View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1391_high_4 (Length: 292)
Name: NF1391_high_4
Description: NF1391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1391_high_4 |
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Alignment Details
Target: chr2 (Bit Score: 176; Significance: 7e-95; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 56 - 231
Target Start/End: Complemental strand, 1340021 - 1339846
Alignment:
| Q |
56 |
aggcttgtcgaagaacaaattgacaaaaagattgttttgtcaatgagagctatttatcagtcaaaaataggtcttggtctaatggacataggtatgtggg |
155 |
Q |
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| T |
1340021 |
aggcttgtcgaagaacaaattgacaaaaagattgttttgtcaatgagagctatttatcagtcaaaaataggtcttggtctaatggacataggtatgtggg |
1339922 |
T |
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| Q |
156 |
ttgtttatttctttctttcttttaatagttgaaagaaattgtaggctaaatgtatatttgacaggattgatgatgt |
231 |
Q |
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| T |
1339921 |
ttgtttatttctttctttcttttaatagttgaaagaaattgtaggctaaatgtatatttgacaggattgatgatgt |
1339846 |
T |
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