View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13920_high_2 (Length: 669)

Name: NF13920_high_2
Description: NF13920
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13920_high_2
NF13920_high_2
[»] chr7 (94 HSPs)
chr7 (217-428)||(14681900-14682112)
chr7 (211-428)||(30475013-30475231)
chr7 (217-428)||(16955934-16956145)
chr7 (217-428)||(17278402-17278614)
chr7 (217-428)||(30474279-30474491)
chr7 (217-428)||(14682836-14683049)
chr7 (212-428)||(30765666-30765883)
chr7 (352-428)||(17238481-17238557)
chr7 (353-428)||(17236203-17236278)
chr7 (236-428)||(18297176-18297369)
chr7 (213-267)||(472880-472934)
chr7 (354-428)||(25444922-25444996)
chr7 (236-334)||(42753935-42754034)
chr7 (212-273)||(18458774-18458835)
chr7 (210-271)||(43704941-43705002)
chr7 (212-273)||(48095361-48095422)
chr7 (217-273)||(20494227-20494283)
chr7 (353-428)||(8684858-8684933)
chr7 (211-334)||(25442997-25443118)
chr7 (211-273)||(3217753-3217815)
chr7 (211-273)||(7776956-7777018)
chr7 (215-273)||(8090822-8090880)
chr7 (211-273)||(13965037-13965099)
chr7 (211-273)||(47987324-47987386)
chr7 (212-273)||(24733627-24733688)
chr7 (212-273)||(27284240-27284301)
chr7 (208-273)||(34621784-34621849)
chr7 (212-273)||(39143510-39143571)
chr7 (508-576)||(8685012-8685080)
chr7 (211-331)||(17236061-17236182)
chr7 (508-576)||(17236344-17236412)
chr7 (217-273)||(20493748-20493804)
chr7 (217-273)||(22570121-22570177)
chr7 (217-273)||(23911081-23911137)
chr7 (217-273)||(27284608-27284664)
chr7 (217-273)||(31852081-31852137)
chr7 (217-273)||(37374456-37374512)
chr7 (217-273)||(40852159-40852215)
chr7 (217-273)||(45456737-45456793)
chr7 (214-273)||(44332999-44333058)
chr7 (207-273)||(8685892-8685958)
chr7 (211-273)||(21433047-21433109)
chr7 (227-273)||(28460984-28461030)
chr7 (211-273)||(32072295-32072357)
chr7 (207-273)||(36720992-36721058)
chr7 (211-273)||(40851767-40851829)
chr7 (217-271)||(42287314-42287368)
chr7 (227-273)||(42287811-42287857)
chr7 (354-428)||(42754057-42754130)
chr7 (217-271)||(45457105-45457159)
chr7 (227-273)||(45995280-45995326)
chr7 (229-266)||(18298138-18298175)
chr7 (217-266)||(26041821-26041870)
chr7 (212-273)||(36951054-36951115)
chr7 (212-273)||(36951575-36951636)
chr7 (212-273)||(37373964-37374025)
chr7 (217-273)||(713061-713117)
chr7 (217-273)||(5905703-5905759)
chr7 (217-265)||(16962847-16962895)
chr7 (217-273)||(23140251-23140307)
chr7 (217-269)||(24745379-24745431)
chr7 (217-273)||(29414491-29414547)
chr7 (217-273)||(36720482-36720538)
chr7 (217-273)||(39143149-39143205)
chr7 (227-271)||(40740050-40740094)
chr7 (217-273)||(41691928-41691984)
chr7 (353-420)||(25443136-25443203)
chr7 (206-273)||(27383565-27383632)
chr7 (218-273)||(43705390-43705445)
chr7 (227-273)||(5905141-5905187)
chr7 (227-273)||(7776470-7776516)
chr7 (217-271)||(17489520-17489574)
chr7 (217-271)||(17563640-17563694)
chr7 (227-273)||(18458289-18458335)
chr7 (217-271)||(29168834-29168888)
chr7 (217-271)||(29771571-29771625)
chr7 (217-271)||(42754539-42754593)
chr7 (227-273)||(44332522-44332568)
chr7 (227-273)||(44496077-44496123)
chr7 (227-273)||(48094853-48094899)
chr7 (226-271)||(21522232-21522277)
chr7 (236-273)||(23440918-23440955)
chr7 (206-267)||(26041499-26041560)
chr7 (236-273)||(29414137-29414174)
chr7 (212-273)||(29933709-29933769)
chr7 (216-273)||(32072692-32072749)
chr7 (226-271)||(47305139-47305184)
chr7 (217-273)||(712532-712588)
chr7 (217-273)||(5870282-5870338)
chr7 (217-273)||(14708222-14708278)
chr7 (217-273)||(23440464-23440520)
chr7 (217-265)||(30283921-30283969)
chr7 (217-273)||(35918738-35918794)
chr7 (215-271)||(41911277-41911332)
[»] chr5 (77 HSPs)
chr5 (211-425)||(38385647-38385862)
chr5 (202-428)||(38384856-38385083)
chr5 (212-428)||(24042522-24042739)
chr5 (200-428)||(37192315-37192544)
chr5 (205-428)||(37191584-37191809)
chr5 (210-428)||(24041734-24041953)
chr5 (227-428)||(28905300-28905502)
chr5 (227-428)||(28941695-28941897)
chr5 (217-334)||(30645664-30645782)
chr5 (217-428)||(13823703-13823915)
chr5 (212-428)||(39548443-39548660)
chr5 (211-428)||(19797661-19797879)
chr5 (217-428)||(6794622-6794834)
chr5 (217-428)||(42766820-42767032)
chr5 (353-428)||(13824488-13824563)
chr5 (212-330)||(19798661-19798780)
chr5 (217-334)||(42767630-42767748)
chr5 (217-428)||(14347404-14347614)
chr5 (353-428)||(23082678-23082753)
chr5 (220-334)||(13824583-13824698)
chr5 (219-273)||(16920485-16920539)
chr5 (217-273)||(17339798-17339854)
chr5 (217-273)||(39547780-39547836)
chr5 (214-273)||(3722084-3722143)
chr5 (353-428)||(30645569-30645644)
chr5 (211-273)||(435551-435613)
chr5 (211-273)||(5187120-5187182)
chr5 (212-273)||(4959559-4959620)
chr5 (212-273)||(16670027-16670088)
chr5 (212-273)||(27121620-27121681)
chr5 (205-273)||(435874-435942)
chr5 (217-273)||(1031303-1031359)
chr5 (217-273)||(24100699-24100755)
chr5 (217-273)||(25586301-25586357)
chr5 (217-273)||(27098543-27098599)
chr5 (217-273)||(27851042-27851098)
chr5 (217-273)||(29962180-29962236)
chr5 (217-273)||(30012562-30012618)
chr5 (217-273)||(30644917-30644973)
chr5 (217-273)||(38312328-38312384)
chr5 (214-273)||(14348938-14348997)
chr5 (226-273)||(17340194-17340241)
chr5 (212-271)||(35463560-35463619)
chr5 (369-428)||(42767545-42767604)
chr5 (211-273)||(4077414-4077476)
chr5 (225-271)||(5152944-5152990)
chr5 (207-273)||(6157496-6157562)
chr5 (211-273)||(11079629-11079691)
chr5 (212-273)||(14233093-14233154)
chr5 (217-270)||(16920008-16920061)
chr5 (212-273)||(26888583-26888644)
chr5 (212-269)||(27098942-27098999)
chr5 (212-273)||(29961808-29961869)
chr5 (217-273)||(1030824-1030880)
chr5 (217-273)||(13668508-13668564)
chr5 (227-271)||(14662376-14662420)
chr5 (217-273)||(16669509-16669565)
chr5 (217-273)||(26888934-26888990)
chr5 (217-273)||(27850685-27850741)
chr5 (217-273)||(28904633-28904689)
chr5 (217-273)||(28941028-28941084)
chr5 (236-271)||(30112171-30112206)
chr5 (212-267)||(35463877-35463932)
chr5 (227-270)||(39010658-39010701)
chr5 (227-273)||(1095508-1095554)
chr5 (213-267)||(1983563-1983617)
chr5 (227-273)||(7265613-7265659)
chr5 (217-271)||(25333189-25333243)
chr5 (227-273)||(30112709-30112755)
chr5 (212-273)||(11079126-11079187)
chr5 (206-273)||(4822095-4822159)
chr5 (217-273)||(6157139-6157195)
chr5 (217-273)||(20243851-20243907)
chr5 (227-271)||(28904825-28904869)
chr5 (227-271)||(28941220-28941264)
chr5 (217-273)||(39023956-39024012)
chr5 (227-271)||(39547971-39548015)
[»] chr3 (77 HSPs)
chr3 (206-428)||(42541043-42541266)
chr3 (212-428)||(32305113-32305330)
chr3 (219-428)||(34817336-34817546)
chr3 (353-425)||(33389314-33389386)
chr3 (510-659)||(33389469-33389625)
chr3 (212-330)||(54831853-54831972)
chr3 (212-330)||(17514650-17514769)
chr3 (352-428)||(52255373-52255449)
chr3 (353-428)||(54834071-54834146)
chr3 (353-427)||(53228055-53228129)
chr3 (200-273)||(51676135-51676208)
chr3 (213-273)||(31049077-31049137)
chr3 (206-273)||(45940679-45940746)
chr3 (205-271)||(24242439-24242505)
chr3 (211-273)||(24242996-24243058)
chr3 (211-273)||(48085238-48085300)
chr3 (227-273)||(52255530-52255576)
chr3 (217-271)||(52857286-52857340)
chr3 (227-273)||(53228213-53228259)
chr3 (212-273)||(12739962-12740023)
chr3 (353-426)||(17514555-17514628)
chr3 (217-326)||(52254306-52254416)
chr3 (217-273)||(12739881-12739937)
chr3 (217-273)||(29587321-29587377)
chr3 (227-271)||(39198430-39198474)
chr3 (217-273)||(40503242-40503298)
chr3 (217-273)||(44475652-44475708)
chr3 (217-273)||(44712064-44712120)
chr3 (217-273)||(45940218-45940274)
chr3 (212-267)||(13301961-13302016)
chr3 (212-267)||(13312617-13312672)
chr3 (208-272)||(46922064-46922130)
chr3 (210-273)||(53246092-53246155)
chr3 (217-271)||(4953127-4953181)
chr3 (211-273)||(13355726-13355788)
chr3 (227-273)||(27990271-27990317)
chr3 (211-273)||(29191801-29191863)
chr3 (227-273)||(40503731-40503777)
chr3 (217-267)||(43464815-43464865)
chr3 (212-273)||(966978-967039)
chr3 (216-273)||(36174510-36174567)
chr3 (204-273)||(36174986-36175055)
chr3 (212-273)||(48946175-48946236)
chr3 (217-273)||(6098980-6099036)
chr3 (217-273)||(11218844-11218900)
chr3 (213-273)||(32309133-32309193)
chr3 (217-273)||(38731944-38731999)
chr3 (217-273)||(41263542-41263598)
chr3 (217-273)||(48946685-48946741)
chr3 (217-273)||(50531107-50531163)
chr3 (508-576)||(52254559-52254627)
chr3 (217-273)||(53246600-53246656)
chr3 (228-267)||(4953438-4953477)
chr3 (226-273)||(8327766-8327813)
chr3 (393-428)||(52254460-52254495)
chr3 (227-273)||(875980-876026)
chr3 (227-273)||(8100585-8100631)
chr3 (205-271)||(13355166-13355232)
chr3 (217-271)||(28919092-28919146)
chr3 (201-271)||(40410699-40410769)
chr3 (227-273)||(50530630-50530676)
chr3 (212-273)||(6098626-6098687)
chr3 (217-262)||(6276061-6276106)
chr3 (212-273)||(8101042-8101103)
chr3 (236-273)||(12740353-12740390)
chr3 (217-262)||(24244783-24244828)
chr3 (214-267)||(26247184-26247237)
chr3 (228-273)||(32309604-32309649)
chr3 (226-271)||(34521278-34521323)
chr3 (220-273)||(44475314-44475366)
chr3 (226-271)||(54108449-54108494)
chr3 (211-271)||(14353043-14353103)
chr3 (227-267)||(26246881-26246921)
chr3 (211-271)||(41208398-41208458)
chr3 (217-273)||(41263029-41263085)
chr3 (217-273)||(47872519-47872575)
chr3 (217-273)||(52706641-52706697)
[»] chr1 (102 HSPs)
chr1 (217-428)||(31697118-31697330)
chr1 (508-659)||(52750446-52750607)
chr1 (212-422)||(29021580-29021791)
chr1 (217-428)||(51241727-51241939)
chr1 (217-436)||(52750165-52750375)
chr1 (227-428)||(16659747-16659949)
chr1 (217-428)||(50123694-50123910)
chr1 (217-428)||(49652401-49652613)
chr1 (217-330)||(24326585-24326699)
chr1 (217-330)||(24332255-24332369)
chr1 (353-428)||(24508349-24508424)
chr1 (353-428)||(36142250-36142325)
chr1 (229-428)||(38658719-38658919)
chr1 (212-273)||(49548120-49548181)
chr1 (217-273)||(1524008-1524064)
chr1 (352-428)||(47112233-47112309)
chr1 (202-273)||(31488013-31488084)
chr1 (353-428)||(51242820-51242895)
chr1 (361-428)||(52751405-52751472)
chr1 (212-330)||(29022490-29022609)
chr1 (354-428)||(50124444-50124518)
chr1 (212-273)||(5805977-5806038)
chr1 (212-273)||(7964111-7964172)
chr1 (212-273)||(24381160-24381221)
chr1 (210-271)||(33784298-33784359)
chr1 (217-273)||(5804696-5804752)
chr1 (217-273)||(7334446-7334502)
chr1 (508-589)||(49652675-49652758)
chr1 (211-271)||(51242978-51243038)
chr1 (213-273)||(52179370-52179430)
chr1 (210-273)||(3798709-3798772)
chr1 (206-273)||(44114517-44114584)
chr1 (211-273)||(37483542-37483604)
chr1 (211-273)||(38980053-38980115)
chr1 (207-273)||(45678365-45678431)
chr1 (207-273)||(50227913-50227979)
chr1 (229-330)||(967906-968008)
chr1 (354-427)||(969010-969083)
chr1 (212-273)||(34023573-34023634)
chr1 (212-273)||(37708190-37708251)
chr1 (217-273)||(3798327-3798383)
chr1 (217-273)||(5598521-5598577)
chr1 (217-273)||(7965509-7965565)
chr1 (217-273)||(14244559-14244615)
chr1 (217-273)||(24231484-24231540)
chr1 (217-273)||(24370118-24370174)
chr1 (508-576)||(24508490-24508558)
chr1 (217-273)||(28050014-28050070)
chr1 (214-334)||(31698222-31698342)
chr1 (217-273)||(37483057-37483113)
chr1 (217-273)||(45678715-45678771)
chr1 (217-273)||(46448220-46448276)
chr1 (217-273)||(50138498-50138554)
chr1 (212-271)||(6714704-6714763)
chr1 (218-273)||(33171839-33171894)
chr1 (227-273)||(1040138-1040184)
chr1 (227-273)||(1047044-1047090)
chr1 (227-273)||(6328329-6328375)
chr1 (211-273)||(7334927-7334989)
chr1 (211-273)||(9478253-9478315)
chr1 (227-273)||(33784620-33784666)
chr1 (217-271)||(35368859-35368913)
chr1 (217-271)||(35814397-35814451)
chr1 (211-273)||(37708578-37708640)
chr1 (359-428)||(29022403-29022472)
chr1 (217-273)||(6137236-6137292)
chr1 (217-273)||(6714205-6714261)
chr1 (217-273)||(7121819-7121875)
chr1 (217-273)||(9478616-9478672)
chr1 (217-273)||(15073418-15073474)
chr1 (217-273)||(15073926-15073982)
chr1 (217-273)||(16659080-16659136)
chr1 (217-273)||(31488411-31488467)
chr1 (217-273)||(32193994-32194050)
chr1 (217-273)||(38979674-38979730)
chr1 (217-273)||(39851177-39851233)
chr1 (217-273)||(46448740-46448796)
chr1 (217-273)||(50138869-50138925)
chr1 (217-273)||(50227518-50227574)
chr1 (227-267)||(50682592-50682632)
chr1 (217-264)||(10719641-10719688)
chr1 (358-428)||(968036-968106)
chr1 (231-273)||(6327958-6328000)
chr1 (217-267)||(10719359-10719409)
chr1 (353-399)||(31698157-31698203)
chr1 (227-273)||(38657689-38657735)
chr1 (217-271)||(39851542-39851596)
chr1 (226-271)||(4550929-4550974)
chr1 (236-273)||(8678154-8678191)
chr1 (226-271)||(10923374-10923419)
chr1 (226-271)||(10923692-10923737)
chr1 (212-273)||(14244164-14244225)
chr1 (226-271)||(18793703-18793748)
chr1 (212-273)||(48984304-48984365)
chr1 (227-271)||(16659272-16659316)
chr1 (217-269)||(20257971-20258023)
chr1 (217-273)||(24508213-24508269)
chr1 (226-270)||(40703195-40703239)
chr1 (217-273)||(42616698-42616754)
chr1 (237-273)||(45679256-45679292)
chr1 (217-273)||(48497792-48497848)
chr1 (217-273)||(48498199-48498255)
[»] chr8 (70 HSPs)
chr8 (204-428)||(44553118-44553343)
chr8 (227-334)||(22594331-22594439)
chr8 (217-428)||(13462109-13462320)
chr8 (211-428)||(13364046-13364264)
chr8 (206-273)||(7116464-7116531)
chr8 (211-273)||(26060631-26060693)
chr8 (212-273)||(2221965-2222026)
chr8 (213-273)||(30864162-30864222)
chr8 (217-273)||(31988517-31988573)
chr8 (217-273)||(37035393-37035449)
chr8 (217-273)||(40229093-40229149)
chr8 (214-269)||(16905255-16905310)
chr8 (353-428)||(16906307-16906382)
chr8 (206-273)||(31445661-31445728)
chr8 (212-271)||(43633121-43633180)
chr8 (207-273)||(3292010-3292076)
chr8 (211-273)||(3444119-3444181)
chr8 (211-273)||(11713197-11713259)
chr8 (215-273)||(13089439-13089497)
chr8 (204-273)||(26060096-26060165)
chr8 (217-273)||(761396-761452)
chr8 (217-273)||(2221597-2221653)
chr8 (217-273)||(7117115-7117171)
chr8 (217-273)||(9739784-9739840)
chr8 (217-273)||(22013465-22013521)
chr8 (217-273)||(25825301-25825357)
chr8 (217-273)||(27786484-27786540)
chr8 (217-273)||(41154620-41154676)
chr8 (217-273)||(41155013-41155069)
chr8 (217-273)||(42193782-42193838)
chr8 (217-273)||(45123223-45123279)
chr8 (206-273)||(9115593-9115660)
chr8 (353-428)||(22594461-22594536)
chr8 (229-331)||(9319282-9319384)
chr8 (211-273)||(9807279-9807341)
chr8 (227-273)||(15271136-15271182)
chr8 (207-273)||(33098969-33099035)
chr8 (212-273)||(762170-762231)
chr8 (228-273)||(3443045-3443090)
chr8 (229-334)||(16906401-16906507)
chr8 (217-273)||(7791650-7791706)
chr8 (217-273)||(7812234-7812290)
chr8 (217-273)||(9739279-9739335)
chr8 (217-273)||(11713569-11713625)
chr8 (217-273)||(11760914-11760970)
chr8 (217-273)||(14897395-14897451)
chr8 (205-273)||(18476071-18476139)
chr8 (217-273)||(22013951-22014007)
chr8 (217-273)||(22323940-22323996)
chr8 (217-273)||(23017187-23017243)
chr8 (217-273)||(27785969-27786025)
chr8 (217-273)||(40449252-40449308)
chr8 (217-273)||(43633588-43633644)
chr8 (217-273)||(45466292-45466348)
chr8 (212-271)||(8000793-8000852)
chr8 (217-272)||(9317028-9317083)
chr8 (212-267)||(10134606-10134661)
chr8 (226-273)||(45434266-45434313)
chr8 (227-273)||(11174167-11174213)
chr8 (227-273)||(40448736-40448782)
chr8 (227-273)||(43086884-43086930)
chr8 (227-273)||(43273835-43273881)
chr8 (226-271)||(7041953-7041998)
chr8 (236-273)||(11760462-11760499)
chr8 (226-271)||(40032438-40032483)
chr8 (396-428)||(9319179-9319211)
chr8 (217-273)||(31988899-31988955)
chr8 (217-273)||(33098590-33098646)
chr8 (217-273)||(40229637-40229693)
chr8 (217-273)||(43086391-43086447)
[»] chr4 (98 HSPs)
chr4 (212-428)||(11108291-11108507)
chr4 (227-428)||(50282775-50282975)
chr4 (217-428)||(11815863-11816076)
chr4 (217-428)||(45044371-45044583)
chr4 (212-334)||(45046845-45046968)
chr4 (354-428)||(50281821-50281895)
chr4 (211-428)||(2734794-2735012)
chr4 (353-428)||(9091565-9091640)
chr4 (353-428)||(13631644-13631719)
chr4 (211-428)||(44182559-44182777)
chr4 (212-428)||(26281094-26281310)
chr4 (353-428)||(26280213-26280288)
chr4 (353-424)||(31081550-31081621)
chr4 (360-425)||(45045134-45045199)
chr4 (217-428)||(43630164-43630377)
chr4 (217-428)||(11816597-11816809)
chr4 (353-428)||(24296999-24297074)
chr4 (353-428)||(40680605-40680680)
chr4 (227-334)||(53596086-53596194)
chr4 (212-273)||(34237479-34237540)
chr4 (208-273)||(48453627-48453692)
chr4 (211-331)||(43629176-43629297)
chr4 (213-273)||(46058694-46058754)
chr4 (206-273)||(17475882-17475949)
chr4 (209-271)||(51399526-51399589)
chr4 (370-428)||(9087180-9087238)
chr4 (211-273)||(42369508-42369570)
chr4 (216-274)||(46579779-46579837)
chr4 (212-273)||(2735600-2735661)
chr4 (212-273)||(14947183-14947244)
chr4 (212-273)||(20614615-20614676)
chr4 (221-330)||(40680473-40680582)
chr4 (212-273)||(56271215-56271276)
chr4 (217-273)||(1098056-1098112)
chr4 (217-273)||(9091427-9091483)
chr4 (217-273)||(17475400-17475456)
chr4 (217-273)||(25618439-25618495)
chr4 (209-273)||(28504572-28504636)
chr4 (217-273)||(31262223-31262279)
chr4 (217-273)||(31487981-31488037)
chr4 (217-273)||(41610130-41610186)
chr4 (227-399)||(44183678-44183851)
chr4 (217-273)||(44304361-44304417)
chr4 (217-273)||(53594987-53595043)
chr4 (214-273)||(24045846-24045905)
chr4 (206-273)||(41845493-41845560)
chr4 (217-267)||(14251510-14251560)
chr4 (211-273)||(24045362-24045424)
chr4 (227-273)||(25619091-25619137)
chr4 (227-273)||(34543052-34543098)
chr4 (211-273)||(39321052-39321114)
chr4 (211-273)||(41845871-41845933)
chr4 (227-273)||(44303528-44303574)
chr4 (227-273)||(48091974-48092020)
chr4 (217-270)||(5904508-5904561)
chr4 (217-274)||(5904886-5904943)
chr4 (217-266)||(14251199-14251248)
chr4 (212-273)||(17258864-17258925)
chr4 (213-273)||(24297156-24297214)
chr4 (214-267)||(44303982-44304035)
chr4 (217-273)||(1098395-1098451)
chr4 (217-273)||(3503968-3504024)
chr4 (392-428)||(13630270-13630306)
chr4 (217-273)||(14525936-14525992)
chr4 (217-273)||(17259471-17259527)
chr4 (217-273)||(22679636-22679692)
chr4 (217-273)||(26673122-26673178)
chr4 (217-273)||(28505072-28505128)
chr4 (217-273)||(34237946-34238002)
chr4 (217-273)||(42018886-42018942)
chr4 (217-273)||(43291960-43292016)
chr4 (217-273)||(46307559-46307615)
chr4 (217-273)||(52574678-52574734)
chr4 (206-273)||(22680101-22680168)
chr4 (218-269)||(22813423-22813474)
chr4 (226-273)||(43969566-43969613)
chr4 (227-273)||(14947686-14947732)
chr4 (227-273)||(20614128-20614174)
chr4 (227-273)||(37208328-37208374)
chr4 (227-273)||(40256111-40256157)
chr4 (227-273)||(41610532-41610578)
chr4 (227-273)||(46308036-46308082)
chr4 (358-428)||(51107869-51107939)
chr4 (229-267)||(51399231-51399269)
chr4 (217-271)||(53595167-53595221)
chr4 (227-273)||(56270557-56270603)
chr4 (217-330)||(9087301-9087414)
chr4 (217-334)||(13631736-13631854)
chr4 (212-273)||(22813356-22813417)
chr4 (511-564)||(44182845-44182898)
chr4 (217-270)||(44795755-44795808)
chr4 (212-273)||(48454004-48454065)
chr4 (217-273)||(1369872-1369927)
chr4 (227-271)||(2735422-2735466)
chr4 (217-273)||(3503473-3503529)
chr4 (237-273)||(42369150-42369186)
chr4 (209-273)||(46849580-46849644)
chr4 (396-428)||(53596015-53596047)
[»] chr2 (79 HSPs)
chr2 (213-428)||(8885657-8885873)
chr2 (217-428)||(12602440-12602652)
chr2 (508-659)||(3093432-3093591)
chr2 (217-428)||(28189450-28189662)
chr2 (214-330)||(16329745-16329862)
chr2 (217-428)||(8029852-8030064)
chr2 (351-428)||(29519889-29519966)
chr2 (217-428)||(8892904-8893116)
chr2 (217-425)||(16330684-16330894)
chr2 (211-428)||(40468940-40469158)
chr2 (353-428)||(12601377-12601452)
chr2 (353-428)||(19298412-19298487)
chr2 (234-427)||(18950756-18950950)
chr2 (217-273)||(3093188-3093244)
chr2 (141-210)||(38573243-38573312)
chr2 (353-428)||(20685768-20685843)
chr2 (209-273)||(9401115-9401179)
chr2 (217-273)||(10708152-10708208)
chr2 (217-273)||(33200524-33200580)
chr2 (218-273)||(2822680-2822735)
chr2 (210-273)||(4602816-4602879)
chr2 (353-428)||(10708266-10708341)
chr2 (211-273)||(2822301-2822363)
chr2 (207-273)||(15136875-15136940)
chr2 (212-273)||(12601237-12601298)
chr2 (212-273)||(17978098-17978159)
chr2 (220-273)||(19299830-19299883)
chr2 (212-273)||(32194828-32194889)
chr2 (217-273)||(2970338-2970394)
chr2 (217-273)||(2970816-2970872)
chr2 (217-273)||(5381539-5381595)
chr2 (217-273)||(11129885-11129941)
chr2 (218-334)||(11131121-11131238)
chr2 (217-273)||(12966229-12966285)
chr2 (217-273)||(16712846-16712902)
chr2 (211-271)||(26424825-26424885)
chr2 (353-417)||(29519298-29519362)
chr2 (217-273)||(32194445-32194501)
chr2 (354-427)||(10709211-10709281)
chr2 (217-271)||(25334610-25334664)
chr2 (217-267)||(38978929-38978979)
chr2 (212-273)||(18470069-18470130)
chr2 (228-273)||(35668922-35668967)
chr2 (217-273)||(4844051-4844107)
chr2 (217-273)||(5484940-5484996)
chr2 (217-273)||(13479431-13479487)
chr2 (213-273)||(15136350-15136410)
chr2 (217-273)||(16712440-16712496)
chr2 (205-273)||(21533026-21533094)
chr2 (227-271)||(25882005-25882049)
chr2 (217-273)||(31557094-31557150)
chr2 (217-273)||(33200031-33200087)
chr2 (217-273)||(34618521-34618577)
chr2 (213-273)||(38536617-38536677)
chr2 (217-273)||(38807184-38807240)
chr2 (229-273)||(39109502-39109546)
chr2 (217-273)||(43820327-43820383)
chr2 (226-273)||(5382017-5382064)
chr2 (226-273)||(31557553-31557600)
chr2 (212-271)||(43183912-43183971)
chr2 (227-273)||(11713996-11714042)
chr2 (211-273)||(14287829-14287890)
chr2 (227-273)||(15044752-15044798)
chr2 (217-267)||(16581599-16581649)
chr2 (217-271)||(20685632-20685686)
chr2 (227-273)||(25478836-25478882)
chr2 (293-334)||(29519983-29520025)
chr2 (217-262)||(16203447-16203492)
chr2 (217-266)||(16581341-16581390)
chr2 (217-273)||(677387-677443)
chr2 (217-273)||(8444955-8445011)
chr2 (227-267)||(10373329-10373369)
chr2 (217-273)||(14847769-14847825)
chr2 (217-273)||(18064428-18064484)
chr2 (217-273)||(18469596-18469652)
chr2 (227-267)||(25945839-25945879)
chr2 (217-273)||(38806846-38806902)
chr2 (217-273)||(39107760-39107816)
chr2 (211-271)||(44915737-44915797)
[»] chr6 (40 HSPs)
chr6 (212-428)||(8850215-8850433)
chr6 (212-428)||(12261333-12261550)
chr6 (217-428)||(27128847-27129059)
chr6 (211-428)||(28865596-28865813)
chr6 (353-428)||(902596-902671)
chr6 (217-326)||(901421-901530)
chr6 (211-420)||(10998721-10998931)
chr6 (353-428)||(901559-901634)
chr6 (353-428)||(12587712-12587787)
chr6 (212-273)||(3366496-3366557)
chr6 (212-273)||(14527516-14527577)
chr6 (209-273)||(26392844-26392908)
chr6 (217-273)||(28866419-28866475)
chr6 (353-428)||(16146217-16146292)
chr6 (228-334)||(902691-902797)
chr6 (211-273)||(13839867-13839929)
chr6 (508-576)||(901702-901770)
chr6 (217-273)||(3366997-3367053)
chr6 (217-273)||(3618784-3618840)
chr6 (217-273)||(14673682-14673738)
chr6 (217-273)||(17383738-17383794)
chr6 (217-273)||(21271489-21271545)
chr6 (217-273)||(21272118-21272174)
chr6 (217-273)||(22498766-22498822)
chr6 (217-273)||(31739914-31739970)
chr6 (214-273)||(10914560-10914619)
chr6 (217-271)||(17383934-17383988)
chr6 (211-273)||(29175522-29175584)
chr6 (217-273)||(9424907-9424963)
chr6 (217-273)||(13703384-13703440)
chr6 (217-273)||(13839478-13839534)
chr6 (206-273)||(22498376-22498443)
chr6 (217-267)||(959322-959372)
chr6 (227-273)||(1948636-1948682)
chr6 (217-271)||(12586853-12586907)
chr6 (212-273)||(12587852-12587913)
chr6 (236-273)||(18683572-18683609)
chr6 (236-273)||(18683935-18683972)
chr6 (217-273)||(715048-715103)
chr6 (217-273)||(29175067-29175123)
[»] scaffold0192 (2 HSPs)
scaffold0192 (217-330)||(14646-14758)
scaffold0192 (353-428)||(14544-14619)
[»] scaffold0202 (2 HSPs)
scaffold0202 (353-428)||(22049-22124)
scaffold0202 (282-334)||(22142-22195)
[»] scaffold0150 (1 HSPs)
scaffold0150 (236-429)||(38904-39098)
[»] scaffold0014 (2 HSPs)
scaffold0014 (217-273)||(230875-230931)
scaffold0014 (217-273)||(231257-231313)
[»] scaffold0259 (2 HSPs)
scaffold0259 (357-428)||(12179-12250)
scaffold0259 (236-306)||(12064-12134)
[»] scaffold0006 (2 HSPs)
scaffold0006 (212-273)||(83011-83072)
scaffold0006 (217-273)||(83385-83441)
[»] scaffold0005 (1 HSPs)
scaffold0005 (212-273)||(1473-1534)
[»] scaffold0002 (2 HSPs)
scaffold0002 (217-273)||(283173-283229)
scaffold0002 (227-271)||(428983-429027)
[»] scaffold0009 (4 HSPs)
scaffold0009 (214-273)||(218162-218221)
scaffold0009 (212-273)||(242160-242221)
scaffold0009 (227-273)||(217597-217643)
scaffold0009 (237-273)||(241685-241721)
[»] scaffold0220 (1 HSPs)
scaffold0220 (217-267)||(25966-26016)
[»] scaffold0054 (2 HSPs)
scaffold0054 (227-273)||(57035-57081)
scaffold0054 (227-273)||(57557-57603)
[»] scaffold0003 (1 HSPs)
scaffold0003 (213-271)||(300078-300136)
[»] scaffold0482 (1 HSPs)
scaffold0482 (217-273)||(207-263)
[»] scaffold0027 (1 HSPs)
scaffold0027 (227-273)||(124950-124996)
[»] scaffold0533 (1 HSPs)
scaffold0533 (217-273)||(3841-3897)
[»] scaffold0360 (1 HSPs)
scaffold0360 (217-273)||(12076-12132)
[»] scaffold0018 (1 HSPs)
scaffold0018 (213-273)||(133576-133636)


