: Original strand, 948 - 1055
Target Start/End: Original strand, 1430472 - 1430579
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagaca 1047  Q
    ||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  1430472 gtcgttttaggtgttggcacacagattaagaaatttaatgaaataataattagatataacacttttactaaactgcactttactttataagaaaaagaca 1430571  T
Q  1048 aacttaaa 1055  Q
    ||||||||    
T  1430572 aacttaaa 1430579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 951 - 1055
Target Start/End: Complemental strand, 1429080 - 1428976
Alignment:
Q  951 gttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaac 1050  Q
    |||||||| ||||  ||| | ||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||| |||||||    
T  1429080 gttttaggtgttgacacatatattaagaaattgaatgaaataattattagatataacacttttactaaactgccctttactttataagaaaaggacaaac 1428981  T
Q  1051 ttaaa 1055  Q
    |||||    
T  1428980 ttaaa 1428976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 948 - 1055
Target Start/End: Original strand, 5317513 - 5317620
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagaca 1047  Q
    ||||||||||||  | ||||| |||||||| |||  ||||||||||| |||||| ||||||||||||||||||||| | ||| |||||||||||||||||    
T  5317513 gtcgttttaggcaatagtacatagattaaggaatgaaatgaaataatcattagacataacacttttactaaattgccccttattttataagaaaaagaca 5317612  T
Q  1048 aacttaaa 1055  Q
    ||||||||    
T  5317613 aacttaaa 5317620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 966 - 1055
Target Start/End: Original strand, 84472 - 84560
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||||||||| |||||||||||||||| |||||| ||||||||||||||||| ||  | |||||||||||||||||||||||||||||    
T  84472 acacagattaaggaattgaatgaaataatcattagacataacacttttactaaaatg-tccttactttataagaaaaagacaaacttaaa 84560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 972 - 1055
Target Start/End: Original strand, 43105562 - 43105644
Alignment:
Q  972 attaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||| | | ||| |||||||||||||||||||||||||    
T  43105562 attaagaaattgaatgaaataatcattagacataacacttttactaaattac-cattattttataagaaaaagacaaacttaaa 43105644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 971 - 1055
Target Start/End: Original strand, 24040983 - 24041066
Alignment:
Q  971 gattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||| ||| |||||||||||| |||||| ||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  24040983 gattaaggaatggaatgaaataatcattagacataacacttttactaaactgc-ccttactttataagaaaaagacaaacttaaa 24041066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 966 - 1055
Target Start/End: Complemental strand, 6332365 - 6332277
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||||||||||||| ||| ||||  |||||| ||||||||||||| ||||    
T  6332365 acacaaattaagaaattgaatgaaataatcattagacataacacttttactaaactgc-ctttgttttatatgaaaaagacaaacataaa 6332277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 966 - 1055
Target Start/End: Complemental strand, 30006328 - 30006240
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||||||||  |||||||||||||||| |||||| |||||||| |||||||||||| | ||||||||||||||||||| ||| |||||    
T  30006328 acacagattaatgaattgaatgaaataatcattagacataacactattactaaattgctc-ttactttataagaaaaagataaatttaaa 30006240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 966 - 1055
Target Start/End: Complemental strand, 43929882 - 43929794
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||||||||||| | | | | |||||||||||||||||||| ||||||||    
T  43929882 acacaaattaagaaattgaatgaaataatcattagacataacacttttactatacttc-cattactttataagaaaaagactaacttaaa 43929794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 968 - 1055
Target Start/End: Complemental strand, 11650254 - 11650168
Alignment:
Q  968 acagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||||||||||||||||||||  ||||||||||  | |||||||||| ||| | |||||||| ||||||||||||||||||||    
T  11650254 acagattaagaaattgaatgaaataaccattagatatagtatttttactaaactgc-ccttactttaaaagaaaaagacaaacttaaa 11650168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 966 - 1045
Target Start/End: Original strand, 40060860 - 40060938
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaaga 1045  Q
    ||||| ||||||||||  ||||||||||| |||||| ||||||||||||||||||||| | |||||||||||||||||||    
T  40060860 acacatattaagaaatgaaatgaaataatgattagacataacacttttactaaattgc-ccttactttataagaaaaaga 40060938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 966 - 1055
Target Start/End: Original strand, 10690909 - 10690997
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||| ||||||||||  ||||||||||| ||||||||||||| |||||||||| ||| | ||||||  |||||||||||||||||||||    
T  10690909 acacatattaagaaatgaaatgaaataatcattagatataacatttttactaaactgcac-ttacttcgtaagaaaaagacaaacttaaa 10690997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 968 - 1055
Target Start/End: Complemental strand, 52403672 - 52403586
Alignment:
Q  968 acagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||||||||||| |||||||||||| ||| ||||||||||| ||| |||| ||| | |||||||||||| |||||||||| |||||    
T  52403672 acagattaagaaatggaatgaaataatcattggatataacactgttattaaactgc-ccttactttataaggaaaagacaaaattaaa 52403586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 966 - 1055
Target Start/End: Original strand, 37437357 - 37437446
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacactttt-actaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||| |||||| |||  ||||||||| | |||||| ||||||||||| |||||||||| ||| |||||||||||||||||||||||||||    
T  37437357 acacatattaaggaatgaaatgaaatattcattagacataacactttttactaaattgccctt-actttataagaaaaagacaaacttaaa 37437446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 966 - 1055
Target Start/End: Original strand, 28751362 - 28751450
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||||||||| |||  ||| ||||||| |||||| |||||| |||||||||| ||| | |||||||||||||||| ||||||||||||    
T  28751362 acacagattaaggaatgaaataaaataatcattagacataacatttttactaaactgc-ccttactttataagaaaaggacaaacttaaa 28751450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 983 - 1056
Target Start/End: Original strand, 45749470 - 45749542
Alignment:
Q  983 gaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaat 1056  Q
    |||| ||||||| |||||| |||||||||||||||||  || ||| ||||||||||||||||||||||||||||    
T  45749470 gaataaaataatcattagacataacacttttactaaaccgccctt-actttataagaaaaagacaaacttaaat 45749542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 966 - 1055
Target Start/End: Original strand, 48259817 - 48259905
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||||||||| ||| ||||||||||||  ||||| |||||||||||| |||| ||| | || |||||||||||||||| |||||||||    
T  48259817 acacagattaaggaatagaatgaaataatcgttagacataacacttttattaaactgc-ccttgctttataagaaaaagataaacttaaa 48259905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 966 - 1055
Target Start/End: Complemental strand, 43755225 - 43755138
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||||   ||| ||||||||||||||||| | | |||||||||||||||| || ||| |||| ||||||||||||||||||||||    
T  43755225 acacagattacagaatggaatgaaataataattaaaaa-aacacttttactaaatcgccctt-acttaataagaaaaagacaaacttaaa 43755138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 966 - 1055
Target Start/End: Original strand, 50349811 - 50349905
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttact------ttataagaaaaagacaaacttaaa 1055  Q
    ||||| |||||| ||| |||||||||||| |||||| ||||||||||||||||| ||| | |||||      ||||||||||||||||||||||||    
T  50349811 acacaaattaaggaatggaatgaaataatcattagacataacacttttactaaactgc-ccttactttataattataagaaaaagacaaacttaaa 50349905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 683 - 741
Target Start/End: Complemental strand, 4259860 - 4259802
Alignment:
Q  683 aaaccgaactaatattcaatgcatttccatattcaacaaatcatcaaacataagcttat 741  Q
    ||||| |||||||||||||||||||  |||||||||| |||| || |||||||||||||    
T  4259860 aaaccaaactaatattcaatgcattctcatattcaaccaatcttccaacataagcttat 4259802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 683 - 741
Target Start/End: Complemental strand, 4263482 - 4263424
Alignment:
Q  683 aaaccgaactaatattcaatgcatttccatattcaacaaatcatcaaacataagcttat 741  Q
    ||||| |||||||||||||||||||  |||||||||| |||| || |||||||||||||    
T  4263482 aaaccaaactaatattcaatgcattctcatattcaaccaatcttccaacataagcttat 4263424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 970 - 1055
Target Start/End: Complemental strand, 2245982 - 2245898
Alignment:
Q  970 agattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||||||||| ||||||| |||| |||| | |||| | |||||||||| ||  | || ||||||||||||||||||||||||||    
T  2245982 agattaagaaatggaatgaagtaatcattaaacataatatttttactaaactgt-cattcctttataagaaaaagacaaacttaaa 2245898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 966 - 1054
Target Start/End: Complemental strand, 44583969 - 44583883
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaa 1054  Q
    ||||| ||||||||||  ||| ||||||| |||||| |||||| |||| ||||| |||   ||| ||||||||||||||||||||||||    
T  44583969 acacaaattaagaaatgaaataaaataatcattagacataacaattttcctaaactgcc--ttattttataagaaaaagacaaacttaa 44583883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 966 - 1055
Target Start/End: Original strand, 48319959 - 48320043
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||| |||||||||| |||||||    | |||||| |||| |||||||||||||||| ||| ||||||||| | |||||||||||||||    
T  48319959 acacatattaagaaatggaatgaa----tcattagacataagacttttactaaattgccctt-actttataaaagaaagacaaacttaaa 48320043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 984 - 1023
Target Start/End: Original strand, 6377258 - 6377297
Alignment:
Q  984 aatgaaataataattagatataacacttttactaaattgc 1023  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  6377258 aatgaaataatcattagacataacacttttactaaattgc 6377297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 841 - 896
Target Start/End: Original strand, 38040350 - 38040405
Alignment:
Q  841 ttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||| |||| ||||||||| | ||||||||||||||||||| |||| |||||    
T  38040350 ttctagacaagatacatcaattaatcaatgaatctaaaaagtcaaatttttcttat 38040405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 841 - 896
Target Start/End: Complemental strand, 49944907 - 49944852
Alignment:
Q  841 ttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||| |||| ||||||||||| |||||||||||||||| || |||| |||||    
T  49944907 ttctagacaagatacatcaattattcaatgaatctaaaaagttaaatttttcttat 49944852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 953 - 1019
Target Start/End: Original strand, 50158259 - 50158325
Alignment:
Q  953 tttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaa 1019  Q
    ||||||| |||  ||| ||||||||||||  |||| |||||| ||| ||||||||||||||||||||    
T  50158259 tttaggctttgacacatagattaagaaatataatgcaataatcattggatataacacttttactaaa 50158325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 855 - 896
Target Start/End: Original strand, 1811279 - 1811320
Alignment:
Q  855 catcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||||||||||||||||||||| | ||||||| |||||    
T  1811279 catcaattatttaatgaatctaaaaaatgaatttttgcttat 1811320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 966 - 1055
Target Start/End: Complemental strand, 12002444 - 12002356
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||| |||||| |||  ||||||||||| || ||| |||| |||||||||||| ||| | ||  |||||| ||||||||||||||||||    
T  12002444 acacatattaaggaatgaaatgaaataatcatcagacataatacttttactaaactgc-ccttgttttatatgaaaaagacaaacttaaa 12002356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 966 - 1055
Target Start/End: Original strand, 15698704 - 15698793
