View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1391A-Insertion-14 (Length: 345)

Name: NF1391A-Insertion-14
Description: NF1391A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1391A-Insertion-14
NF1391A-Insertion-14
[»] chr2 (46 HSPs)
chr2 (8-337)||(522242-522572)
chr2 (210-274)||(227405-227469)
chr2 (210-274)||(3635325-3635389)
chr2 (210-274)||(4807811-4807875)
chr2 (210-274)||(12474929-12474993)
chr2 (210-274)||(17670684-17670748)
chr2 (210-274)||(28508894-28508958)
chr2 (210-274)||(30306248-30306312)
chr2 (210-274)||(451650-451714)
chr2 (210-274)||(3243655-3243719)
chr2 (210-274)||(7326162-7326226)
chr2 (214-274)||(10516751-10516811)
chr2 (210-274)||(12520064-12520128)
chr2 (210-274)||(25834894-25834958)
chr2 (210-274)||(38328372-38328436)
chr2 (217-274)||(41763045-41763102)
chr2 (214-274)||(9531602-9531662)
chr2 (210-274)||(17626288-17626352)
chr2 (210-274)||(31959737-31959801)
chr2 (214-274)||(38435172-38435232)
chr2 (210-274)||(38452688-38452752)
chr2 (210-274)||(39709203-39709267)
chr2 (214-274)||(41197229-41197289)
chr2 (214-274)||(43573132-43573192)
chr2 (210-267)||(38430100-38430157)
chr2 (210-274)||(2610804-2610868)
chr2 (210-274)||(3866288-3866352)
chr2 (210-274)||(8180996-8181060)
chr2 (214-274)||(11992110-11992170)
chr2 (210-274)||(12489804-12489868)
chr2 (210-274)||(12734916-12734980)
chr2 (210-274)||(25384685-25384749)
chr2 (210-274)||(36183667-36183731)
chr2 (223-274)||(15775847-15775898)
chr2 (214-273)||(19336896-19336955)
chr2 (216-274)||(12882047-12882105)
chr2 (214-272)||(33504444-33504502)
chr2 (214-274)||(3481374-3481434)
chr2 (214-274)||(8197543-8197603)
chr2 (214-274)||(8202303-8202363)
chr2 (214-274)||(9496086-9496146)
chr2 (214-274)||(11412930-11412990)
chr2 (210-274)||(15025710-15025774)
chr2 (214-274)||(18959131-18959191)
chr2 (210-274)||(35643164-35643228)
chr2 (210-274)||(44437723-44437787)
[»] chr3 (47 HSPs)
chr3 (210-274)||(7895882-7895946)
chr3 (210-274)||(5169048-5169112)
chr3 (210-274)||(12096707-12096771)
chr3 (210-274)||(25191593-25191657)
chr3 (210-274)||(311311-311375)
chr3 (210-274)||(31566163-31566227)
chr3 (210-274)||(47555334-47555398)
chr3 (210-274)||(48508451-48508515)
chr3 (210-274)||(53262357-53262421)
chr3 (210-273)||(41529977-41530040)
chr3 (211-274)||(45834602-45834665)
chr3 (212-286)||(31452951-31453025)
chr3 (210-274)||(48532173-48532238)
chr3 (210-274)||(22288-22352)
chr3 (210-274)||(31454227-31454291)
chr3 (214-274)||(37083294-37083354)
chr3 (210-274)||(40273207-40273271)
chr3 (210-274)||(47233598-47233662)
chr3 (210-274)||(52139016-52139080)
chr3 (210-274)||(52156086-52156150)
chr3 (210-274)||(53519796-53519860)
chr3 (214-271)||(19676086-19676143)
chr3 (210-274)||(2133614-2133678)
chr3 (210-274)||(28245653-28245717)
chr3 (210-274)||(35033362-35033426)
chr3 (214-274)||(45374479-45374539)
chr3 (210-274)||(49042153-49042217)
chr3 (214-274)||(49503570-49503630)
chr3 (210-274)||(51447719-51447783)
chr3 (223-274)||(35465758-35465809)
chr3 (214-272)||(52927852-52927910)
chr3 (210-268)||(54279236-54279294)
chr3 (245-274)||(237298-237327)
chr3 (214-271)||(35420489-35420545)
chr3 (245-274)||(35481179-35481208)
chr3 (229-274)||(39512778-39512823)
chr3 (245-274)||(41965829-41965858)
chr3 (214-274)||(15296127-15296187)
chr3 (214-274)||(21862743-21862803)
chr3 (214-274)||(24778611-24778671)
chr3 (210-274)||(38060930-38060994)
chr3 (214-274)||(45468795-45468855)
chr3 (214-274)||(46148248-46148308)
chr3 (214-274)||(48734149-48734209)
chr3 (214-274)||(52882664-52882724)
chr3 (214-274)||(54128599-54128659)
chr3 (210-274)||(54364978-54365041)
[»] chr1 (49 HSPs)
chr1 (210-274)||(34792351-34792415)
chr1 (210-274)||(1210961-1211025)
chr1 (210-274)||(9592950-9593014)
chr1 (210-274)||(25979233-25979297)
chr1 (210-274)||(29577468-29577532)
chr1 (210-274)||(30202132-30202196)
chr1 (210-274)||(44751700-44751764)
chr1 (210-274)||(49347395-49347459)
chr1 (210-274)||(37311757-37311821)
chr1 (210-274)||(38807673-38807737)
chr1 (210-274)||(44941778-44941842)
chr1 (210-274)||(52921296-52921360)
chr1 (214-275)||(37462877-37462938)
chr1 (210-274)||(3777262-3777326)
chr1 (210-274)||(4029338-4029402)
chr1 (210-274)||(15086138-15086202)
chr1 (210-274)||(22090312-22090376)
chr1 (214-274)||(25715328-25715388)
chr1 (210-274)||(28533683-28533747)
chr1 (214-270)||(38877349-38877405)
chr1 (214-274)||(41165502-41165562)
chr1 (214-274)||(41560449-41560509)
chr1 (210-274)||(42337772-42337836)
chr1 (210-274)||(43240381-43240445)
chr1 (215-274)||(4318847-4318906)
chr1 (215-274)||(46423218-46423277)
chr1 (215-274)||(51602277-51602336)
chr1 (216-274)||(696492-696550)
chr1 (212-274)||(40568412-40568474)
chr1 (210-274)||(4707223-4707286)
chr1 (214-274)||(8796429-8796489)
chr1 (214-274)||(21769713-21769773)
chr1 (210-274)||(24020269-24020333)
chr1 (214-274)||(28090696-28090756)
chr1 (214-274)||(52561591-52561651)
chr1 (223-274)||(10200308-10200359)
chr1 (223-274)||(43481800-43481851)
chr1 (216-274)||(32079179-32079237)
chr1 (214-271)||(6084195-6084252)
chr1 (221-274)||(10569073-10569126)
chr1 (229-274)||(38758022-38758067)
chr1 (214-274)||(2914125-2914185)
chr1 (214-274)||(4590534-4590594)
chr1 (215-271)||(6025826-6025882)
chr1 (210-274)||(8672134-8672198)
chr1 (214-274)||(34444576-34444636)
chr1 (214-274)||(37430422-37430482)
chr1 (210-274)||(39318345-39318408)
chr1 (210-274)||(51440767-51440831)
[»] scaffold0168 (1 HSPs)
scaffold0168 (210-274)||(28891-28955)
[»] chr8 (30 HSPs)
chr8 (210-274)||(11523725-11523789)
chr8 (210-274)||(14742084-14742148)
chr8 (210-274)||(42469729-42469793)
chr8 (210-274)||(25473405-25473469)
chr8 (210-274)||(36545365-36545429)
chr8 (210-274)||(44047534-44047598)
chr8 (210-274)||(44529441-44529505)
chr8 (210-273)||(12491141-12491204)
chr8 (214-274)||(1928589-1928649)
chr8 (210-274)||(36565243-36565307)
chr8 (210-273)||(44699682-44699745)
chr8 (214-272)||(45041320-45041378)
chr8 (214-274)||(490555-490615)
chr8 (226-274)||(1064952-1065000)
chr8 (210-274)||(10668499-10668563)
chr8 (214-274)||(12611717-12611777)
chr8 (210-274)||(15215414-15215478)
chr8 (224-272)||(26055651-26055699)
chr8 (210-274)||(42854006-42854070)
chr8 (214-274)||(45419455-45419515)
chr8 (210-273)||(8932919-8932982)
chr8 (210-267)||(43733422-43733479)
chr8 (210-274)||(7531646-7531710)
chr8 (210-274)||(21121362-21121425)
chr8 (210-274)||(23492250-23492314)
chr8 (214-274)||(32276905-32276965)
chr8 (214-274)||(35323993-35324053)
chr8 (214-274)||(35914603-35914663)
chr8 (210-274)||(36042414-36042478)
chr8 (214-274)||(39967501-39967561)
[»] chr7 (50 HSPs)
chr7 (210-274)||(11594176-11594240)
chr7 (210-274)||(12841277-12841341)
chr7 (210-274)||(28208330-28208394)
chr7 (210-274)||(31682604-31682668)
chr7 (210-274)||(33349808-33349872)
chr7 (210-274)||(39906374-39906438)
chr7 (210-274)||(44855176-44855240)
chr7 (210-273)||(6375084-6375147)
chr7 (211-274)||(48919329-48919392)
chr7 (210-280)||(34035150-34035220)
chr7 (210-274)||(29650600-29650664)
chr7 (210-274)||(31869104-31869168)
chr7 (210-274)||(37618161-37618225)
chr7 (210-274)||(38900173-38900236)
chr7 (210-274)||(40979930-40979994)
chr7 (210-274)||(43281890-43281954)
chr7 (210-274)||(45836484-45836548)
chr7 (210-269)||(35906208-35906267)
chr7 (212-274)||(40630652-40630714)
chr7 (213-274)||(32631783-32631844)
chr7 (214-271)||(33073149-33073206)
chr7 (210-274)||(2885724-2885788)
chr7 (210-274)||(27648996-27649060)
chr7 (210-274)||(34869636-34869700)
chr7 (210-274)||(36652208-36652272)
chr7 (210-277)||(24777177-24777244)
chr7 (210-273)||(45601692-45601755)
chr7 (212-274)||(22349838-22349900)
chr7 (220-274)||(31005431-31005485)
chr7 (229-274)||(36869239-36869284)
chr7 (210-275)||(46355857-46355922)
chr7 (214-274)||(6263479-6263539)
chr7 (214-274)||(9210706-9210766)
chr7 (214-274)||(21078137-21078197)
chr7 (214-274)||(28708601-28708661)
chr7 (210-274)||(38607208-38607272)
chr7 (214-274)||(42187661-42187721)
chr7 (211-274)||(7273317-7273380)
chr7 (231-274)||(12966253-12966296)
chr7 (212-275)||(31681021-31681084)
chr7 (223-274)||(33732061-33732112)
chr7 (213-274)||(34745966-34746027)
chr7 (229-274)||(43491543-43491588)
chr7 (214-274)||(1011266-1011326)
chr7 (214-274)||(5418294-5418354)
chr7 (214-274)||(25731476-25731536)
chr7 (210-274)||(31840446-31840510)
chr7 (214-274)||(36101779-36101839)
chr7 (214-274)||(47652767-47652827)
chr7 (210-274)||(49029492-49029555)
[»] chr5 (34 HSPs)
chr5 (210-274)||(29816598-29816662)
chr5 (212-274)||(408496-408558)
chr5 (210-271)||(30213791-30213852)
chr5 (210-274)||(2915498-2915562)
chr5 (210-274)||(3302060-3302124)
chr5 (210-274)||(4496600-4496664)
chr5 (210-274)||(10639518-10639582)
chr5 (210-274)||(12492386-12492450)
chr5 (210-274)||(13561388-13561452)
chr5 (210-274)||(28976861-28976925)
chr5 (212-274)||(14911390-14911452)
chr5 (214-274)||(20456993-20457053)
chr5 (214-269)||(38685187-38685242)
chr5 (210-268)||(1287587-1287645)
chr5 (210-275)||(3442872-3442937)
chr5 (210-274)||(16913884-16913949)
chr5 (210-270)||(5558357-5558417)
chr5 (210-274)||(24178726-24178790)
chr5 (214-274)||(27386560-27386620)
chr5 (210-274)||(28411892-28411956)
chr5 (214-274)||(38132556-38132616)
chr5 (214-274)||(42272697-42272757)
chr5 (215-274)||(42576231-42576290)
chr5 (212-274)||(2075475-2075537)
chr5 (212-274)||(2393095-2393156)
chr5 (216-274)||(14665934-14665992)
chr5 (216-274)||(16347382-16347440)
chr5 (210-271)||(2713152-2713213)
chr5 (245-274)||(3563417-3563446)
chr5 (220-273)||(39040982-39041035)
chr5 (245-274)||(43475490-43475519)
chr5 (214-274)||(1275484-1275544)
chr5 (210-270)||(9121084-9121144)
chr5 (214-274)||(28186784-28186844)
[»] chr4 (55 HSPs)
chr4 (214-274)||(1777019-1777079)
chr4 (210-274)||(6957814-6957878)
chr4 (210-274)||(23906299-23906363)
chr4 (210-274)||(31959816-31959880)
chr4 (214-274)||(48174095-48174155)
chr4 (210-274)||(52569517-52569581)
chr4 (212-274)||(50238617-50238679)
chr4 (212-274)||(50238703-50238765)
chr4 (210-274)||(436445-436509)
chr4 (210-274)||(19061937-19062001)
chr4 (210-274)||(27450182-27450246)
chr4 (210-274)||(27983409-27983473)
chr4 (210-274)||(48622545-48622609)
chr4 (210-274)||(49939736-49939800)
chr4 (213-274)||(19969400-19969461)
chr4 (210-274)||(8286655-8286719)
chr4 (210-274)||(12494879-12494943)
chr4 (210-274)||(19154865-19154929)
chr4 (210-274)||(21528504-21528568)
chr4 (210-274)||(32479254-32479318)
chr4 (214-274)||(34585702-34585762)
chr4 (210-274)||(43434140-43434204)
chr4 (210-274)||(56375506-56375570)
chr4 (215-274)||(30634108-30634167)
chr4 (210-264)||(4441069-4441123)
chr4 (217-274)||(15665324-15665381)
chr4 (210-271)||(33227425-33227486)
chr4 (210-274)||(21237074-21237138)
chr4 (210-274)||(26037507-26037571)
chr4 (210-274)||(31961268-31961332)
chr4 (214-274)||(32613650-32613710)
chr4 (210-274)||(32633408-32633472)
chr4 (214-274)||(45209207-45209267)
chr4 (210-274)||(50869882-50869946)
chr4 (214-274)||(55007966-55008026)
chr4 (223-274)||(4879111-4879162)
chr4 (214-273)||(15661875-15661934)
chr4 (223-274)||(25575053-25575104)
chr4 (229-279)||(26024847-26024897)
chr4 (210-271)||(33190853-33190914)
chr4 (229-274)||(39100538-39100583)
chr4 (229-274)||(46153943-46153988)
chr4 (213-274)||(46582828-46582888)
chr4 (229-274)||(56130405-56130450)
chr4 (210-274)||(2589288-2589352)
chr4 (218-274)||(7066501-7066557)
chr4 (223-271)||(7947166-7947214)
chr4 (214-274)||(20105520-20105580)
chr4 (214-274)||(29399024-29399084)
chr4 (214-274)||(37488311-37488371)
chr4 (210-274)||(47265197-47265261)
chr4 (223-271)||(50862860-50862908)
chr4 (214-274)||(51421950-51422010)
chr4 (214-274)||(51438665-51438725)
chr4 (210-274)||(51811282-51811344)
[»] scaffold1318 (1 HSPs)
scaffold1318 (210-274)||(547-611)
[»] scaffold0570 (1 HSPs)
scaffold0570 (210-274)||(950-1014)
[»] scaffold0024 (1 HSPs)
scaffold0024 (210-274)||(82934-82998)
[»] chr6 (23 HSPs)
chr6 (210-274)||(9706986-9707050)
chr6 (210-274)||(12890791-12890855)
chr6 (210-274)||(28085592-28085656)
chr6 (210-274)||(30789076-30789140)
chr6 (210-274)||(34143767-34143831)
chr6 (210-274)||(34156383-34156447)
chr6 (210-274)||(34934832-34934896)
chr6 (210-273)||(30031472-30031535)
chr6 (210-274)||(3206461-3206525)
chr6 (210-274)||(5258150-5258214)
chr6 (210-270)||(31819047-31819107)
chr6 (210-274)||(32756137-32756201)
chr6 (210-274)||(35043443-35043507)
chr6 (219-274)||(30679621-30679676)
chr6 (214-274)||(34507-34567)
chr6 (214-274)||(579638-579698)
chr6 (210-274)||(1615225-1615289)
chr6 (214-274)||(5096054-5096114)
chr6 (214-274)||(5897677-5897737)
chr6 (214-274)||(23888480-23888540)
chr6 (212-274)||(608379-608441)
chr6 (229-274)||(33730200-33730245)
chr6 (214-274)||(18130816-18130876)
[»] scaffold0157 (1 HSPs)
scaffold0157 (210-274)||(25534-25598)
[»] scaffold0041 (1 HSPs)
scaffold0041 (210-274)||(16794-16858)
[»] scaffold0018 (1 HSPs)
scaffold0018 (220-274)||(31694-31748)
[»] scaffold0692 (1 HSPs)
scaffold0692 (210-274)||(4852-4916)