Alignment Details
Target: chr7 (Bit Score: 80; Significance: 3e-37; HSPs: 94)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 217 - 428
Target Start/End: Original strand, 14681900 - 14682112
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacc 315  Q
    ||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||        ||||| || |||| ||||||||||| || ||||||    
T  14681900 ttaaatgcgcttttgatcccttaattatttatttggtatcgctttggtcccttaactaaaaataagattgtttaagtattttatctttatctccgttacc 14681999  T
Q  316 tattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatc 415  Q
    | |||||||||||||||||                |||||||||||||||||||||||||| ||||||||| ||  |||||||| |||||||||||||||    
T  14682000 tgttttggtcccttctgttaaaaaaattcaaaaaactgttagggtttatattattcatcttcttccttctccttctatcatcttcttcatgatcttcatc 14682099  T
Q  416 atcaacaacacac 428  Q
    |||||||||||||    
T  14682100 atcaacaacacac 14682112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 211 - 428
Target Start/End: Complemental strand, 30475231 - 30475013
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tct 309  Q
    ||||| ||||||||||||||| || |||||||||||||||||||||| |||||||||||||||        ||||| ||||||||||||||||||| |||    
T  30475231 ttaggcttaaatgcgtttttgatctcttaattatttatttggtatcgatttggtcccttaactaaaaaaaagattgtttgagtactttatctttatctct 30475132  T
Q  310 gttacctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatc 409  Q
    |||| ||||||||||||||||||||                | |||||||||||||||||||||||| ||| || || |   |||||||| ||||| |||    
T  30475131 gttatctattttggtcccttctgttaaaaaaattcaaaaaaccgttagggtttatattattcatcttcttctttatcctcccatcatcttcttcataatc 30475032  T
Q  410 ttcatcatcaacaacacac 428  Q
    |||||||||||||||||||    
T  30475031 ttcatcatcaacaacacac 30475013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 217 - 428
Target Start/End: Original strand, 16955934 - 16956145
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacc 315  Q
    ||||||||| |||||||| ||||| ||||||||||||||| ||||||||||||||||        ||||| ||||||||||||||||||| || ||||||    
T  16955934 ttaaatgcgcttttggtcccttaactatttatttggtatcactttggtcccttaact-aaaaaaagattgtttgagtactttatctttatctccgttacc 16956032  T
Q  316 tattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatc 415  Q
    | |||||||||||| ||||                | |||||||||||||||||||||||| ||||||||| ||  ||||| || |||||||||||||||    
T  16956033 tgttttggtcccttatgttaaaaaaattcaaaaaaccgttagggtttatattattcatcttcttccttctccttccatcattttcttcatgatcttcatc 16956132  T
Q  416 atcaacaacacac 428  Q
    |||||||||||||    
T  16956133 atcaacaacacac 16956145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 217 - 428
Target Start/End: Original strand, 17278402 - 17278614
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacc 315  Q
    |||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||        ||||| |||||||||||||||| || || ||||||    
T  17278402 ttaaatgcgtttttggtcccttaactatttatttggtatcactttggtcccttaactaaaaaaaagattgtttgagtactttatcttcatctccgttacc 17278501  T
Q  316 tattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatc 415  Q
    | ||||||||||||| |||                  |||||||||| ||||||||||||| ||||||||| ||  |||||||| |||||||||||||||    
T  17278502 tgttttggtcccttccgttaaaaaaattcaaaaaaacgttagggtttgtattattcatcttcttccttctctttccatcatcttcttcatgatcttcatc 17278601  T
Q  416 atcaacaacacac 428  Q
    |||||||||||||    
T  17278602 atcaacaacacac 17278614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 217 - 428
Target Start/End: Original strand, 30474279 - 30474491
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacc 315  Q
    |||||||| |||||| || ||||| ||||||| ||||||||||||||||||||||||        ||||| |||| |||||||||||||| || ||||||    
T  30474279 ttaaatgcatttttgatcccttaactatttatctggtatcgctttggtcccttaactaaaaaaaagattgtttgaatactttatctttatctccgttacc 30474378  T
Q  316 tattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatc 415  Q
    ||||||||| |||||||||                | |||||||||||||||||||||||| || |||||| ||  ||||| || |||||||||||||||    
T  30474379 tattttggttccttctgttaaaaaaattcaaaaaaccgttagggtttatattattcatcttcttgcttctccttccatcatattcttcatgatcttcatc 30474478  T
Q  416 atcaacaacacac 428  Q
    |||||||||||||    
T  30474479 atcaacaacacac 30474491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 217 - 428
Target Start/End: Complemental strand, 14683049 - 14682836
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacc 315  Q
    ||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||        ||||  ||||||| ||||||||||| || |||| |    
T  14683049 ttaaatgtgtttttggtctcttaactatttatttggtatcgctttggtcccttaactaaaaaaaagattatttgagtattttatctttatctccgttatc 14682950  T
Q  316 tattttggtcccttctgttnnnnnnnnnnnnnnnnct-gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcat 414  Q
    | |||||||||||||||||                 | ||||||||||||||| |||||||| |||||| || ||| |||||||| ||||||||||||||    
T  14682949 tgttttggtcccttctgttaaaaaaattaaaaaaaatcgttagggtttatatttttcatcttcttccttatcctttcatcatcttcttcatgatcttcat 14682850  T
Q  415 catcaacaacacac 428  Q
    ||||||||||||||    
T  14682849 catcaacaacacac 14682836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 212 - 428
Target Start/End: Original strand, 30765666 - 30765883
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctg 310  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||        ||||| |||||||||||||||| || || |    
T  30765666 taggcttaaatgcgtttttggtcccttaactatttatttggtatcactttggtcccttaactaaaaaaaagattgtttgagtactttatcttcatctccg 30765765  T
Q  311 ttacctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatct 410  Q
    |||||| ||||||||||||| |||                  |||||||||| ||||||||||||| || |||||| ||  ||| |||| ||||||||||    
T  30765766 ttacctgttttggtcccttccgttaaaaaaattcagaaaaacgttagggtttgtattattcatcttctttcttctctttccatcctcttcttcatgatct 30765865  T
Q  411 tcatcatcaacaacacac 428  Q
    ||||||||||||||||||    
T  30765866 tcatcatcaacaacacac 30765883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 352 - 428
Target Start/End: Complemental strand, 17238557 - 17238481
Alignment:
Q  352 tgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    ||||||||||||||||||||||||| ||||||||| ||  | |||||| ||||||||||||||||||||||||||||    
T  17238557 tgttagggtttatattattcatcttcttccttctccttccagcatcttcttcatgatcttcatcatcaacaacacac 17238481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 353 - 428
Target Start/End: Original strand, 17236203 - 17236278
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||||||||||||||||||||| ||||||||  ||  |||||||| ||||||||||||||||||||||||||||    
T  17236203 gttagggtttatattattcatcttcttccttctttttccatcatcttcttcatgatcttcatcatcaacaacacac 17236278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 236 - 428
Target Start/End: Original strand, 18297176 - 18297369
Alignment:
Q  236 cttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacctattttggtcccttctgtt 334  Q
    ||||| ||||||||||||||||||||| ||||||||||        ||||| ||||||| ||||||||||| || ||||||||||||||||||||| |||    
T  18297176 cttaagtatttatttggtatcgctttgatcccttaactaaaagaaagattgtttgagtattttatctttatctccgttacctattttggtcccttccgtt 18297275  T
Q  335 nnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
                      |||||||||| ||||||||||||| ||||||||| ||  ||| |||| |||||||||||||||||||| |||||||    
T  18297276 aaataaattcaaaaaaacgttagggtttgtattattcatcttcttccttctccttccatcctcttcttcatgatcttcatcatcaaaaacacac 18297369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 472934 - 472880
Alignment:
Q  213 aggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtccc 267  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||    
T  472934 aggtttaaatgcttttttggtcccttaagtatttatttggtatcgctttggtccc 472880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 354 - 428
Target Start/End: Complemental strand, 25444996 - 25444922
Alignment:
Q  354 ttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    ||||||||||||||||||||||| ||||||||| ||  ||| |||| |||||||||||| ||||||| |||||||    
T  25444996 ttagggtttatattattcatcttcttccttctccttccatcctcttcttcatgatcttcgtcatcaaaaacacac 25444922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 236 - 334
Target Start/End: Original strand, 42753935 - 42754034
Alignment:
Q  236 cttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacctattttggtcccttctgtt 334  Q
    ||||| ||||||||||||||||||||| ||| ||||||        ||||| ||||||||||||||||||| || ||||||| |||||||||||||||||    
T  42753935 cttaagtatttatttggtatcgctttgatcctttaactaaaaaaaagattgtttgagtactttatctttatctccgttacctgttttggtcccttctgtt 42754034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 18458835 - 18458774
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  18458835 taggtttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 18458774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 43704941 - 43705002
Alignment:
Q  210 attaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    |||||| |||||||| ||||||||| ||||| |||||| |||||||||||||||||||||||    
T  43704941 attaggcttaaatgcttttttggtcccttaactatttaattggtatcgctttggtcccttaa 43705002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 48095422 - 48095361
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| |||||||| ||||||||| ||||| |||||| |||||||||||||||||||||||||    
T  48095422 taggcttaaatgcttttttggtcccttaactatttaattggtatcgctttggtcccttaact 48095361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 20494283 - 20494227
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||| |||||||||| |||||||||||| ||||||||| |||||||||||||||    
T  20494283 ttaaatgtgtttttggtcccttaattatttaattggtatcgttttggtcccttaact 20494227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 353 - 428
Target Start/End: Original strand, 8684858 - 8684933
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||||||| ||||||||||||| ||||||||| ||  ||  |||| ||||||||||| ||||||||||||||||    
T  8684858 gttagggtttgtattattcatcttcttccttctccttcaattctcttcttcatgatctttatcatcaacaacacac 8684933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 211 - 334
Target Start/End: Original strand, 25442997 - 25443118
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tct 309  Q
    ||||||||||||||| |||||||| ||||  |||||||||| |||| |||| |||||||||||         |||| ||||||||||||||||||| ||     
T  25442997 ttaggtttaaatgcgcttttggtcccttaggtatttatttgatatcactttagtcccttaact---aaaaaaattgtttgagtactttatctttatctcc 25443093  T
Q  310 gttacctattttggtcccttctgtt 334  Q
    |||| || |||||||||||||||||    
T  25443094 gttatctgttttggtcccttctgtt 25443118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 3217815 - 3217753
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  3217815 ttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 3217753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 7777018 - 7776956
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  7777018 ttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 7776956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 215 - 273
Target Start/End: Original strand, 8090822 - 8090880
Alignment:
Q  215 gtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||  ||||||||| ||||| |||||| |||||||||||||||||||||||||    
T  8090822 gtttaaatgtttttttggtcccttaactatttaattggtatcgctttggtcccttaact 8090880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 13965037 - 13965099
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  13965037 ttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 13965099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 47987324 - 47987386
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  47987324 ttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 47987386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 24733627 - 24733688
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  24733627 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 24733688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 27284240 - 27284301
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  27284240 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 27284301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 208 - 273
Target Start/End: Complemental strand, 34621849 - 34621784
Alignment:
Q  208 aaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||||||  |||||||| ||||| |||||| ||||||||||||||||| |||||||    
T  34621849 aaattaggcttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtctcttaact 34621784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 39143571 - 39143510
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  39143571 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 39143510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 508 - 576
Target Start/End: Original strand, 8685012 - 8685080
Alignment:
Q  508 ccaattttcccattaaaaaacatccctttcaaacaaaacaacataatttcttaatcttcctaaaccaaa 576  Q
    |||||||| ||||| |||||||||| |||||| | |||||||| ||||||| ||||| |||||||||||    
T  8685012 ccaatttttccattcaaaaacatccatttcaatctaaacaacacaatttctcaatctccctaaaccaaa 8685080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 211 - 331
Target Start/End: Original strand, 17236061 - 17236182
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tct 309  Q
    ||||| ||||||||  ||||||||  |||| |||||||||||||||||||||| |||||||||        ||||| ||||||||||||| ||||| ||     
T  17236061 ttaggcttaaatgctcttttggtcctttaagtatttatttggtatcgctttggccccttaactaaaaaaaagattgtttgagtactttatttttatctcc 17236160  T
Q  310 gttacctattttggtcccttct 331  Q
    ||||| | ||||||||| ||||    
T  17236161 gttacatgttttggtcctttct 17236182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 508 - 576
Target Start/End: Original strand, 17236344 - 17236412
Alignment:
Q  508 ccaattttcccattaaaaaacatccctttcaaacaaaacaacataatttcttaatcttcctaaaccaaa 576  Q
    |||||||| ||||||||||||||||||||||| | |||||| | ||||||| ||||| |||| ||||||    
T  17236344 ccaatttttccattaaaaaacatccctttcaatctaaacaatacaatttctcaatctccctagaccaaa 17236412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 20493748 - 20493804
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  20493748 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 20493804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 22570177 - 22570121
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||| |||||||||| ||||| |||||| ||| |||||||||||||||||||||    
T  22570177 ttaaatgtgtttttggtcccttaactatttaattgatatcgctttggtcccttaact 22570121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 23911137 - 23911081
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||||||| ||||| |||||| | |||||||||||||||||||||||    
T  23911137 ttaaatgcttttttggtcccttaactatttaataggtatcgctttggtcccttaact 23911081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 27284664 - 27284608
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  27284664 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 27284608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 31852137 - 31852081
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  31852137 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 31852081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 37374512 - 37374456
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  37374512 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 37374456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 40852215 - 40852159
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  40852215 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 40852159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 45456737 - 45456793
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  45456737 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 45456793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 44332999 - 44333058
Alignment:
Q  214 ggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||||  ||||||||  |||| |||||| |||||||||||||||||||||||||    
T  44332999 ggtttaaatgctcttttggtcctttaagtatttaattggtatcgctttggtcccttaact 44333058  T