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||| |||||| |||  ||| ||||||| |||||| |||||||||| | |||| | |  | |||||||||||||||||| |||||||||    
T  15698704 acacaaattaaggaataaaattaaataatcattagacataacactttaaataaactaccatgtactttataagaaaaagataaacttaaa 15698793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 837 - 882
Target Start/End: Complemental strand, 34662760 - 34662715
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagt 882  Q
    |||||||||| |||| | ||||||||||| ||||||||||||||||    
T  34662760 ctatttctaggctaggtacatcaattattgaatgaatctaaaaagt 34662715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 972 - 1045
Target Start/End: Original strand, 43738214 - 43738286
Alignment:
Q  972 attaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaaga 1045  Q
    ||||||||||  ||| ||||||| |||||| |||| | |||||||||| | | |||||||||||||||||||||    
T  43738214 attaagaaatgaaataaaataattattagacataatatttttactaaactac-ctttactttataagaaaaaga 43738286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 3e-32; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 948 - 1055
Target Start/End: Original strand, 27109756 - 27109863
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagaca 1047  Q
    ||||||||||| ||||| ||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||   ||||||||||||||||| ||||    
T  27109756 gtcgttttaggtgttggcacacatattaagaaatagaatgaaataatcattagatataacacttttactaaattgtcttttactttataagaaaaggaca 27109855  T
Q  1048 aacttaaa 1055  Q
    ||||||||    
T  27109856 aacttaaa 27109863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 964 - 1055
Target Start/End: Complemental strand, 6839407 - 6839317
Alignment:
Q  964 gtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||||||| |||| |||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  6839407 gtacacagattaaaaaatggaatgaaataatcattagacataacacttttactaaattgc-ctttactttataagaaaaagacaaacataaa 6839317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 968 - 1056
Target Start/End: Complemental strand, 32737961 - 32737874
Alignment:
Q  968 acagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaat 1056  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||  |||| ||| ||||||||||||||||||||| ||||||||||    
T  32737961 acagattaagaaattgaatgaaata-tcattagatataacacttttgttaaactgccctttactttataagaaaaagaaaaacttaaat 32737874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 984 - 1055
Target Start/End: Complemental strand, 22601315 - 22601245
Alignment:
Q  984 aatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||||| |||||| ||||| ||||||||||||||  |||||||||||||||||||||||||||||||    
T  22601315 aatgaaataatcattagacataactcttttactaaattgt-ctttactttataagaaaaagacaaacttaaa 22601245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 961 - 1055
Target Start/End: Complemental strand, 7612700 - 7612608
Alignment:
Q  961 ttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||| |||||||||||||||| |||||||||||| ||| |||||||| | ||||||||| ||| | ||||||||||||||||||||||| |||||    
T  7612700 ttggcacacagattaagaaatagaatgaaataatcattggatataacgc-tttactaaactgc-ccttactttataagaaaaagacaaaattaaa 7612608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 966 - 1055
Target Start/End: Original strand, 38329009 - 38329096
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||||||||| ||| |||||||||||| |||||| ||||||||||||||||| |  || |||||||||||  ||||||||||||||||    
T  38329009 acacagattaaggaatggaatgaaataatcattagacataacacttttactaaact--gccttactttataatcaaaagacaaacttaaa 38329096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 966 - 1055
Target Start/End: Complemental strand, 9022594 - 9022506
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||||| |||| ||||||| |||| |||||| ||||||||||||||||| ||| | ||  |||||| ||||||||||||||||||    
T  9022594 acacagattaaaaaatggaatgaattaatcattagacataacacttttactaaactgcac-ttgttttatatgaaaaagacaaacttaaa 9022506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 837 - 890
Target Start/End: Original strand, 13831430 - 13831483
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagtcaattttt 890  Q
    |||||| ||||||| || ||||||||||||||||||||||||||||||||||||    
T  13831430 ctatttttagactaaatacatcaattatttaatgaatctaaaaagtcaattttt 13831483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 948 - 1055
Target Start/End: Complemental strand, 2067916 - 2067810
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagaca 1047  Q
    |||| ||||||| |||  ||| |||||||||||| |||||||||||| ||| |||||||| |||||| |||| ||| | |||||||||||| |||||||     
T  2067916 gtcgctttaggctttgacacatagattaagaaatggaatgaaataatcatttgatataacgcttttattaaactgc-ccttactttataaggaaaagacc 2067818  T
Q  1048 aacttaaa 1055  Q
    || |||||    
T  2067817 aaattaaa 2067810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 968 - 1019
Target Start/End: Complemental strand, 24732144 - 24732093
Alignment:
Q  968 acagattaagaaattgaatgaaataataattagatataacacttttactaaa 1019  Q
    ||||||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  24732144 acagattaagaaattgaatgaaatagtcattggatataacacttttactaaa 24732093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 984 - 1055
Target Start/End: Complemental strand, 30789115 - 30789045
Alignment:
Q  984 aatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||||| |||||| |||||||||||| |||||||  | ||||||||||||||||||||||| |||||    
T  30789115 aatgaaataatcattagacataacacttttattaaattg-tccttactttataagaaaaagacaaatttaaa 30789045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 968 - 1055
Target Start/End: Complemental strand, 36915561 - 36915475
Alignment:
Q  968 acagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||||||| ||| |||||||||||| |||||| |||| | |||||||||||||| | ||  |||||| ||||||||||||||||||    
T  36915561 acagattaaggaatggaatgaaataatcattagacataatatttttactaaattgc-ccttgttttatatgaaaaagacaaacttaaa 36915475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 952 - 1055
Target Start/End: Original strand, 11335979 - 11336075
Alignment:
Q  952 ttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaact 1051  Q
    |||||||| |||  ||||||||||||||||  |||||| |||  ||| ||||||||||||||||||||       ||||||||||||||||||||||| |    
T  11335979 ttttaggctttgacacacagattaagaaatgtaatgaagtaaccattcgatataacacttttactaaa-------ttactttataagaaaaagacaaaat 11336071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 837 - 890
Target Start/End: Original strand, 24915239 - 24915292
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagtcaattttt 890  Q
    |||||||||  |||||| |||||||||||||||||||||||||||| |||||||    
T  24915239 ctatttctaagctagatacatcaattatttaatgaatctaaaaagttaattttt 24915292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 966 - 1055
Target Start/End: Original strand, 45187250 - 45187338
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||||||||| |||  ||||||||||| |||||| || |||||||||||||| ||  | ||  |||||||||||||||||||||||||    
T  45187250 acacagattaaggaatataatgaaataatcattagacatgacacttttactaaactg-tccttgttttataagaaaaagacaaacttaaa 45187338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 972 - 1019
Target Start/End: Complemental strand, 2812968 - 2812921
Alignment:
Q  972 attaagaaattgaatgaaataataattagatataacacttttactaaa 1019  Q
    |||||| |||||||||||||||| |||||| |||||||||||||||||    
T  2812968 attaagtaattgaatgaaataatcattagacataacacttttactaaa 2812921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 984 - 1055
Target Start/End: Original strand, 41790113 - 41790183
Alignment:
Q  984 aatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||||| |||||| |||| ||||||| |||||||  |||| |||||||||||||||||||| |||||    
T  41790113 aatgaaataatcattagacataatacttttattaaattg-tctttgctttataagaaaaagacaaatttaaa 41790183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 961 - 1019
Target Start/End: Original strand, 32061408 - 32061466
Alignment:
Q  961 ttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaa 1019  Q
    |||| ||||| |||||||||||||| |||||||| || ||| |||||||||||||||||    
T  32061408 ttggcacacatattaagaaattgaacgaaataatcatcagacataacacttttactaaa 32061466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 966 - 1055
Target Start/End: Complemental strand, 11257737 - 11257650
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||| |||||||||| |||||||||||| |||| | | |||| |||||||||| | | ||||| ||||||||||| |||||||||||||    
T  11257737 acacaaattaagaaatggaatgaaataattattaaaaa-aacatttttactaaactac-ctttattttataagaaacagacaaacttaaa 11257650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 966 - 1055
Target Start/End: Original strand, 32326679 - 32326767
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||||||||| |||  ||||||||||| ||||||  |||||||||||||||| ||| | ||  |||||| |||||||||||| |||||    
T  32326679 acacagattaaggaatgaaatgaaataatcattagacgtaacacttttactaaactgc-ccttgttttatatgaaaaagacaaatttaaa 32326767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 847 - 890
Target Start/End: Complemental strand, 3236398 - 3236355
Alignment:
Q  847 actagattcatcaattatttaatgaatctaaaaagtcaattttt 890  Q
    ||||||| ||||||||||| ||||||| ||||||||||||||||    
T  3236398 actagatacatcaattattcaatgaatttaaaaagtcaattttt 3236355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 966 - 1019
Target Start/End: Original strand, 3095467 - 3095520
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaa 1019  Q
    ||||| ||||| |||| |||||||||||| |||| |||| ||||||||||||||    
T  3095467 acacaaattaaaaaatagaatgaaataatcattaaatatgacacttttactaaa 3095520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 855 - 896
Target Start/End: Original strand, 10184639 - 10184680
Alignment:
Q  855 catcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    ||||||||||| ||||||||||||||||| |||||| |||||    
T  10184639 catcaattattcaatgaatctaaaaagtcgattttttcttat 10184680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 859 - 896
Target Start/End: Complemental strand, 10839819 - 10839782
Alignment:
Q  859 aattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  10839819 aattattcaatgaatctaaaaagtcaattttttcttat 10839782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 841 - 890
Target Start/End: Original strand, 42123040 - 42123089
Alignment:
Q  841 ttctagactagattcatcaattatttaatgaatctaaaaagtcaattttt 890  Q
    |||||||| |||| ||| ||||| | ||||||||||||||||||||||||    
T  42123040 ttctagacaagatacattaattactcaatgaatctaaaaagtcaattttt 42123089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 3e-32; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 948 - 1055
Target Start/End: Complemental strand, 15400389 - 15400282
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagaca 1047  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | | ||||||||||||||||||||  |    
T  15400389 gtcgttttaggtgttggcacacagattaaaaaattgaatgaaataattattagatataacacttttactaaaattccctttactttataagaaaaaggaa 15400290  T
Q  1048 aacttaaa 1055  Q
    ||||||||    
T  15400289 aacttaaa 15400282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 948 - 1055
Target Start/End: Original strand, 14979987 - 14980093
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagaca 1047  Q
    |||| ||||||| |||| |||||||||||||||| |||||||||||| ||| |||||||||||||||| ||| ||| | |||||||||||||||||||||    
T  14979987 gtcgctttaggctttggcacacagattaagaaatggaatgaaataatcattggatataacacttttaccaaactgc-ccttactttataagaaaaagaca 14980085  T
Q  1048 aacttaaa 1055  Q
    || |||||    
T  14980086 aaattaaa 14980093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 948 - 1055
Target Start/End: Original strand, 31557276 - 31557383
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagaca 1047  Q
    ||||||||||| |||| |||||| |||||||||| |||||||||||| |||| |||||| ||||||| ||||   | |||||||||||||||||||||||    
T  31557276 gtcgttttaggtgttgatacacatattaagaaatagaatgaaataatcattaaatataatacttttagtaaacaaccctttactttataagaaaaagaca 31557375  T
