View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1391_low_9 (Length: 251)
Name: NF1391_low_9
Description: NF1391
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1391_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 34833858 - 34834098
Alignment:
| Q |
1 |
aagatgttataaatgcttttaagttcgattnnnnnnngctttaattttcacgacacatttgggtaaataaaaataaaattaactatgtannnnnnncttt |
100 |
Q |
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| T |
34833858 |
aagatgttataaatgcttttaagttcgattaaaaaa-gctttaattttcacgacacatttgggaaaataaaaataaaattaactatgtatttttttcttt |
34833956 |
T |
|
| Q |
101 |
tgaggnnnnnnnntccactattcctatgaaaggacatttacctaagaccgaccttgctcgtgtaagaaattcagaagaattctcaaaacggtttgagatg |
200 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
34833957 |
tgaggaaaaaaaatccactattcctatgaaaggacatttacctaagaccgaccatgcccgtgtaagaaattcagaagaattctcaaaacggtttgagatc |
34834056 |
T |
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| Q |
201 |
atggtatgcttcatatgaggagggaaaaacgtacccctatga |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
34834057 |
atggtatgcttcatatgaggagggaaaaacgtacccctatga |
34834098 |
T |
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