Alignment Details
Target: chr2 (Bit Score: 299; Significance: 1e-168; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 8 - 337
Target Start/End: Original strand, 522242 - 522572
Alignment:
Q  8 ctatagttggtgcagatgggaaaatcaggctaccatggctcttattgatggaaatttgcaaggtaaacgacataaaaatcaaatgc-gcttcattgatga 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||  |||||||||||||    
T  522242 ctatagttggtgcagatgggaaaatcaggctaccatggctcttattgatggaaatttgcaaggtaaacatcatagaaatcaaatgttgcttcattgatga 522341  T
Q  107 caccaacctttgtactgttagaactttgtcaatgccaaaacaattgactgaagggaaaaatttccactgcttgtttctaatgtaataatttttcatcata 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  522342 caccaacctttgtactgttagaactttgtcaatgccaaaacaattgactgaagggaaaaatttccactgcttgtttctaatgtaataatttttcatcata 522441  T
Q  207 atcacactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtttctgttataatcacatctcatatactttaatt 306  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  522442 atcacactatggcgtcatttgatccatgtagcagatcacacttaatgggataaggctttgttgttgtttctgttataatcacatctcatatactttaatt 522541  T
Q  307 gattttgttctacaggtaagaacaacaaagt 337  Q
    |||||||||||||||||||||||||||||||    
T  522542 gattttgttctacaggtaagaacaacaaagt 522572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 227405 - 227469
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  227405 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 227469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 3635389 - 3635325
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  3635389 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 3635325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 4807811 - 4807875
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  4807811 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 4807875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 12474993 - 12474929
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  12474993 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 12474929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 17670684 - 17670748
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  17670684 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 17670748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 28508894 - 28508958
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  28508894 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 28508958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 30306248 - 30306312
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  30306248 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 30306312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 451714 - 451650
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| ||||| |||||||||||||||||    
T  451714 acactatggcgtcatttgatccatgtagccgaccccacttagtgggacaaggcttggttgttgtt 451650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 3243719 - 3243655
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||| ||||| || | |||||| |||||||||||||||||||||||    
T  3243719 acactatggcgtcatttgatccaggtagccgaccccacttagtgggataaggcttggttgttgtt 3243655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 7326226 - 7326162
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| ||||||||||  | | |||||| |||||||||||||||||||||||    
T  7326226 acactatggcgtcatttgatccatgtagccaaccccacttagtgggataaggcttggttgttgtt 7326162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 10516811 - 10516751
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  10516811 tatggcgtaatttgatccatgtagctgatctcacttagtgggataaggcttggttgttgtt 10516751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 12520128 - 12520064
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||| ||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  12520128 acactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 12520064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 25834894 - 25834958
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||| |||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  25834894 acactgtggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 25834958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 38328436 - 38328372
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||| ||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  38328436 acactatggcttcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 38328372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 274
Target Start/End: Complemental strand, 41763102 - 41763045
Alignment:
Q  217 ggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  41763102 ggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 41763045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 9531662 - 9531602
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  9531662 tatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 9531602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 17626288 - 17626352
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || |  ||||  |||||||||||||||||||||||    
T  17626288 acactatggcgtcatttgttccatgtagccgaaccaactttgtgggataaggcttggttgttgtt 17626352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 31959737 - 31959801
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||| | ||||| ||||||||||||| | |||||| | |||||||||||||||||||||    
T  31959737 acactatggcataatttgatccatgtagcagaccccacttagtaggataaggcttggttgttgtt 31959801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 38435172 - 38435232
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| |||||||||| |||| |||||| ||| |||||||||||||||||||    
T  38435172 tatggcgtaatttgatccatgtagccgatcccacttagtggcataaggcttggttgttgtt 38435232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 38452752 - 38452688
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||| |||||| | |||||||||| || | |||||| |||||||||||||||||||||||    
T  38452752 acactatggtgtcattcgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 38452688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 39709267 - 39709203
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||| ||||| |||||||||| || | |||||| ||||||| |||||||||||||||    
T  39709267 acactatggcgtaatttgatccatgtagccgaccccacttagtgggatatggcttggttgttgtt 39709203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 41197289 - 41197229
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||| |||||||||  || | ||||| ||||||||||||||||||||||||    
T  41197289 tatggcgtcatttgatccatgtagtcgaccccacttgatgggataaggcttggttgttgtt 41197229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 43573192 - 43573132
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  43573192 tatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 43573132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 267
Target Start/End: Original strand, 38430100 - 38430157
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggt 267  Q
    |||||||||||||||||| |||||||||| || | |||||| || |||||||||||||    
T  38430100 acactatggcgtcatttgatccatgtagccgaccccacttagtgagataaggcttggt 38430157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 2610804 - 2610868
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||| ||||| |||||||| | || | |||||| || ||||||||||||||||||||    
T  2610804 acactatggcgttatttgatccatgtaaccgaccccacttagtgagataaggcttggttgttgtt 2610868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 3866288 - 3866352
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| | ||||||| |||||||||| || | |||||| | |||||||||||||||||||||    
T  3866288 acactatgacatcatttgatccatgtagccgaccccacttagtaggataaggcttggttgttgtt 3866352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 8180996 - 8181060
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||| | |||||||| |||||||||| || | |||||| ||||||||||||| |||||||||    
T  8180996 acactatagtgtcatttgatccatgtagccgaccccacttagtgggataaggcttcgttgttgtt 8181060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 11992170 - 11992110
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| |||||||||| || | |||||| ||| |||||||||||||||||||    
T  11992170 tatggcgttatttgatccatgtagctgaccccacttagtggaataaggcttggttgttgtt 11992110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 12489868 - 12489804
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||| ||||||| |||| | |||||||| || | |||||| |||||||||||||||||||||||    
T  12489868 acactttggcgtcgtttgattcatgtagccgaccccacttagtgggataaggcttggttgttgtt 12489804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 12734916 - 12734980
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||| || ||||| |||||||||  || | |||||| |||||||||||||||||||||||    
T  12734916 acactatggtgtaatttgatccatgtagtcgaccccacttagtgggataaggcttggttgttgtt 12734980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 25384685 - 25384749
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||| ||||| ||||||||||  | | |||||| |||||||||||||||| ||||||    
T  25384685 acactatggcgtaatttgatccatgtagccaacctcacttagtgggataaggcttggtggttgtt 25384749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 36183667 - 36183731
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||| | |||||| |||||||||| || | |||||| | |||||||||||||||||||||    
T  36183667 acactatggtgccatttgatccatgtagccgaccccacttagtaggataaggcttggttgttgtt 36183731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 274
Target Start/End: Complemental strand, 15775898 - 15775847
Alignment:
Q  223 atttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||| || | |||||| ||| |||||||||||||||||||    
T  15775898 atttggtccatgtagccgaccccacttagtggaataaggcttggttgttgtt 15775847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 19336955 - 19336896
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgt 273  Q
    |||||||| ||||| ||||||||||  ||| |||||| |||||||| |||||||||||||    
T  19336955 tatggcgtaatttgatccatgtagccaatcccacttattgggataaagcttggttgttgt 19336896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 274
Target Start/End: Complemental strand, 12882105 - 12882047
Alignment:
Q  216 tggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||| ||||| ||||||||||  | | |||||| |||||||||||||||||||||||    
T  12882105 tggcgtaatttgatccatgtagcctacctcacttagtgggataaggcttggttgttgtt 12882047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 33504444 - 33504502
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttg 272  Q
    |||||||| ||||| ||||| |||| || | |||||| |||||||||||||||||||||    
T  33504444 tatggcgtaatttgatccatctagccgaccccacttagtgggataaggcttggttgttg 33504502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 3481374 - 3481434
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| |||||||||| || | |||||| | ||| |||||||||||||||||    
T  3481374 tatggcgtaatttgatccatgtagctgaccccacttagttggaaaaggcttggttgttgtt 3481434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 8197603 - 8197543
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||| |||| |||||||||| || |  ||||| |||||||| ||||||||||||||    
T  8197603 tatggcgtcgtttgatccatgtagccgaccctacttagtgggataatgcttggttgttgtt 8197543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 8202363 - 8202303
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||| |||| |||||||||| || |  ||||| |||||||| ||||||||||||||    
T  8202363 tatggcgtcgtttgatccatgtagccgaccctacttagtgggataatgcttggttgttgtt 8202303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 9496086 - 9496146
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| ||||||||||  | | |||||| ||||| |||||||||||||||||    
T  9496086 tatggcgtaatttgatccatgtagccaaccccacttagtgggacaaggcttggttgttgtt 9496146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 11412930 - 11412990
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||| || ||||| |||||||||| || | |||||| | |||||||||||||||||||||    
T  11412930 tatggtgtaatttgatccatgtagccgaactcacttagtaggataaggcttggttgttgtt 11412990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 15025710 - 15025774
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||| || |||| | |||||||| |||   ||||| |||||||||||||||||||||||    
T  15025710 acactatggcatcgtttgattcatgtagccgatgcaacttagtgggataaggcttggttgttgtt 15025774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 18959131 - 18959191
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||| | ||||| |||||||||| || | |||||| ||||||||||||||||| |||||    
T  18959131 tatggcataatttgatccatgtagctgaccccacttagtgggataaggcttggttattgtt 18959191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 35643164 - 35643228
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| | ||||||  | |||||||| || | |||||| |||||||||||||||||||||||    
T  35643164 acactatgacatcatttaatacatgtagccgaccccacttagtgggataaggcttggttgttgtt 35643228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 44437787 - 44437723
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||||||  |||  | |||||||| || | |||||| |||||||||||||||||||||||    
T  44437787 acactatggcgttgtttaattcatgtagccgaccccacttagtgggataaggcttggttgttgtt 44437723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 5e-19; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 7895946 - 7895882
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | ||||||||||||||||||||||||||||||    
T  7895946 acactatggcgtcatttgatccatgtagccgaccccacttaatgggataaggcttggttgttgtt 7895882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 5169048 - 5169112
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  5169048 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 5169112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 12096771 - 12096707
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  12096771 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 12096707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 25191593 - 25191657
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| |||| |||||| |||||||| ||||||||||||||    
T  25191593 acactatggcgtcatttgatccatgtagctgatcccacttagtgggataatgcttggttgttgtt 25191657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 311375 - 311311
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| | |||||||| || | |||||| |||||||||||||||||||||||    
T  311375 acactatggcgtcatttgatacatgtagccgaccccacttagtgggataaggcttggttgttgtt 311311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 31566227 - 31566163
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||| |||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  31566227 acactatggtgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 31566163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 47555398 - 47555334
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| ||||||||||  | | |||||| |||||||||||||||||||||||    
T  47555398 acactatggcgtcatttgatccatgtagccaaccccacttagtgggataaggcttggttgttgtt 47555334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 48508451 - 48508515
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||| ||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  48508451 acactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 48508515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 53262357 - 53262421
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| || ||||||| || | |||||| |||||||||||||||||||||||    
T  53262357 acactatggcgtcatttgatctatgtagccgaccccacttagtgggataaggcttggttgttgtt 53262421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 273
Target Start/End: Original strand, 41529977 - 41530040
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgt 273  Q
    |||||||||||| ||||| |||||||||| || | |||||| ||||||||||||||||||||||    
T  41529977 acactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgt 41530040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 274
Target Start/End: Complemental strand, 45834665 - 45834602
Alignment:
Q  211 cactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||||||||||| ||||||||||  | | |||||| |||||||||||||||||||||||    
T  45834665 cactatggcgtcatttgatccatgtagccaaccccacttagtgggataaggcttggttgttgtt 45834602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 286
Target Start/End: Complemental strand, 31453025 - 31452951
Alignment:
Q  212 actatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtttctgttataatc 286  Q
    ||||||||||| |||| | ||||||||||| | |||||| ||| |||||||||||||||||||| |||| |||||    
T  31453025 actatggcgtcgtttgattcatgtagcagaccccacttagtggaataaggcttggttgttgtttttgttgtaatc 31452951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 48532173 - 48532238
Alignment:
Q  210 acactatggcgtcatttggtcca-tgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||| |||||| || | |||||| |||||||||||||||||||||||    
T  48532173 acactatggcgtcatttgatccaatgtagccgaccccacttagtgggataaggcttggttgttgtt 48532238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 22288 - 22352