Q  1048 aacttaaa 1055  Q
    ||||||||    
T  31557376 aacttaaa 31557383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 948 - 1055
Target Start/End: Original strand, 4967427 - 4967533
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagaca 1047  Q
    |||| ||||||| |||  |||||||||||||||| |||||||||||| ||| |||||||| ||||||||||| ||| | ||||||||||| |||||||||    
T  4967427 gtcgctttaggctttgacacacagattaagaaatggaatgaaataatcattggatataacgcttttactaaactgc-ccttactttataaaaaaaagaca 4967525  T
Q  1048 aacttaaa 1055  Q
    || |||||    
T  4967526 aaattaaa 4967533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 966 - 1055
Target Start/End: Original strand, 12167564 - 12167652
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||| ||||||||||||||||||||||| |||||| | ||||||||||||||| ||| | |||||||||||||||| | ||||||||||    
T  12167564 acacaaattaagaaattgaatgaaataatcattagacaaaacacttttactaaactgc-ccttactttataagaaaaggtcaaacttaaa 12167652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 966 - 1055
Target Start/End: Complemental strand, 36660624 - 36660536
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||||||||| |||  ||||||||||| |||||| ||||||||||||||||| ||  | |||||||||||||||||||||||||||||    
T  36660624 acacagattaaggaatgaaatgaaataatcattagacataacacttttactaaaatg-tccttactttataagaaaaagacaaacttaaa 36660536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 953 - 1055
Target Start/End: Complemental strand, 31889931 - 31889830
Alignment:
Q  953 tttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaactt 1052  Q
    ||||||| |||  |||||||||||||||| |||||||||||| |||  |||||||  ||| |||||| ||| | ||||||||||||||||||||||| ||    
T  31889931 tttaggctttgacacacagattaagaaatggaatgaaataattattgaatataacgttttcactaaactgc-ccttactttataagaaaaagacaaaatt 31889833  T
Q  1053 aaa 1055  Q
    |||    
T  31889832 aaa 31889830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 966 - 1055
Target Start/End: Original strand, 43257814 - 43257902
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||||||||  |||  ||||||||||| |||||| ||||||||| ||||||| ||| | ||||||||||||||| |||||||||||||    
T  43257814 acacagattaaagaatgaaatgaaataatcattagacataacacttatactaaactgc-ccttactttataagaaatagacaaacttaaa 43257902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 966 - 1055
Target Start/End: Original strand, 166603 - 166691
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctt-tactttataagaaaaagacaaacttaaa 1055  Q
    |||||||||||| |||  ||||||||||| |||||| ||||||||||||||||| ||| ||| ||  ||||| ||||||||||||||||||    
T  166603 acacagattaaggaatgaaatgaaataatcattagaaataacacttttactaaactgcccttgta--ttatatgaaaaagacaaacttaaa 166691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 966 - 1060
Target Start/End: Complemental strand, 34919934 - 34919841
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaataata 1060  Q
    |||||||||||| |||  ||| ||||||| ||| || ||| || |||||||||| ||| ||| |||||||||||||||||||||||||| |||||    
T  34919934 acacagattaaggaatgaaataaaataatcattggacatagcaattttactaaactgccctt-actttataagaaaaagacaaacttaattaata 34919841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 966 - 1055
Target Start/End: Complemental strand, 36783554 - 36783466
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||||||| ||  ||||||||||| |||||| |||||| |||||||||||||| | ||||||  || |||||||||||| |||||    
T  36783554 acacagattaagagatgaaatgaaataatcattagacataacatttttactaaattgc-ccttacttgttatgaaaaagacaaatttaaa 36783466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 837 - 896
Target Start/End: Original strand, 1138287 - 1138346
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||||| |||||| ||| ||||||||||||||| |||||| ||||||||| |||||    
T  1138287 ctatttctagtctagatacattaattatttaatgaatttaaaaaatcaattttttcttat 1138346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 837 - 896
Target Start/End: Complemental strand, 27488425 - 27488366
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||||| |||||| ||||||||||| |||||||||||||| | ||||||| |||||    
T  27488425 ctatttctaggctagatacatcaattattgaatgaatctaaaaaattaattttttcttat 27488366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 951 - 1055
Target Start/End: Original strand, 4011599 - 4011702
Alignment:
Q  951 gttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaac 1050  Q
    ||||||||| |||  ||| |||||||||||| |||| ||||||| ||| ||||||||  |||| ||||| ||| | ||| ||||||||||||||| |||     
T  4011599 gttttaggctttgacacatagattaagaaatggaatcaaataatcattggatataacgttttttctaaaatgc-ccttattttataagaaaaagataaaa 4011697  T
Q  1051 ttaaa 1055  Q
    |||||    
T  4011698 ttaaa 4011702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1025 - 1056
Target Start/End: Original strand, 32963020 - 32963051
Alignment:
Q  1025 ctttactttataagaaaaagacaaacttaaat 1056  Q
    ||||||||||||||||||||||||||||||||    
T  32963020 ctttactttataagaaaaagacaaacttaaat 32963051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 966 - 1019
Target Start/End: Complemental strand, 4371549 - 4371496
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaa 1019  Q
    ||||| |||||| ||| |||||||||||| |||||| ||| |||||||||||||    
T  4371549 acacaaattaaggaatggaatgaaataatcattagacatagcacttttactaaa 4371496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 966 - 1019
Target Start/End: Original strand, 4751484 - 4751537
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaa 1019  Q
    ||||| |||||| |||  ||||||||||| |||||| |||||||||||||||||    
T  4751484 acacatattaaggaatgaaatgaaataatcattagacataacacttttactaaa 4751537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 970 - 1015
Target Start/End: Original strand, 24436498 - 24436543
Alignment:
Q  970 agattaagaaattgaatgaaataataattagatataacacttttac 1015  Q
    |||||||| |||  ||||||||||| ||||||||||||||||||||    
T  24436498 agattaaggaataaaatgaaataatcattagatataacacttttac 24436543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 837 - 890
Target Start/End: Complemental strand, 26327614 - 26327561
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagtcaattttt 890  Q
    |||||| |||| ||| | ||||||||||| |||||||||||||||| |||||||    
T  26327614 ctatttttagattaggtacatcaattattgaatgaatctaaaaagttaattttt 26327561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 978 - 1023
Target Start/End: Complemental strand, 33741813 - 33741768
Alignment:
Q  978 aaattgaatgaaataataattagatataacacttttactaaattgc 1023  Q
    |||| |||||||||||| |||||||||| || ||||||||||||||    
T  33741813 aaatggaatgaaataatcattagatataccatttttactaaattgc 33741768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 855 - 888
Target Start/End: Original strand, 34297262 - 34297295
Alignment:
Q  855 catcaattatttaatgaatctaaaaagtcaattt 888  Q
    ||||||||| ||||||||||||||||||||||||    
T  34297262 catcaattacttaatgaatctaaaaagtcaattt 34297295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 859 - 896
Target Start/End: Complemental strand, 38394484 - 38394447
Alignment:
Q  859 aattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  38394484 aattattcaatgaatctaaaaagtcaattttttcttat 38394447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 8e-24; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 8e-24
Query Start/End: Original strand, 966 - 1055
Target Start/End: Original strand, 647546 - 647634
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||||||||||  ||||||||||| ||||||||||||| |||||||||| ||| | |||||||||||||||||||||||||||||    
T  647546 acacagattaagaaatgaaatgaaataatcattagatataacagttttactaaactgc-ccttactttataagaaaaagacaaacttaaa 647634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 970 - 1055
Target Start/End: Original strand, 2567970 - 2568054
Alignment:
Q  970 agattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||||| |||||||||||||||| |||||||||||||||||||| ||| ||  | |||||||||||||||||||||||||||||    
T  2567970 agattaaggaattgaatgaaataatcattagatataacacttttacaaaaatg-tccttactttataagaaaaagacaaacttaaa 2568054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 972 - 1055
Target Start/End: Complemental strand, 40049067 - 40048985
Alignment:
Q  972 attaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||| ||| |||||||||||| |||||| |||||||||||| |||||||| ||||||||||||||||||||||||| |||||    
T  40049067 attaaggaatggaatgaaataatcattagacataacacttttattaaattgc-ctttactttataagaaaaagacaaatttaaa 40048985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 953 - 1055
Target Start/End: Original strand, 26965449 - 26965550
Alignment:
Q  953 tttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaactt 1052  Q
    ||||||| |||  ||||||||||||||||  ||||||||||| ||| |||||||| ||||||||||| ||| | ||||||||||||||||||||||| ||    
T  26965449 tttaggctttgacacacagattaagaaataaaatgaaataatcattggatataacgcttttactaaactgc-ccttactttataagaaaaagacaaaatt 26965547  T
Q  1053 aaa 1055  Q
    |||    
T  26965548 aaa 26965550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 970 - 1055
Target Start/End: Original strand, 1340887 - 1340971
Alignment:
Q  970 agattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||||  ||| ||||||||||||||||||| ||||||||||| ||||| ||  |||||||||||||||||||||||||||||||    
T  1340887 agattaaagaatggaatgaaataataattagacataacactttttctaaagtgt-ctttactttataagaaaaagacaaacttaaa 1340971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 966 - 1055
Target Start/End: Original strand, 27483147 - 27483235
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||| |||||| |||  ||||||||||| |||||| ||||||||||||||||||| | | |||||||||||||||||||||||||||||    
T  27483147 acacaaattaaggaatgaaatgaaataatcattagacataacacttttactaaatttc-ccttactttataagaaaaagacaaacttaaa 27483235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 966 - 1055
Target Start/End: Complemental strand, 38457659 - 38457571
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||| ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| | ||||||||| ||||||||| |||||||||    
T  38457659 acacaaattaagaaattgaatgaaataatcattacacataacacttttactaaactgc-cattactttattagaaaaagataaacttaaa 38457571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 948 - 1048
Target Start/End: Complemental strand, 34060082 - 34059983
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagaca 1047  Q
    |||| ||||||| |||| |||||||||||||||| |||||||||||||||| |||||||   |||||||||| | | | |||||||||||||||||||||    
T  34060082 gtcgctttaggctttggcacacagattaagaaatggaatgaaataataattggatataaagtttttactaaactac-ccttactttataagaaaaagaca 34059984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 961 - 1055
Target Start/End: Complemental strand, 5244788 - 5244696
Alignment:
Q  961 ttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||| ||||| ||||||||||||||||||||||| |||||| |||||||||||| |||| | | |||||| |||||||||||| |||||||||||    
T  5244788 ttggcacacatattaagaaattgaatgaaataatcattagacataacacttttattaaagt-ctctttac-ttataagaaaaaaacaaacttaaa 5244696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 966 - 1055
Target Start/End: Original strand, 44648364 - 44648453
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataag-aaaaagacaaacttaaa 1055  Q
    |||||||||||| |||  ||||||||||| |||||| ||||||||||||||||| ||| ||||||||||| || |||||||||||||||||    
T  44648364 acacagattaaggaatgaaatgaaataatcattagacataacacttttactaaactgc-ctttactttatgagaaaaaagacaaacttaaa 44648453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 967 - 1055
Target Start/End: Original strand, 2662447 - 2662534
Alignment:
Q  967 cacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||||  |||  ||||||||||| |||||| ||||||||||||||||||||| | ||| ||||||||||||||||||| |||||    
T  2662447 cacagattaaagaatcaaatgaaataatcattagacataacacttttactaaattgc-ccttattttataagaaaaagacaaatttaaa 2662534  T

