View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1391A-Insertion-17 (Length: 191)
Name: NF1391A-Insertion-17
Description: NF1391A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1391A-Insertion-17 |
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Alignment Details
Target: chr1 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 8 - 190
Target Start/End: Complemental strand, 46372094 - 46371912
Alignment:
| Q |
8 |
gacacaagcattaccannnnnnngctaaactgaaattgaactttttacccatatttcaggaaagaaaatccaaaaatagtttattttagtgaaataatca |
107 |
Q |
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| T |
46372094 |
gacacaagcattaccatttttttgctaaactgaaattgaactttttacccatatttcaggaaagaaaatccaaaaatagtttattttagtgaaataatca |
46371995 |
T |
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| Q |
108 |
acaaacagtgaattttcacatcaacttaaagtaaatgaatccctttgcaagtttgcagctcaaaacattaagctgtggaacac |
190 |
Q |
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| T |
46371994 |
acaaacagtgaattttcacatcaacttaaagtaaatgaatccctttgcaagtttgcagctcaaaacattaagctgtggaacac |
46371912 |
T |
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