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| || ||||||| || | |||||| |||||||| ||||||||||||||    
T  22288 acactatggcgtcatttgatctatgtagccgaccccacttagtgggataaagcttggttgttgtt 22352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 31454291 - 31454227
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| | ||| |||| || | |||||| |||||||||||||||||||||||    
T  31454291 acactatggcgtcatttgattcatttagccgaccccacttagtgggataaggcttggttgttgtt 31454227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 37083354 - 37083294
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||||||| |||||| || | |||||| |||||||||||||||||||||||    
T  37083354 tatggcgtaatttggtccttgtagccgaccccacttagtgggataaggcttggttgttgtt 37083294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 40273271 - 40273207
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| ||||| |||| ||||||||||||    
T  40273271 acactatggcgtcatttgatccatgtagccgaccccacttagtgggaaaaggtttggttgttgtt 40273207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 47233662 - 47233598
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| | |||||||| || | || ||| |||||||||||||||||||||||    
T  47233662 acactatggcgtcatttgattcatgtagccgaccccagttagtgggataaggcttggttgttgtt 47233598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 52139016 - 52139080
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||| ||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  52139016 acactatgacgttatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 52139080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 52156150 - 52156086
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||||||||| || |||||||||| || | |||||| |||||||||||| ||||||||||    
T  52156150 acactatggcgtcatctgatccatgtagccgaccccacttagtgggataaggctcggttgttgtt 52156086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 53519796 - 53519860
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||||||| |||||||||| || | |||||| || ||||||||||||||||||||    
T  53519796 acactatgacgtcatttgatccatgtagccgaccccacttagtgagataaggcttggttgttgtt 53519860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 271
Target Start/End: Complemental strand, 19676143 - 19676086
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgtt 271  Q
    |||||||| ||||| |||||||||| || | |||||| ||||||||||||||||||||    
T  19676143 tatggcgtgatttgatccatgtagctgaccccacttagtgggataaggcttggttgtt 19676086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 2133678 - 2133614
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||| ||||| ||||||||   || | |||||| |||||||||||||||||||||||    
T  2133678 acactatggcgtgatttgatccatgtactcgaccccacttagtgggataaggcttggttgttgtt 2133614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 28245653 - 28245717
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||||||| |||||||||| |||| |||||| || ||||||||||| ||| ||||    
T  28245653 acactatgacgtcatttgatccatgtagccgatcccacttagtgagataaggcttgattgctgtt 28245717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 35033362 - 35033426
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||| ||||| |||||||||| || | ||  || |||||||||||||||||||||||    
T  35033362 acactatggcgttatttgatccatgtagccgacctcatctagtgggataaggcttggttgttgtt 35033426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 45374539 - 45374479
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||  |||||||||| || | |||||| |||||||||||||||||||||||    
T  45374539 tatggcgtaatttaatccatgtagctgaccccacttagtgggataaggcttggttgttgtt 45374479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 49042153 - 49042217
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||| ||||| |||||||||| || | |||||  || ||||||||||||||||||||    
T  49042153 acactatggcgtaatttgatccatgtagccgaccccacttggtgagataaggcttggttgttgtt 49042217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 49503630 - 49503570
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| |||||||||| || |  ||||| |||||||||||||||||||||||    
T  49503630 tatggcgtaatttgatccatgtagccgaccctacttagtgggataaggcttggttgttgtt 49503570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 51447783 - 51447719
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| | |||||||| |  | || ||| |||||||||||||||||||||||    
T  51447783 acactatggcgtcatttgattcatgtagccggccccatttagtgggataaggcttggttgttgtt 51447719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 274
Target Start/End: Original strand, 35465758 - 35465809
Alignment:
Q  223 atttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||| |||||||||| || | ||||||||||||||||| ||||||||||||    
T  35465758 atttgatccatgtagctgacctcacttaatgggataaggattggttgttgtt 35465809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 52927910 - 52927852
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttg 272  Q
    |||||| | ||||| |||||||||| || | |||||| |||||||||||||||||||||    
T  52927910 tatggcataatttgatccatgtagccgaccccacttagtgggataaggcttggttgttg 52927852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 268
Target Start/End: Original strand, 54279236 - 54279294
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggtt 268  Q
    |||||||||||||||||| || ||||||| |||| ||||||||  |||||| |||||||    
T  54279236 acactatggcgtcatttgatcaatgtagccgatcccacttaataagataagacttggtt 54279294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 274
Target Start/End: Complemental strand, 237327 - 237298
Alignment:
Q  245 cacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||||||||||||||||||||||||    
T  237327 cacttaatgggataaggcttggttgttgtt 237298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 35420489 - 35420545
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgtt 271  Q
    |||||||| |||||||||||||||| || | || ||| ||||||||||||||||||||    
T  35420489 tatggcgtaatttggtccatgtagc-gaccccatttagtgggataaggcttggttgtt 35420545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 274
Target Start/End: Original strand, 35481179 - 35481208
Alignment:
Q  245 cacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||||||||||||||||||||||||    
T  35481179 cacttaatgggataaggcttggttgttgtt 35481208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 274
Target Start/End: Original strand, 39512778 - 39512823
Alignment:
Q  229 tccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||| || | |||||| |||||||||||||||||||||||    
T  39512778 tccatgtagccgaccccacttagtgggataaggcttggttgttgtt 39512823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 274
Target Start/End: Original strand, 41965829 - 41965858
Alignment:
Q  245 cacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||||||||||||||||||||||||    
T  41965829 cacttaatgggataaggcttggttgttgtt 41965858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 15296127 - 15296187
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||| || ||||| ||||||| || || | |||||| |||||||||||||||||||||||    
T  15296127 tatggtgtaatttgatccatgtggccgaccccacttagtgggataaggcttggttgttgtt 15296187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 21862803 - 21862743
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||| |||||||| |||||||||| || | |||||| || ||||||||||| ||||||||    
T  21862803 tatggtgtcatttgatccatgtagccgaccccacttagtgagataaggcttgcttgttgtt 21862743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 24778671 - 24778611
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||| || ||||| |||||||||| || | |||||| ||||||||||||||| |||||||    
T  24778671 tatggtgtaatttgatccatgtagccgaccccacttagtgggataaggcttggctgttgtt 24778611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 38060930 - 38060994
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||| ||||||| ||||| |||||||||| || | |||||| |||||||||  ||||||||||||    
T  38060930 acaccatggcgtaatttgatccatgtagccgaccccacttagtgggataagaattggttgttgtt 38060994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 45468795 - 45468855
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||| |||| || ||||| | |||| |||||| ||| |||||||||||||||||||    
T  45468795 tatggcgtcgtttgatctatgtaaccgatcccacttagtggaataaggcttggttgttgtt 45468855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 46148248 - 46148308
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| |||||||||| || | |||||| ||||  |||||||||||||||||    
T  46148248 tatggcgtaatttgatccatgtagccgaccccacttagtgggtcaaggcttggttgttgtt 46148308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 48734209 - 48734149
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| | ||| |||||||||| || | |||||| |||||||||||||| ||||||||    
T  48734209 tatggcgtaagttgatccatgtagctgaccccacttagtgggataaggcttgattgttgtt 48734149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 52882724 - 52882664
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| ||||||||||  | | |||||| ||||| |||||||||||||||||    
T  52882724 tatggcgtaatttgatccatgtagccaaccccacttagtgggagaaggcttggttgttgtt 52882664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 54128599 - 54128659
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||| | ||||| |||||||||  || | |||||| |||||||||||||||||||||||    
T  54128599 tatggcataatttgatccatgtaggcgaccccacttagtgggataaggcttggttgttgtt 54128659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 54365041 - 54364978
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||| ||||| |||||||||| || |||||| | ||||||||||||||| |||||||    
T  54365041 acactatgacgtaatttgatccatgtagccgaccacact-agtgggataaggcttggctgttgtt 54364978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 34792415 - 34792351
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | ||||||||||||||||||||||||||||||    
T  34792415 acactatggcgtcatttgatccatgtagccgaccccacttaatgggataaggcttggttgttgtt 34792351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 1210961 - 1211025
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  1210961 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 1211025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 9592950 - 9593014
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||| |||||||||| |||||||||| || | ||||||||||||||||||||||||||||||    
T  9592950 acactatagcgtcatttgatccatgtagccgaccccacttaatgggataaggcttggttgttgtt 9593014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 25979297 - 25979233
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  25979297 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 25979233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 29577468 - 29577532
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  29577468 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 29577532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 30202196 - 30202132
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  30202196 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 30202132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 44751700 - 44751764
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  44751700 acactatggcgtcatttgatccatgtagccgacctcacttagtgggataaggcttggttgttgtt 44751764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 49347459 - 49347395
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  49347459 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 49347395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 37311821 - 37311757
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| ||||| |||||||||||||||||    
T  37311821 acactatggcgtcatttgatccatgtagccgaccccacttagtgggaaaaggcttggttgttgtt 37311757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 38807737 - 38807673
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||| ||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  38807737 acactatggcgtaatttgttccatgtagccgaccccacttagtgggataaggcttggttgttgtt 38807673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 44941842 - 44941778
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||| ||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  44941842 acactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 44941778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 52921296 - 52921360
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||| |||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  52921296 acactattgcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 52921360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 275
Target Start/End: Complemental strand, 37462938 - 37462877
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgttt 275  Q
    |||||||| ||||| |||||||||| || | |||||| ||||||||||||||||||||||||    
T  37462938 tatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgttt 37462877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 3777326 - 3777262
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||||||| |||||||||| |||| |||||| | |||||| ||||||||||||||    
T  3777326 acactatgacgtcatttgatccatgtagccgatcccacttagtaggataatgcttggttgttgtt 3777262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 4029338 - 4029402
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||||| |||||| |||||||||| || | |||||| ||||||||| |||||||||||||    
T  4029338 acactatggcgacatttgatccatgtagccgaccccacttagtgggataagacttggttgttgtt 4029402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 15086138 - 15086202
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||||||| ||||||||||  | | |||||| |||||||||||||||||||||||    
T  15086138 acactatgacgtcatttgatccatgtagccaaccccacttagtgggataaggcttggttgttgtt 15086202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 22090312 - 22090376
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||||||| |||||||||| || | |||| | |||||||||||||||||||||||    
T  22090312 acactatgacgtcatttgatccatgtagccgaccccactaagtgggataaggcttggttgttgtt 22090376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 25715388 - 25715328
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  25715388 tatggcgtaatttgatccatgtagccgacctcacttagtgggataaggcttggttgttgtt 25715328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 28533683 - 28533747
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||||||| |||||||||| || | |||||| ||||||||| |||||||||||||    
T  28533683 acactatgacgtcatttgatccatgtagccgaccccacttagtgggataagacttggttgttgtt 28533747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 38877405 - 38877349
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgt 270  Q
    |||||||||||||| |||||||||| || | |||||| |||||||||||||||||||    
T  38877405 tatggcgtcatttgatccatgtagccgaacccacttagtgggataaggcttggttgt 38877349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 41165502 - 41165562
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||| |||||||||| || | |||||| ||||| |||||||||||||||||    
T  41165502 tatggcgtcatttgatccatgtagccgaccccacttagtgggaaaaggcttggttgttgtt 41165562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 41560449 - 41560509
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  41560449 tatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 41560509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 42337772 - 42337836
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||| ||||||| ||||||||||  | | |||||| |||||||||||||||||||||||    
T  42337772 acactatggcatcatttgatccatgtagccaaccccacttagtgggataaggcttggttgttgtt 42337836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 43240445 - 43240381
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| | |||||||| || | |||||| ||||||||||||| |||||||||    
T  43240445 acactatggcgtcatttgattcatgtagccgacctcacttagtgggataaggcttagttgttgtt 43240381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 4318906 - 4318847
Alignment:
Q  215 atggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||||||| |||||||||| || | |||||| ||||| |||||||||||||||||    
T  4318906 atggcgtcatttgatccatgtagccgaccccacttagtgggaaaaggcttggttgttgtt 4318847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 46423277 - 46423218
Alignment:
Q  215 atggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||||||| |||||||||| || | |||||| |||||||||||| ||||||||||    
T  46423277 atggcgtcatttgatccatgtagccgaccccacttagtgggataaggctcggttgttgtt 46423218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 51602277 - 51602336
Alignment:
Q  215 atggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||||||| ||||||||||  | | |||||| |||||||||||||||||||||||    
T  51602277 atggcgtcatttgatccatgtagccaaccccacttagtgggataaggcttggttgttgtt 51602336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 274
Target Start/End: Original strand, 696492 - 696550
Alignment:
Q  216 tggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||| || ||||||| || | |||||| |||||||||||||||||||||||    
T  696492 tggcgtcatttgatcaatgtagccgaccccacttagtgggataaggcttggttgttgtt 696550  T