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Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 968 - 1055
Target Start/End: Original strand, 38165617 - 38165703
Alignment:
Q  968 acagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||||||| |||  ||||||||||| |||| | ||||||||||||||||| ||  ||| |||||||||||||||||||||||||||    
T  38165617 acagattaaggaatgtaatgaaataatcattaaacataacacttttactaaactgtcctt-actttataagaaaaagacaaacttaaa 38165703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 966 - 1055
Target Start/End: Original strand, 31290928 - 31291015
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||||||||| |||  ||||||||||| |||||| ||||||||||||||||| ||| ||||| ||||| ||||||||| |||||||||    
T  31290928 acacagattaaggaatgaaatgaaataattattagacataacacttttactaaactgc-ctttattttattagaaaaaga-aaacttaaa 31291015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 970 - 1055
Target Start/End: Complemental strand, 35239556 - 35239472
Alignment:
Q  970 agattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||| ||||||||| ||||||| |||||  |||||| |||||||||| ||  ||| |||||||||||||||||||||||||||    
T  35239556 agattaaaaaattgaataaaataatcattaggcataacatttttactaaactgtcctt-actttataagaaaaagacaaacttaaa 35239472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 966 - 1055
Target Start/End: Original strand, 36771530 - 36771618
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||| ||||||||||  ||||||||||| |||||| |||| | |||||||||| ||| | ||| |||||||||||||||||||||||||    
T  36771530 acacatattaagaaatataatgaaataattattagacataatatttttactaaactgctc-ttattttataagaaaaagacaaacttaaa 36771618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 970 - 1055
Target Start/End: Original strand, 37225553 - 37225637
Alignment:
Q  970 agattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||||||  ||||||||||| ||| ||||||| |||||||||||| ||  | ||||||||||||||||||||||| |||||    
T  37225553 agattaagaaatacaatgaaataatcattggatataatacttttactaaactg-tccttactttataagaaaaagacaaaattaaa 37225637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 951 - 1055
Target Start/End: Complemental strand, 790286 - 790183
Alignment:
Q  951 gttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaac 1050  Q
    ||||||||| |||  ||||| ||||||||||  ||||||||||| |||  ||||||| ||||||||||| ||| | |||||||||||||||||| ||||     
T  790286 gttttaggctttgacacacatattaagaaatgtaatgaaataatcattgaatataacgcttttactaaactgc-ccttactttataagaaaaagtcaaaa 790188  T
Q  1051 ttaaa 1055  Q
    |||||    
T  790187 ttaaa 790183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 972 - 1055
Target Start/End: Complemental strand, 45095723 - 45095639
Alignment:
Q  972 attaagaaattgaatgaaataataattagatataacac-ttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||| ||| |||||||||||| |||| | ||||||| |||||||||| ||| | |||||||||||||||| ||||||||||||    
T  45095723 attaaggaatggaatgaaataatcattaaacataacacattttactaaaatgccccttactttataagaaaaggacaaacttaaa 45095639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 972 - 1048
Target Start/End: Complemental strand, 53716196 - 53716121
Alignment:
Q  972 attaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaa 1048  Q
    ||||||||||  ||||||||||| ||| |||||||| ||||||||||| ||| | ||||||||||||||||||||||    
T  53716196 attaagaaatgaaatgaaataatcattggatataacgcttttactaaactgctc-ttactttataagaaaaagacaa 53716121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 837 - 896
Target Start/End: Complemental strand, 49885457 - 49885398
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    ||||||||||||||||| ||||||||||| |||||||||||||| | ||||||| |||||    
T  49885457 ctatttctagactagatacatcaattattgaatgaatctaaaaaattaattttttcttat 49885398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 970 - 1055
Target Start/End: Complemental strand, 44854508 - 44854426
Alignment:
Q  970 agattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||||  |||||||||||||||| |||||| |  |||||||||||||| ||| ||| ||||||||||||||| |||||||||||    
T  44854508 agattaatgaattgaatgaaataatcattagaca--acacttttactaaactgccctt-actttataagaaaaatacaaacttaaa 44854426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 966 - 1055
Target Start/End: Complemental strand, 83494 - 83406
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||| |||||| |||  |||||| |||| |||||| | ||||||||||||||| | | ||| |||||||||||||||||||||||||||    
T  83494 acacaaattaaggaatgaaatgaattaatcattagacacaacacttttactaaactaccctt-actttataagaaaaagacaaacttaaa 83406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 966 - 1055
Target Start/End: Original strand, 46362964 - 46363052
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||| |||||| |||||||||||||||| ||||||  ||||| |||||||||| ||  | ||||||||||||||||| ||||| |||||    
T  46362964 acacatattaaggaattgaatgaaataatcattagacctaacatttttactaaactg-tccttactttataagaaaaatacaaatttaaa 46363052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 948 - 1055
Target Start/End: Complemental strand, 25061910 - 25061806
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagaca 1047  Q
    |||||||||| || | | ||||| |||||| |||  ||||||||||| |||||| ||||||||||||||||| | | | ||||||||||||||||  |||    
T  25061910 gtcgttttagccgattgcacacatattaaggaatgaaatgaaataatcattagacataacacttttactaaactac-ccttactttataagaaaa--aca 25061814  T
Q  1048 aacttaaa 1055  Q
    ||||||||    
T  25061813 aacttaaa 25061806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 948 - 1055
Target Start/End: Original strand, 43600126 - 43600234
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaa-gac 1046  Q
    ||||||||||| ||||| ||  | | ||||||||  ||| ||||||| ||||||||||||| |||||||||| | | ||||||||||||| ||||| |||    
T  43600126 gtcgttttaggtgttggcacgtataataagaaatgaaataaaataattattagatataacatttttactaaacttccctttactttataaaaaaaatgac 43600225  T
Q  1047 aaacttaaa 1055  Q
    ||| |||||    
T  43600226 aaatttaaa 43600234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 984 - 1055
Target Start/End: Original strand, 43736842 - 43736911
Alignment:
Q  984 aatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||||| |||||||||||||||||||||||| | | | ||| ||||||||||||||| |||||||||    
T  43736842 aatgaaataatcattagatataacacttttactaaactactc-ttattttataagaaaaaga-aaacttaaa 43736911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 966 - 1055
Target Start/End: Complemental strand, 43580678 - 43580588
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctt-tactttataagaaaaagacaaacttaaa 1055  Q
    |||||||||||| ||| |||||||||||| |||| |||||||| |||||||||| ||| ||| |  | |||| |||||||||||| |||||    
T  43580678 acacagattaaggaatagaatgaaataatcattacatataacatttttactaaactgcccttgttttatatatgaaaaagacaaatttaaa 43580588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 948 - 1055
Target Start/End: Complemental strand, 19552749 - 19552642
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataac-acttttactaaattgcgctttactttataagaaaaagac 1046  Q
    |||||||||| | |||| ||||| ||||||||||  ||||||||||| ||| ||||||||   |||||||||| ||  | ||||||||||||||||| ||    
T  19552749 gtcgttttagactttggcacacaaattaagaaatgaaatgaaataatcattggatataacgttttttactaaactg-tccttactttataagaaaaatac 19552651  T
Q  1047 aaacttaaa 1055  Q
    ||| |||||    
T  19552650 aaaattaaa 19552642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 972 - 1019
Target Start/End: Complemental strand, 4392088 - 4392041
Alignment:
Q  972 attaagaaattgaatgaaataataattagatataacacttttactaaa 1019  Q
    ||||||||||  ||||||||||| |||||| |||||||||||||||||    
T  4392088 attaagaaatgaaatgaaataattattagacataacacttttactaaa 4392041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 837 - 896
Target Start/End: Original strand, 29457909 - 29457968
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    ||||||||||||||| | ||||||| ||| |||||||||||||||| || |||| |||||    
T  29457909 ctatttctagactaggtacatcaatcattgaatgaatctaaaaagttaactttttcttat 29457968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 841 - 896
Target Start/End: Complemental strand, 54537517 - 54537462
Alignment:
Q  841 ttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    ||||||||||||| ||||||||| | ||||||||| ||||||||| |||| |||||    
T  54537517 ttctagactagatacatcaattactcaatgaatcttaaaagtcaaatttttcttat 54537462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 855 - 896
Target Start/End: Original strand, 5177853 - 5177894
Alignment:
Q  855 catcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    ||||||||||| |||||||||||||||| ||||||| |||||    
T  5177853 catcaattattgaatgaatctaaaaagttaattttttcttat 5177894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 966 - 1019
Target Start/End: Original strand, 42857045 - 42857098
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaa 1019  Q
    |||||||||||| |||  ||||||||||| |||||| |||||| ||||||||||    
T  42857045 acacagattaaggaatcaaatgaaataatcattagacataacatttttactaaa 42857098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 1e-22; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 948 - 1055
Target Start/End: Original strand, 4840663 - 4840769
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagaca 1047  Q
    |||||||||||| |||| ||||| |||||||||| |||||||||||| ||| ||||||||  |||||||||| ||| | |||||||||||||||||||||    
T  4840663 gtcgttttaggctttggcacacatattaagaaatggaatgaaataatcattggatataacgtttttactaaactgc-ccttactttataagaaaaagaca 4840761  T
Q  1048 aacttaaa 1055  Q
    || |||||    
T  4840762 aaattaaa 4840769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 966 - 1055
Target Start/End: Complemental strand, 24775387 - 24775299
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||| ||||||  ||||||||||||||| |||||||||||||||||||||||| ||| | ||||||||||||||||| |||||||||||    
T  24775387 acacaaattaaggtattgaatgaaataatcattagatataacacttttactaaaatgctc-ttactttataagaaaaaaacaaacttaaa 24775299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 948 - 1055
Target Start/End: Complemental strand, 40410659 - 40410553
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagaca 1047  Q
    |||| |||||||||||  |||||||||||||||| |||||| ||||| ||| |||||||| |||||| |||| ||| | |||||||||||||||||||||    
T  40410659 gtcgctttaggcgttgtcacacagattaagaaatggaatgacataatcattggatataacgcttttattaaactgc-ccttactttataagaaaaagaca 40410561  T
Q  1048 aacttaaa 1055  Q
    || |||||    
T  40410560 aaattaaa 40410553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 966 - 1055
Target Start/End: Complemental strand, 7743599 - 7743511
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||||||||  |||| ||||||||||| || |||||||||||||||||||| |||| | ||||||||||||||||||||||| |||||    
T  7743599 acacagattaaagaattaaatgaaataatcatcagatataacacttttactaagttgc-ccttactttataagaaaaagacaaatttaaa 7743511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 970 - 1055
Target Start/End: Complemental strand, 34225944 - 34225860
Alignment:
Q  970 agattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||||| |||  ||||||||||| |||||| |||| | |||||||||||||| ||| |||||||||||||||||||||||||||    
T  34225944 agattaaggaatgaaatgaaataatcattagacataataattttactaaattgccctt-actttataagaaaaagacaaacttaaa 34225860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 970 - 1055
Target Start/End: Original strand, 1298738 - 1298822
Alignment:
Q  970 agattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||||||  ||||||||||| |||  |||||||  |||||||||||||| | ||||||||||||||||||||||| |||||    
T  1298738 agattaagaaataaaatgaaataatcattgaatataacgtttttactaaattgc-ccttactttataagaaaaagacaaaattaaa 1298822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 966 - 1055
Target Start/End: Original strand, 40987236 - 40987324
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||| |||||| |||  ||||||||||| |||||| ||||||||||||||||||||  | ||||||||||||||||||| ||| |||||    
T  40987236 acacatattaaggaatgaaatgaaataatcattagacataacacttttactaaattg-tccttactttataagaaaaagataaatttaaa 40987324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 987 - 1055
Target Start/End: Complemental strand, 1381916 - 1381849
Alignment:
Q  987 gaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||||| |||||| ||||||||||||||||| ||| ||| ||||||||||||||||| |||||||||    
T  1381916 gaaataatcattagacataacacttttactaaactgctctt-actttataagaaaaagaaaaacttaaa 1381849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 966 - 1055
Target Start/End: Complemental strand, 37107062 - 37106972
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataag--aaaaagacaaacttaaa 1055  Q
    ||||| |||||||||| |||||||||||| ||| || | ||||||||||||||||||| | ||||||||||||  ||||||| |||||||||    
T  37107062 acacacattaagaaatggaatgaaataattatttgacacaacacttttactaaattgc-ccttactttataagcaaaaaagaaaaacttaaa 37106972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 948 - 1055
Target Start/End: Original strand, 4766153 - 4766254
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagaca 1047  Q
    |||| ||||| | |||||||||||||||||||||     |||||||| ||| ||||||||  | |||||||| ||| |||||||||||||||||||||||    
T  4766153 gtcgctttagcctttggtacacagattaagaaat-----gaaataatcattggatataacgttattactaaactgc-ctttactttataagaaaaagaca 4766246  T
Q  1048 aacttaaa 1055  Q
    || |||||    
T  4766247 aaattaaa 4766254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 984 - 1055
Target Start/End: Original strand, 36360347 - 36360417
Alignment:
Q  984 aatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||||| |||||| ||||||||||||||||| ||| | ||| ||||||||||||||| |||||||||    
T  36360347 aatgaaataatcattagacataacacttttactaaactgc-ccttattttataagaaaaagataaacttaaa 36360417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 966 - 1055