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Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 8685958 - 8685892
Alignment:
Q  207 aaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||||||  ||||| |  ||||| |||||||||||||||| |||||||||||||||    
T  8685958 aaaataaggtttaaatgctcttttgattccttaagtatttatttggtatcgttttggtcccttaact 8685892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 21433109 - 21433047
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  ||||||||  |||| |||||| |||||||||||||||||||||||||    
T  21433109 ttaggcttaaatgctcttttggtccattaagtatttaattggtatcgctttggtcccttaact 21433047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 28461030 - 28460984
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  28461030 ttttggtcccttaagtatttaattggtatcgctttggtcccttaact 28460984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 32072295 - 32072357
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| ||||| |||||| ||| |||||||||||||||||||||    
T  32072295 ttaggcttaaatgctcttttggtcccttaagtatttaattgatatcgctttggtcccttaact 32072357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 36721058 - 36720992
Alignment:
Q  207 aaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| |||| ||||||||  |||||||| ||||| |||||| ||| |||||||||||||||||||||    
T  36721058 aaaaataggcttaaatgctcttttggtcccttaagtatttaattgatatcgctttggtcccttaact 36720992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 40851767 - 40851829
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| ||||| |||||| |||||||||||||||| ||||||||    
T  40851767 ttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggttccttaact 40851829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 42287314 - 42287368
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||    
T  42287314 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaa 42287368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 42287857 - 42287811
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  42287857 ttttggtcccttaactatttaattggtatcgctttggtcccttaact 42287811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 428
Target Start/End: Original strand, 42754057 - 42754130
Alignment:
Q  354 ttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    ||||| ||| || ||||| |||| ||||||||| ||| ||| |||| ||||||||||||||||||||||||||||    
T  42754057 ttaggatttgtactattcctcttcttccttctc-tttcatcctcttcttcatgatcttcatcatcaacaacacac 42754130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 45457159 - 45457105
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||    
T  45457159 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaa 45457105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 45995280 - 45995326
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  45995280 ttttggtcccttaactatttaattggtatcgctttggtcccttaact 45995326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 18298175 - 18298138
Alignment:
Q  229 ttggtcacttaattatttatttggtatcgctttggtcc 266  Q
    |||||| |||||||||||||||||||||||||||||||    
T  18298175 ttggtcccttaattatttatttggtatcgctttggtcc 18298138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 266
Target Start/End: Complemental strand, 26041870 - 26041821
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcc 266  Q
    ||||||||  |||||||| ||||| |||||||||||||||||||||||||    
T  26041870 ttaaatgctcttttggtcccttaaatatttatttggtatcgctttggtcc 26041821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 36951054 - 36951115
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| ||||| |||||| |||||||||||||||| ||||||||    
T  36951054 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggttccttaact 36951115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 36951636 - 36951575
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| |||||||||||| ||| ||||| |||||||||||||||    
T  36951636 taggcttaaatgctcttttggtcccttaattatttaattgatatcgttttggtcccttaact 36951575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 37373964 - 37374025
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| ||||| |||||| ||| |||||||||||||||||||||    
T  37373964 taggcttaaatgctcttttggtcccttaactatttaattgatatcgctttggtcccttaact 37374025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 713117 - 713061
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| |||||||||||| ||||||||| ||||||| |||||||    
T  713117 ttaaatgctcttttggtcccttaattatttaattggtatcgttttggtctcttaact 713061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 5905759 - 5905703
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||| ||||||||||    
T  5905759 ttaaatgctcttttggtctcttaactatttaattggtatcgctttgatcccttaact 5905703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 16962847 - 16962895
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtc 265  Q
    ||||||||  |||||||| ||||| ||||||||||||||||||||||||    
T  16962847 ttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtc 16962895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 23140307 - 23140251
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||| ||||||||||||||||    
T  23140307 ttaaatgctcttttggtcccttaactatttaattggtatcactttggtcccttaact 23140251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 24745431 - 24745379
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtccctt 269  Q
    ||||||| |||||||||| ||||| |||||| ||| |||||||||||||||||    
T  24745431 ttaaatgtgtttttggtcccttaactatttaattgatatcgctttggtccctt 24745379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 29414547 - 29414491
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| | |||||||||||||||||||||||    
T  29414547 ttaaatgctcttttggtcccttaactatttaataggtatcgctttggtcccttaact 29414491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 36720482 - 36720538
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||| | ||||| ||| ||||| |||||| |||||||||||||||||||||||||    
T  36720482 ttaaatacttttttagtcccttaagtatttagttggtatcgctttggtcccttaact 36720538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 39143149 - 39143205
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||||||||| |||||||||||||||    
T  39143149 ttaaatgctcttttggtcccttaactatttaattggtatcgttttggtcccttaact 39143205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 40740094 - 40740050
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    |||| ||| ||||||||||||||| ||||||||||||||||||||    
T  40740094 ttttagtcccttaattatttatttagtatcgctttggtcccttaa 40740050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 41691928 - 41691984
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||  ||||||||| ||||| |||||| ||||||||| |||||||||||||||    
T  41691928 ttaaatgtatttttggtcccttaactatttaattggtatcgttttggtcccttaact 41691984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 353 - 420
Target Start/End: Original strand, 25443136 - 25443203
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaa 420  Q
    |||||||||| ||||||||||||| ||| | ||| ||  ||| |||| ||||||||||||||||||||    
T  25443136 gttagggtttgtattattcatcttcttcttgctccttccatcctcttcttcatgatcttcatcatcaa 25443203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 273
Target Start/End: Complemental strand, 27383632 - 27383565
Alignment:
Q  206 aaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| |||| ||||||||  ||||| || ||||| |||||| ||||||| |||||||||||||||||    
T  27383632 aaaaagtaggcttaaatgctcttttgatcccttaagtatttaattggtattgctttggtcccttaact 27383565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 273
Target Start/End: Complemental strand, 43705445 - 43705390
Alignment:
Q  218 taaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||  |||||||| ||||| |||||| |||||||| ||||||||||||||||    
T  43705445 taaatgctcttttggtcccttaactatttaattggtatcactttggtcccttaact 43705390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 5905141 - 5905187
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| || ||||| |||||| |||||||||||||||||||||||||    
T  5905141 ttttgatcccttaactatttaattggtatcgctttggtcccttaact 5905187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 7776470 - 7776516
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| ||| |||||||||||||||||||||    
T  7776470 ttttggtcccttaactatttaattgatatcgctttggtcccttaact 7776516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 17489520 - 17489574
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||  |||||||| ||||| |||||| ||| |||||||||||||||||||    
T  17489520 ttaaatgctcttttggtcccttaactatttaattgatatcgctttggtcccttaa 17489574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 17563694 - 17563640
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||  |||||||| ||||| |||||| ||| |||||||||||||||||||    
T  17563694 ttaaatgctcttttggtcccttaactatttaattgatatcgctttggtcccttaa 17563640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 18458289 - 18458335
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| ||||||||| |||||||||||||||    
T  18458289 ttttggtcccttaactatttaattggtatcgttttggtcccttaact 18458335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 29168834 - 29168888
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||  ||||||||| |||| |||||||||||||| |||||| ||||||||    
T  29168834 ttaaatgctcttttggtcatttaagtatttatttggtattgctttgatcccttaa 29168888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 29771625 - 29771571
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    |||||||| ||||| ||| ||||| |||||| ||||||||| |||||||||||||    
T  29771625 ttaaatgctttttttgtcccttaactatttaattggtatcgttttggtcccttaa 29771571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 42754539 - 42754593
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||  |||| ||| ||||| ||||||||||||||| ||||||||||||||    
T  42754539 ttaaatgctcttttcgtcccttaagtatttatttggtatcactttggtcccttaa 42754593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 44332568 - 44332522
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||| |||||| |||||||||||||||||||||||||    
T  44332568 ttttggtcctttaagtatttaattggtatcgctttggtcccttaact 44332522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 44496123 - 44496077
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| ||||||  ||||||||||||||||||||||||    
T  44496123 ttttggtcccttaagtatttaactggtatcgctttggtcccttaact 44496077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 48094853 - 48094899
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| ||||||||| |||||||||||||||    
T  48094853 ttttggtcccttaactatttaattggtatcgttttggtcccttaact 48094899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 21522232 - 21522277
Alignment:
Q  226 tttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||| ||||||||||||  | ||||||||||||||||||||    
T  21522232 tttttggtcccttaattatttaggtagtatcgctttggtcccttaa 21522277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 23440955 - 23440918
Alignment:
Q  236 cttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  23440955 cttaactatttaattggtatcgctttggtcccttaact 23440918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 267
Target Start/End: Original strand, 26041499 - 26041560
Alignment:
Q  206 aaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtccc 267  Q
    |||||| ||| ||||||||  |||||||| ||||| ||||||||  ||||||||||||||||    
T  26041499 aaaaataaggcttaaatgctcttttggtcccttaagtatttattcagtatcgctttggtccc 26041560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 29414137 - 29414174
Alignment:
Q  236 cttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  29414137 cttaactatttaattggtatcgctttggtcccttaact 29414174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 29933769 - 29933709
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||||||  |||||||| || || |||||| ||| |||||||||||||||||||||    
T  29933769 taggtttaaatgctcttttggtccct-aagtatttaattgatatcgctttggtcccttaact 29933709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 32072749 - 32072692
Alignment:
Q  216 tttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||  ||||| || ||||| |||||| |||||||||||||| ||||||||||    
T  32072749 tttaaatgctcttttgatcccttaagtatttaattggtatcgctttgatcccttaact 32072692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 47305139 - 47305184
Alignment:
Q  226 tttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||| ||||| |||||| || ||||||||||||||||||||    
T  47305139 tttttggtcccttaactatttaattagtatcgctttggtcccttaa 47305184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 712532 - 712588
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||||||||||||  |||||||||||    
T  712532 ttaaatgctcttttggtcccttaactatttaattggtatcgcttacgtcccttaact 712588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 5870338 - 5870282
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| || |||| |||||||||||||||||    
T  5870338 ttaaatgctcttttggtcccttaactatttaattagtattgctttggtcccttaact 5870282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 14708222 - 14708278
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||  ||||| |||||| || ||||||||||||||||||||||    
T  14708222 ttaaatgctcttttggttccttaactatttaatttgtatcgctttggtcccttaact 14708278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 23440464 - 23440520
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||  ||||| |||||| ||| |||||||||||||||||||||    
T  23440464 ttaaatgctcttttggttccttaactatttaattgatatcgctttggtcccttaact 23440520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 30283921 - 30283969
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtc 265  Q
    ||||||||  |||||||| ||||| |||||||||||||||| |||||||    
T  30283921 ttaaatgctcttttggtcccttaagtatttatttggtatcgttttggtc 30283969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 35918794 - 35918738
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| |||||||||  |||| |||||| ||| ||||||||||||| |||||||    
T  35918794 ttaaatgcttttttggtcctttaactatttaattgatatcgctttggtctcttaact 35918738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 41911277 - 41911332
Alignment:
Q  215 gtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    |||||||||  ||||| ||| ||||| |||||| |||||||||||||||||||||||    
T  41911277 gtttaaatgtttttttagtc-cttaagtatttaattggtatcgctttggtcccttaa 41911332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 3e-34; HSPs: 77)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 211 - 425
Target Start/End: Complemental strand, 38385862 - 38385647
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tct 309  Q
    ||||| ||||||||| |||||||| ||||| |||||||||| |||||||||||||||||||||        ||||| ||||||||||||||||||| ||     
T  38385862 ttaggcttaaatgcgcttttggtcccttaactatttatttgatatcgctttggtcccttaactaaaataaagattgtttgagtactttatctttatctcc 38385763  T
Q  310 gttacctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatc 409  Q
    ||||||||||||||||| || ||||                | |||||||||||||||||||||||| ||||||||| ||  |||||||| |||||||||    
T  38385762 gttacctattttggtcctttatgttaaaaaaattcaaaaatccgttagggtttatattattcatcttcttccttctccttccatcatcttcttcatgatc 38385663  T
Q  410 ttcatcatcaacaaca 425  Q
    ||||||||||||||||    
T  38385662 ttcatcatcaacaaca 38385647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 202 - 428
Target Start/End: Original strand, 38384856 - 38385083
Alignment:
Q  202 acttaaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatc 301  Q
    |||||||| ||||| ||||||||||||||| || ||||| |||||||||||||||||||||||||||||| |        ||||| ||||||||||||||    
T  38384856 acttaaaatttaggcttaaatgcgtttttgatcccttaactatttatttggtatcgctttggtcccttaattaaaaaaaagattgtttgagtactttatc 38384955  T
Q  302 tttat-tctgttacctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatcttt 400  Q
    ||||| || | ||||| ||||||||||||| |||                | |||||||||||||||||||||||| |||||| || ||  ||||||||     
T  38384956 tttatctccgctacctgttttggtcccttccgttaaaaaaattcaaaaaaccgttagggtttatattattcatcttcttccttatctttccatcatcttc 38385055  T
Q  401 ttcatgatcttcatcatcaacaacacac 428  Q
    ||||| ||||||||||||||||||||||    
T  38385056 ttcataatcttcatcatcaacaacacac 38385083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 212 - 428
Target Start/End: Complemental strand, 24042739 - 24042522
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctg 310  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||        ||||| ||||||| ||||||||||| || |    
T  24042739 taggcttaaatgcgtttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtattttatctttatctccg 24042640  T
Q  311 ttacctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatct 410  Q
    |||||| ||||||||||||| |||                 ||||||| ||||||||||||||||| ||||||||| ||  ||| || | ||||||||||    
T  24042639 ttacctgttttggtcccttccgttaaataaattcaaaaaaatgttaggatttatattattcatcttcttccttctccttccatcctcctcttcatgatct 24042540  T
Q  411 tcatcatcaacaacacac 428  Q
    ||||||||||||||||||    
T  24042539 tcatcatcaacaacacac 24042522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 200 - 428
Target Start/End: Complemental strand, 37192544 - 37192315
Alignment:
Q  200 caacttaaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtacttta 299  Q
    |||||||||  ||||| ||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||        ||||  ||||||||||||    
T  37192544 caacttaaattttaggcttaaatgtgtttttggtcccttaactatttatttggtatcgctttggtcccttaactaaaaaaaagattatttgagtacttta 37192445  T
Q  300 tctttat-tctgttacctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatct 398  Q
    | ||||| |||||||||| ||||||||||||| |||                | |||||||||||||||||||||||| ||||||||| ||  |||||||    
T  37192444 tatttatctctgttacctgttttggtcccttccgttaaaaaaattcaaaaaaccgttagggtttatattattcatcttcttccttctccttccatcatct 37192345  T
Q  399 ttttcatgatcttcatcatcaacaacacac 428  Q
    | |||||||| |||||||| || |||||||    
T  37192344 tcttcatgatattcatcattaaaaacacac 37192315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 205 - 428
Target Start/End: Original strand, 37191584 - 37191809
Alignment:
Q  205 taaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatcttt 304  Q
    ||||| ||||| ||||||| | |||||||| ||||| | ||||||||||||||||||||||||||||||        ||||| |||||||||||||||||    
T  37191584 taaaatttaggcttaaatgtgcttttggtcccttaactgtttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttatcttt 37191683  T
Q  305 at-tctgttacctattttggtcccttctgttnnnnnnnnnnnnnnnn-ctgttagggtttatattattcatcttattccttctcatttgatcatcttttt 402  Q
    || ||| |||||| |||||||| ||||||||                 ||||||||| |||||||||||||||| ||||||||| ||  ||||||||  |    
T  37191684 atctctattacctgttttggtctcttctgttaaaaaaaattcaaaaaactgttagggcttatattattcatcttcttccttctctttccatcatcttcat 37191783  T
Q  403 catgatcttcatcatcaacaacacac 428  Q
    ||||||||||||||||||||||||||    
T  37191784 catgatcttcatcatcaacaacacac 37191809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 210 - 428
Target Start/End: Original strand, 24041734 - 24041953
Alignment:
Q  210 attaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tc 308  Q
    |||||| ||||||||||||||| || ||||| |||||||||| |||||||||||||||||||||        ||||| ||||||| ||||||||||| ||    
T  24041734 attaggcttaaatgcgtttttgatcccttaagtatttatttgatatcgctttggtcccttaactaaaaaaaagattgtttgagtattttatctttatctc 24041833  T
Q  309 tgttacctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgat 408  Q
     ||||||| ||||||||||||| |||                  |||||||||||||||||||||||| ||||||||| ||  ||| |||| ||||||||    
T  24041834 cgttacctgttttggtcccttccgttaaataaattaaaaaaaacgttagggtttatattattcatcttcttccttctccttccatcctcttcttcatgat 24041933  T
Q  409 cttcatcatcaacaacacac 428  Q
    |||||||||||| |||||||    
T  24041934 cttcatcatcaataacacac 24041953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 227 - 428
Target Start/End: Complemental strand, 28905502 - 28905300
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacctattttggtc 325  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||         |||| ||||||||||||||||||| |||||||||| ||||||||    
T  28905502 ttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaaaattgtttgagtactttatctttatctctgttacctgttttggtc 28905403  T
Q  326 ccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaaca 425  Q
    |||||||||                  ||||| |||| || |||||||||| ||||||||| ||| ||| |||| |||||||||||||||||||||||||    
T  28905402 ccttctgttaaaataaatcaaaaaaacgttagagtttgtactattcatcttcttccttctcctttcatcctcttcttcatgatcttcatcatcaacaaca 28905303  T
Q  426 cac 428  Q
    |||    
T  28905302 cac 28905300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 227 - 428
Target Start/End: Complemental strand, 28941897 - 28941695
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacctattttggtc 325  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||         |||| ||||||||||||||||||| |||||||||| ||||||||    
T  28941897 ttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaaaattgtttgagtactttatctttatctctgttacctgttttggtc 28941798  T
Q  326 ccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaaca 425  Q
    |||||||||                  ||||| |||| || |||||||||| ||||||||| ||| ||| |||| |||||||||||||||||||||||||    
T  28941797 ccttctgttaaaataaatcaaaaaaacgttagagtttgtactattcatcttcttccttctcctttcatcctcttcttcatgatcttcatcatcaacaaca 28941698  T
Q  426 cac 428  Q
    |||    
T  28941697 cac 28941695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 217 - 334
Target Start/End: Complemental strand, 30645782 - 30645664
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacc 315  Q
    ||||||||  |||||||| ||||| ||||||||||||||||||||||||||||||||        ||||| ||||||||||||||||||| |||||||||    
T  30645782 ttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttatctttatctctgttacc 30645683  T
Q  316 tattttggtcccttctgtt 334  Q
    | |||||||||||||||||    
T  30645682 tgttttggtcccttctgtt 30645664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 217 - 428
Target Start/End: Original strand, 13823703 - 13823915
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacc 315  Q
    ||||||||||||||| || ||||| |||||||||||||| |||||||||||||||||        ||||| || |||| ||||||||||| || ||||||    
T  13823703 ttaaatgcgtttttgatcccttaagtatttatttggtattgctttggtcccttaactaaaaaaaagattgtttaagtattttatctttatctccgttacc 13823802  T
Q  316 tattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatc 415  Q
    | ||||||||||||| |||                 ||||||||||||||||||||||||| ||||||||| ||  ||| || | |||||||||||||||    
T  13823803 tgttttggtcccttccgttaaataaattcaaaaaaatgttagggtttatattattcatcttcttccttctccttccatcctcctcttcatgatcttcatc 13823902  T
Q  416 atcaacaacacac 428  Q
    |||||||||||||    
T  13823903 atcaacaacacac 13823915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 212 - 428
Target Start/End: Complemental strand, 39548660 - 39548443
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctg 310  Q
    |||| ||||||||  |||||||| ||||| ||||||||| |||||| |||||||||||||||        ||||| |||||||||||||||| || ||||    
T  39548660 taggcttaaatgctcttttggtcccttaagtatttattttgtatcgttttggtcccttaactaaaaaaaagattgtttgagtactttatcttcatctctg 39548561  T
Q  311 ttacctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatct 410  Q
    |||||| |||||||| ||||||||                  |||||||||| || ||||| |||| ||||||||| ||||||| |||| ||||||||||    
T  39548560 ttacctgttttggtctcttctgttaaaaaaaatcaaaaaaacgttagggtttgtactattcctcttcttccttctcctttgatcctcttcttcatgatct 39548461  T
Q  411 tcatcatcaacaacacac 428  Q
    ||||||||||||||||||    
T  39548460 tcatcatcaacaacacac 39548443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 211 - 428
Target Start/End: Original strand, 19797661 - 19797879
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tct 309  Q
    ||||| ||||||||   ||||||| ||||| |||||||||||||||| |||||||||||||||        ||||| ||||||| ||||| ||||| ||     
T  19797661 ttaggcttaaatgctcgtttggtcccttaagtatttatttggtatcgttttggtcccttaactaaaaaaaagattgtttgagtattttatttttatctcc 19797760  T
Q  310 gttacctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatc 409  Q
    ||||||| |||||||||||||||||                  |||||||||||||||||||||||| ||||||||| ||  |||  ||| |||||||||    
T  19797761 gttacctgttttggtcccttctgttaaataaatttaaaaaaacgttagggtttatattattcatcttcttccttctccttccatccccttcttcatgatc 19797860  T
Q  410 ttcatcatcaacaacacac 428  Q
    |||||||||||||||||||    
T  19797861 ttcatcatcaacaacacac 19797879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 217 - 428
Target Start/End: Complemental strand, 6794834 - 6794622
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacc 315  Q
    |||||||||||||||||| ||||| |||||||||| |||| ||||||||||||||||        ||||| |||||||||||||||| || || |||| |    
T  6794834 ttaaatgcgtttttggtcccttaactatttatttgttatcactttggtcccttaactaaaaaaaagattgtttgagtactttatcttcatctccgttatc 6794735  T
Q  316 tattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatc 415  Q
    | ||||||||||||| |||                  |||||||||| ||||||||||||| ||||||||| ||  ||| || | |||||||||||||||    
T  6794734 tgttttggtcccttccgttaaaaaaattcagaaaaacgttagggtttgtattattcatcttcttccttctctttccatcctcctcttcatgatcttcatc 6794635  T
Q  416 atcaacaacacac 428  Q
    |||||||||||||    
T  6794634 atcaacaacacac 6794622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 217 - 428
Target Start/End: Original strand, 42766820 - 42767032
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacc 315  Q
    ||||||| ||||||| || ||||| ||||||||||||||||||||||||||||||||        ||||| |||||||| |||| ||||| || ||||||    
T  42766820 ttaaatgtgtttttgatcccttaactatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtacattatatttatctccgttacc 42766919  T
Q  316 tattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatc 415  Q
    | ||||||||||||| |||                | |||||||||||||||||||||||| ||||||||| ||  |||||||| ||||| || ||||||    
T  42766920 tgttttggtcccttccgttaaaaaaattccaaaaaccgttagggtttatattattcatcttcttccttctccttccatcatcttcttcataatattcatc 42767019  T
Q  416 atcaacaacacac 428  Q
    || || |||||||    
T  42767020 attaaaaacacac 42767032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 353 - 428
Target Start/End: Complemental strand, 13824563 - 13824488
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||||||||||||||||||||| ||||||||| ||  ||| |||| |||||||||||||||||||| |||||||    
T  13824563 gttagggtttatattattcatcttcttccttctccttccatcctcttcttcatgatcttcatcatcaataacacac 13824488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 212 - 330
Target Start/End: Complemental strand, 19798780 - 19798661
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctg 310  Q
    |||| ||||||||  |||||||| ||||| ||||||||||||||| ||||||||||||||||        ||||| ||||||||||||||||||| ||||    
T  19798780 taggcttaaatgctcttttggtcccttaagtatttatttggtatcactttggtcccttaactaaaaaaaagattgtttgagtactttatctttatctctg 19798681  T
Q  311 ttacctattttggtcccttc 330  Q
    ||| || ||| |||||||||    
T  19798680 ttatctgtttcggtcccttc 19798661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 217 - 334
Target Start/End: Complemental strand, 42767748 - 42767630
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacc 315  Q
    ||||||| | |||||||| ||||| |||||||||||||||| |||||||| ||||||        ||||| ||||||||||||||||||| ||  |||||    
T  42767748 ttaaatgtgcttttggtcccttaactatttatttggtatcgatttggtcctttaactaaaaaaaagattgtttgagtactttatctttatctccattacc 42767649  T
Q  316 tattttggtcccttctgtt 334  Q
    | |||||||||||||||||    
T  42767648 tgttttggtcccttctgtt 42767630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 217 - 428
Target Start/End: Original strand, 14347404 - 14347614
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacc 315  Q
    ||||||||  |||||||| ||||| ||||||||||||||||||||||||||||||||         |||| ||||||||||||||||||| || ||||||    
T  14347404 ttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccttaact--aaaaaaaattgtttgagtactttatctttatctccgttacc 14347501  T
Q  316 tattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatc 415  Q
    | |||||| |||||| |||                  ||||||||||  | ||||| |||| ||||||||| ||| ||| |||| |||||||||||||||    
T  14347502 tgttttggccccttccgttaaaaaaaatcaaaaaaacgttagggtttgcactattcctcttcttccttctcctttcatcctcttcttcatgatcttcatc 14347601  T
Q  416 atcaacaacacac 428  Q
    |||||||||||||    
T  14347602 atcaacaacacac 14347614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 353 - 428
Target Start/End: Original strand, 23082678 - 23082753
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||| ||| ||||||||||||| ||||||||| ||  |||||||| ||||| ||||||||||||||||||||||    
T  23082678 gttaggctttgtattattcatcttcttccttctctttccatcatcttcttcataatcttcatcatcaacaacacac 23082753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 220 - 334
Target Start/End: Complemental strand, 13824698 - 13824583
Alignment:
Q  220 aatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacctat 318  Q
    |||| |||||||||| ||||| |||||| |||||||||||||||||||||||||        ||||| ||||||| ||||||||||| || ||||||| |    
T  13824698 aatgtgtttttggtcccttaagtatttaattggtatcgctttggtcccttaactaaaaaaaagattgtttgagtattttatctttatctccgttacctgt 13824599  T
Q  319 tttggtcccttctgtt 334  Q
    |||||||| ||| |||    
T  13824598 tttggtccattccgtt 13824583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 219 - 273
Target Start/End: Complemental strand, 16920539 - 16920485
Alignment:
Q  219 aaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  16920539 aaatgtgtttttggtcccttaactatttatttggtatcgctttggtcccttaact 16920485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 17339798 - 17339854
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||||||| ||||| |||||| |||||||||||||||||||||||||    
T  17339798 ttaaatgcttttttggtcccttaactatttaattggtatcgctttggtcccttaact 17339854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 39547780 - 39547836
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||||||| ||||| ||||||||||||||||||||||||| ||||||    
T  39547780 ttaaatgcttttttggtcccttaaatatttatttggtatcgctttggtcctttaact 39547836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 3722143 - 3722084
Alignment:
Q  214 ggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||||| ||||||||| ||||| |||||| |||||||||||||||||| ||||||    
T  3722143 ggtttaaatgcttttttggtcccttaaatatttaattggtatcgctttggtcctttaact 3722084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 353 - 428
Target Start/End: Complemental strand, 30645644 - 30645569
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||||||| || ||||| |||| ||||||||| ||  ||| |||| ||||||||||||||||||||||||||||    
T  30645644 gttagggtttgtactattcctcttcttccttctccttccatcttcttcttcatgatcttcatcatcaacaacacac 30645569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 435551 - 435613
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  435551 ttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 435613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 5187182 - 5187120
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  5187182 ttaggcttaaatgctcttttggtcccttaaatatttaattggtatcgctttggtcccttaact 5187120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 4959559 - 4959620
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  4959559 taggcttaaatgctattttggtcccttaactatttaattggtatcgctttggtcccttaact 4959620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 16670088 - 16670027
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  16670088 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 16670027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 27121620 - 27121681
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| |||  ||||||||| ||||| |||||| |||||||||||||||||||||||||    
T  27121620 taggtttatatgtttttttggtcccttaagtatttaattggtatcgctttggtcccttaact 27121681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 435942 - 435874
Alignment:
Q  205 taaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||||||||||||   |||||||| ||||| |||||| ||||||| | |||||||||||||||    
T  435942 taaaaattaggtttaaatgttcttttggtcccttaactatttaattggtattgttttggtcccttaact 435874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 1031359 - 1031303
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  1031359 ttaaatgctcttttggtctcttaactatttaattggtatcgctttggtcccttaact 1031303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 24100755 - 24100699
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  24100755 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 24100699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 25586301 - 25586357
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||||||| ||||| |||||| ||||||| |||||||||||||||||    
T  25586301 ttaaatgcttttttggtcccttaagtatttaattggtattgctttggtcccttaact 25586357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 27098543 - 27098599
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  27098543 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 27098599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 27851098 - 27851042
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  27851098 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 27851042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 29962236 - 29962180
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  29962236 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 29962180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 30012562 - 30012618
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  30012562 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 30012618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 30644917 - 30644973
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||||||||||||||| |||||||||||||    
T  30644917 ttaaatgctcttttggtcccttaaatatttatttggtatcgctatggtcccttaact 30644973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 38312328 - 38312384
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  38312328 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 38312384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 14348938 - 14348997
Alignment:
Q  214 ggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||||  |||||||  ||||| |||||| |||||||||||||||||||||||||    
T  14348938 ggtttaaatgctcttttggtttcttaactatttaattggtatcgctttggtcccttaact 14348997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 226 - 273
Target Start/End: Complemental strand, 17340241 - 17340194
Alignment:
Q  226 tttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||| || |||||||||||| |||||||||||||||||||||||||    
T  17340241 tttttgatcccttaattatttaattggtatcgctttggtcccttaact 17340194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Original strand, 35463560 - 35463619
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    |||| ||||||||  |||||||| ||||| ||||||||||||||||||||| ||||||||    
T  35463560 taggcttaaatgctcttttggtcccttaaatatttatttggtatcgctttgatcccttaa 35463619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 369 - 428
Target Start/End: Complemental strand, 42767604 - 42767545
Alignment:
Q  369 ttcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||||| ||||||||| ||  ||||||||  |||||||||||||||||||||||||||    
T  42767604 ttcatcttcttccttctctttccatcatcttcatcatgatcttcatcatcaacaacacac 42767545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 4077476 - 4077414
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| | ||| |||||| |||||||||||||||||||||||||    
T  4077476 ttaggcttaaatgctcttttggtcccctaaatatttaattggtatcgctttggtcccttaact 4077414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 271
Target Start/End: Complemental strand, 5152990 - 5152944
Alignment:
Q  225 gtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    |||||||||| ||||| ||||||||| ||||||||||||||||||||    
T  5152990 gtttttggtcccttaactatttatttagtatcgctttggtcccttaa 5152944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 6157562 - 6157496
Alignment:
Q  207 aaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| |||| ||||||||  |||||||| ||||| |||||| ||||||||| |||||||||||||||    
T  6157562 aaaactaggcttaaatgctcttttggtcccttaactatttaattggtatcgatttggtcccttaact 6157496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 11079691 - 11079629
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| ||||| |||||| ||||||||| |||||||||||||||    
T  11079691 ttaggcttaaatgctattttggtcccttaactatttaattggtatcgttttggtcccttaact 11079629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 14233154 - 14233093
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| ||||| |||||| ||||||||||||||||| |||||||    
T  14233154 taggcttaaatgctattttggtctcttaagtatttaattggtatcgctttggtctcttaact 14233093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 16920008 - 16920061
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtccctta 270  Q
    ||||||||||||||||||  |||| |||||||||| ||||| ||||||||||||    
T  16920008 ttaaatgcgtttttggtcctttaactatttatttgttatcgttttggtccctta 16920061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 26888583 - 26888644
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| ||||| |||||| || ||||||||||||||||||||||    
T  26888583 taggcttaaatgctcttttggtcccttaactatttaatttgtatcgctttggtcccttaact 26888644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 27098999 - 27098942
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtccctt 269  Q
    |||||||||||||  |||||||| ||||| |||||| ||||||| |||||||||||||    
T  27098999 taggtttaaatgctattttggtctcttaactatttaattggtatagctttggtccctt 27098942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 29961808 - 29961869
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||| ||||||    
T  29961808 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtccattaact 29961869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 1030824 - 1030880
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| |||||||||||| ||| |||||||||||||| ||||||    
T  1030824 ttaaatgctattttggtcccttaattatttaattgatatcgctttggtcctttaact 1030880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 13668564 - 13668508
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  ||||||||  |||| |||||| |||||||||||||||||||||||||    
T  13668564 ttaaatgctcttttggtccattaagtatttaattggtatcgctttggtcccttaact 13668508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 14662376 - 14662420
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    |||||||| ||||| ||||||||||| ||||||||||||||||||    
T  14662376 ttttggtcccttaagtatttatttggcatcgctttggtcccttaa 14662420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 16669509 - 16669565
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||  ||||| |||||| |||||||||||||||||||||||||    
T  16669509 ttaaatgctcttttggttccttaactatttaattggtatcgctttggtcccttaact 16669565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 26888990 - 26888934
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||| |||||||||||||||||||||    
T  26888990 ttaaatgctcttttggtcccttaactatttaattgatatcgctttggtcccttaact 26888934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 27850685 - 27850741
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||| ||||||||||||||||    
T  27850685 ttaaatgctcttttggtcccttaactatttaattggtatctctttggtcccttaact 27850741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 28904633 - 28904689
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||||||||||||| |||| ||||||||||    
T  28904633 ttaaatgctcttttggtcccttaagtatttatttggtatcgttttgatcccttaact 28904689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 28941028 - 28941084
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||||||||||||| |||| ||||||||||    
T  28941028 ttaaatgctcttttggtcccttaagtatttatttggtatcgttttgatcccttaact 28941084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 271
Target Start/End: Original strand, 30112171 - 30112206
Alignment:
Q  236 cttaattatttatttggtatcgctttggtcccttaa 271  Q
    |||||||||||| |||||||||||||||||||||||    
T  30112171 cttaattatttaattggtatcgctttggtcccttaa 30112206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 267
Target Start/End: Complemental strand, 35463932 - 35463877
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtccc 267  Q
    |||| |||||||| |  |||||| ||||| ||||||||||||||||||||||||||    
T  35463932 taggcttaaatgcttacttggtcccttaaatatttatttggtatcgctttggtccc 35463877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 227 - 270
Target Start/End: Complemental strand, 39010701 - 39010658
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtccctta 270  Q
    |||||||| ||||| |||||| ||||||||||||||||||||||    
T  39010701 ttttggtcccttaaatatttagttggtatcgctttggtccctta 39010658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 1095508 - 1095554
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||| ||||| |||||| |||||||||||||||||||||||||    
T  1095508 ttttagtctcttaagtatttaattggtatcgctttggtcccttaact 1095554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 213 - 267
Target Start/End: Complemental strand, 1983617 - 1983563
Alignment:
Q  213 aggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtccc 267  Q
    ||||||||||||  |||||||  ||||| ||||||||| ||||||||||||||||    
T  1983617 aggtttaaatgctcttttggttccttaagtatttatttagtatcgctttggtccc 1983563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 7265659 - 7265613
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| |||||||||||||||| ||||||||    
T  7265659 ttttggtcccttaactatttaattggtatcgctttggttccttaact 7265613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 25333243 - 25333189
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||| ||||    
T  25333243 ttaaatgctattttggtcccttaactatttaattggtatcgctttggtcctttaa 25333189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 30112755 - 30112709
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||| ||||| |||||| |||||||||||||||||||||||||    
T  30112755 ttttagtcccttaagtatttaattggtatcgctttggtcccttaact 30112709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 11079126 - 11079187
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||| |||  |||| |||||| |||||||||||||||||||||||||    
T  11079126 taggcttaaatgctcttttagtccattaactatttaattggtatcgctttggtcccttaact 11079187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 206 - 273
Target Start/End: Complemental strand, 4822159 - 4822095
Alignment:
Q  206 aaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| |||| |||||||| ||||||||| ||||| |||||| ||||||  |||||||||||||||||    
T  4822159 aaaaaataggcttaaatgc-tttttggtcccttaactatttaattggta--gctttggtcccttaact 4822095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 6157139 - 6157195
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  ||| |||| ||||| |||||| |||||||||||||||||| ||||||    
T  6157139 ttaaatgctctttcggtcccttaactatttaattggtatcgctttggtcctttaact 6157195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 20243907 - 20243851
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||||| |||||| ||||||||||||    
T  20243907 ttaaatgctcttttggtcccttaagtatttaattggtgtcgcttgggtcccttaact 20243851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 28904869 - 28904825
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    |||| ||| ||||| ||||||||||||||| ||||||||||||||    
T  28904869 ttttcgtcccttaagtatttatttggtatcactttggtcccttaa 28904825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 28941264 - 28941220
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    |||| ||| ||||| ||||||||||||||| ||||||||||||||    
T  28941264 ttttcgtcccttaagtatttatttggtatcactttggtcccttaa 28941220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 39024012 - 39023956
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| ||||||  |||||||| |||||||||||||||    
T  39024012 ttaaatgctcttttggtcccttaagtatttagatggtatcgttttggtcccttaact 39023956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 39548015 - 39547971
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    |||| ||| ||||| ||||||||||||||| ||||||||||||||    
T  39548015 ttttcgtcccttaagtatttatttggtatcactttggtcccttaa 39547971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 3e-34; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 206 - 428
Target Start/End: Complemental strand, 42541266 - 42541043
Alignment:
Q  206 aaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatcttta 305  Q
    ||||| |||| ||||||| ||||||| || ||||| ||||||||||||||| ||||||||||||||||        ||||| |||||||||||||||| |    
T  42541266 aaaaaataggcttaaatgtgtttttgatcccttaactatttatttggtatcactttggtcccttaactaaaaaaaagattgtttgagtactttatcttca 42541167  T
Q  306 t-tctgttacctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttca 404  Q
    | |||||||||| |||||||||||||||||                 ||||||||||| ||||||||||||| ||||||||  ||| |||||||| ||||    
T  42541166 tctctgttacctgttttggtcccttctgttaaaaaaattcaaaaaaatgttagggtttgtattattcatcttcttccttcttttttcatcatcttcttca 42541067  T
Q  405 tgatcttcatcatcaacaacacac 428  Q
    ||||||||||||||||||||||||    
T  42541066 tgatcttcatcatcaacaacacac 42541043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 212 - 428
Target Start/End: Complemental strand, 32305330 - 32305113
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctg 310  Q
    |||| ||||||| |||||||||| ||||| ||||||||||||||| ||||||||||||||||        ||||| |||||||||||||||| || || |    
T  32305330 taggcttaaatgtgtttttggtcccttaactatttatttggtatcactttggtcccttaactaaaaaaaagattgtttgagtactttatcttcatctccg 32305231  T
Q  311 ttacctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatct 410  Q
    |||||| ||||||||||||| |||                 ||||||||||| ||||||||||||| ||||||||  ||| |||||||| ||||||||||    
T  32305230 ttacctgttttggtcccttccgttaaaaaaattcaaaaaaatgttagggtttgtattattcatcttcttccttcttttttcatcatcttcttcatgatct 32305131  T
Q  411 tcatcatcaacaacacac 428  Q
    ||||||||||||||||||    
T  32305130 tcatcatcaacaacacac 32305113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 219 - 428
Target Start/End: Original strand, 34817336 - 34817546
Alignment:
Q  219 aaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttaccta 317  Q
    ||||| ||||||||||  |||| |||||||||||||||  |||||||||||||||        ||||| ||||||||||||||||||| || |||||||     
T  34817336 aaatgtgtttttggtccattaactatttatttggtatcattttggtcccttaactaaaaaaaagattgtttgagtactttatctttatctccgttacctg 34817435  T
Q  318 ttttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcat 417  Q
    ||||||||||||| |||                  |||||||||| ||||||||||||| ||||||||| ||| ||| |||| |||||||||||||||||    
T  34817436 ttttggtcccttccgttaaaaaaattcaaaaaaacgttagggtttgtattattcatcttcttccttctcctttcatcctcttcttcatgatcttcatcat 34817535  T
Q  418 caacaacacac 428  Q
    |||||||||||    
T  34817536 caacaacacac 34817546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 353 - 425
Target Start/End: Original strand, 33389314 - 33389386
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaaca 425  Q
    |||||||||||||||||||||||| ||||||||| ||  ||||||||||||||||||||||||||||||||||    
T  33389314 gttagggtttatattattcatcttcttccttctccttccatcatctttttcatgatcttcatcatcaacaaca 33389386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 510 - 659
Target Start/End: Original strand, 33389469 - 33389625
Alignment:
Q  510 aattttcccattaaaaaacatccctttcaaacaaaacaacataatttcttaatcttcctaaaccaaa---------atctttatatctaatcaccacaan 600  Q
    |||||| |||||||||| |||||||||||| |||||||||| ||||| | ||||| |||||||||||         |||||||||||||||||||||||     
T  33389469 aatttttccattaaaaa-catccctttcaatcaaaacaacacaatttttcaatctccctaaaccaaatcaaccaaaatctttatatctaatcaccacaat 33389567  T
Q  601 nnnnnnnaaaatccaaaactactctccaccaccacctgcacactactcacctttgcttc 659  Q
           ||| || ||||||||||||||||||||||||| |||||||||||||||||||    
T  33389568 tttttttaaa-tcaaaaactactctccaccaccacctgcgcactactcacctttgcttc 33389625  T