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Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 274
Target Start/End: Complemental strand, 40568474 - 40568412
Alignment:
Q  212 actatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||| ||||| ||||||||||  | | |||||| |||||||||||||||||||||||    
T  40568474 actatggcgtaatttgatccatgtagccaaccccacttagtgggataaggcttggttgttgtt 40568412  T

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Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 4707286 - 4707223
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||| ||||| || ||||||| || | |||||| |||||||||||||||||||||||    
T  4707286 acactatggcgtaatttgatc-atgtagccgaccccacttagtgggataaggcttggttgttgtt 4707223  T

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Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 8796429 - 8796489
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||  |||||||||| || | |||||| |||||||||||||||||||||||    
T  8796429 tatggcgtaatttaatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 8796489  T

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Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 21769773 - 21769713
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| |||||||||| || | |||||| || ||||||||||||||||||||    
T  21769773 tatggcgtaatttgatccatgtagccgaccccacttagtgtgataaggcttggttgttgtt 21769713  T

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Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 24020333 - 24020269
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||| |||  | | |||||  |||||||||||||||||||||||    
T  24020333 acactatggcgtcatttgatccatgcagccaaccccactttgtgggataaggcttggttgttgtt 24020269  T

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Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 28090756 - 28090696
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| |||||||||| || | |||||| ||||||||| |||||||||||||    
T  28090756 tatggcgtaatttgatccatgtagccgaccccacttagtgggataagacttggttgttgtt 28090696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 52561651 - 52561591
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||  ||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  52561651 tatggcgaaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 52561591  T

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Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 274
Target Start/End: Complemental strand, 10200359 - 10200308
Alignment:
Q  223 atttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||| |||||||||| || | ||||||||||||||| ||||||||||||||    
T  10200359 atttgatccatgtagccgacctcacttaatgggataatgcttggttgttgtt 10200308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 274
Target Start/End: Complemental strand, 43481851 - 43481800
Alignment:
Q  223 atttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  43481851 atttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 43481800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 274
Target Start/End: Complemental strand, 32079237 - 32079179
Alignment:
Q  216 tggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||| || ||||||| || | |||||  |||||||||||||||||||||||    
T  32079237 tggcgtcatttgatcgatgtagccgaccccacttggtgggataaggcttggttgttgtt 32079179  T