Target Start/End: Original strand, 14378202 - 14378290
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||| ||||  ||| |||||||||||| |||  ||||||||||||||||||| ||| | ||||||||||||||||||| ||| |||||    
T  14378202 acacagtttaatgaatagaatgaaataatcatttaatataacacttttactaaactgc-ccttactttataagaaaaagataaatttaaa 14378290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 948 - 1055
Target Start/End: Complemental strand, 43460986 - 43460883
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagaca 1047  Q
    ||||||||| || |||| |||| | ||||||||| |||||||||||| ||| |||   |||||||||||||| ||| | |||||||||||| ||||||||    
T  43460986 gtcgttttaagctttggcacacggtttaagaaatggaatgaaataatcattggat---acacttttactaaactgc-ccttactttataaggaaaagaca 43460891  T
Q  1048 aacttaaa 1055  Q
    || |||||    
T  43460890 aaattaaa 43460883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 966 - 1019
Target Start/End: Complemental strand, 44228664 - 44228611
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaa 1019  Q
    |||| |||||| |||| |||||||||||| ||||||||||||||||||||||||    
T  44228664 acacggattaaaaaatggaatgaaataatcattagatataacacttttactaaa 44228611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 967 - 1055
Target Start/End: Complemental strand, 11171940 - 11171853
Alignment:
Q  967 cacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||| ||||||||||||||| ||||||| | |||| |||||||||||||||||||   | | |||||||  ||||||||||||||||||    
T  11171940 cacaaattaagaaattgaataaaataatcaatagacataacacttttactaaatt-atcctaactttatgcgaaaaagacaaacttaaa 11171853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 969 - 1048
Target Start/End: Original strand, 29795156 - 29795234
Alignment:
Q  969 cagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaa 1048  Q
    ||||||||  ||| |||||||||||| |||||| |||| |||||||||||| ||| | ||| ||||||||||||||||||    
T  29795156 cagattaatgaatggaatgaaataatcattagacataatacttttactaaactgc-ccttattttataagaaaaagacaa 29795234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 841 - 896
Target Start/End: Original strand, 32457287 - 32457342
Alignment:
Q  841 ttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||| |||| ||||||||| ||||||||||||||||||||| |||| |||||    
T  32457287 ttctagacaagatacatcaattacttaatgaatctaaaaagtcaaatttttcttat 32457342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 837 - 896
Target Start/End: Complemental strand, 45571108 - 45571049
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||||| |||| | ||||||||||| |||||||||||||||| ||||||| |||||    
T  45571108 ctatttctaggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttat 45571049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 837 - 896
Target Start/End: Complemental strand, 45574775 - 45574716
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||||| |||| | ||||||||||| |||||||||||||||| ||||||| |||||    
T  45574775 ctatttctaggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttat 45574716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 837 - 896
Target Start/End: Complemental strand, 45578442 - 45578383
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||||| |||| | ||||||||||| |||||||||||||||| ||||||| |||||    
T  45578442 ctatttctaggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttat 45578383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 837 - 896
Target Start/End: Complemental strand, 45582109 - 45582050
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||||| |||| | ||||||||||| |||||||||||||||| ||||||| |||||    
T  45582109 ctatttctaggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttat 45582050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 837 - 896
Target Start/End: Complemental strand, 45585776 - 45585717
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||||| |||| | ||||||||||| |||||||||||||||| ||||||| |||||    
T  45585776 ctatttctaggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttat 45585717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 837 - 896
Target Start/End: Complemental strand, 45589443 - 45589384
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||||| |||| | ||||||||||| |||||||||||||||| ||||||| |||||    
T  45589443 ctatttctaggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttat 45589384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 837 - 896
Target Start/End: Complemental strand, 45593110 - 45593051
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||||| |||| | ||||||||||| |||||||||||||||| ||||||| |||||    
T  45593110 ctatttctaggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttat 45593051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 837 - 896
Target Start/End: Complemental strand, 45596777 - 45596718
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||||| |||| | ||||||||||| |||||||||||||||| ||||||| |||||    
T  45596777 ctatttctaggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttat 45596718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 837 - 896
Target Start/End: Complemental strand, 45600444 - 45600385
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||||| |||| | ||||||||||| |||||||||||||||| ||||||| |||||    
T  45600444 ctatttctaggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttat 45600385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 837 - 896
Target Start/End: Complemental strand, 45604111 - 45604052
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||||| |||| | ||||||||||| |||||||||||||||| ||||||| |||||    
T  45604111 ctatttctaggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttat 45604052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 837 - 896
Target Start/End: Complemental strand, 45607778 - 45607719
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||||| |||| | ||||||||||| |||||||||||||||| ||||||| |||||    
T  45607778 ctatttctaggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttat 45607719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 837 - 896
Target Start/End: Complemental strand, 45611445 - 45611386
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||||| |||| | ||||||||||| |||||||||||||||| ||||||| |||||    
T  45611445 ctatttctaggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttat 45611386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 837 - 896
Target Start/End: Complemental strand, 45615112 - 45615053
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||||| |||| | ||||||||||| |||||||||||||||| ||||||| |||||    
T  45615112 ctatttctaggctaggtacatcaattattgaatgaatctaaaaagttaattttttcttat 45615053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 844 - 890
Target Start/End: Original strand, 7943516 - 7943562
Alignment:
Q  844 tagactagattcatcaattatttaatgaatctaaaaagtcaattttt 890  Q
    ||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  7943516 tagacaagatacatcaattattcaatgaatctaaaaagtcaattttt 7943562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 844 - 887
Target Start/End: Original strand, 9152456 - 9152499
Alignment:
Q  844 tagactagattcatcaattatttaatgaatctaaaaagtcaatt 887  Q
    |||||||||| ||||||||| | |||||||||||||||||||||    
T  9152456 tagactagatacatcaattactcaatgaatctaaaaagtcaatt 9152499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 984 - 1022
Target Start/End: Complemental strand, 6592136 - 6592098
Alignment:
Q  984 aatgaaataataattagatataacacttttactaaattg 1022  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  6592136 aatgaaataatcattagacataacacttttactaaattg 6592098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 859 - 896
Target Start/End: Original strand, 28249025 - 28249062
Alignment:
Q  859 aattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    ||||||||||||||||||||||||||| |||| |||||    
T  28249025 aattatttaatgaatctaaaaagtcaactttttcttat 28249062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 850 - 887
Target Start/End: Original strand, 38449021 - 38449058
Alignment:
Q  850 agattcatcaattatttaatgaatctaaaaagtcaatt 887  Q
    |||| |||||||||||||||||| ||||||||||||||    
T  38449021 agatgcatcaattatttaatgaacctaaaaagtcaatt 38449058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 5e-22; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 969 - 1055
Target Start/End: Complemental strand, 34360197 - 34360112
Alignment:
Q  969 cagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||| |||  ||||||||||| |||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||    
T  34360197 cagattaaggaatgaaatgaaataatcattagatataacacttttactaaactgc-ccttactttataagaaaaagacaaacttaaa 34360112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 961 - 1055
Target Start/End: Original strand, 43421076 - 43421169
Alignment:
Q  961 ttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||| ||||| |||||||||| |||||||||||| ||| ||||||| |||||||||||||||| | ||||||||||||||||||||||| |||||    
T  43421076 ttggcacacaaattaagaaatggaatgaaataatcattggatataatacttttactaaattgctc-ttactttataagaaaaagacaaaattaaa 43421169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 964 - 1056
Target Start/End: Original strand, 32140941 - 32141032
Alignment:
Q  964 gtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaat 1056  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||| |  ||||||||||  ||||||||||| |||||    
T  32140941 gtacacagattaagaaattgaatgaaataatcattagacataacacttttactaaactgc-ccctactttataaacaaaagacaaacataaat 32141032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 948 - 1055
Target Start/End: Complemental strand, 34096229 - 34096123
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagaca 1047  Q
    ||||||||||||  | | ||||| ||||| ||||  ||||||||||| ||||||  |||||||||||||||||||| | |||||||||||||||||||||    
T  34096229 gtcgttttaggcaattgcacacaaattaaaaaatgaaatgaaataatcattagacttaacacttttactaaattgc-ccttactttataagaaaaagaca 34096131  T
Q  1048 aacttaaa 1055  Q
    ||||||||    
T  34096130 aacttaaa 34096123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 948 - 1055
Target Start/End: Original strand, 56422938 - 56423044
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagaca 1047  Q
    |||| ||||||| |||  |||||||||||||||| |||||||||||| ||| |||||||| ||||||||||| ||  ||||||||||||||||||||||     
T  56422938 gtcgctttaggctttgacacacagattaagaaatcgaatgaaataatcattggatataacgcttttactaaactg-tctttactttataagaaaaagacg 56423036  T
Q  1048 aacttaaa 1055  Q
    || |||||    
T  56423037 aaattaaa 56423044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 950 - 1055
Target Start/End: Complemental strand, 52732802 - 52732698
Alignment:
Q  950 cgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaa 1049  Q
    |||||||||| |||  ||| ||||||| |||| |||||||||||| ||| |||||||||||||||||||| ||| | |||||||||||| ||||||||||    
T  52732802 cgttttaggctttgacacatagattaaaaaatggaatgaaataatcattggatataacacttttactaaactgc-ccttactttataaggaaaagacaaa 52732704  T
Q  1050 cttaaa 1055  Q
     |||||    
T  52732703 attaaa 52732698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 964 - 1055
Target Start/End: Original strand, 51737277 - 51737365
Alignment:
Q  964 gtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||| |||||| ||| ||||||||||||||||||| ||||||||||||||||||| | | |||||||||  ||||||||||||||||||    
T  51737277 gtacacaaattaaggaatagaatgaaataataattagacataacacttttactaaattac-ccttactttat--gaaaaagacaaacttaaa 51737365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 971 - 1055
Target Start/End: Original strand, 39671068 - 39671151
Alignment:
Q  971 gattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||||| ||||||||| || |||||| ||||||| ||||||||| | | ||||||||||||||||||| |||||||||||    
T  39671068 gattaagaaatggaatgaaattatcattagacataacacatttactaaactac-ctttactttataagaaaaaaacaaacttaaa 39671151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 984 - 1055
Target Start/End: Complemental strand, 37445837 - 37445767
Alignment:
Q  984 aatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||||| |||||| ||||||||||||||||| ||| | ||||||||||||||||||||||| |||||    
T  37445837 aatgaaataatcattagacataacacttttactaaactgc-ccttactttataagaaaaagacaaatttaaa 37445767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 948 - 1055
Target Start/End: Complemental strand, 44855457 - 44855351
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagaca 1047  Q
    |||| |||| || |||| ||||| |||||||||| |||||||||||| |||  ||||||| ||||||||||| ||| | |||||||||||| ||||||||    
T  44855457 gtcgctttacgctttggcacacaaattaagaaatagaatgaaataatcattgaatataacgcttttactaaactgc-ccttactttataaggaaaagaca 44855359  T
Q  1048 aacttaaa 1055  Q
    || |||||    
T  44855358 aaattaaa 44855351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 972 - 1055
Target Start/End: Complemental strand, 51930765 - 51930683
Alignment:
Q  972 attaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||| ||||| |||||||||||||||| |||||||| ||||||||||| ||| | |||||||||||||||| |||||| |||||    
T  51930765 attatgaaatggaatgaaataataattggatataacgcttttactaaactgc-ccttactttataagaaaatgacaaaattaaa 51930683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 966 - 1055
Target Start/End: Complemental strand, 21045328 - 21045240
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||||||||| ||| |||||||||||| ||| |||||||  |||||| |||| ||| | ||||||||||||||||||||||| |||||    
T  21045328 acacagattaaggaatggaatgaaataatcattggatataaggcttttattaaactgc-ccttactttataagaaaaagacaaaattaaa 21045240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 966 - 1055