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Target: chr3; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 212 - 330
Target Start/End: Original strand, 54831853 - 54831972
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctg 310  Q
    |||| ||||||||| ||| |||| ||||| ||||||||||||||||||||||||||||||||        ||||| ||||||| ||||||||||| ||||    
T  54831853 taggcttaaatgcgctttcggtcccttaactatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtattttatctttatctctg 54831952  T
Q  311 ttacctattttggtcccttc 330  Q
    |||||| |||||||||||||    
T  54831953 ttacctgttttggtcccttc 54831972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 212 - 330
Target Start/End: Complemental strand, 17514769 - 17514650
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctg 310  Q
    |||| |||||||||||||||||| ||||| ||||||||||||| | ||||||||||||||||        ||||| ||||||||||||||||||| ||      
T  17514769 taggcttaaatgcgtttttggtcccttaactatttatttggtaccactttggtcccttaacttaagaaaagattgtttgagtactttatctttatctcca 17514670  T
Q  311 ttacctattttggtcccttc 330  Q
    |||||| |||||||||||||    
T  17514669 ttacctgttttggtcccttc 17514650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 352 - 428
Target Start/End: Complemental strand, 52255449 - 52255373
Alignment:
Q  352 tgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    ||||||||||||||| ||||||||| || |||||| ||  |||||||| |||||||| |||||||||||||||||||    
T  52255449 tgttagggtttatatcattcatcttctttcttctccttccatcatcttcttcatgattttcatcatcaacaacacac 52255373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 353 - 428
Target Start/End: Original strand, 54834071 - 54834146
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||||||||||||||||||||| |||||| || ||  ||||| || |||||||||||||||| |||||||||||    
T  54834071 gttagggtttatattattcatcttcttccttatccttccatcatattcttcatgatcttcatcaacaacaacacac 54834146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 353 - 427
Target Start/End: Complemental strand, 53228129 - 53228055
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacaca 427  Q
    |||||||||| || ||||| |||| ||||||||| ||| ||| |||| |||||||||||||||||||||||||||    
T  53228129 gttagggtttgtactattcctcttcttccttctcctttcatcttcttcttcatgatcttcatcatcaacaacaca 53228055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 273
Target Start/End: Complemental strand, 51676208 - 51676135
Alignment:
Q  200 caacttaaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||||  |||| ||||||||  |||||||| |||||||||||| ||||||||||||| |||||||||||    
T  51676208 caacttaaaagataggcttaaatgctcttttggtcccttaattatttaattggtatcgctttcgtcccttaact 51676135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 31049137 - 31049077
Alignment:
Q  213 aggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||||| ||||| ||| ||||| |||||| |||||||||||||||||||||||||    
T  31049137 aggtttaaatgcttttttagtcccttaactatttaattggtatcgctttggtcccttaact 31049077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 206 - 273
Target Start/End: Complemental strand, 45940746 - 45940679
Alignment:
Q  206 aaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  45940746 aaaatttaggcttaaatgctattttggtcccttaactatttaattggtatcgctttggtcccttaact 45940679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 24242439 - 24242505
Alignment:
Q  205 taaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||| ||||| ||||||||  |||||||| |||||||||||| ||||||||| |||||||||||||    
T  24242439 taaaatttaggcttaaatgctcttttggtcccttaattatttaattggtatcgttttggtcccttaa 24242505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 24243058 - 24242996
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  24243058 ttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 24242996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 48085300 - 48085238
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  48085300 ttaggcttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaact 48085238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 52255576 - 52255530
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||    
T  52255576 ttttggtcccttaagtatttatttggtatcgctttggtcccttaact 52255530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 52857340 - 52857286
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||  |||||||| ||||| ||||||||||||||||||||||||||||||    
T  52857340 ttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccttaa 52857286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 53228259 - 53228213
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||    
T  53228259 ttttggtcccttaagtatttatttggtatcgctttggtcccttaact 53228213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 12739962 - 12740023
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  12739962 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 12740023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 353 - 426
Target Start/End: Complemental strand, 17514628 - 17514555
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacac 426  Q
    ||||| |||| ||||||| ||||| ||||||||| ||  ||| |||||||| ||||||||||||||||||||||    
T  17514628 gttagagtttgtattattgatcttcttccttctccttccatcctctttttcgtgatcttcatcatcaacaacac 17514555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 217 - 326
Target Start/End: Original strand, 52254306 - 52254416
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacc 315  Q
    ||||||||  ||||||||  |||| |||||||||||||||| |||||||||||||||        ||||| ||||||||||||||||||| || |||| |    
T  52254306 ttaaatgctcttttggtcctttaagtatttatttggtatcgttttggtcccttaactaaaaaaaagattgtttgagtactttatctttatctccgttatc 52254405  T
Q  316 tattttggtcc 326  Q
    | |||||||||    
T  52254406 tgttttggtcc 52254416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 12739881 - 12739937
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  12739881 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 12739937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 29587321 - 29587377
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| |||||| || ||||| |||||| |||||||||||||||||||||||||    
T  29587321 ttaaatgcatttttgctcccttaagtatttaattggtatcgctttggtcccttaact 29587377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 39198430 - 39198474
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    |||||||| |||||||||||| |||||||||||||||||||||||    
T  39198430 ttttggtcccttaattatttaattggtatcgctttggtcccttaa 39198474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 40503242 - 40503298
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  40503242 ttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaact 40503298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 44475708 - 44475652
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  ||||||||  ||||||||||| |||||||||||||||||||||||||    
T  44475708 ttaaatgctcttttggtccattaattatttaattggtatcgctttggtcccttaact 44475652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 44712120 - 44712064
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  44712120 ttaaatgctcttttggtcccttaaatatttaattggtatcgctttggtcccttaact 44712064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 45940218 - 45940274
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  45940218 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 45940274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 212 - 267
Target Start/End: Complemental strand, 13302016 - 13301961
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtccc 267  Q
    |||| ||||||||  |||||||| ||||| ||||||||||||||||||||||||||    
T  13302016 taggcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtccc 13301961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 212 - 267
Target Start/End: Complemental strand, 13312672 - 13312617
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtccc 267  Q
    |||| ||||||||  |||||||| ||||| ||||||||||||||||||||||||||    
T  13312672 taggcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtccc 13312617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 208 - 272
Target Start/End: Complemental strand, 46922130 - 46922064
Alignment:
Q  208 aaattaggtttaaatgcgtttttggtcacttaattat--ttatttggtatcgctttggtcccttaac 272  Q
    ||||| || ||||||||| |||||||| ||||| |||  ||||||||||||||||||||||||||||    
T  46922130 aaattgggcttaaatgcgattttggtctcttaagtatatttatttggtatcgctttggtcccttaac 46922064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 210 - 273
Target Start/End: Original strand, 53246092 - 53246155
Alignment:
Q  210 attaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||| ||||||||  |||||||| ||||| |||| | |||||||||||||||||||||||||    
T  53246092 attaggcttaaatgctcttttggtcccttaactattgaattggtatcgctttggtcccttaact 53246155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 4953127 - 4953181
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||  |||||||| |||||  |||||||||||||||||||||||||||||    
T  4953127 ttaaatgctcttttggtcccttaaggatttatttggtatcgctttggtcccttaa 4953181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 13355788 - 13355726
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  ||||||||  |||| |||||| |||||||||||||||||||||||||    
T  13355788 ttaggcttaaatgctcttttggtcctttaactatttaattggtatcgctttggtcccttaact 13355726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 27990317 - 27990271
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  27990317 ttttggtcccttaactatttaattggtatcgctttggtcccttaact 27990271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 29191863 - 29191801
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| ||||| |||||| ||||||| |||||||||||||||||    
T  29191863 ttaggcttaaatgctcttttggtcccttaactatttaattggtattgctttggtcccttaact 29191801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 40503777 - 40503731
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  40503777 ttttggtcccttaactatttaattggtatcgctttggtcccttaact 40503731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 267
Target Start/End: Original strand, 43464815 - 43464865
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtccc 267  Q
    ||||||||  |||||||| ||||| ||||||||||||||||||||||||||    
T  43464815 ttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtccc 43464865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 966978 - 967039
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||| ||||||    
T  966978 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcctttaact 967039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 36174510 - 36174567
Alignment:
Q  216 tttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||  |||||||| ||||| |||||| |||||||| ||||||||||||||||    
T  36174510 tttaaatgctcttttggtcccttaactatttaattggtatcactttggtcccttaact 36174567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 273
Target Start/End: Complemental strand, 36175055 - 36174986
Alignment:
Q  204 ttaaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||| ||||| ||||||| | ||||||||  |||| |||||| ||||||||||||||| |||||||||    
T  36175055 ttaaaatttaggcttaaatgtgcttttggtccattaactatttaattggtatcgctttggccccttaact 36174986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 48946175 - 48946236
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||| ||| |||||||||||| ||| |||||||||||||||||||||    
T  48946175 taggcttaaatgctctttttgtcccttaattatttaattgatatcgctttggtcccttaact 48946236  T