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Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 6084195 - 6084252
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgtt 271  Q
    |||||||| ||||| ||||||||   |||| |||||| ||||||||||||||||||||    
T  6084195 tatggcgtaatttgatccatgtatttgatctcacttagtgggataaggcttggttgtt 6084252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 274
Target Start/End: Complemental strand, 10569126 - 10569073
Alignment:
Q  221 tcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||| |||||||||| | |  ||||||| ||||||||||||||||||||||    
T  10569126 tcatttgatccatgtagccggttccacttaaagggataaggcttggttgttgtt 10569073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 274
Target Start/End: Complemental strand, 38758067 - 38758022
Alignment:
Q  229 tccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||| || | |||||| |||||||||||||||||||||||    
T  38758067 tccatgtagccgaccccacttagtgggataaggcttggttgttgtt 38758022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 2914185 - 2914125
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||  |||| ||||||||||  | | |||||| |||||||||||||||||||||||    
T  2914185 tatggcgtactttgatccatgtagccaaccccacttagtgggataaggcttggttgttgtt 2914125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 4590594 - 4590534
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||| || ||||| |||||||||| || | |||||| |||||||||| ||||||||||||    
T  4590594 tatggtgtaatttgatccatgtagccgaccccacttagtgggataaggtttggttgttgtt 4590534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 6025826 - 6025882
Alignment:
Q  215 atggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgtt 271  Q
    ||||||||||||| |||||||||| |||  |||||| ||||||||  ||||||||||    
T  6025826 atggcgtcatttgatccatgtagccgattccacttagtgggataatacttggttgtt 6025882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 8672134 - 8672198
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||| |||||||||| ||||| ||||  | | |||||| | |||||||||||||||||||||    
T  8672134 acactatagcgtcatttgatccatatagccaaccccacttagtaggataaggcttggttgttgtt 8672198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 34444576 - 34444636
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||| || ||||| || ||||||| || | |||||| |||||||||||||||||||||||    
T  34444576 tatggtgtaatttgatctatgtagccgaccccacttagtgggataaggcttggttgttgtt 34444636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 37430482 - 37430422
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||  |||| ||||| |||| |||| |||||| || ||||||||||||||||||||    
T  37430482 tatggcgtagtttgatccatatagccgatcccacttagtgagataaggcttggttgttgtt 37430422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 39318345 - 39318408
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||| ||||| |||||||||| || | | |||| |||||||||||||| ||||||||    
T  39318345 acactatggcgtaatttgatccatgtagccga-cccgcttagtgggataaggcttgtttgttgtt 39318408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 51440831 - 51440767
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||| ||||||||||| | |||||| | || | |||||| ||||||||| |||||||||||||    
T  51440831 acactacggcgtcatttgattcatgtaaccgaccccacttagtgggataagacttggttgttgtt 51440767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 28955 - 28891
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  28955 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 28891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 11523789 - 11523725
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  11523789 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 11523725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 14742148 - 14742084
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  14742148 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 14742084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 42469793 - 42469729
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  42469793 acactatggcgtcatttgatccatgtagctgaccccacttattgggataaggcttggttgttgtt 42469729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 25473469 - 25473405
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||| |||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  25473469 acactatagcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 25473405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 36545365 - 36545429
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  36545365 acactatgacgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 36545429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 44047598 - 44047534
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||| ||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  44047598 acaccatggcgtcatttgatccatgtagctgaccccacttagtgggataaggcttggttgttgtt 44047534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 44529441 - 44529505
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||| ||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  44529441 acactatggcatcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 44529505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 273
Target Start/End: Complemental strand, 12491204 - 12491141
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgt 273  Q
    |||||||||||||||||| |||||||||| || | |||||| ||||||||||||| ||||||||    
T  12491204 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttagttgttgt 12491141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 1928649 - 1928589
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  1928649 tatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 1928589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 36565307 - 36565243
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||| ||||| |||||||||| || | |||||| |||||||||||| ||||||||||    
T  36565307 acactatggcgttatttgatccatgtagccgaccccacttagtgggataaggctcggttgttgtt 36565243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 273
Target Start/End: Original strand, 44699682 - 44699745
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgt 273  Q
    |||||||||||| ||||| ||| ||||||||| | |||||| ||||| ||||||||||||||||    
T  44699682 acactatggcgtaatttgatccctgtagcagaccccacttagtgggaaaaggcttggttgttgt 44699745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 45041378 - 45041320
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttg 272  Q
    |||||||| ||||| |||||||||| || | |||||| |||||||||||||||||||||    
T  45041378 tatggcgtaatttgatccatgtagctgaccccacttagtgggataaggcttggttgttg 45041320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 490555 - 490615
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| |||||||||| || | |||||| |||||||||||||| ||||||||    
T  490555 tatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttgtttgttgtt 490615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 274
Target Start/End: Original strand, 1064952 - 1065000
Alignment:
Q  226 tggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||||||| || | |||||| |||||||||||||||||||||||    
T  1064952 tggtccatgtagccgaccccacttagtgggataaggcttggttgttgtt 1065000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 10668563 - 10668499
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||  |||||||| || ||||||| || | |||||| |||||||||||||||||||||||    
T  10668563 acactatgaggtcatttgatcgatgtagccgacctcacttagtgggataaggcttggttgttgtt 10668499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 12611717 - 12611777
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||| ||| |||| |||||||||| |||| || ||| |||||||||||||||||||||||    
T  12611717 tatggtgtcgtttgatccatgtagccgatcccaattagtgggataaggcttggttgttgtt 12611777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 15215478 - 15215414
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| |||||| || |||||||||| || | |||||| | |||||||||||||||||||||    
T  15215478 acactatgacgtcatatgatccatgtagccgaccccacttagtaggataaggcttggttgttgtt 15215414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 272
Target Start/End: Original strand, 26055651 - 26055699
Alignment:
Q  224 tttggtccatgtagcagatcacacttaatgggataaggcttggttgttg 272  Q
    |||| |||||||||| |||| |||||| |||||||||||||||||||||    
T  26055651 tttgatccatgtagccgatcccacttagtgggataaggcttggttgttg 26055699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 42854070 - 42854006
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | || ||| |||||||||| ||||| ||||||    
T  42854070 acactatggcgtcatttgatccatgtagccgaccccatttagtgggataaggtttggtggttgtt 42854006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 45419455 - 45419515
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||| || ||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  45419455 tatggtgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 45419515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 210 - 273
Target Start/End: Original strand, 8932919 - 8932982
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgt 273  Q
    |||||||||||||||||| |||||||||| || | |||||| ||  |||| |||||||||||||    
T  8932919 acactatggcgtcatttgatccatgtagctgaccccacttagtgaaataaagcttggttgttgt 8932982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 267
Target Start/End: Original strand, 43733422 - 43733479
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggt 267  Q
    ||||||||||||| |||  | |||||||| |||| |||||| ||||||||||||||||    
T  43733422 acactatggcgtcgtttcattcatgtagccgatcccacttagtgggataaggcttggt 43733479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 7531710 - 7531646
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||| ||| |||| | |||||||| || | |||||| | |||||||||||||||||||||    
T  7531710 acactatggtgtcgtttgattcatgtagccgaactcacttagtaggataaggcttggttgttgtt 7531646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 21121362 - 21121425
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||| ||||| || ||||||| || | |||||| ||||| |||||||||||||||||    
T  21121362 acactatggcgtaatttgatc-atgtagccgaccccacttagtgggaaaaggcttggttgttgtt 21121425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 23492250 - 23492314
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||| |||||||  |||||||||| || | |||||| || ||||||||||| ||||||||    
T  23492250 acactatggtgtcatttaatccatgtagccgaccccacttagtgagataaggcttgtttgttgtt 23492314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 32276905 - 32276965
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| |||||||||  || | |||||| |||||||| ||||||||||||||    
T  32276905 tatggcgtaatttgatccatgtagacgaacccacttagtgggataaagcttggttgttgtt 32276965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 35323993 - 35324053
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||| ||| ||||| |||| ||||| || | |||||| |||||||||||||||||||||||    
T  35323993 tatgacgtaatttgatccacgtagccgaccccacttagtgggataaggcttggttgttgtt 35324053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 35914663 - 35914603
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| |||||||||| || | |||||| || |||||| |||||||||||||    
T  35914663 tatggcgtaatttgatccatgtagctgaccccacttagtgagataagacttggttgttgtt 35914603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 36042414 - 36042478
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||||||| |||||||||| || | || ||||||||| |||  ||||||||||||    
T  36042414 acactatgacgtcatttgatccatgtagcggaccccaattaatgggaaaagatttggttgttgtt 36042478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 39967561 - 39967501
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||  |||| |||||||||| |||| |||||| || ||||| ||||||||||||||    
T  39967561 tatggcgtagtttgatccatgtagccgatcccacttattgtgataatgcttggttgttgtt 39967501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 11594176 - 11594240
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  11594176 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 11594240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 12841341 - 12841277
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  12841341 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 12841277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 28208394 - 28208330
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  28208394 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 28208330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 31682668 - 31682604
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  31682668 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 31682604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 33349872 - 33349808
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||| |||||||||| |||||||||| || | ||||||||||||||||||||||||||||||    
T  33349872 acactatagcgtcatttgatccatgtagccgacctcacttaatgggataaggcttggttgttgtt 33349808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 39906438 - 39906374
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  39906438 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 39906374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 44855240 - 44855176
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||| |||||||||||||||| || | |||||| |||||||||||||||||||||||    
T  44855240 acactatggcgtaatttggtccatgtagccgaccccacttagtgggataaggcttggttgttgtt 44855176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 210 - 273
Target Start/End: Original strand, 6375084 - 6375147
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgt 273  Q
    |||||||||||||||||| |||||||||| || | |||||| ||||||||||||||||||||||    
T  6375084 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgt 6375147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 211 - 274
Target Start/End: Original strand, 48919329 - 48919392
Alignment:
Q  211 cactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||||||||||| |||||||||  || | ||||||||||||||||||||||||||||||    
T  48919329 cactatggcgtcatttgatccatgtagtcgaccccacttaatgggataaggcttggttgttgtt 48919392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 34035220 - 34035150
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtttctgtt 280  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||| |||||||||||||||| |||||    
T  34035220 acactatggcgtcatttgatccatgtagccgaccccacttagtgggattaggcttggttgttgttgctgtt 34035150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 29650600 - 29650664
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||| ||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  29650600 acactaaggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 29650664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 31869168 - 31869104
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||| |||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  31869168 acactctggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 31869104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 37618161 - 37618225
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||| |||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  37618161 acactatggtgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 37618225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 38900173 - 38900236