Target Start/End: Original strand, 36805407 - 36805495
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||||||||| |||  ||||||||||| |||||| ||||||||||||||||| ||  | ||| |||||| ||||||||||||||||||    
T  36805407 acacagattaaggaatgaaatgaaataatcattagacataacacttttactaaactg-tccttagtttatatgaaaaagacaaacttaaa 36805495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 970 - 1055
Target Start/End: Original strand, 45520419 - 45520503
Alignment:
Q  970 agattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||||||||| |||| ||||||| |||||| ||||||||||||||||  ||| | |||| ||||||||| ||||||||||||||    
T  45520419 agattaagaaatggaataaaataatcattagacataacacttttactaagctgc-ccttacattataagaataagacaaacttaaa 45520503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 966 - 1055
Target Start/End: Complemental strand, 54512218 - 54512130
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||| ||||||||||  ||||||||||||||| ||||||||  |||||||||| ||| | |||||||||||||||| |||||| |||||    
T  54512218 acacatattaagaaatgaaatgaaataataattggatataacgtttttactaaactgctc-ttactttataagaaaatgacaaaattaaa 54512130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 984 - 1055
Target Start/End: Original strand, 15501129 - 15501199
Alignment:
Q  984 aatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||||| |||||| |||||| |||||||||| ||| ||| ||||||||||||||| |||||||||||    
T  15501129 aatgaaataatcattagacataacatttttactaaactgccctt-actttataagaaaaatacaaacttaaa 15501199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 966 - 1055
Target Start/End: Complemental strand, 42672584 - 42672496
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||| |||||| |||  ||||||||||| |||||| ||||||||||||||||| | | |  |||||||||||||||||||||| |||||    
T  42672584 acacaaattaaggaatataatgaaataatcattagacataacacttttactaaactactc-atactttataagaaaaagacaaatttaaa 42672496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 972 - 1055
Target Start/End: Complemental strand, 19849273 - 19849191
Alignment:
Q  972 attaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||||  ||| ||||||| |||| |||||||| |||||||||| ||| ||  ||||||||||||||| |||||||||||    
T  19849273 attaagaaatgaaataaaataattattacatataacatttttactaaactgccctc-actttataagaaaaaaacaaacttaaa 19849191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 948 - 1043
Target Start/End: Original strand, 31817138 - 31817232
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaa 1043  Q
    |||| ||||||| |||  ||||| |||||||||| |||||||||||| ||| ||||||||  |||||||||| | | | |||||||||||||||||    
T  31817138 gtcgctttaggctttgacacacaaattaagaaatggaatgaaataatcattggatataacgtttttactaaacttc-ccttactttataagaaaaa 31817232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 837 - 896
Target Start/End: Original strand, 55190736 - 55190795
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||||| |||||| ||||||||||| ||||||| |||||| ||||||||| |||||    
T  55190736 ctatttctaggctagatacatcaattattgaatgaatataaaaaatcaattttttcttat 55190795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 961 - 1043
Target Start/End: Complemental strand, 3093548 - 3093467
Alignment:
Q  961 ttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaa 1043  Q
    |||| ||| ||||||||||||||||| ||||||| |||||| |||||||||| | |||||||  | || ||||||||||||||    
T  3093548 ttggcacatagattaagaaattgaataaaataatcattagacataacactttcattaaattg-tccttcctttataagaaaaa 3093467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 966 - 1054
Target Start/End: Original strand, 56556236 - 56556320
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaa 1054  Q
    |||||||||||| ||||||||||   ||| |||||| |||||||||||||||||||   | || |||||||||||||| ||||||||||    
T  56556236 acacagattaaggaattgaatga---aatcattagacataacacttttactaaatt-atccttgctttataagaaaaatacaaacttaa 56556320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 966 - 1019
Target Start/End: Complemental strand, 29840250 - 29840197
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaa 1019  Q
    ||||| |||||| ||| |||||||||||| |||||| |||||||||||||||||    
T  29840250 acacaaattaaggaatggaatgaaataatcattagacataacacttttactaaa 29840197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 856 - 896
Target Start/End: Complemental strand, 16412293 - 16412253
Alignment:
Q  856 atcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  16412293 atcaattattcaatgaatctaaaaagtcaattttttcttat 16412253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 971 - 1055
Target Start/End: Original strand, 38761788 - 38761871
Alignment:
Q  971 gattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||||| |||| ||||||| | |||| ||||||||||||||||||  | | ||||||||| ||| ||||||| |||||||    
T  38761788 gattaagaaatagaattaaataattaatagacataacacttttactaaatcac-ccttactttattagagaaagacacacttaaa 38761871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 948 - 1039
Target Start/End: Complemental strand, 50072467 - 50072374
Alignment:
Q  948 gtcgttttaggcgttggtacacagatt---aagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataaga 1039  Q
    |||| ||||| | ||||||||||||||   ||||||| |||||||||||| ||| ||||||||  |||||||||| ||| | |||||||||||||    
T  50072467 gtcgctttagactttggtacacagatttataagaaatggaatgaaataatcattggatataacgtttttactaaactgc-ccttactttataaga 50072374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 855 - 890
Target Start/End: Original strand, 10306456 - 10306491
Alignment:
Q  855 catcaattatttaatgaatctaaaaagtcaattttt 890  Q
    ||||||||||||||| ||||||||||||||||||||    
T  10306456 catcaattatttaatcaatctaaaaagtcaattttt 10306491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 837 - 896
Target Start/End: Original strand, 20459310 - 20459369
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||||| |||| | ||||||||||| |||||||||||||||| || |||| |||||    
T  20459310 ctatttctaggctaggtacatcaattattgaatgaatctaaaaagttaactttttcttat 20459369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 973 - 1055
Target Start/End: Original strand, 29289852 - 29289936
Alignment:
Q  973 ttaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttat---aagaaaaagacaaacttaaa 1055  Q
    ||||||||| |||||||||||| |||||| |||| | ||||| ||||| || |||||||||||   || |||||||||||||||||    
T  29289852 ttaagaaatggaatgaaataatcattagacataatatttttaataaatcgc-ctttactttataaaaaaaaaaagacaaacttaaa 29289936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 1000 - 1055
Target Start/End: Complemental strand, 35928650 - 35928596
Alignment:
Q  1000 gatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||| ||||||||||||||||| | | ||||||||||||||||| |||||||||    
T  35928650 gatatatcacttttactaaattgc-catgactttataagaaaaagataaacttaaa 35928596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 837 - 896
Target Start/End: Complemental strand, 47866114 - 47866055
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||||| |||| | ||||||||||| |||||||||||||||| || |||| |||||    
T  47866114 ctatttctaggctaggtacatcaattattgaatgaatctaaaaagttaactttttcttat 47866055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 966 - 1016
Target Start/End: Complemental strand, 30492915 - 30492865
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttact 1016  Q
    ||||| |||||| ||| |||||||||||| |||||| ||||||||||||||    
T  30492915 acacaaattaaggaatggaatgaaataatcattagacataacacttttact 30492865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 970 - 1019
Target Start/End: Original strand, 45903377 - 45903426
Alignment:
Q  970 agattaagaaattgaatgaaataataattagatataacacttttactaaa 1019  Q
    |||||||||||| |||||||||||| ||| |||||||| |||||| ||||    
T  45903377 agattaagaaatagaatgaaataatcattggatataacgcttttattaaa 45903426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 859 - 896
Target Start/End: Original strand, 53225736 - 53225773
Alignment:
Q  859 aattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  53225736 aattattcaatgaatctaaaaagtcaattttttcttat 53225773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 2e-21; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 966 - 1055
Target Start/End: Original strand, 34002086 - 34002175
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||||||||||  ||||||||||| ||| |||||||||| ||| ||||| ||| ||||||||||||||||||||||||| |||||    
T  34002086 acacagattaagaaatgaaatgaaataatcattggatataacacctttgctaaactgcactttactttataagaaaaagacaaaattaaa 34002175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 959 - 1055
Target Start/End: Complemental strand, 18886851 - 18886756
Alignment:
Q  959 cgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||| ||||||| |||||||| |||||||||||| |||||||||||| ||||||||||| ||| | |||||||||||| |||||||||| |||||    
T  18886851 cgttggcacacagactaagaaatggaatgaaataatcattagatataacgcttttactaaactgc-ccttactttataaggaaaagacaaaattaaa 18886756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 966 - 1055
Target Start/End: Original strand, 3680877 - 3680965
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||||| |||| |||||||||||| |||||| |||| |||||||||||| ||| | ||||||||||||||||||||||| |||||    
T  3680877 acacagattaaaaaatggaatgaaataatcattagacataaaacttttactaaactgctc-ttactttataagaaaaagacaaatttaaa 3680965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 5e-19
Query Start/End: Original strand, 966 - 1055
Target Start/End: Complemental strand, 17869436 - 17869348
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||||||||| |||  ||||||||||| |||||| |||||||||||| |||||||  ||||||||||||||||||| |||||||||||    
T  17869436 acacagattaaggaatgaaatgaaataatcattagacataacacttttattaaattg-tctttactttataagaaaaatacaaacttaaa 17869348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 951 - 1055
Target Start/End: Original strand, 36447550 - 36447653
Alignment:
Q  951 gttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaac 1050  Q
    ||||||||| |||||| |||||||||||||| |||||||||||| | | |||||||| |||||| |||| ||  ||||||||||||||||||||| |||     
T  36447550 gttttaggctttggtatacagattaagaaatggaatgaaataattactggatataactcttttattaaactg-tctttactttataagaaaaagataaaa 36447648  T
Q  1051 ttaaa 1055  Q
    |||||    
T  36447649 ttaaa 36447653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 951 - 1055
Target Start/End: Original strand, 41905874 - 41905977
Alignment:
Q  951 gttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaac 1050  Q
    ||||||||| |||  ||||||||||||||||  | ||||||||| ||| |||||||| ||||||||||| ||| | |||||||||||||||||||||||     
T  41905874 gttttaggctttgacacacagattaagaaatgaactgaaataatcattggatataacgcttttactaaactgc-ccttactttataagaaaaagacaaaa 41905972  T
Q  1051 ttaaa 1055  Q
    |||||    
T  41905973 ttaaa 41905977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 974 - 1055
Target Start/End: Complemental strand, 34733500 - 34733420
Alignment:
Q  974 taagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||  ||||||||||| |||||| ||||||||||||||||| | | | |||||||||||||||||||||||||||||    
T  34733500 taagaaatgaaatgaaataatcattagacataacacttttactaaactac-ccttactttataagaaaaagacaaacttaaa 34733420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 972 - 1055
Target Start/End: Original strand, 28044101 - 28044183
Alignment:
Q  972 attaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||||  ||||||||||| ||| ||||||||  |||||||||| ||| ||| ||||||||||||||||||||| |||||    
T  28044101 attaagaaataaaatgaaataatcattggatataacgtttttactaaactgccctt-actttataagaaaaagacaaaattaaa 28044183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 984 - 1055
Target Start/End: Original strand, 42259521 - 42259591
Alignment:
Q  984 aatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||| ||||| |||||| ||||||||||||||||| ||| ||| |||||||||||||||||||| ||||||    
T  42259521 aatgagataattattagacataacacttttactaaaatgccctt-actttataagaaaaagacaagcttaaa 42259591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 970 - 1043
Target Start/End: Original strand, 26527356 - 26527428
Alignment:
Q  970 agattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaa 1043  Q
    |||||||||||| ||||| |||||| |||||| ||||||| ||||||||| |||  ||||||||||||||||||    
T  26527356 agattaagaaatggaatgcaataatcattagacataacacctttactaaactgc-ttttactttataagaaaaa 26527428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 983 - 1022
Target Start/End: Original strand, 30833066 - 30833105
Alignment:
Q  983 gaatgaaataataattagatataacacttttactaaattg 1022  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  30833066 gaatgaaataattattagatataacacttttactaaattg 30833105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 841 - 896
Target Start/End: Original strand, 36245450 - 36245505
Alignment:
Q  841 ttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||| |||| ||||||||| | |||||||||||||||||||||||| |||||    
T  36245450 ttctagacaagatacatcaattactcaatgaatctaaaaagtcaattttttcttat 36245505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 837 - 887
Target Start/End: Complemental strand, 16861590 - 16861540
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagtcaatt 887  Q
    |||||| ||||||| || ||||||||||| |||||||||||||||||||||    
T  16861590 ctatttttagactatatacatcaattattcaatgaatctaaaaagtcaatt 16861540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 970 - 1055
Target Start/End: Original strand, 33056242 - 33056327
Alignment:
Q  970 agattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttacttta-taagaaaaagacaaacttaaa 1055  Q
    |||||||| |||  ||||||||||| |||| | ||||||||||||||||| ||| | |||||||| ||||||||||||||| |||||    
T  33056242 agattaaggaatgaaatgaaataatcattaaacataacacttttactaaactgc-ccttactttattaagaaaaagacaaatttaaa 33056327  T