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Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 6099036 - 6098980
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  ||||||||  |||| |||||| |||||||||||||||||||||||||    
T  6099036 ttaaatgctcttttggtcctttaactatttaattggtatcgctttggtcccttaact 6098980  T

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Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 11218900 - 11218844
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| ||| ||||| |||||| ||||||| |||||||||||||||||    
T  11218900 ttaaatgcttttttagtctcttaactatttaattggtattgctttggtcccttaact 11218844  T

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Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 32309133 - 32309193
Alignment:
Q  213 aggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||||||  ||||||||  |||| |||||| |||||||||||||| ||||||||||    
T  32309133 aggtttaaatgctcttttggtcctttaactatttaattggtatcgctttgatcccttaact 32309193  T

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Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 38731999 - 38731944
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||||||| ||||| | |||| |||||||||||||||||||||||||    
T  38731999 ttaaatgc-tttttggtctcttaactctttaattggtatcgctttggtcccttaact 38731944  T

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Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 41263598 - 41263542
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||||||||||||||||| |||||||    
T  41263598 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtctcttaact 41263542  T

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Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 48946741 - 48946685
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||| ||||||||||||||||    
T  48946741 ttaaatgctcttttggtcccttaactatttaattggtatcactttggtcccttaact 48946685  T

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Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 50531163 - 50531107
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||| ||||||    
T  50531163 ttaaatgctcttttggtcccttaaatatttaattggtatcgctttggtcctttaact 50531107  T

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Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 508 - 576
Target Start/End: Original strand, 52254559 - 52254627
Alignment:
Q  508 ccaattttcccattaaaaaacatccctttcaaacaaaacaacataatttcttaatcttcctaaaccaaa 576  Q
    |||||| | ||||||||||||||||||||||| | |||||| | ||||||| ||||| |||| ||||||    
T  52254559 ccaattgttccattaaaaaacatccctttcaatctaaacaatacaatttctcaatctccctagaccaaa 52254627  T

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Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 53246656 - 53246600
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| |||||| || ||||| |||||| ||||||||| |||||||||||||||    
T  53246656 ttaaatgcttttttgctcccttaactatttaattggtatcgttttggtcccttaact 53246600  T

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Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 228 - 267
Target Start/End: Complemental strand, 4953477 - 4953438
Alignment:
Q  228 tttggtcacttaattatttatttggtatcgctttggtccc 267  Q
    ||||||||||||| |||||||||||||||| |||||||||    
T  4953477 tttggtcacttaaatatttatttggtatcgttttggtccc 4953438  T

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Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 273
Target Start/End: Complemental strand, 8327813 - 8327766
Alignment:
Q  226 tttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||| || ||||| |||||||||||||||| |||||||||||||||    
T  8327813 tttttgatcccttaactatttatttggtatcggtttggtcccttaact 8327766  T

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Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 393 - 428
Target Start/End: Original strand, 52254460 - 52254495
Alignment:
Q  393 tcatctttttcatgatcttcatcatcaacaacacac 428  Q
    ||||||| ||||||||||||||||||||||||||||    
T  52254460 tcatcttcttcatgatcttcatcatcaacaacacac 52254495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 875980 - 876026
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| ||||||||||||| |||||||||||    
T  875980 ttttggtcccttaactatttaattggtatcgctttagtcccttaact 876026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 8100585 - 8100631
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| |||| ||||||||||||||||||||    
T  8100585 ttttggtcccttaagtatttaattggcatcgctttggtcccttaact 8100631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 13355166 - 13355232
Alignment:
Q  205 taaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    |||||| |||| |||||||   |||| ||| ||||| |||||| |||||||||||||||||||||||    
T  13355166 taaaaaataggcttaaatgttcttttagtcccttaactatttaattggtatcgctttggtcccttaa 13355232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 28919092 - 28919146
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||  ||||||||  |||| |||||| |||||||||||||||||||||||    
T  28919092 ttaaatgctcttttggtcgattaagtatttaattggtatcgctttggtcccttaa 28919146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 40410699 - 40410769
Alignment:
Q  201 aacttaaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||| | ||||| || ||| ||||||||| ||||| ||||||  | ||||||||||||||||||||    
T  40410699 aacttaaaattaaggttaaattgcatttttggtcccttaactatttaggtagtatcgctttggtcccttaa 40410769  T

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Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 50530630 - 50530676
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||| ||||| |||||| |||||||||||||||||||||||||    
T  50530630 ttttagtcccttaagtatttaattggtatcgctttggtcccttaact 50530676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 6098626 - 6098687
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||  ||||| |||||| ||||||||||||||| |||||||||    
T  6098626 taggcttaaatgctcttttggtgccttaactatttaattggtatcgctttgggcccttaact 6098687  T

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Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 6276061 - 6276106
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttg 262  Q
    ||||||||  |||||||| ||||| |||||||||||||||||||||    
T  6276061 ttaaatgctcttttggtcccttaagtatttatttggtatcgctttg 6276106  T