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  38900173 acactatggcgtcatttgatccatgtagccgacc-cacttagtgggataaggcttggttgttgtt 38900236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 40979994 - 40979930
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||| ||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  40979994 acactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 40979930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 43281890 - 43281954
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| ||||| |||||||||||||||||    
T  43281890 acactatggcgtcatttgatccatgtagccgaccccacttagtgggacaaggcttggttgttgtt 43281954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 45836548 - 45836484
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||| ||||||||||    
T  45836548 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggctcggttgttgtt 45836484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 269
Target Start/End: Complemental strand, 35906267 - 35906208
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttg 269  Q
    |||||||||||||||||| |||||||||| || | |||||| ||||||||||||||||||    
T  35906267 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 35906208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 274
Target Start/End: Original strand, 40630652 - 40630714
Alignment:
Q  212 actatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||| |||||||||| || | |||||| ||||| |||||||||||||||||    
T  40630652 actatggcgtcatttgatccatgtagccgaccccacttagtgggaaaaggcttggttgttgtt 40630714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 274
Target Start/End: Original strand, 32631783 - 32631844
Alignment:
Q  213 ctatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||||||||| || ||||||| || | |||||| |||||||||||||||||||||||    
T  32631783 ctatggcgtcatttgatctatgtagccgaccccacttagtgggataaggcttggttgttgtt 32631844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 271
Target Start/End: Original strand, 33073149 - 33073206
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgtt 271  Q
    |||| ||||||||| |||||||||| |||| |||||| ||||||||||||||||||||    
T  33073149 tatgacgtcatttgatccatgtagccgatcccacttagtgggataaggcttggttgtt 33073206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 2885788 - 2885724
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||| || ||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  2885788 acactatggtgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 2885724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 27648996 - 27649060
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||| |||||| ||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  27648996 acactgtggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 27649060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 34869636 - 34869700
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || |  | ||| |||||||||||||||||||||||    
T  34869636 acactatggcgtcatttgatccatgtagccgaccctaattagtgggataaggcttggttgttgtt 34869700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 36652208 - 36652272
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||| ||||| ||||    
T  36652208 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggctcggttgctgtt 36652272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 277
Target Start/End: Original strand, 24777177 - 24777244
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtttct 277  Q
    |||||||| ||||||||| | |||||||| ||||  ||||| |||||||| |||||||||||||||||    
T  24777177 acactatgacgtcatttgattcatgtagccgatcctacttagtgggataaagcttggttgttgtttct 24777244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 273
Target Start/End: Original strand, 45601692 - 45601755
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgt 273  Q
    ||||||||| || ||||| |||||||||| || | |||||| ||||||||||||||||||||||    
T  45601692 acactatggtgtaatttgatccatgtagctgaactcacttagtgggataaggcttggttgttgt 45601755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 274
Target Start/End: Original strand, 22349838 - 22349900
Alignment:
Q  212 actatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||| |||||||||  || | |||||| |||||||||||||| ||||||||    
T  22349838 actatggcgtcatttgatccatgtagtcgaccccacttagtgggataaggcttgattgttgtt 22349900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 274
Target Start/End: Original strand, 31005431 - 31005485
Alignment:
Q  220 gtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  31005431 gtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 31005485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 274
Target Start/End: Complemental strand, 36869284 - 36869239
Alignment:
Q  229 tccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||| || | ||||||||||||||||||||||||||||||    
T  36869284 tccatgtagccgaccccacttaatgggataaggcttggttgttgtt 36869239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 46355922 - 46355857
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgttt 275  Q
    |||||||| | ||||||| |||||||||| || | |||||| || |||||||||||||||||||||    
T  46355922 acactatgccatcatttgatccatgtagccgaccccacttagtgagataaggcttggttgttgttt 46355857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 6263479 - 6263539
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||| | ||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  6263479 tatggcataatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 6263539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 9210766 - 9210706
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| |||||||||| || | |||||| ||||||||||||| |||||||||    
T  9210766 tatggcgtaatttgatccatgtagctgaccccacttagtgggataaggcttcgttgttgtt 9210706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 21078137 - 21078197
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||| |||||||||| ||   || ||| |||||||||||||||||||||||    
T  21078137 tatggcgtcatttgatccatgtagccgacttcatttagtgggataaggcttggttgttgtt 21078197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 28708601 - 28708661
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| |||||||||| || | |||||| |||||||||||||||||| ||||    
T  28708601 tatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgatgtt 28708661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 38607208 - 38607272
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||||||| |||| |||||||||| ||   |||||| |||| ||||||||||||||||||    
T  38607208 acactatggcgtcgtttgatccatgtagccgactccacttagtgggttaaggcttggttgttgtt 38607272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 42187661 - 42187721
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| |||||||||| || | |||||| ||||||||||||| |||||||||    
T  42187661 tatggcgtaatttgatccatgtagccgaccccacttagtgggataaggctttgttgttgtt 42187721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 211 - 274
Target Start/End: Original strand, 7273317 - 7273380
Alignment:
Q  211 cactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||| ||| ||||| |||||||||| || | |||||| |||||||||||||| ||||||||    
T  7273317 cactatgacgtaatttgatccatgtagccgaccccacttagtgggataaggcttgattgttgtt 7273380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 231 - 274
Target Start/End: Original strand, 12966253 - 12966296
Alignment:
Q  231 catgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| |||| |||||| |||||||||||||||||||||||    
T  12966253 catgtagccgatcccacttagtgggataaggcttggttgttgtt 12966296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 275
Target Start/End: Complemental strand, 31681084 - 31681021
Alignment:
Q  212 actatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgttt 275  Q
    |||||| ||| ||||| |||||||||| || | |||||| ||||| ||||||||||||||||||    
T  31681084 actatgacgtaatttgatccatgtagccgaccccacttagtgggaaaaggcttggttgttgttt 31681021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 274
Target Start/End: Original strand, 33732061 - 33732112
Alignment:
Q  223 atttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||| |||||||||| | || |||||| |||||||||||||||||||||||    
T  33732061 atttgatccatgtagccggtcccacttagtgggataaggcttggttgttgtt 33732112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 274
Target Start/End: Original strand, 34745966 - 34746027
Alignment:
Q  213 ctatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||  |||| | |||||||| || | |||||| |||||||||||||||||||||||    
T  34745966 ctatggcgttgtttgattcatgtagccgaccccacttagtgggataaggcttggttgttgtt 34746027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 274
Target Start/End: Original strand, 43491543 - 43491588
Alignment:
Q  229 tccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||| || | |||||| |||||||||||||||||||||||    
T  43491543 tccatgtagccgaccccacttagtgggataaggcttggttgttgtt 43491588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 1011266 - 1011326
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||| || ||||| || ||||||| || | |||||| |||||||||||||||||||||||    
T  1011266 tatggtgtaatttgatctatgtagccgaccccacttagtgggataaggcttggttgttgtt 1011326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 5418294 - 5418354
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| |||||||||  || | || ||| |||||||||||||||||||||||    
T  5418294 tatggcgtaatttgatccatgtagtcgaccccatttagtgggataaggcttggttgttgtt 5418354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 25731536 - 25731476
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| || |||||||||| | |  ||||||||||||| |||||||||||||    
T  25731536 tatggcgtaatttgatcaatgtagcagacctcgtttaatgggataagacttggttgttgtt 25731476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 31840446 - 31840510
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||||||| |||| | ||||||||  | |  ||||| |||||||||||||||||||||||    
T  31840446 acactatggcgtcgtttgattcatgtagcctaccctacttagtgggataaggcttggttgttgtt 31840510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 36101839 - 36101779
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||| ||| ||||| |||||||||  || | |||||| |||||||||||||||||||||||    
T  36101839 tatgacgtaatttgatccatgtagttgaccccacttagtgggataaggcttggttgttgtt 36101779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 47652767 - 47652827
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| | ||| ||| |||||| || | |||||| |||||||||||||||||||||||    
T  47652767 tatggcgtaacttgatccctgtagccgaccccacttagtgggataaggcttggttgttgtt 47652827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 49029492 - 49029555
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| ||||||||||  | | |||||| ||||||| ||| |||||||||||    
T  49029492 acactatggcgtcatttgatccatgtagccaaccccacttagtgggatacggc-tggttgttgtt 49029555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 29816598 - 29816662
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  29816598 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 29816662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 274
Target Start/End: Complemental strand, 408558 - 408496
Alignment:
Q  212 actatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  408558 actatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 408496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 30213791 - 30213852
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgtt 271  Q
    |||||||||||||||||| |||||||||| || | |||||| ||||||||||||||||||||    
T  30213791 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgtt 30213852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 2915562 - 2915498
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| ||||||||||||||||| |||||    
T  2915562 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttattgtt 2915498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 3302060 - 3302124
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||| ||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  3302060 acactacggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 3302124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 4496600 - 4496664
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||| ||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  4496600 acactatggcatcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 4496664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 10639518 - 10639582
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||  |||||||||||||||||||||||    
T  10639518 acactatggcgtcatttgatccatgtagccgaccccactttgtgggataaggcttggttgttgtt 10639582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 12492450 - 12492386
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| | |||||||| || | |||||| |||||||||||||||||||||||    
T  12492450 acactatggcgtcatttgatgcatgtagccgaccccacttagtgggataaggcttggttgttgtt 12492386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 13561452 - 13561388
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||| ||||||||    
T  13561452 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttgtttgttgtt 13561388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 28976925 - 28976861
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| | |||||||| || | |||||| |||||||||||||||||||||||    
T  28976925 acactatggcgtcatttgattcatgtagccgaccccacttagtgggataaggcttggttgttgtt 28976861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 212 - 274
Target Start/End: Original strand, 14911390 - 14911452
Alignment:
Q  212 actatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||| |||||||||| || | |||||||||| |||||| ||||||||||||    
T  14911390 actatggcgtcatttgatccatgtagccgaccccacttaatggaataaggtttggttgttgtt 14911452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 20456993 - 20457053
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||| |||||||||| || | |||||| |||||||||||||| ||||||||    
T  20456993 tatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttgattgttgtt 20457053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 214 - 269
Target Start/End: Original strand, 38685187 - 38685242
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttg 269  Q
    |||||||||||||| |||||||||| || | |||||| ||||||||||||||||||    
T  38685187 tatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttg 38685242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 268
Target Start/End: Complemental strand, 1287645 - 1287587
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggtt 268  Q
    |||||||||||||| ||| |||||||||| || | |||||| |||||||||||||||||    
T  1287645 acactatggcgtcagttgatccatgtagccgaccccacttagtgggataaggcttggtt 1287587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 275
Target Start/End: Complemental strand, 3442937 - 3442872
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgttt 275  Q
    ||||||||||||| |||| | |||||||| || | |||||| ||| ||||||||||||||||||||    
T  3442937 acactatggcgtcgtttgattcatgtagccgaccccacttagtggcataaggcttggttgttgttt 3442872  T