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Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 1001 - 1055
Target Start/End: Original strand, 40207379 - 40207432
Alignment:
Q  1001 atataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||||||||||||||| ||| ||| |||||||||||||| ||||||||||||    
T  40207379 atataacacttttactaaactgccctt-actttataagaaaatgacaaacttaaa 40207432  T

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Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 966 - 1055
Target Start/End: Complemental strand, 32275394 - 32275306
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||| ||||||||||  ||||||||||| |||| | || ||  |||||||||| ||| |||||||||||||||||||  ||||||||||    
T  32275394 acacatattaagaaatgaaatgaaataatcattaaacatgacgtttttactaaactgc-ctttactttataagaaaaaatcaaacttaaa 32275306  T

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Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 973 - 1049
Target Start/End: Original strand, 32873127 - 32873203
Alignment:
Q  973 ttaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttacttta-taagaaaaagacaaa 1049  Q
    ||||||||||||||| |||||| ||||||||||||| ||||| |||||| | ||||| |||| ||||| |||||||||    
T  32873127 ttaagaaattgaatgcaataatcattagatataacatttttattaaattac-ctttattttagtaagagaaagacaaa 32873203  T

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Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 971 - 1055
Target Start/End: Original strand, 22627313 - 22627396
Alignment:
Q  971 gattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||||| |||  |||||||||||  ||| | ||||||| ||||||||| ||| ||||||||||||| || ||||||||||||||    
T  22627313 gattaaggaatgaaatgaaataatcgttaaacataacacatttactaaactgc-ctttactttataaaaataagacaaacttaaa 22627396  T