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Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 8101103 - 8101042
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||||||  ||||| ||| ||||| |||||| ||||||||| |||| ||||||||||    
T  8101103 taggtttaaatgtttttttagtctcttaagtatttaattggtatcgttttgctcccttaact 8101042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 12740390 - 12740353
Alignment:
Q  236 cttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||||| ||||||||||| |||||||||||||    
T  12740390 cttaattatttaattggtatcgctatggtcccttaact 12740353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 262
Target Start/End: Complemental strand, 24244828 - 24244783
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttg 262  Q
    ||||||||  |||||||| ||||| |||||||||||||||||||||    
T  24244828 ttaaatgctattttggtcccttaagtatttatttggtatcgctttg 24244783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 214 - 267
Target Start/End: Complemental strand, 26247237 - 26247184
Alignment:
Q  214 ggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtccc 267  Q
    ||||||||||   |||||||| ||||| ||||||||| ||||||||||||||||    
T  26247237 ggtttaaatgttcttttggtcccttaagtatttatttagtatcgctttggtccc 26247184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 32309649 - 32309604
Alignment:
Q  228 tttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||  |||| |||||| |||||||||||||||||||||||||    
T  32309649 tttggtcctttaactatttaattggtatcgctttggtcccttaact 32309604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 34521278 - 34521323
Alignment:
Q  226 tttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||| ||||||||||||  | ||||||||||||||||||||    
T  34521278 tttttggtcccttaattatttaggtagtatcgctttggtcccttaa 34521323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 273
Target Start/End: Original strand, 44475314 - 44475366
Alignment:
Q  220 aatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||| ||||||| |||| |||||||||||||||||| ||||||    
T  44475314 aatgcttttttggtcccttaatt-tttaattggtatcgctttggtcctttaact 44475366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 54108494 - 54108449
Alignment:
Q  226 tttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||| ||||||||||||  | ||||||||||||||||||||    
T  54108494 tttttggtcccttaattatttagctagtatcgctttggtcccttaa 54108449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 211 - 271
Target Start/End: Original strand, 14353043 - 14353103
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||| || ||| |||||| || ||||||||||||  | ||||||||||||||||||||    
T  14353043 ttaggttaaattgcatttttgatcccttaattatttaggtagtatcgctttggtcccttaa 14353103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 227 - 267
Target Start/End: Original strand, 26246881 - 26246921
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtccc 267  Q
    |||||||| ||||| |||||||||||||||| |||||||||    
T  26246881 ttttggtcccttaagtatttatttggtatcgttttggtccc 26246921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 211 - 271
Target Start/End: Original strand, 41208398 - 41208458
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||| || ||| ||||||||| ||||| ||||||  | ||||||||||||||||||||    
T  41208398 ttaggttaaattgcatttttggtcccttaactatttaagtagtatcgctttggtcccttaa 41208458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 41263029 - 41263085
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  ||||| || ||||| |||||| |||||||||||||||| ||||||||    
T  41263029 ttaaatgctcttttgctcccttaactatttaattggtatcgctttggttccttaact 41263085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 47872519 - 47872575
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| || ||||||||||| ||||||||||    
T  47872519 ttaaatgctcttttggtcccttaactatttaattagtatcgctttgctcccttaact 47872575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 52706697 - 52706641
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  || ||||| ||||| | |||||||||||||||||| |||||||||||    
T  52706697 ttaaatgctcttgtggtctcttaagtttttatttggtatcgcttttgtcccttaact 52706641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 2e-32; HSPs: 102)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 217 - 428
Target Start/End: Original strand, 31697118 - 31697330
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacc 315  Q
    ||||||||  |||||||| ||||| ||||||||||||||||||||||||||||||||         |||  ||||||||||||||||||| |||||||||    
T  31697118 ttaaatgctcttttggtcccttaaatatttatttggtatcgctttggtcccttaactaaaaaaaaaattatttgagtactttatctttatatctgttacc 31697217  T
Q  316 tattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatc 415  Q
    |||||||||||||||||||                | |||||||||||||||||| ||||| ||||||||| ||  ||| |||| |||||||||||||||    
T  31697218 tattttggtcccttctgttaaataaattcaaaaaaccgttagggtttatattatttatcttcttccttctccttccatcctcttcttcatgatcttcatc 31697317  T
Q  416 atcaacaacacac 428  Q
    |||||||||||||    
T  31697318 atcaacaacacac 31697330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 508 - 659
Target Start/End: Original strand, 52750446 - 52750607
Alignment:
Q  508 ccaattttcccattaaaa-aacatccctttcaaacaaaacaacataatttcttaatcttccta---------aaccaaaatctttatatctaatcaccac 597  Q
    |||||||| ||||||||| |||||||||||||| |||||||||| ||||||| ||||||||||         ||||||||||||||||||||||||| ||    
T  52750446 ccaatttttccattaaaaaaacatccctttcaatcaaaacaacacaatttctcaatcttcctaaaccaaatcaaccaaaatctttatatctaatcactac 52750545  T
Q  598 aannnnnnnnaaaatccaaaactactctccaccaccacctgcacactactcacctttgcttc 659  Q
    ||        |||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  52750546 aattttttttaaaatccaaaactactctccaccaccacctgggcactactcacctttgcttc 52750607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 212 - 422
Target Start/End: Original strand, 29021580 - 29021791
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctg 310  Q
    |||| ||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||        ||||| ||||||||||||||||||| ||||    
T  29021580 taggcttaaatgtgtttttggtcccttaactatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttatctttatctctg 29021679  T
Q  311 ttacctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatct 410  Q
    |||||| |||||||||||||||||                || ||||||||||||| ||||||||| ||||||||  ||  ||||||||  |||||||||    
T  29021680 ttacctgttttggtcccttctgttaaaaaaaatcaaaaaactattagggtttatatcattcatcttcttccttctatttccatcatcttcatcatgatct 29021779  T
Q  411 tcatcatcaaca 422  Q
    |||||| |||||    
T  29021780 tcatcaacaaca 29021791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 217 - 428
Target Start/End: Original strand, 51241727 - 51241939
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatcttta-ttctgttacc 315  Q
    |||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||        ||||| ||||||| |||||||||| ||| ||||||    
T  51241727 ttaaattcgtttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtattttatctttacttccgttacc 51241826  T
Q  316 tattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatc 415  Q
    | ||||||||||||| |||                  || ||||||||||||||||||||| ||||||||| ||  ||| |||| |||||||||||||||    
T  51241827 tgttttggtcccttccgttaaataaattcaaaaaaacgtcagggtttatattattcatcttcttccttctccttccatcctcttcttcatgatcttcatc 51241926  T
Q  416 atcaacaacacac 428  Q
    |||||||||||||    
T  51241927 atcaacaacacac 51241939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 217 - 436
Target Start/End: Original strand, 52750165 - 52750375
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttattctgttacct 316  Q
    |||||||| ||||||||  || || ||||||||||||||||||||||||||||||||        ||||| ||||||||||||||||||||| |||||||    
T  52750165 ttaaatgcatttttggttcctcaactatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttatctttattccgttacct 52750264  T
Q  317 attttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatca 416  Q
    |||||||||| |||||||                  |||||||||||||||||         |||||||| || | ||||||||||||||||||||||||    
T  52750265 attttggtccattctgttaaaaaaattgaaaaaatcgttagggtttatattat---------tccttctccttcggtcatctttttcatgatcttcatca 52750355  T
Q  417 tcaacaacacacaccaaccc 436  Q
    ||||||||||||||||||||    
T  52750356 tcaacaacacacaccaaccc 52750375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 227 - 428
Target Start/End: Complemental strand, 16659949 - 16659747
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacctattttggtc 325  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||         |||| ||||||||||||||||||| |||||||||| ||||||||    
T  16659949 ttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaaaattgtttgagtactttatctttatctctgttacctgttttggtc 16659850  T
Q  326 ccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaaca 425  Q
    |||||||||                  ||||| |||| || |||||||||| ||||||||| ||| ||| |||| |||||||||||||||||||||||||    
T  16659849 ccttctgttaaaataaatcaaaaaaacgttagagtttgtactattcatcttcttccttctcctttcatcctcttcttcatgatcttcatcatcaacaaca 16659750  T
Q  426 cac 428  Q
    |||    
T  16659749 cac 16659747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 217 - 428
Target Start/End: Original strand, 50123694 - 50123910
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttga----gtactttatctttatt-ctgt 311  Q
    ||||||||| ||||| || ||||| |||||||||||||||||||||||| |||||||        ||||| ||||    ||||||||| |||||| | ||    
T  50123694 ttaaatgcgcttttgatcccttaactatttatttggtatcgctttggtctcttaactaaaaaaaagattgtttgattgagtactttatatttatttccgt 50123793  T
Q  312 tacctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatctt 411  Q
    |||||||||||||||||||||||                  |||||||||||||||||||||||| ||||||||| ||  |||||||| |||||||||||    
T  50123794 tacctattttggtcccttctgttaaaaaaattcaaaaaatcgttagggtttatattattcatctttttccttctccttccatcatcttcttcatgatctt 50123893  T
Q  412 catcatcaacaacacac 428  Q
    |||||||||||||||||    
T  50123894 catcatcaacaacacac 50123910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 217 - 428
Target Start/End: Original strand, 49652401 - 49652613
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttattc-tgttacc 315  Q
    ||||||||| |||||||  ||||| ||||||||||||||| ||||||||||||||||        ||||| ||||||||||||||||||| | |||||||    
T  49652401 ttaaatgcgcttttggtaccttaactatttatttggtatcactttggtcccttaactaaaaaaaagattgtttgagtactttatctttatccctgttacc 49652500  T
Q  316 tattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatc 415  Q
    ||||||||||  ||| |||                 ||||||||||| |||||||||||||  |||||||| ||  ||| |||| |||||||||||||||    
T  49652501 tattttggtcttttccgttaaaaaaattcgaaaaaatgttagggtttgtattattcatcttcatccttctccttccatcctcttcttcatgatcttcatc 49652600  T
Q  416 atcaacaacacac 428  Q
    |||||||||||||    
T  49652601 atcaacaacacac 49652613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 217 - 330
Target Start/End: Original strand, 24326585 - 24326699
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacc 315  Q
    ||||||||  |||||||| ||||| ||||||||||||||||||||||||||||||||        ||||  ||||||||||||||||||| || ||||||    
T  24326585 ttaaatgctcttttggtcccttaactatttatttggtatcgctttggtcccttaactaaaaaaaagattatttgagtactttatctttatctccgttacc 24326684  T
Q  316 tattttggtcccttc 330  Q
    |||||||||||||||    
T  24326685 tattttggtcccttc 24326699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 217 - 330
Target Start/End: Complemental strand, 24332369 - 24332255
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacc 315  Q
    ||||||||  ||||||||  |||| ||||||||||||||||||||||||||||||||        ||||  ||||||||||||||||||| || ||||||    
T  24332369 ttaaatgctcttttggtcctttaactatttatttggtatcgctttggtcccttaactaaaaaaaagattatttgagtactttatctttatctccgttacc 24332270  T
Q  316 tattttggtcccttc 330  Q
    |||||||||||||||    
T  24332269 tattttggtcccttc 24332255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 353 - 428
Target Start/End: Original strand, 24508349 - 24508424
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||| || |||||||||||||| ||||||||| ||  |||||||| ||||||||||||||||||||||||||||    
T  24508349 gttaggattcatattattcatcttcttccttctccttccatcatcttcttcatgatcttcatcatcaacaacacac 24508424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 353 - 428
Target Start/End: Original strand, 36142250 - 36142325
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||||||| ||||||||||||| ||||||||| ||  ||| |||| ||||||||||||||||||||||||||||    
T  36142250 gttagggtttgtattattcatcttcttccttctctttccatcctcttcttcatgatcttcatcatcaacaacacac 36142325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 229 - 428
Target Start/End: Complemental strand, 38658919 - 38658719
Alignment:
Q  229 ttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacctattttggtccc 327  Q
    |||||| ||||| |||||||||| ||| |||||||||||||||||        ||||| ||||||||||||| ||||| || ||||||| ||||||||||    
T  38658919 ttggtcccttaagtatttatttgatattgctttggtcccttaactaaaaaaaagattgtttgagtactttatatttatctccgttacctgttttggtccc 38658820  T
Q  328 ttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacaca 427  Q
    |||||||                  ||||||||||||| ||||  |||| ||||||||| ||| ||| |||| |||||||||||||||||||||||||||    
T  38658819 ttctgttaaaaaaaatcaaaaaaacgttagggtttatactatttctcttcttccttctcctttcatcctcttcttcatgatcttcatcatcaacaacaca 38658720  T
Q  428 c 428  Q
    |    
T  38658719 c 38658719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 49548120 - 49548181
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||||||| ||||||||| ||||| |||||| |||||||||||||||||||||||||    
T  49548120 taggtttaaatgcttttttggtcccttaactatttaattggtatcgctttggtcccttaact 49548181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 1524008 - 1524064
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||    
T  1524008 ttaaatgcgtttttggtcccttaactatttatttggtatcactttggtcccttaact 1524064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 352 - 428
Target Start/End: Original strand, 47112233 - 47112309
Alignment:
Q  352 tgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    ||||||||||| ||||||||||||| ||||||||  ||| |||||||| |||| ||| |||||||||||||||||||    
T  47112233 tgttagggtttgtattattcatcttcttccttcttttttcatcatcttcttcaagattttcatcatcaacaacacac 47112309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 202 - 273
Target Start/End: Original strand, 31488013 - 31488084
Alignment:
Q  202 acttaaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||| |||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  31488013 acttaaaaagtaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 31488084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 353 - 428
Target Start/End: Complemental strand, 51242895 - 51242820
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||| ||||||||||||||||||| ||||||||  ||  ||| |||| ||||||||||||||||||||||||||||    
T  51242895 gttaaggtttatattattcatcttcttccttcttcttccatcctcttcttcatgatcttcatcatcaacaacacac 51242820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 361 - 428
Target Start/End: Complemental strand, 52751472 - 52751405
Alignment:
Q  361 ttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||||||||||||| ||||||||| ||  |||||||| |||||||| |||||||||||||||||||    
T  52751472 ttatattattcatcttcttccttctccttccatcatcttcttcatgattttcatcatcaacaacacac 52751405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 212 - 330
Target Start/End: Complemental strand, 29022609 - 29022490
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctg 310  Q
    |||| ||||||| | |||||||  ||||| ||||||||||||||| ||||||||||||||||        ||||| || |||||||||||||||| || |    
T  29022609 taggcttaaatgtgcttttggttccttaactatttatttggtatcactttggtcccttaactaaaaaaaagattgtttaagtactttatctttatctccg 29022510  T
Q  311 ttacctattttggtcccttc 330  Q
    |||||| |||||||||||||    
T  29022509 ttacctgttttggtcccttc 29022490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 354 - 428
Target Start/End: Complemental strand, 50124518 - 50124444
Alignment:
Q  354 ttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    ||||| ||||||||||||||||| |||||| || ||  |||||||| ||||| ||||||||||||||||||||||    
T  50124518 ttaggatttatattattcatcttcttccttatccttctatcatcttcttcataatcttcatcatcaacaacacac 50124444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 5806038 - 5805977
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||||||  |||||||| ||||| |||||||||||||||| |||||||||||||||    
T  5806038 taggtttaaatgctcttttggtctcttaagtatttatttggtatcgttttggtcccttaact 5805977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 7964111 - 7964172
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| ||||| ||||||||||||||||||||||||||||||||    
T  7964111 taggcttaaatgctcttttggtcccttaactatttatttggtatcgctttggtcccttaact 7964172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 24381221 - 24381160
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| |||||||||||| |||||||||||||||||||||||||    
T  24381221 taggcttaaatgctcttttggtcccttaattatttaattggtatcgctttggtcccttaact 24381160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 210 - 271
Target Start/End: Original strand, 33784298 - 33784359
Alignment:
Q  210 attaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    |||||| ||||||| |||||||||| ||||| |||||| |||||||||||||||||||||||    
T  33784298 attaggcttaaatgtgtttttggtcccttaactatttaattggtatcgctttggtcccttaa 33784359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 5804696 - 5804752
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| ||||||||||||||||||||||||||||||||    
T  5804696 ttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccttaact 5804752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 7334446 - 7334502
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||| |||||||||| ||||| |||||| |||||||||||||||||||||||||    
T  7334446 ttaaatgtgtttttggtcccttaactatttaattggtatcgctttggtcccttaact 7334502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 508 - 589
Target Start/End: Original strand, 49652675 - 49652758
Alignment:
Q  508 ccaattttcccattaaaaaacatccctttcaaacaaaacaacataatttcttaatcttcct--aaaccaaaatctttatatcta 589  Q
    |||||||| ||||| | ||||||| ||||||| | |||||||| ||||||| |||||||||  |||||||||||||||||||||    
T  49652675 ccaatttttccatttataaacatctctttcaatctaaacaacacaatttctcaatcttcctaaaaaccaaaatctttatatcta 49652758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 51243038 - 51242978
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||| |||||||||||||| ||| ||||| |||||||| |||||||||||||||||||||    
T  51243038 ttaggcttaaatgcgtttttagtcccttaagtatttattcggtatcgctttggtcccttaa 51242978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 52179430 - 52179370
Alignment:
Q  213 aggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||||| ||||||||| ||||| |||||| |||||||||||||||||| ||||||    
T  52179430 aggtttaaatgcttttttggtcccttaactatttaattggtatcgctttggtcctttaact 52179370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 210 - 273
Target Start/End: Complemental strand, 3798772 - 3798709
Alignment:
Q  210 attaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  3798772 attaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 3798709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 206 - 273
Target Start/End: Complemental strand, 44114584 - 44114517
Alignment:
Q  206 aaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| |||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  44114584 aaaaaataggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 44114517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 37483604 - 37483542
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  37483604 ttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 37483542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 38980115 - 38980053
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  38980115 ttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 38980053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 45678365 - 45678431
Alignment:
Q  207 aaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||| ||||||||  ||||| || ||||| |||||| |||||||||||||||||||||||||    
T  45678365 aaaattaggcttaaatgctcttttgatcccttaactatttaattggtatcgctttggtcccttaact 45678431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 50227979 - 50227913
Alignment:
Q  207 aaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  50227979 aaaataaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 50227913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 229 - 330
Target Start/End: Original strand, 967906 - 968008
Alignment:
Q  229 ttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacctattttggtccc 327  Q
    |||||| ||||| |||||||||||||||| ||||||||||||||         ||||| ||||||||||||| ||||| | ||||||||||||||||| |    
T  967906 ttggtcccttaagtatttatttggtatcgttttggtcccttaacaaaaataaagattgtttgagtactttatttttatctatgttacctattttggtctc 968005  T
Q  328 ttc 330  Q
    |||    
T  968006 ttc 968008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 354 - 427
Target Start/End: Complemental strand, 969083 - 969010
Alignment:
Q  354 ttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacaca 427  Q
    ||||||||||||||||| ||||| ||||||||| ||  |||  ||| |||||||||||||| ||||||||||||    
T  969083 ttagggtttatattatttatcttcttccttctccttccatccccttcttcatgatcttcattatcaacaacaca 969010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 34023634 - 34023573
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||||||  |||| ||| ||||| |||||| |||||||||||||||||||||||||    
T  34023634 taggtttaaatgctcttttagtcccttaactatttaattggtatcgctttggtcccttaact 34023573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 37708190 - 37708251
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||  |||||||||||| |||||||||||||||||||||||||    
T  37708190 taggcttaaatgctcttttggttccttaattatttaattggtatcgctttggtcccttaact 37708251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 3798327 - 3798383
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  3798327 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 3798383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 5598521 - 5598577
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  5598521 ttaaatgctcttttggtcgcttaactatttaattggtatcgctttggtcccttaact 5598577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 7965565 - 7965509
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||||||||||||| |||||||||||||||    
T  7965565 ttaaatgctcttttggtcccttaactatttatttggtatcgttttggtcccttaact 7965509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 14244615 - 14244559
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  14244615 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 14244559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 24231540 - 24231484
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  24231540 ttaaatgctcttttggtctcttaactatttaattggtatcgctttggtcccttaact 24231484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 24370118 - 24370174
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  24370118 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 24370174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 508 - 576
Target Start/End: Original strand, 24508490 - 24508558
Alignment:
Q  508 ccaattttcccattaaaaaacatccctttcaaacaaaacaacataatttcttaatcttcctaaaccaaa 576  Q
    ||||||||  |||||||||||||||||||||| | |||||||| ||||||| ||||| |||| ||||||    
T  24508490 ccaattttttcattaaaaaacatccctttcaatctaaacaacacaatttctcaatctccctagaccaaa 24508558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 28050070 - 28050014
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  28050070 ttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaact 28050014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 334
Target Start/End: Complemental strand, 31698342 - 31698222
Alignment:
Q  214 ggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgtt 312  Q
    ||||||||||   |||||||  ||||| ||||||||||||||||||||| ||||||||||         |||| ||||||||||||||||||| || |||    
T  31698342 ggtttaaatgttcttttggttccttaaatatttatttggtatcgctttgatcccttaact-aaaaaaaaattgtttgagtactttatctttatctccgtt 31698244  T
Q  313 acctattttggtcccttctgtt 334  Q
    | ||||||||||| ||||||||    
T  31698243 agctattttggtctcttctgtt 31698222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 37483057 - 37483113
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  37483057 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 37483113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 45678715 - 45678771
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  45678715 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 45678771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 46448220 - 46448276
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  46448220 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 46448276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 50138498 - 50138554
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  50138498 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 50138554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 6714763 - 6714704
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    |||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||    
T  6714763 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaa 6714704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 218 - 273
Target Start/End: Complemental strand, 33171894 - 33171839
Alignment:
Q  218 taaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||  |||||||||||||| |||||| |||||||| ||||||||||||||||    
T  33171894 taaatgctcttttggtcacttaagtatttaattggtatcactttggtcccttaact 33171839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 1040184 - 1040138
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  1040184 ttttggtctcttaaatatttaattggtatcgctttggtcccttaact 1040138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 1047090 - 1047044
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  1047090 ttttggtctcttaaatatttaattggtatcgctttggtcccttaact 1047044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 6328375 - 6328329
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  6328375 ttttggtcccttaagtatttaattggtatcgctttggtcccttaact 6328329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 7334989 - 7334927
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| ||||| |||||| ||||||||| |||||||||||||||    
T  7334989 ttaggcttaaatgctcttttggtcccttaactatttaattggtatcgttttggtcccttaact 7334927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 9478253 - 9478315
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| ||||| |||||| ||||||||||| |||||||||||||    
T  9478253 ttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctatggtcccttaact 9478315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 33784666 - 33784620
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  33784666 ttttggtcccttaactatttaattggtatcgctttggtcccttaact 33784620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 35368859 - 35368913
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||    
T  35368859 ttaaatgctcttttggtcccttaaatatttaattggtatcgctttggtcccttaa 35368913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 35814451 - 35814397
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||    
T  35814451 ttaaatgctcttttggtcccttaagtatttacttggtatcgctttggtcccttaa 35814397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 37708640 - 37708578
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| ||||| |||||| |||||||||||||| ||||||||||    
T  37708640 ttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttgatcccttaact 37708578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 359 - 428
Target Start/End: Complemental strand, 29022472 - 29022403
Alignment:
Q  359 gtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||||||||||||||| ||||||||| ||  |||| ||| |||||||| |||||||| || |||||||    
T  29022472 gtttatattattcatcttcttccttctccttccatcaccttcttcatgatattcatcattaaaaacacac 29022403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 6137236 - 6137292
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||| ||||||||||||||||    
T  6137236 ttaaatgctcttttggtcccttaactatttaattggtatcactttggtcccttaact 6137292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 6714205 - 6714261
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  ||||||||  |||| |||||| |||||||||||||||||||||||||    
T  6714205 ttaaatgctcttttggtccgttaactatttaattggtatcgctttggtcccttaact 6714261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 7121875 - 7121819
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||||||||| |||||||||||||||    
T  7121875 ttaaatgctcttttggtcccttaactatttaattggtatcgttttggtcccttaact 7121819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 9478672 - 9478616
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  ||||| || ||||| |||||| |||||||||||||||||||||||||    
T  9478672 ttaaatgctcttttgatcccttaactatttaattggtatcgctttggtcccttaact 9478616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 15073418 - 15073474
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  ||||| || ||||| |||||| |||||||||||||||||||||||||    
T  15073418 ttaaatgctcttttgatcccttaactatttaattggtatcgctttggtcccttaact 15073474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 15073982 - 15073926
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||  ||||| |||||| |||||||||||||||||||||||||    
T  15073982 ttaaatgctattttggttccttaactatttaattggtatcgctttggtcccttaact 15073926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 16659080 - 16659136
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||||||||||||| |||| ||||||||||    
T  16659080 ttaaatgctcttttggtcccttaagtatttatttggtatcgttttgatcccttaact 16659136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 31488467 - 31488411
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||||||||| |||||||||||||||    
T  31488467 ttaaatgctcttttggtcccttaactatttaattggtatcgatttggtcccttaact 31488411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 32194050 - 32193994
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||  ||||| |||||| |||||||||||||||||||||||||    
T  32194050 ttaaatgctcttttggttccttaactatttaattggtatcgctttggtcccttaact 32193994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 38979674 - 38979730
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||  |||||||||||||||||||||||||    
T  38979674 ttaaatgctcttttggtcccttaactatttcattggtatcgctttggtcccttaact 38979730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 39851177 - 39851233
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  ||||||||  |||| |||||| |||||||||||||||||||||||||    
T  39851177 ttaaatgctcttttggtcctttaactatttaattggtatcgctttggtcccttaact 39851233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 46448796 - 46448740
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||| ||| ||||| |||||| |||||||||||||||||||||||||    
T  46448796 ttaaatgctcttttagtcccttaactatttaattggtatcgctttggtcccttaact 46448740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 50138925 - 50138869
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||||||||||||| |||||||||||    
T  50138925 ttaaatgctcttttggtcccttaactatttaattggtatcgctttagtcccttaact 50138869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 50227518 - 50227574
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||||||||||||||| |||||||||    
T  50227518 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggccccttaact 50227574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 267
Target Start/End: Complemental strand, 50682632 - 50682592
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtccc 267  Q
    |||||||| ||||||||||| ||||||||||||||||||||    
T  50682632 ttttggtcccttaattatttttttggtatcgctttggtccc 50682592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 264
Target Start/End: Complemental strand, 10719688 - 10719641
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggt 264  Q
    ||||||||  |||||||| ||||| |||||||||||||||||||||||    
T  10719688 ttaaatgctcttttggtcccttaagtatttatttggtatcgctttggt 10719641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 428
Target Start/End: Original strand, 968036 - 968106
Alignment:
Q  358 ggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    ||||| ||||||||||||| ||| ||||| ||  ||| |||| ||||||||||||||||| || |||||||    
T  968036 ggtttgtattattcatcttcttctttctccttccatcctcttcttcatgatcttcatcataaaaaacacac 968106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 231 - 273
Target Start/End: Original strand, 6327958 - 6328000
Alignment:
Q  231 ggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||| |||||| |||||||||||||||||||||||||    
T  6327958 ggtcccttaactatttaattggtatcgctttggtcccttaact 6328000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 267
Target Start/End: Original strand, 10719359 - 10719409
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtccc 267  Q
    ||||||||  |||||||| ||||| ||||||||| ||||||||||||||||    
T  10719359 ttaaatgctcttttggtcccttaagtatttatttagtatcgctttggtccc 10719409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 353 - 399
Target Start/End: Complemental strand, 31698203 - 31698157
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctt 399  Q
    ||||| |||||||||||||||||| ||||||||| ||| ||||||||    
T  31698203 gttagagtttatattattcatcttcttccttctcctttcatcatctt 31698157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 38657689 - 38657735
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||  ||||| |||||||||||||||| |||||||||||||||    
T  38657689 ttttggtatcttaagtatttatttggtatcgttttggtcccttaact 38657735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 39851596 - 39851542
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||  |||||||| ||||| |||||| ||||||||| |||||||||||||    
T  39851596 ttaaatgctcttttggtcccttaactatttaattggtatcgttttggtcccttaa 39851542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 4550974 - 4550929
Alignment:
Q  226 tttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||| ||||| |||||| || ||||||||||||||||||||    
T  4550974 tttttggtctcttaactatttaattagtatcgctttggtcccttaa 4550929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 8678154 - 8678191
Alignment:
Q  236 cttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  8678154 cttaattatttaattggtatcgctttggtcctttaact 8678191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 10923374 - 10923419
Alignment:
Q  226 tttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||| ||||||||||||  | ||||||||||||||||||||    
T  10923374 tttttggtcccttaattatttaggtagtatcgctttggtcccttaa 10923419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 10923737 - 10923692
Alignment:
Q  226 tttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||| ||||| ||||||  ||||||||||||||||||||||    
T  10923737 tttttggtcccttaactatttaagtggtatcgctttggtcccttaa 10923692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 14244164 - 14244225
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||  ||||| |||||| ||| |||||||||||||||||||||    
T  14244164 taggcttaaatgctcttttggttccttaactatttaattgatatcgctttggtcccttaact 14244225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 18793703 - 18793748
Alignment:
Q  226 tttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||| ||||||||||||  | ||||||||||||||||||||    
T  18793703 tttttggtcccttaattatttaggtagtatcgctttggtcccttaa 18793748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 48984365 - 48984304
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| ||||| |||||| ||||||||  |||||||||||||||    
T  48984365 taggcttaaatgctcttttggtcccttaaatatttaattggtatctatttggtcccttaact 48984304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 16659316 - 16659272
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    |||| ||| ||||| ||||||||||||||| ||||||||||||||    
T  16659316 ttttcgtcccttaagtatttatttggtatcactttggtcccttaa 16659272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 20257971 - 20258023
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtccctt 269  Q
    ||||||||  |||||||| ||||| |||||| ||||||||| |||||||||||    
T  20257971 ttaaatgctcttttggtcccttaactatttaattggtatcgttttggtccctt 20258023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 24508213 - 24508269
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||| |||| |||| |||||||||||||||| |||| ||||||||||    
T  24508213 ttaaatgctctttttgtcatttaagtatttatttggtatcgttttgatcccttaact 24508269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 226 - 270
Target Start/End: Complemental strand, 40703239 - 40703195
Alignment:
Q  226 tttttggtcacttaattatttatttggtatcgctttggtccctta 270  Q
    ||||||||| ||||| |||||| || |||||||||||||||||||    
T  40703239 tttttggtcccttaactatttaattagtatcgctttggtccctta 40703195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 42616698 - 42616754
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  ||||||||  |||| |||||| ||||||||| |||||||||||||||    
T  42616698 ttaaatgctcttttggtcctttaagtatttaattggtatcgttttggtcccttaact 42616754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 45679292 - 45679256
Alignment:
Q  237 ttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| |||||| |||||||||||||||||||||||||    
T  45679292 ttaactatttaattggtatcgctttggtcccttaact 45679256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 48497792 - 48497848
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||||||  ||||| |||||| |||||||||||  ||||||||||||    
T  48497792 ttaaatgcttttttggttccttaagtatttaattggtatcgctccggtcccttaact 48497848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 48498255 - 48498199
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||  ||||| |||||| |||||||||||||| ||||||||||    
T  48498255 ttaaatgctcttttggttccttaagtatttaattggtatcgctttgatcccttaact 48498199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 3e-28; HSPs: 70)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 204 - 428
Target Start/End: Original strand, 44553118 - 44553343
Alignment:
Q  204 ttaaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctt 303  Q
    |||||||  ||| |||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||        ||||| ||||||| ||||||||    
T  44553118 ttaaaaaaaaggcttaaatgcgtttttggtcccttaagtatttatttggtatcgttttggtcccttaactaaaaaaaagattgtttgagtattttatctt 44553217  T
Q  304 tat-tctgttacctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatcttttt 402  Q
    ||| || ||||||| ||||||||||||| |||                 ||||||||||||||||||||||||| |||||||||  |  ||| || | ||    
T  44553218 tatctccgttacctgttttggtcccttccgttaaataaattcaaaaaaatgttagggtttatattattcatcttcttccttctccctccatcttcctctt 44553317  T
Q  403 catgatcttcatcatcaacaacacac 428  Q
    ||||||||||||||||||||||||||    
T  44553318 catgatcttcatcatcaacaacacac 44553343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 227 - 334
Target Start/End: Original strand, 22594331 - 22594439
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacctattttggtc 325  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||        ||||| ||||||||||||||||||| |||||||||| ||||||||    
T  22594331 ttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttatctttatctctgttacctgttttggtc 22594430  T
Q  326 ccttctgtt 334  Q
    |||||||||    
T  22594431 ccttctgtt 22594439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 217 - 428
Target Start/End: Original strand, 13462109 - 13462320
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttattctgttacct 316  Q
    |||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||        ||||| |||||||||||||||| ||    ||||||    
T  13462109 ttaaatgcgtttttggtcccttaactatttatttggtatcactttggtcccttaactaaaaaaaagattgtttgagtactttatcttcatcgcattacct 13462208  T
Q  317 attttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatca 416  Q
     ||||||||||||| |||                  |||||| ||| ||||||||||||| ||||||||| ||  |||||||| ||||||||||||||||    
T  13462209 gttttggtcccttccgttaaaaaaattcaaaaaaacgttaggctttgtattattcatcttcttccttctctttcaatcatcttcttcatgatcttcatca 13462308  T
Q  417 tcaacaacacac 428  Q
    ||||||||||||    
T  13462309 tcaacaacacac 13462320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 211 - 428
Target Start/End: Original strand, 13364046 - 13364264
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tct 309  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||||| ||||||||||||||||        ||||| ||||||| ||||| |||||  |     
T  13364046 ttaggtttaaatgcgtttttggtcccttaaatatttatttagtatcactttggtcccttaactaaaaaaaagattgtttgagtattttatttttatcccc 13364145  T
Q  310 gttacctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatc 409  Q
    ||||||| ||||||||||||| |||                 ||||||||||||||||||||||||| ||||||||| ||  ||| || | |||||||||    
T  13364146 gttacctgttttggtcccttccgttaaataaattcaaaaaaatgttagggtttatattattcatcttcttccttctccttccatcctcctcttcatgatc 13364245  T
Q  410 ttcatcatcaacaacacac 428  Q
    ||||||||||||| |||||    
T  13364246 ttcatcatcaacagcacac 13364264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 206 - 273
Target Start/End: Original strand, 7116464 - 7116531
Alignment:
Q  206 aaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  7116464 aaaaattaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 7116531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 26060693 - 26060631
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| |||||||||||| |||||||||||||||||||||||||    
T  26060693 ttaggcttaaatgctcttttggtcccttaattatttaattggtatcgctttggtcccttaact 26060631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 2222026 - 2221965
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  2222026 taggtttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 2221965  T