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Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 16913949 - 16913884
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcac-acttaatgggataaggcttggttgttgtt 274  Q
    |||| ||||||||||||| |||||||||| || | | ||||| |||||||||||||||||||||||    
T  16913949 acaccatggcgtcatttgatccatgtagccgacccccacttagtgggataaggcttggttgttgtt 16913884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 270
Target Start/End: Original strand, 5558357 - 5558417
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgt 270  Q
    |||||||||| | ||||| |||||||||| || | |||||| |||||||||||||||||||    
T  5558357 acactatggcataatttgatccatgtagccgaccccacttagtgggataaggcttggttgt 5558417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 24178726 - 24178790
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||| ||||||| || ||||||| || | |||||||||  |||||||||||||||||||    
T  24178726 acactatggcatcatttgatctatgtagccgaccccacttaatgaaataaggcttggttgttgtt 24178790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 27386560 - 27386620
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| |||||||||| || | |||||| ||||||||||| |||||||||||    
T  27386560 tatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcatggttgttgtt 27386620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 28411892 - 28411956
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||||||  |||| | |||||||| || | |||||| |||||||||||||||||||||||    
T  28411892 acactatggcgttgtttgattcatgtagccgaccccacttagtgggataaggcttggttgttgtt 28411956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 38132556 - 38132616
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| ||||||| || || | |||||| |||||||||||||||||||||||    
T  38132556 tatggcgtaatttgatccatgtggccgaccccacttagtgggataaggcttggttgttgtt 38132616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 42272697 - 42272757
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||| |||||||||| || | |||||| ||||||||||||  |||||||||    
T  42272697 tatggcgtcatttgatccatgtagctgaccccacttagtgggataaggctaagttgttgtt 42272757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 215 - 274
Target Start/End: Original strand, 42576231 - 42576290
Alignment:
Q  215 atggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||| ||||| |||||||||| || |  ||||| |||||||||||||||||||||||    
T  42576231 atggcgtaatttgatccatgtagccgacccgacttagtgggataaggcttggttgttgtt 42576290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 274
Target Start/End: Complemental strand, 2075537 - 2075475
Alignment:
Q  212 actatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||| | ||||||||  | | |||||| |||||||||||||| ||||||||    
T  2075537 actatggcgtcatttgattcatgtagccaaccccacttagtgggataaggcttgattgttgtt 2075475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 274
Target Start/End: Original strand, 2393095 - 2393156
Alignment:
Q  212 actatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||  ||||||| |||||||||| |||| ||||||||||||||| |||| |||||||||    
T  2393095 actatggtatcatttgatccatgtagccgatcccacttaatgggataaagctt-gttgttgtt 2393156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 274
Target Start/End: Original strand, 14665934 - 14665992
Alignment:
Q  216 tggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||| ||||| || ||||||| || | |||||| |||||||||||||||||||||||    
T  14665934 tggcgtaatttgatctatgtagccgaccccacttagtgggataaggcttggttgttgtt 14665992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 274
Target Start/End: Complemental strand, 16347440 - 16347382
Alignment:
Q  216 tggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||| |||||||||| || |  ||||| ||||||||| |||||||||||||    
T  16347440 tggcgtcatttgatccatgtagccgaccctacttagtgggataagacttggttgttgtt 16347382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 2713152 - 2713213
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgtt 271  Q
    |||||||||| || |||| | |||||||| || | |||||| ||||||||||||||||||||    
T  2713152 acactatggcatcgtttgattcatgtagccgagcccacttagtgggataaggcttggttgtt 2713213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 274
Target Start/End: Complemental strand, 3563446 - 3563417
Alignment:
Q  245 cacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||||||||||||||||||||||||    
T  3563446 cacttaatgggataaggcttggttgttgtt 3563417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 273
Target Start/End: Original strand, 39040982 - 39041035
Alignment:
Q  220 gtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgt 273  Q
    |||||||| |||||||||| || | |||||||||||||||| |||| |||||||    
T  39040982 gtcatttgatccatgtagccgaccccacttaatgggataagacttgattgttgt 39041035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 274
Target Start/End: Original strand, 43475490 - 43475519
Alignment:
Q  245 cacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||||||||||||||||||||||||    
T  43475490 cacttaatgggataaggcttggttgttgtt 43475519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 1275484 - 1275544
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||| ||||||||| |||||||||| || | |||||| ||||||||||| | |||||||||    
T  1275484 tatgacgtcatttgatccatgtagccgaccccacttagtgggataaggcatagttgttgtt 1275544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 270
Target Start/End: Complemental strand, 9121144 - 9121084
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgt 270  Q
    |||||||||| || |||| | |||||||| || | |||||| |||||||||||||||||||    
T  9121144 acactatggcatcgtttgattcatgtagccgacctcacttagtgggataaggcttggttgt 9121084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 28186844 - 28186784
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||| |||| |||||| ||| || |  ||| |||||||||||||||||||||||||    
T  28186844 tatggcgtcgtttgatccatgcagccgaccctactcaatgggataaggcttggttgttgtt 28186784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 1777079 - 1777019
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||| |||||||||| || | ||||||||||||||||||||||||||||||    
T  1777079 tatggcgtcatttgatccatgtagccgaccccacttaatgggataaggcttggttgttgtt 1777019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 6957814 - 6957878
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||||||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  6957814 acactatgacgtcatttgatccatgtagccgatcccacttagtgggataaggcttggttgttgtt 6957878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 23906363 - 23906299
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  23906363 acactatggcgtcatttgatccatgtagctgaccccacttagtgggataaggcttggttgttgtt 23906299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 31959880 - 31959816
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  31959880 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 31959816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 48174155 - 48174095
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||| ||||||||||||| | |||||| |||||||||||||||||||||||    
T  48174155 tatggcgtcatttgatccatgtagcagaccccacttagtgggataaggcttggttgttgtt 48174095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 52569581 - 52569517
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  52569581 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 52569517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 274
Target Start/End: Complemental strand, 50238679 - 50238617
Alignment:
Q  212 actatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  50238679 actatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 50238617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 274
Target Start/End: Complemental strand, 50238765 - 50238703
Alignment:
Q  212 actatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  50238765 actatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 50238703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 436445 - 436509
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||| ||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  436445 acactatggcatcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 436509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 19062001 - 19061937
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | ||| || |||||||||||||||||||||||    
T  19062001 acactatggcgtcatttgatccatgtagccgaccccacctagtgggataaggcttggttgttgtt 19061937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 27450246 - 27450182
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||||||| ||||    
T  27450246 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgctgtt 27450182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 27983409 - 27983473
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||||||| |||||||||| |||| || |||||||||||||| ||||||||||||    
T  27983409 acactatgacgtcatttgatccatgtagccgatcccaattaatgggataaggtttggttgttgtt 27983473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 48622609 - 48622545
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||  |||||||||| || | |||||| |||||||||||||||||||||||    
T  48622609 acactatggcgtcatttaatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 48622545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 49939800 - 49939736
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||| ||||||||||    
T  49939800 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggctcggttgttgtt 49939736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 274
Target Start/End: Original strand, 19969400 - 19969461
Alignment:
Q  213 ctatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||||||||| |||||||||| || | |||||| |||||||||||| ||||||||||    
T  19969400 ctatggcgtcatttgatccatgtagccgaccccacttagtgggataaggctcggttgttgtt 19969461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 8286655 - 8286719
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||||||| |||||||||| |  | |||||| |||||||||||||||||||||||    
T  8286655 acactatgacgtcatttgatccatgtagccgcccccacttagtgggataaggcttggttgttgtt 8286719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 12494879 - 12494943
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||||||  |||||||||| || | |||||| |||||||||||||||||||||||    
T  12494879 acactatgacgtcatttaatccatgtagcggaccccacttagtgggataaggcttggttgttgtt 12494943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 19154929 - 19154865
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||| ||||| |||||| ||| || | |||||| |||||||||||||||||||||||    
T  19154929 acactatggcgttatttgatccatgcagctgaccccacttagtgggataaggcttggttgttgtt 19154865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 21528504 - 21528568
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||| | |||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  21528504 acactatggtggcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 21528568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 32479254 - 32479318
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| ||| | |||||||||||||||||    
T  32479254 acactatggcgtcatttgatccatgtagccgaccccacttagtggaaaaaggcttggttgttgtt 32479318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 34585702 - 34585762
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||| ||||||||||  | | |||||| |||||||||||||||||||||||    
T  34585702 tatggcgtcatttgatccatgtagcttaacccacttagtgggataaggcttggttgttgtt 34585762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 43434140 - 43434204
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||| ||||||||||| |||||||||  || | |||||| |||||||||||||||||||||||    
T  43434140 acactacggcgtcatttgatccatgtagtcgagcccacttagtgggataaggcttggttgttgtt 43434204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 56375506 - 56375570
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||||||| |||||||||| || | |||||| ||||||||| |||||||||||||    
T  56375506 acactatgacgtcatttgatccatgtagccgacctcacttagtgggataagacttggttgttgtt 56375570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 274
Target Start/End: Complemental strand, 30634167 - 30634108
Alignment:
Q  215 atggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||| ||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  30634167 atggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 30634108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 264
Target Start/End: Original strand, 4441069 - 4441123
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggctt 264  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||    
T  4441069 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggctt 4441123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 217 - 274
Target Start/End: Original strand, 15665324 - 15665381
Alignment:
Q  217 ggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||| ||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  15665324 ggcgtaatttgatccatgtagctgaccccacttagtgggataaggcttggttgttgtt 15665381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 33227425 - 33227486
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgtt 271  Q
    |||||||| ||||||||| |||||||||| |||| ||| || ||| ||||||||||||||||    
T  33227425 acactatgacgtcatttgatccatgtagccgatcccacctagtggaataaggcttggttgtt 33227486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 21237074 - 21237138
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| | ||||||||  | | |||||| |||||||||| ||||||||||||    
T  21237074 acactatggcgtcatttgatacatgtagccaaccccacttagtgggataaggattggttgttgtt 21237138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 26037571 - 26037507
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||| ||| | |||||||||| || | |||||| |||||||||| ||||||||||||    
T  26037571 acactatggcgtaattggatccatgtagccgaccccacttagtgggataaggtttggttgttgtt 26037507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 31961332 - 31961268
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| |||| |||| | |||||||| || | |||||| |||||||||||||||||||||||    
T  31961332 acactatgacgtcgtttgattcatgtagccgacctcacttagtgggataaggcttggttgttgtt 31961268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 32613650 - 32613710
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||| |||| |||| ||||||||||  |||||||||||||||||| |||||| ||||||||    
T  32613650 tatgacgtcgtttgatccatgtagccaatcacacttaatgggatatggcttgattgttgtt 32613710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 32633472 - 32633408
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| | ||||||||  | | |||||| ||||| |||||||||||||||||    
T  32633472 acactatggcgtcatttgatacatgtagccaaccccacttagtgggaaaaggcttggttgttgtt 32633408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 45209267 - 45209207
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||  |||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  45209267 tatggcgtagtttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 45209207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 50869946 - 50869882
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||||||| |||| | |||| ||| || | |||||| |||||||||||||||||||||||    
T  50869946 acactatggcgtcgtttgattcatgcagctgaccccacttagtgggataaggcttggttgttgtt 50869882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 55007966 - 55008026
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||| ||| ||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  55007966 tatgacgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 55008026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 274
Target Start/End: Complemental strand, 4879162 - 4879111
Alignment:
Q  223 atttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  4879162 atttgatccatgtagccgacctcacttactgggataaggcttggttgttgtt 4879111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 15661934 - 15661875
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgt 273  Q
    |||||||| ||||| |||||||||| || | |||||| |||||||||| |||||||||||    
T  15661934 tatggcgtaatttgatccatgtagccgaccccacttagtgggataaggtttggttgttgt 15661875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 274
Target Start/End: Original strand, 25575053 - 25575104
Alignment:
Q  223 atttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||| ||||||||||||| | || ||| |||||||||||||||||||||||    
T  25575053 atttgatccatgtagcagaccccatttagtgggataaggcttggttgttgtt 25575104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 279
Target Start/End: Complemental strand, 26024897 - 26024847
Alignment:
Q  229 tccatgtagcagatcacacttaatgggataaggcttggttgttgtttctgt 279  Q
    |||||||||| || | |||||| ||||||||||||||||||||||| ||||    
T  26024897 tccatgtagccgacctcacttagtgggataaggcttggttgttgttgctgt 26024847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 271
Target Start/End: Complemental strand, 33190914 - 33190853
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgtt 271  Q
    |||||||| |||||||||  ||||||||| || | ||| || ||||||||||||||||||||    
T  33190914 acactatgacgtcatttgacccatgtagccgaccccacctagtgggataaggcttggttgtt 33190853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 274
Target Start/End: Complemental strand, 39100583 - 39100538
Alignment:
Q  229 tccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||| || | |||||| |||||||||||||||||||||||    
T  39100583 tccatgtagccgaccccacttagtgggataaggcttggttgttgtt 39100538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 274
Target Start/End: Original strand, 46153943 - 46153988
Alignment:
Q  229 tccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||| || | |||||| |||||||||||||||||||||||    
T  46153943 tccatgtagccgaccccacttagtgggataaggcttggttgttgtt 46153988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 274
Target Start/End: Complemental strand, 46582888 - 46582828
Alignment:
Q  213 ctatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||||||||| ||||||||||  | | |||||| | |||||||||||||||||||||    
T  46582888 ctatggcgtcatttgatccatgtagcctacc-cacttagtaggataaggcttggttgttgtt 46582828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 274
Target Start/End: Original strand, 56130405 - 56130450
Alignment:
Q  229 tccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||| || | |||||| |||||||||||||||||||||||    
T  56130405 tccatgtagccgaccccacttagtgggataaggcttggttgttgtt 56130450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 2589288 - 2589352
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||||||| |||| | ||||||||  | | || ||| |||||||||||||||||||||||    
T  2589288 acactatggcgtcgtttgattcatgtagctaaccccagttagtgggataaggcttggttgttgtt 2589352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 274
Target Start/End: Complemental strand, 7066557 - 7066501
Alignment:
Q  218 gcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||| | |||||||| || | || ||| |||||||||||||||||||||||    
T  7066557 gcgtcatttgattcatgtagctgaccccatttagtgggataaggcttggttgttgtt 7066501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 7947166 - 7947214
Alignment:
Q  223 atttggtccatgtagcagatcacacttaatgggataaggcttggttgtt 271  Q
    ||||| |||||||||| || | |||||| ||||||||||||||||||||    
T  7947166 atttgatccatgtagccgaccccacttagtgggataaggcttggttgtt 7947214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 20105580 - 20105520
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||| ||||||||||  ||| |||||| | ||| |||||||||| ||||||    
T  20105580 tatggcgtcatttgatccatgtagccaatctcacttagtaggacaaggcttggtggttgtt 20105520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 29399024 - 29399084
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| | |||||||| || | |||||| ||||| |||||||||||||||||    
T  29399024 tatggcgtaatttgattcatgtagctgaccccacttagtgggaaaaggcttggttgttgtt 29399084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 37488311 - 37488371
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| ||||||||||    | |||||| |||||||||||||||||||||||    
T  37488311 tatggcgtaatttgatccatgtagccagccccacttagtgggataaggcttggttgttgtt 37488371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 47265261 - 47265197
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||| | || ||||| |||||||||| || | |||||| ||||||||||||||||| |||||    
T  47265261 acactatagtgtaatttgatccatgtagccgacctcacttagtgggataaggcttggttattgtt 47265197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 50862860 - 50862908
Alignment:
Q  223 atttggtccatgtagcagatcacacttaatgggataaggcttggttgtt 271  Q
    ||||| |||||||||| || | |||||| ||||||||||||||||||||    
T  50862860 atttgatccatgtagccgaccccacttagtgggataaggcttggttgtt 50862908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 51421950 - 51422010
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||| ||| ||||| ||||||||||  ||| |||||| |||||||| ||||||||||||||    
T  51421950 tatgacgtaatttgatccatgtagccaatctcacttagtgggataaagcttggttgttgtt 51422010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 51438665 - 51438725
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| |||||||||| || |  ||||  |||||||||||||||||||||||    
T  51438665 tatggcgtaatttgatccatgtagctgacccaactttgtgggataaggcttggttgttgtt 51438725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 51811344 - 51811282
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||||||| |||||||||| || | |||||| ||||||||||||| |||||||||    
T  51811344 acactatgacgtcatttgatccatgtagccgacc-cacttagtgggataaggctt-gttgttgtt 51811282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1318 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 547 - 611
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||||||||| ||||||||    
T  547 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataaggcttgattgttgtt 611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 1014 - 950
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | || ||| |||||||||||||||||||||||    
T  1014 acactatggcgtcatttgatccatgtagctgaccccatttagtgggataaggcttggttgttgtt 950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 82934 - 82998
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||||||| |||||||||| || | |||||||||| |||||||||||||||||||    
T  82934 acactatgacgtcatttgatccatgtagccgaccccacttaatggaataaggcttggttgttgtt 82998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 9706986 - 9707050
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||| ||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  9706986 acactatggcatcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 9707050  T