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Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 837 - 896
Target Start/End: Original strand, 27231903 - 27231962
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||||| |||| | ||||||||||| |||||||||||||||| || |||| |||||    
T  27231903 ctatttctaggctaggtacatcaattattgaatgaatctaaaaagttaactttttcttat 27231962  T

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Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 841 - 896
Target Start/End: Original strand, 28677391 - 28677446
Alignment:
Q  841 ttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||| |||| ||||||||| | ||| |||||||||||||||||||| |||||    
T  28677391 ttctagacaagatacatcaattactcaataaatctaaaaagtcaattttttcttat 28677446  T

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Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 841 - 896
Target Start/End: Complemental strand, 45533304 - 45533249
Alignment:
Q  841 ttctagactagattcatcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    |||||||| |||| ||| |||||  ||||||||||||||||||||||||| |||||    
T  45533304 ttctagacaagatacattaattacataatgaatctaaaaagtcaattttttcttat 45533249  T

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Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 855 - 896
Target Start/End: Complemental strand, 4925951 - 4925910
Alignment:
Q  855 catcaattatttaatgaatctaaaaagtcaatttttccttat 896  Q
    ||||||||| ||||||||||||||||||||| |||| |||||    
T  4925951 catcaattacttaatgaatctaaaaagtcaaatttttcttat 4925910  T

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Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 837 - 890
Target Start/End: Original strand, 28020070 - 28020123
Alignment:
Q  837 ctatttctagactagattcatcaattatttaatgaatctaaaaagtcaattttt 890  Q
    ||||||||||   |||| || ||||||||||||||||||||||| |||||||||    
T  28020070 ctatttctaggtcagatacaacaattatttaatgaatctaaaaaatcaattttt 28020123  T

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Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 966 - 1019
Target Start/End: Complemental strand, 40299037 - 40298984
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaa 1019  Q
    ||||| |||||| |||  ||||||||||||||| || |||||||||||||||||    
T  40299037 acacaaattaaggaatgaaatgaaataataattggacataacacttttactaaa 40298984  T

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Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 990 - 1055
Target Start/End: Original strand, 42010553 - 42010617
Alignment:
Q  990 ataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||| |||||| |||| | |||||||||| ||| ||| | |||||||||||||||||||||||||    
T  42010553 ataatcattagacataatatttttactaaactgccctt-attttataagaaaaagacaaacttaaa 42010617  T

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Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 966 - 1055
Target Start/End: Complemental strand, 42121741 - 42121653
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||||||||| |||  ||| ||||||| |||||| ||| ||||||||||||| ||  | ||||||||| ||||||||| | |||||||    
T  42121741 acacagattaaggaatgaaatcaaataatcattagacatatcacttttactaaactg-accttactttattagaaaaagatacacttaaa 42121653  T

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Target: scaffold0072 (Bit Score: 51; Significance: 1e-19; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 970 - 1055
Target Start/End: Original strand, 12040 - 12123
Alignment:
Q  970 agattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    |||||||| ||| |||||||||||| |||||| ||||||||||||||||| |  || |||||||||||||||||||||||||||||    
T  12040 agattaaggaatggaatgaaataatcattagacataacacttttactaaact--gccttactttataagaaaaagacaaacttaaa 12123  T

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Target: scaffold0119 (Bit Score: 48; Significance: 7e-18; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 948 - 1055
Target Start/End: Complemental strand, 1759 - 1653
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagaca 1047  Q
    |||| ||||||| || | ||| ||||||||||||  ||||||||||| ||| ||||||||  |||||||||||||| | |||||||||||||||||||||    
T  1759 gtcgctttaggctttagcacaaagattaagaaatataatgaaataattattggatataacgtttttactaaattgc-ccttactttataagaaaaagaca 1661  T
Q  1048 aacttaaa 1055  Q
    || |||||    
T  1660 aaattaaa 1653  T

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Target: scaffold0580 (Bit Score: 46; Significance: 1e-16; HSPs: 2)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 948 - 1049
Target Start/End: Complemental strand, 1790 - 1690
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagaca 1047  Q
    |||| ||||| |||||| ||| ||||||||||||  ||||||||||| ||| ||||||||| |||||||||| ||  | |||||||||||||||||||||    
T  1790 gtcgctttagacgttggcacatagattaagaaatgaaatgaaataatcattggatataacatttttactaaactg-accttactttataagaaaaagaca 1692  T
Q  1048 aa 1049  Q
    ||    
T  1691 aa 1690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 948 - 1049
Target Start/End: Complemental strand, 9529 - 9429
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagaca 1047  Q
    |||| ||||| |||||| ||| ||||||||||||  ||||||||||| ||| ||||||||| |||||||||| ||  | |||||||||||||||||||||    
T  9529 gtcgctttagacgttggcacatagattaagaaatgaaatgaaataatcattggatataacatttttactaaactg-accttactttataagaaaaagaca 9431  T
Q  1048 aa 1049  Q
    ||    
T  9430 aa 9429  T

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Target: scaffold0238 (Bit Score: 38; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 966 - 1055
Target Start/End: Original strand, 15994 - 16081
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaattgcgctttactttataagaaaaagacaaacttaaa 1055  Q
    ||||| ||||| ||||| ||||||||||| |||| |||||||| |||||||||| | | ||||||||||||| |||| ||||||||||||    
T  15994 acacatattaaaaaattaaatgaaataatcattatatataacatttttactaaactac-ctttactttataa-aaaatgacaaacttaaa 16081  T

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Target: scaffold0189 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 966 - 1019
Target Start/End: Original strand, 13022 - 13075
Alignment:
Q  966 acacagattaagaaattgaatgaaataataattagatataacacttttactaaa 1019  Q
    |||||||||||| |||  ||||||||||| |||||| |||||||||||||||||    
T  13022 acacagattaaggaatgaaatgaaataatcattagacataacacttttactaaa 13075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 32; Significance: 0.00000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 948 - 1019
Target Start/End: Complemental strand, 8365 - 8294
Alignment:
Q  948 gtcgttttaggcgttggtacacagattaagaaattgaatgaaataataattagatataacacttttactaaa 1019  Q
    |||| ||||||  |||| ||||||||||| |||| |||||||||||| ||| |||||||  |||||||||||    
T  8365 gtcgctttaggttttggcacacagattaaaaaatggaatgaaataatcattggatataaggcttttactaaa 8294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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