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Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 30864162 - 30864222
Alignment:
Q  213 aggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  30864162 aggtttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaact 30864222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 31988517 - 31988573
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||||||| ||||| |||||| |||||||||||||||||||||||||    
T  31988517 ttaaatgcttttttggtcccttaactatttaattggtatcgctttggtcccttaact 31988573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 37035393 - 37035449
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||| |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  37035393 ttaaatgcgcttttggtcccttaactatttaattggtatcgctttggtcccttaact 37035449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 40229093 - 40229149
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||||||| ||||| |||||| |||||||||||||||||||||||||    
T  40229093 ttaaatgcttttttggtcccttaactatttaattggtatcgctttggtcccttaact 40229149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 214 - 269
Target Start/End: Original strand, 16905255 - 16905310
Alignment:
Q  214 ggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtccctt 269  Q
    |||||||||||  |||||||| ||||| ||||||||||||||||||||||||||||    
T  16905255 ggtttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtccctt 16905310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 353 - 428
Target Start/End: Complemental strand, 16906382 - 16906307
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||| ||| || ||||| |||| ||||||||| ||| ||| |||| ||||||||||||||||||||||||||||    
T  16906382 gttaggatttgtactattcctcttcttccttctcctttcatcctcttcttcatgatcttcatcatcaacaacacac 16906307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 206 - 273
Target Start/End: Original strand, 31445661 - 31445728
Alignment:
Q  206 aaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| |||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  31445661 aaaaaataggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 31445728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 212 - 271
Target Start/End: Original strand, 43633121 - 43633180
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    |||| |||||||| ||||||||| ||||| |||||| |||||||||||||||||||||||    
T  43633121 taggcttaaatgcttttttggtcccttaactatttaattggtatcgctttggtcccttaa 43633180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 207 - 273
Target Start/End: Original strand, 3292010 - 3292076
Alignment:
Q  207 aaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||| ||||||||  |||||||| |||||||||||| ||||||||| |||||||||||||||    
T  3292010 aaaataaggcttaaatgcacttttggtcccttaattatttaattggtatcgttttggtcccttaact 3292076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 3444181 - 3444119
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| |||||||| ||||||||| ||||| |||||| || ||||||||||||||||||||||    
T  3444181 ttaggcttaaatgcttttttggtcccttaagtatttaattagtatcgctttggtcccttaact 3444119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 11713197 - 11713259
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  11713197 ttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 11713259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 215 - 273
Target Start/End: Original strand, 13089439 - 13089497
Alignment:
Q  215 gtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  13089439 gtttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 13089497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 204 - 273
Target Start/End: Original strand, 26060096 - 26060165
Alignment:
Q  204 ttaaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||| | ||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  26060096 ttaaaattaaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 26060165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 761396 - 761452
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  761396 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 761452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 2221597 - 2221653
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  2221597 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 2221653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 7117171 - 7117115
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||| |||||||||| ||||| |||||| |||||||||||||| ||||||||||    
T  7117171 ttaaatgtgtttttggtcccttaactatttaattggtatcgctttgatcccttaact 7117115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 9739840 - 9739784
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  9739840 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 9739784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 22013465 - 22013521
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  22013465 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 22013521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 25825357 - 25825301
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  25825357 ttaaatgctcttttggtctcttaactatttaattggtatcgctttggtcccttaact 25825301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 27786540 - 27786484
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  27786540 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 27786484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 41154620 - 41154676
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  41154620 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 41154676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 41155069 - 41155013
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  41155069 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 41155013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 42193782 - 42193838
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  42193782 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 42193838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 45123223 - 45123279
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  45123223 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 45123279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 206 - 273
Target Start/End: Original strand, 9115593 - 9115660
Alignment:
Q  206 aaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| |||| ||||||||  |||||||| ||||| |||||| ||||||||||||||||||| |||||    
T  9115593 aaaaaataggcttaaatgctattttggtcccttaagtatttagttggtatcgctttggtcccctaact 9115660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 353 - 428
Target Start/End: Original strand, 22594461 - 22594536
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||||||| || ||||| |||| |||| |||| ||| ||| ||||  |||||||||||||||||||||||||||    
T  22594461 gttagggtttgtactattcctcttcttccgtctcctttcatcctcttcatcatgatcttcatcatcaacaacacac 22594536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 331
Target Start/End: Complemental strand, 9319384 - 9319282
Alignment:
Q  229 ttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacctattttggtccc 327  Q
    |||||| ||||| |||||||||||||||| |||||||||||||||        ||  | ||||||||||||| ||||| |||||||||| ||||||||||    
T  9319384 ttggtcccttaagtatttatttggtatcgttttggtcccttaact-aaaaagagaccgtttgagtactttatttttatctctgttacctgttttggtccc 9319286  T
Q  328 ttct 331  Q
    ||||    
T  9319285 ttct 9319282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 9807341 - 9807279
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| ||||| |||||| ||||||||| |||||||||||||||    
T  9807341 ttaggcttaaatgctcttttggtcccttaactatttaattggtatcgttttggtcccttaact 9807279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 15271136 - 15271182
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||||    
T  15271136 ttttggtcacttaagtatttaattggtatcactttggtcccttaact 15271182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 33099035 - 33098969
Alignment:
Q  207 aaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| |||| ||||||||  |||||||| ||||| |||||| ||||||||| |||||||||||||||    
T  33099035 aaaagtaggcttaaatgctcttttggtcccttaactatttaattggtatcgatttggtcccttaact 33098969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 762231 - 762170
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| ||||| |||||| ||| |||||||||||||||||||||    
T  762231 taggcttaaatgctcttttggtcccttaactatttaattgatatcgctttggtcccttaact 762170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Original strand, 3443045 - 3443090
Alignment:
Q  228 tttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||| ||||| |||||| |||||||||||||||||||||||||    
T  3443045 tttggtcccttaagtatttaattggtatcgctttggtcccttaact 3443090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 229 - 334
Target Start/End: Complemental strand, 16906507 - 16906401
Alignment:
Q  229 ttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacctattttggtccc 327  Q
    |||||| ||| | |||||||||||||||||||||||||||||| |         |||| ||||||||||||| ||||| || ||||||| |||||||||     
T  16906507 ttggtcccttgagtatttatttggtatcgctttggtcccttaattaaaaaaaatattgtttgagtactttatatttatctccgttacctgttttggtcca 16906408  T
Q  328 ttctgtt 334  Q
    |||||||    
T  16906407 ttctgtt 16906401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 7791650 - 7791706
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||||| |||||||||||||||||||    
T  7791650 ttaaatgctcttttggtcccttaactatttaattggtctcgctttggtcccttaact 7791706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 7812234 - 7812290
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||||| |||||||||||||||||||    
T  7812234 ttaaatgctcttttggtcccttaactatttaattggtctcgctttggtcccttaact 7812290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 9739279 - 9739335
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||  ||||||||| ||||| |||||| ||||||||| |||||||||||||||    
T  9739279 ttaaatgtttttttggtcccttaactatttaattggtatcgttttggtcccttaact 9739335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 11713625 - 11713569
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||| | |||||||||||||||||||||||||    
T  11713625 ttaaatgctcttttggtcccttaactattcaattggtatcgctttggtcccttaact 11713569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 11760970 - 11760914
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||||||||| |||||||||||||||    
T  11760970 ttaaatgctcttttggtcccttaactatttaattggtatcgttttggtcccttaact 11760914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 14897451 - 14897395
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  ||||||||  |||| |||||| |||||||||||||||||||||||||    
T  14897451 ttaaatgctcttttggtcctttaactatttaattggtatcgctttggtcccttaact 14897395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 18476139 - 18476071
Alignment:
Q  205 taaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||| ||||||||  |||||||| ||||| |||||| || |||||||||||||||| |||||    
T  18476139 taaaatttaggcttaaatgctcttttggtcccttaactatttaatttgtatcgctttggtcccctaact 18476071  T

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Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 22014007 - 22013951
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||  ||||| |||||| |||||||||||||||||||||||||    
T  22014007 ttaaatgctcttttggttccttaactatttaattggtatcgctttggtcccttaact 22013951  T

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Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 22323996 - 22323940
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||| ||||||||||||||||    
T  22323996 ttaaatgctcttttggtcccttaagtatttaattggtatcactttggtcccttaact 22323940  T

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Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 23017243 - 23017187
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||||||||| |||||||||||||||    
T  23017243 ttaaatgctcttttggtcccttaagtatttagttggtatcggtttggtcccttaact 23017187  T

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Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 27785969 - 27786025
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||| ||||||||    
T  27785969 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggttccttaact 27786025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 40449308 - 40449252
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||||||||||||||||| |||||||    
T  40449308 ttaaatgctattttggtcccttaagtatttaattggtatcgctttggtctcttaact 40449252  T

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Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 43633644 - 43633588
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  ||||| || ||||| |||||| |||||||||||||||||||||||||    
T  43633644 ttaaatgcacttttgatcccttaactatttaattggtatcgctttggtcccttaact 43633588  T

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Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 45466348 - 45466292
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||||||||||||||||| |||||||    
T  45466348 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcacttaact 45466292  T

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Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 8000852 - 8000793
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    |||||||||||||  |||||||| ||||| |||||| |||| ||||||||| ||||||||    
T  8000852 taggtttaaatgctcttttggtcccttaagtatttaattggcatcgctttgatcccttaa 8000793  T

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Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 9317028 - 9317083
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaac 272  Q
    ||||||||  |||||||| ||||| |||||||||| |||| |||||||||||||||    
T  9317028 ttaaatgctcttttggtcccttaagtatttatttgatatcactttggtcccttaac 9317083  T

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Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 267
Target Start/End: Original strand, 10134606 - 10134661
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtccc 267  Q
    |||| ||||||||  |||| ||| ||||| ||||||||||||||||||||||||||    
T  10134606 taggcttaaatgctctttttgtcccttaagtatttatttggtatcgctttggtccc 10134661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 273
Target Start/End: Complemental strand, 45434313 - 45434266
Alignment:
Q  226 tttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||| |||||||||||| ||||||||| ||||||| |||||||    
T  45434313 tttttggtcccttaattatttaattggtatcgttttggtctcttaact 45434266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 11174213 - 11174167
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| | |||| |||||||||||||||||||||||||    
T  11174213 ttttggtcccttaagtttttaattggtatcgctttggtcccttaact 11174167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 40448736 - 40448782
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||| |||||| |||||||||||||||||||||||||    
T  40448736 ttttggtccattaagtatttaattggtatcgctttggtcccttaact 40448782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 43086930 - 43086884
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| ||||||||| |||||||||||||||    
T  43086930 ttttggtcccttaactatttaattggtatcgttttggtcccttaact 43086884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 43273881 - 43273835
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| |||||||||||||| ||||||||||    
T  43273881 ttttggtcccttaagtatttaattggtatcgctttgatcccttaact 43273835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 271
Target Start/End: Complemental strand, 7041998 - 7041953
Alignment:
Q  226 tttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||| ||||| ||||||| | ||||||||||||||||||||    
T  7041998 tttttggtcccttaactatttatatagtatcgctttggtcccttaa 7041953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 11760462 - 11760499
Alignment:
Q  236 cttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  11760462 cttaactatttaattggtatcgctttggtcccttaact 11760499  T

