View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1391R-Insertion-11 (Length: 272)
Name: NF1391R-Insertion-11
Description: NF1391R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1391R-Insertion-11 |
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Alignment Details
Target: chr6 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 9 - 248
Target Start/End: Original strand, 18253835 - 18254074
Alignment:
| Q |
9 |
ttaactatcttcttttactcaatcaaataatttaattaacattttaatttcattatatgctaaagtaatttatataatcaggcggggaaaggtggagagt |
108 |
Q |
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| T |
18253835 |
ttaactatcttcttttactcaatcaaataatttaattaacattttaatttcattatatgctaaagtaatttatataatcaggcagggaaaggtggagagt |
18253934 |
T |
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| Q |
109 |
taacactccatgaaacaacaataattgctggagctttggacttaactatgaaaactgctaaagatgctatgacacctctaagtgaaacattttcacttga |
208 |
Q |
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| T |
18253935 |
taacactccatgaaacaacaataattgctggagctttggacttaactatgaaaactgctaaagatgctatgacacctttaagtgaaacattttcacttga |
18254034 |
T |
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| Q |
209 |
cataaactccaaacttgacatgtatgttcctaatgtctat |
248 |
Q |
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| T |
18254035 |
cattaactccaaacttgacatgtatgtccctaatatctat |
18254074 |
T |
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