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Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 12890791 - 12890855
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||| ||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  12890791 acactatggcgtaatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 12890855  T

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Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 28085592 - 28085656
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||| |||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  28085592 acactatggtgtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 28085656  T

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Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 30789140 - 30789076
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||||||| |||||||||| ||||  ||||| |||||||||||||||||||||||    
T  30789140 acactatgacgtcatttgatccatgtagccgatcctacttagtgggataaggcttggttgttgtt 30789076  T

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Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 34143831 - 34143767
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||  || | |||||| |||||||||||||||||||||||    
T  34143831 acactatggcgtcatttgatccatgtagtcgaccccacttattgggataaggcttggttgttgtt 34143767  T

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Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 34156447 - 34156383
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||  || | |||||| |||||||||||||||||||||||    
T  34156447 acactatggcgtcatttgatccatgtagtcgaccccacttattgggataaggcttggttgttgtt 34156383  T

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Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 34934896 - 34934832
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||| ||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  34934896 acactatggcctcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 34934832  T

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Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 273
Target Start/End: Original strand, 30031472 - 30031535
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgt 273  Q
    |||||||||||| ||||| |||||||||| || | |||||| ||||||||||||||||||||||    
T  30031472 acactatggcgtaatttgatccatgtagccgacctcacttagtgggataaggcttggttgttgt 30031535  T

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Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 3206525 - 3206461
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| || | |||||| ||||||||| ||||||| |||||    
T  3206525 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataagacttggttattgtt 3206461  T

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Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 5258214 - 5258150
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||| ||||| || | |||||| ||||||||| |||||||||||||    
T  5258214 acactatggcgtcatttgatccacgtagccgaccccacttagtgggataagtcttggttgttgtt 5258150  T

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Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 270
Target Start/End: Original strand, 31819047 - 31819107
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgt 270  Q
    |||||||||||||||||| |||||||||| || | |||||| |||||||| ||||||||||    
T  31819047 acactatggcgtcatttgatccatgtagccgaccccacttagtgggataatgcttggttgt 31819107  T

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Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 32756137 - 32756201
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| |||||||||| |||| |||||| |||| |||| ||||| |||||||    
T  32756137 acactatggcgtcatttgatccatgtagccgatcccacttagtggggtaagacttggatgttgtt 32756201  T

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Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 35043507 - 35043443
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||||||| || ||||||| |||| ||||||| | ||||||||||||||||||||    
T  35043507 acactatgacgtcatttgatcaatgtagctgatcccacttaaagagataaggcttggttgttgtt 35043443  T

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Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 274
Target Start/End: Original strand, 30679621 - 30679676
Alignment:
Q  219 cgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||||||| || ||||||| |||| |||||||||||||||| |||||||||||||    
T  30679621 cgtcatttgatctatgtagccgatcccacttaatgggataagacttggttgttgtt 30679676  T

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Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 34567 - 34507
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| |||||||||| || | |||||| ||||||||| |||||||||||||    
T  34567 tatggcgtaatttgatccatgtagctgaccccacttagtgggataagacttggttgttgtt 34507  T

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Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 579638 - 579698
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| || ||||||| |||| |||||| |||||||| ||||||||||||||    
T  579638 tatggcgtaatttgatctatgtagccgatcccacttagtgggataaagcttggttgttgtt 579698  T

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Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 1615289 - 1615225
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||||||| |||||||||| || | || ||| ||||||||| |||||||||||||    
T  1615289 acactatgacgtcatttgatccatgtagccgacctcatttagtgggataagacttggttgttgtt 1615225  T

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Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 5096054 - 5096114
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||| || ||||||| |||| |||||| |||||||||| ||||||||||||    
T  5096054 tatggcgtaatttgatctatgtagccgatcccacttagtgggataaggtttggttgttgtt 5096114  T

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Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Original strand, 5897677 - 5897737
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||| ||| ||||| |||||||||| |||| |||||| |||||||||||||| ||||||||    
T  5897677 tatgacgtaatttgatccatgtagcggatcccacttagtgggataaggcttgattgttgtt 5897737  T

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Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 23888540 - 23888480
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||| || ||||| ||||||||||||| | ||| |||||||||||||||| |||||||||    
T  23888540 tatggtgtaatttgatccatgtagcagaccccacctaatgggataaggcttagttgttgtt 23888480  T

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Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 212 - 274
Target Start/End: Original strand, 608379 - 608441
Alignment:
Q  212 actatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||| ||||||||| |||||||||| || |  ||||| ||||||||| |||||||||||||    
T  608379 actatgacgtcatttgatccatgtagccgaccctacttagtgggataagacttggttgttgtt 608441  T

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Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 274
Target Start/End: Original strand, 33730200 - 33730245
Alignment:
Q  229 tccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||| || | |||||| |||||||||||||||||||||||    
T  33730200 tccatgtagccgaccccacttagtgggataaggcttggttgttgtt 33730245  T

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Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 274
Target Start/End: Complemental strand, 18130876 - 18130816
Alignment:
Q  214 tatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    ||||| || ||||| |||||||||| || | ||| |||||||||||||||| |||||||||    
T  18130876 tatggtgtaatttgatccatgtagccgaccccacctaatgggataaggcttagttgttgtt 18130816  T

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Target: scaffold0157 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Complemental strand, 25598 - 25534
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| ||||||||  |||||||||| || | |||||| |||||||||||||||||||||||    
T  25598 acactatgacgtcatttaatccatgtagcggaccccacttagtgggataaggcttggttgttgtt 25534  T

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Target: scaffold0041 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 16794 - 16858
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||||||||| || ||||||| ||   |||||| |||||||||||||||||||||||    
T  16794 acactatggcgtcatttgatctatgtagccgactccacttagtgggataaggcttggttgttgtt 16858  T

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Target: scaffold0018 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 274
Target Start/End: Original strand, 31694 - 31748
Alignment:
Q  220 gtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||| |||||||||| || | |||||| |||||||||||||||||||||||    
T  31694 gtcatttgatccatgtagccgaccccacttagtgggataaggcttggttgttgtt 31748  T

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Target: scaffold0692 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 274
Target Start/End: Original strand, 4852 - 4916
Alignment:
Q  210 acactatggcgtcatttggtccatgtagcagatcacacttaatgggataaggcttggttgttgtt 274  Q
    |||||||||||| ||||| ||| |||||| || | |||||  |||||||| ||||||||||||||    
T  4852 acactatggcgtaatttgatccgtgtagccgaccccactttgtgggataacgcttggttgttgtt 4916  T

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