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Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 271
Target Start/End: Original strand, 40032438 - 40032483
Alignment:
Q  226 tttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||||||||||||||||  | |||||||||||||| |||||    
T  40032438 tttttggtcacttaattatttaggtagtatcgctttggtctcttaa 40032483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 428
Target Start/End: Complemental strand, 9319211 - 9319179
Alignment:
Q  396 tctttttcatgatcttcatcatcaacaacacac 428  Q
    |||| ||||||||||||||||||||||||||||    
T  9319211 tcttcttcatgatcttcatcatcaacaacacac 9319179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 31988955 - 31988899
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||||||||||||||| || ||||||    
T  31988955 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggccctttaact 31988899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 33098590 - 33098646
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  ||| |||| ||||| |||||| |||||||||||||||||| ||||||    
T  33098590 ttaaatgctctttcggtcccttaactatttaattggtatcgctttggtcctttaact 33098646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 40229693 - 40229637
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| || ||||| ||||||||||||||||    
T  40229693 ttaaatgctcttttggtcccttaactatttaatttgtatcactttggtcccttaact 40229637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 43086391 - 43086447
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| || |||||| |||||||||||||||    
T  43086391 ttaaatgctcttttggtcccttaactatttaattagtatcgttttggtcccttaact 43086447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 3e-28; HSPs: 98)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 212 - 428
Target Start/End: Original strand, 11108291 - 11108507
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctg 310  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||        ||||| ||||||| ||||||||||  || |    
T  11108291 taggcttaaatgcgtttttggtcccttaagtatttatttggtatcgctttggtcc-ttaactaaaaaaaagattgtttgagtattttatctttacctccg 11108389  T
Q  311 ttacctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatct 410  Q
    |||||| ||||||||||||| |||                 ||||||||||||||||||||||||| ||||||||| ||  ||| |||| ||||||||||    
T  11108390 ttacctgttttggtcccttccgttaaataaattcaaaaaaatgttagggtttatattattcatcttcttccttctccttccatcctcttcttcatgatct 11108489  T
Q  411 tcatcatcaacaacacac 428  Q
    ||||||||||||||||||    
T  11108490 tcatcatcaacaacacac 11108507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 227 - 428
Target Start/End: Complemental strand, 50282975 - 50282775
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacctattttggtc 325  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||         |||| || |||||||||||||||| |||||||||| ||||||||    
T  50282975 ttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaa--attgtttaagtactttatctttatctctgttacctgttttggtc 50282878  T
Q  326 ccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaaca 425  Q
    ||||| |||                 ||||||||||||||||||| ||||| ||||||||| ||  |||||||| |||||||||||||||||||||||||    
T  50282877 ccttccgttaaaaaaattcaaaaaaatgttagggtttatattattgatcttcttccttctccttccatcatcttcttcatgatcttcatcatcaacaaca 50282778  T
Q  426 cac 428  Q
    |||    
T  50282777 cac 50282775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 217 - 428
Target Start/End: Original strand, 11815863 - 11816076
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnn-gattgcttgagtactttatctttat-tctgttac 314  Q
    ||||||| | |||||||| ||||| ||||||||||||||||||||||||||||||||         ||||| |||||||| |||||||||| || |||||    
T  11815863 ttaaatgtgcttttggtcccttaactatttatttggtatcgctttggtcccttaactaaaaaaaaagattgtttgagtacattatctttatctccgttac 11815962  T
Q  315 ctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcat 414  Q
    || |||||||||||||||||                |||||| ||||||||||||||||||| |||||| || ||  ||||||||  |||||||||||||    
T  11815963 ctgttttggtcccttctgttaaaaaaattcaaaaaactgttacggtttatattattcatcttcttccttttctttccatcatcttgatcatgatcttcat 11816062  T
Q  415 catcaacaacacac 428  Q
    ||||||||||||||    
T  11816063 catcaacaacacac 11816076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 217 - 428
Target Start/End: Original strand, 45044371 - 45044583
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacc 315  Q
    ||||||||| ||||| || || || |||||||||||||||||||||||| |||||||        ||||| ||||||||||||||||||| || ||||||    
T  45044371 ttaaatgcgcttttgatccctaaactatttatttggtatcgctttggtctcttaactaaaaaaaagattgtttgagtactttatctttatctccgttacc 45044470  T
Q  316 tattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatc 415  Q
    | |||||||||||| ||||                | |||||||||||||||||||||||| |||||| || ||  |||||||| ||||| |||||||||    
T  45044471 tgttttggtcccttatgttaaaaaaattcaaaaaaccgttagggtttatattattcatcttcttccttatccttccatcatcttcttcataatcttcatc 45044570  T
Q  416 atcaacaacacac 428  Q
    |||||||||||||    
T  45044571 atcaacaacacac 45044583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 212 - 334
Target Start/End: Complemental strand, 45046968 - 45046845
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatcttta-ttctg 310  Q
    |||| ||||||||| ||||||||  |||| |||||||||||||||| |||||||||||||||        ||||| |||| ||||||||||||| ||| |    
T  45046968 taggcttaaatgcgcttttggtcctttaactatttatttggtatcgttttggtcccttaactaaaaaaaagattgtttgaatactttatctttatttccg 45046869  T
Q  311 ttacctattttggtcccttctgtt 334  Q
    ||||||||||||||||||||||||    
T  45046868 ttacctattttggtcccttctgtt 45046845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 354 - 428
Target Start/End: Original strand, 50281821 - 50281895
Alignment:
Q  354 ttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    ||||||||||||||||||||||| ||||||||| ||  |||||||| ||||||||||||||||||||||||||||    
T  50281821 ttagggtttatattattcatcttcttccttctccttccatcatcttcttcatgatcttcatcatcaacaacacac 50281895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 211 - 428
Target Start/End: Original strand, 2734794 - 2735012
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tct 309  Q
    |||||||||||||   |||||||| ||||| ||||||||| |||||| |||||||||||||||        ||||| |||||||||||||||| || ||     
T  2734794 ttaggtttaaatgttcttttggtcccttaagtatttattttgtatcgttttggtcccttaactaaaaaaaagattgtttgagtactttatcttcatctcc 2734893  T
Q  310 gttacctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatc 409  Q
    ||||||| |||||||| ||||||||                  |||||||||| || ||||| |||| ||||||||| ||||||| |||| |||||||||    
T  2734894 gttacctgttttggtctcttctgttaaaaaaaatcaaaaaaacgttagggtttgtactattcctcttcttccttctcctttgatcctcttcttcatgatc 2734993  T
Q  410 ttcatcatcaacaacacac 428  Q
    |||||||||||||||||||    
T  2734994 ttcatcatcaacaacacac 2735012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 353 - 428
Target Start/End: Original strand, 9091565 - 9091640
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||||||||||||||||||||| ||||||||| ||   ||||||| ||||||||||||||||||||||||||||    
T  9091565 gttagggtttatattattcatcttcttccttctccttccttcatcttattcatgatcttcatcatcaacaacacac 9091640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 353 - 428
Target Start/End: Complemental strand, 13631719 - 13631644
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    ||||||||||| |||||||||||| ||||||||| ||  |||||||| ||||||||||||||||||||||||||||    
T  13631719 gttagggtttacattattcatcttcttccttctccttccatcatcttcttcatgatcttcatcatcaacaacacac 13631644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 211 - 428
Target Start/End: Original strand, 44182559 - 44182777
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tct 309  Q
    ||||| ||||||||   |||||||  |||| |||||||||||||||| |||||||||||||||        ||||| ||||||||||||||||||| ||     
T  44182559 ttaggcttaaatgctcatttggtcctttaagtatttatttggtatcgttttggtcccttaactaaaaaaaagattgtttgagtactttatctttatctcc 44182658  T
Q  310 gttacctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatc 409  Q
    ||||||| ||||||||| |||||||                  ||||| || ||||||||||||||| ||||||||| ||  |||||||| |||||||||    
T  44182659 gttacctgttttggtcctttctgttaaaaaattgaaaaaaaacgttagagtgtatattattcatcttcttccttctccttccatcatcttcttcatgatc 44182758  T
Q  410 ttcatcatcaacaacacac 428  Q
    |||||||||||||| ||||    
T  44182759 ttcatcatcaacaaaacac 44182777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 212 - 428
Target Start/End: Complemental strand, 26281310 - 26281094
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctg 310  Q
    |||| |||||||| |  |||||| ||||| |||||||||||||||| |||||||||||||||        ||||| ||||||||||||||||||| || |    
T  26281310 taggcttaaatgcttaattggtcccttaagtatttatttggtatcgttttggtcccttaactaaaaaaaagattgtttgagtactttatctttatctccg 26281211  T
Q  311 ttacctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatct 410  Q
    |||||||||||||||||||| |||                  |||||| ||||||||||||||||| ||||||||| ||  |||  ||| |||||||||     
T  26281210 ttacctattttggtcccttccgttaaataaattcaaaaaaacgttagg-tttatattattcatcttcttccttctccttccatccccttcttcatgatcg 26281112  T
Q  411 tcatcatcaacaacacac 428  Q
    ||||||||||||||||||    
T  26281111 tcatcatcaacaacacac 26281094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 353 - 428
Target Start/End: Original strand, 26280213 - 26280288
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||||||| ||||||||||||| ||||||||| ||  |||||||| |||||||||||||||||||| |||||||    
T  26280213 gttagggtttttattattcatcttcttccttctccttccatcatcttcttcatgatcttcatcatcaaaaacacac 26280288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 353 - 424
Target Start/End: Complemental strand, 31081621 - 31081550
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaac 424  Q
    |||||||||||||||||||||||| ||||||||| ||  ||||| || ||||||||||||||||||||||||    
T  31081621 gttagggtttatattattcatctttttccttctccttccatcattttcttcatgatcttcatcatcaacaac 31081550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 360 - 425
Target Start/End: Complemental strand, 45045199 - 45045134
Alignment:
Q  360 tttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaaca 425  Q
    ||||||||||||||||| ||||||||| ||  |||||||| |||||||||||||||||||||||||    
T  45045199 tttatattattcatcttcttccttctccttccatcatcttcttcatgatcttcatcatcaacaaca 45045134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 217 - 428
Target Start/End: Complemental strand, 43630377 - 43630164
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacc 315  Q
    ||||||||||||||||||  || | ||||||||||||||||||||||||| ||||||        ||||| ||||||| ||||||||||| || ||||||    
T  43630377 ttaaatgcgtttttggtccttttagtatttatttggtatcgctttggtcctttaactaaaaaaaagattgtttgagtattttatctttatctccgttacc 43630278  T
Q  316 tattttggtcccttctgtt-nnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcat 414  Q
    | |||||| ||||| ||||                  |||| |||||||||||||||||||| ||| ||||| ||  ||| |||| ||||||||||||||    
T  43630277 tgttttggccccttatgttaaataaattcaaaaaaaatgttggggtttatattattcatcttcttcattctccttccatcctcttcttcatgatcttcat 43630178  T
Q  415 catcaacaacacac 428  Q
    ||||||||||||||    
T  43630177 catcaacaacacac 43630164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 217 - 428
Target Start/End: Complemental strand, 11816809 - 11816597
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacc 315  Q
    ||||||| |||||||||| ||||| |||||||||| ||||| |||| ||| ||||||        ||||| ||||||| ||||||||||| || ||||||    
T  11816809 ttaaatgtgtttttggtcccttaactatttatttgatatcgttttgatcctttaactaaaaaaaagattgtttgagtattttatctttatctccgttacc 11816710  T
Q  316 tattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatc 415  Q
    | ||||||||||||| |||                | |||||| ||||||||||||||||| ||||||||| ||  |||||||| |||||||| ||||||    
T  11816709 tgttttggtcccttccgttaaaaaaattcaaaaaaccgttaggatttatattattcatcttcttccttctccttccatcatcttcttcatgatattcatc 11816610  T
Q  416 atcaacaacacac 428  Q
    || || |||||||    
T  11816609 attaaaaacacac 11816597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 353 - 428
Target Start/End: Complemental strand, 24297074 - 24296999
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||| ||||||||||||||||| ||| ||||| ||  ||| |||| ||||||||||||||||||||||||||||    
T  24297074 gttaggatttatattattcatcttcttcattctccttctatcctcttcttcatgatcttcatcatcaacaacacac 24296999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 353 - 428
Target Start/End: Original strand, 40680605 - 40680680
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||| ||| ||||||||||||| ||||||||| ||  ||| |||| ||||||||||||||||||||||||||||    
T  40680605 gttaggctttgtattattcatcttcttccttctctttccatcctcttcttcatgatcttcatcatcaacaacacac 40680680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 227 - 334
Target Start/End: Complemental strand, 53596194 - 53596086
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacctattttggtc 325  Q
    |||||||| ||||| |||||||||||||||| |||||| ||||||||        ||||| ||||||||||||||||||| || ||||||| ||||||||    
T  53596194 ttttggtcccttaagtatttatttggtatcgttttggttccttaactaaaaaaaagattgtttgagtactttatctttatctccgttacctgttttggtc 53596095  T
Q  326 ccttctgtt 334  Q
     ||||||||    
T  53596094 tcttctgtt 53596086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 34237479 - 34237540
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  34237479 taggtttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 34237540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 208 - 273
Target Start/End: Original strand, 48453627 - 48453692
Alignment:
Q  208 aaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  48453627 aaataaggtttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 48453692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 211 - 331
Target Start/End: Original strand, 43629176 - 43629297
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tct 309  Q
    ||||||||||||||  |||||||| ||||| |||||||||||||||| |||||| ||||||||         |||| ||||||||||||| ||||| | |    
T  43629176 ttaggtttaaatgctcttttggtctcttaagtatttatttggtatcgttttggttccttaactaaaaaaaaaattgtttgagtactttatttttatctat 43629275  T
Q  310 gttacctattttggtcccttct 331  Q
    ||||||| |||||||| |||||    
T  43629276 gttacctgttttggtctcttct 43629297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 46058694 - 46058754
Alignment:
Q  213 aggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  46058694 aggtttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 46058754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 206 - 273
Target Start/End: Complemental strand, 17475949 - 17475882
Alignment:
Q  206 aaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||| ||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  17475949 aaaaataaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 17475882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 209 - 271
Target Start/End: Complemental strand, 51399589 - 51399526
Alignment:
Q  209 aattaggtttaaatgcg-tttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||| ||||||||  ||||||||| ||||| ||||||||||||||||||||||||||||||    
T  51399589 aattaggcttaaatgctctttttggtcccttaagtatttatttggtatcgctttggtcccttaa 51399526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 9087238 - 9087180
Alignment:
Q  370 tcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    ||||||| ||||||||| ||  |||||||| ||||||||||||||||||||||||||||    
T  9087238 tcatcttcttccttctctttctatcatcttcttcatgatcttcatcatcaacaacacac 9087180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 42369570 - 42369508
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  42369570 ttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 42369508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 216 - 274
Target Start/End: Original strand, 46579779 - 46579837
Alignment:
Q  216 tttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactg 274  Q
    |||||||| |||||||||| ||||| |||||| |||||||||||||||||| |||||||    
T  46579779 tttaaatgtgtttttggtcccttaactatttaattggtatcgctttggtcctttaactg 46579837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 2735661 - 2735600
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| ||||| ||||||||||||||||||||||||| ||||||    
T  2735661 taggcttaaatgctcttttggtcccttaaatatttatttggtatcgctttggtcctttaact 2735600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 14947183 - 14947244
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||||||  |||||||| ||||| |||||| |||||||||||||| ||||||||||    
T  14947183 taggtttaaatgctcttttggtcccttaagtatttaattggtatcgctttgatcccttaact 14947244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 20614676 - 20614615
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  20614676 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 20614615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 221 - 330
Target Start/End: Original strand, 40680473 - 40680582
Alignment:
Q  221 atgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacctatt 319  Q
    ||||||||||| || ||||| ||||||||||||||| ||||||||||||||||        ||||| |||||||||||||||| || |  ||||||| ||    
T  40680473 atgcgtttttgctcccttaactatttatttggtatcactttggtcccttaact-aaaaaaagattgtttgagtactttatcttcatcttcgttacctgtt 40680571  T
Q  320 ttggtcccttc 330  Q
    |||||||||||    
T  40680572 ttggtcccttc 40680582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 56271276 - 56271215
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  56271276 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 56271215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 1098056 - 1098112
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  1098056 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 1098112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 9091427 - 9091483
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  9091427 ttaaatgctcttttggtcccttaagtatttatttggaatcgctttggtcccttaact 9091483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 17475400 - 17475456
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  17475400 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 17475456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 25618439 - 25618495
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  25618439 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 25618495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 209 - 273
Target Start/End: Original strand, 28504572 - 28504636
Alignment:
Q  209 aattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||| ||||||||  |||||||| ||||| |||||| |||||||||||||| ||||||||||    
T  28504572 aattaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttgatcccttaact 28504636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 31262279 - 31262223
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| |||||||||||| |||||| ||||||||||||||||||    
T  31262279 ttaaatgctcttttggtcccttaattatttaattggtaccgctttggtcccttaact 31262223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 31487981 - 31488037
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  31487981 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 31488037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 41610130 - 41610186
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  41610130 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 41610186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 227 - 399
Target Start/End: Complemental strand, 44183851 - 44183678
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacctattttggtc 325  Q
    |||||||| ||||| |||||||||||||| | |||||||||||||||        ||||| || |||||||||||||||| |||||||||| ||||||||    
T  44183851 ttttggtcccttaaatatttatttggtattgttttggtcccttaactaaaaaaaagattgtttaagtactttatctttatctctgttacctgttttggtc 44183752  T
Q  326 ccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctt 399  Q
    | ||| |||                 ||||||||||||||||||||||||| ||||||||| ||  ||||||||    
T  44183751 cattccgttaaaaaaattcaaaaaaatgttagggtttatattattcatcttcttccttctccttccatcatctt 44183678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 44304417 - 44304361
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  44304417 ttaaatgctcttttggtctcttaactatttaattggtatcgctttggtcccttaact 44304361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 53594987 - 53595043
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  ||||||||  |||| ||||||||||||||||||||||||||||||||    
T  53594987 ttaaatgccattttggtcctttaagtatttatttggtatcgctttggtcccttaact 53595043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 24045905 - 24045846
Alignment:
Q  214 ggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||||  ||||| || ||||| |||||| |||||||||||||||||||||||||    
T  24045905 ggtttaaatgctcttttgatcccttaactatttaattggtatcgctttggtcccttaact 24045846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 206 - 273
Target Start/End: Original strand, 41845493 - 41845560
Alignment:
Q  206 aaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| |||| ||||||||  |||||||| ||||| || ||| |||||||||||||||||||||||||    
T  41845493 aaaaaataggcttaaatgctcttttggtcccttaactaattaattggtatcgctttggtcccttaact 41845560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 14251560 - 14251510
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtccc 267  Q
    |||||||| ||||||||| ||||| ||||||||| ||||||||||||||||    
T  14251560 ttaaatgcatttttggtcccttaagtatttatttagtatcgctttggtccc 14251510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 24045362 - 24045424
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| ||||| |||||| ||||||||||||||||| |||||||    
T  24045362 ttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtctcttaact 24045424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 25619137 - 25619091
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  25619137 ttttggtctcttaactatttaattggtatcgctttggtcccttaact 25619091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 34543098 - 34543052
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  34543098 ttttggtcccttaagtatttaattggtatcgctttggtcccttaact 34543052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 39321052 - 39321114
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| ||||| |||||| ||||||||||||||||| |||||||    
T  39321052 ttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtctcttaact 39321114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 41845933 - 41845871
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| ||||| |||||| ||| |||||||||||||||||||||    
T  41845933 ttaggcttaaatgctcttttggtcccttaactatttaattgatatcgctttggtcccttaact 41845871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 44303528 - 44303574
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  44303528 ttttggtcccttaactatttaattggtatcgctttggtcccttaact 44303574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 48092020 - 48091974
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  48092020 ttttggtcccttaactatttaattggtatcgctttggtcccttaact 48091974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 5904508 - 5904561
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtccctta 270  Q
    |||||||| ||||||||| ||||| |||||| ||||||||| ||||||||||||    
T  5904508 ttaaatgcttttttggtcccttaactatttaattggtatcgttttggtccctta 5904561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 274
Target Start/End: Complemental strand, 5904943 - 5904886
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactg 274  Q
    ||||||||  ||||| || ||||| |||||| ||||||||||||||||||||||||||    
T  5904943 ttaaatgctcttttgatcccttaactatttaattggtatcgctttggtcccttaactg 5904886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 14251199 - 14251248
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcc 266  Q
    ||||||||  |||||||| ||||| |||||||||||||||||||||||||    
T  14251199 ttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcc 14251248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 17258864 - 17258925
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| ||||| |||||| ||||||| |||||||||||||||||    
T  17258864 taggcttaaatgctcttttggtcccttaactatttaattggtattgctttggtcccttaact 17258925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 24297214 - 24297156
Alignment:
Q  213 aggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||||||| ||||||||   ||| ||||||||||||||| ||||||||||||||||    
T  24297214 aggtttaaatgcgcttttggtcc--taagtatttatttggtatcactttggtcccttaact 24297156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 267
Target Start/End: Original strand, 44303982 - 44304035
Alignment:
Q  214 ggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtccc 267  Q
    |||||||||||  |||||||| ||||| ||||||||| ||||||||||||||||    
T  44303982 ggtttaaatgctcttttggtcccttaagtatttatttagtatcgctttggtccc 44304035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 1098451 - 1098395
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||  ||||| |||||| |||||||||||||||||||||||||    
T  1098451 ttaaatgctcttttggttccttaactatttaattggtatcgctttggtcccttaact 1098395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 3504024 - 3503968
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  ||||| || ||||| |||||| |||||||||||||||||||||||||    
T  3504024 ttaaatgctcttttgatcccttaactatttaattggtatcgctttggtcccttaact 3503968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 392 - 428
Target Start/End: Original strand, 13630270 - 13630306
Alignment:
Q  392 atcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||||| ||||||||||||||||||||||||||||    
T  13630270 atcatcttcttcatgatcttcatcatcaacaacacac 13630306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 14525992 - 14525936
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  ||||| || ||||| |||||| |||||||||||||||||||||||||    
T  14525992 ttaaatgctcttttgatcccttaactatttaattggtatcgctttggtcccttaact 14525936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 17259527 - 17259471
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| || ||||||||||||||||||||||    
T  17259527 ttaaatgctcttttggtctcttaactatttaatttgtatcgctttggtcccttaact 17259471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 22679636 - 22679692
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||||||||||||| |||||||||||    
T  22679636 ttaaatgctcttttggtcccttaactatttaattggtatcgctttagtcccttaact 22679692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 26673178 - 26673122
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||| |||||||||||||||||||||    
T  26673178 ttaaatgctcttttggtcccttaactatttaattgatatcgctttggtcccttaact 26673122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 28505128 - 28505072
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||| |||||||||||||||||||||    
T  28505128 ttaaatgctcttttggtcccttaactatttaattgatatcgctttggtcccttaact 28505072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 34238002 - 34237946
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||||||||| |||||||||||||||    
T  34238002 ttaaatgctattttggtcccttaactatttaattggtatcgttttggtcccttaact 34237946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 42018942 - 42018886
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  ||||| || |||||||||||| || ||||||||||||||||||||||    
T  42018942 ttaaatgctcttttgatcccttaattatttaattagtatcgctttggtcccttaact 42018886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 43292016 - 43291960
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||| ||||||||||||||||    
T  43292016 ttaaatgctcttttggtcccttaactatttaattggtatcactttggtcccttaact 43291960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 46307559 - 46307615
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||| ||||||||||    
T  46307559 ttaaatgctcttttggtcccttaactatttaattggtatcgctttgatcccttaact 46307615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 52574678 - 52574734
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||| | ||||||||| ||||| |||||| ||| |||||||||||||||||||||    
T  52574678 ttaaatacttttttggtctcttaactatttaattgatatcgctttggtcccttaact 52574734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 273
Target Start/End: Complemental strand, 22680168 - 22680101
Alignment:
Q  206 aaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||| |||||||   |||||||| ||||| || ||| |||||||| ||||||||||||||||    
T  22680168 aaaaattaggcttaaatgttattttggtcccttaagtagttaattggtatccctttggtcccttaact 22680101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 22813474 - 22813423
Alignment:
Q  218 taaatgcgtttttggtcacttaattatttatttggtatcgctttggtccctt 269  Q
    |||||||  |||||||| ||||| |||||| |||||||||||||||||||||    
T  22813474 taaatgctcttttggtcccttaagtatttagttggtatcgctttggtccctt 22813423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 273
Target Start/End: Original strand, 43969566 - 43969613
Alignment:
Q  226 tttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||| ||||||||||||| | |||| |||||||||||||||||    
T  43969566 tttttggtcccttaattatttatgtagtattgctttggtcccttaact 43969613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 14947732 - 14947686
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| ||||||||||||||||| |||||||    
T  14947732 ttttggtcccttaagtatttaattggtatcgctttggtctcttaact 14947686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 20614128 - 20614174
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| |||||||||||||||||| ||||||    
T  20614128 ttttggtcccttaactatttaattggtatcgctttggtcctttaact 20614174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 37208328 - 37208374
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| ||||||||| |||||||||||||||    
T  37208328 ttttggtcccttaactatttaattggtatcgttttggtcccttaact 37208374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 40256111 - 40256157
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| ||||||| |||||||||||||||||    
T  40256111 ttttggtcccttaagtatttaattggtattgctttggtcccttaact 40256157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 41610578 - 41610532
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| |||||||||||||| ||||||||||    
T  41610578 ttttggtcccttaactatttaattggtatcgctttgatcccttaact 41610532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 46308082 - 46308036
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| ||||||||| |||||||||||||||    
T  46308082 ttttggtcccttaactatttaattggtatcgttttggtcccttaact 46308036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 358 - 428
Target Start/End: Complemental strand, 51107939 - 51107869
Alignment:
Q  358 ggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    ||||| ||||||||||||| ||||||||| ||  ||| |||| |||| ||| |||||||||||||| ||||    
T  51107939 ggtttgtattattcatctttttccttctccttccatcctcttcttcacgattttcatcatcaacaatacac 51107869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 229 - 267
Target Start/End: Original strand, 51399231 - 51399269
Alignment:
Q  229 ttggtcacttaattatttatttggtatcgctttggtccc 267  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  51399231 ttggtcccttaaatatttatttggtatcgctttggtccc 51399269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 53595221 - 53595167
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||  |||||||| | ||| ||||||||||||||| ||||||||||||||    
T  53595221 ttaaatgctcttttggtcccgtaagtatttatttggtatcactttggtcccttaa 53595167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 56270557 - 56270603
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| |||||||||||||||||| ||||||    
T  56270557 ttttggtcccttaactatttaattggtatcgctttggtcctttaact 56270603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 330
Target Start/End: Complemental strand, 9087414 - 9087301
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacc 315  Q
    |||||||||||||||||| ||||| |||||||||| ||||  |||| ||||||||||        ||||  |||||||||||||||| || || |||| |    
T  9087414 ttaaatgcgtttttggtc-cttaactatttatttgatatcattttgttcccttaactaaaaaaaagattctttgagtactttatcttcatctccgttatc 9087316  T
Q  316 tattttggtcccttc 330  Q
    | |||||||||||||    
T  9087315 tgttttggtcccttc 9087301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 334
Target Start/End: Complemental strand, 13631854 - 13631736
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatcttta-ttctgttacc 315  Q
    |||||||||||||||||| ||||| |||||||||| |||| | ||||||| || |||        ||  | ||||||| |||||||||| ||| ||||||    
T  13631854 ttaaatgcgtttttggtcccttaagtatttatttgatatcaccttggtccttttactaaaaaaaagaccgtttgagtaatttatctttatttccgttacc 13631755  T
Q  316 tattttggtcccttctgtt 334  Q
    | ||||||||| |||||||    
T  13631754 tgttttggtcctttctgtt 13631736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 22813356 - 22813417
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||  ||||| |||||| |||||||| ||||||||||||||||    
T  22813356 taggcttaaatgctcttttggttccttaagtatttaattggtatcactttggtcccttaact 22813417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 511 - 564
Target Start/End: Original strand, 44182845 - 44182898
Alignment:
Q  511 attttcccattaaaaaacatccctttcaaacaaaacaacataatttcttaatct 564  Q
    ||||| ||||||||||||||||||||||| | |||||| | ||||||| |||||    
T  44182845 atttttccattaaaaaacatccctttcaatctaaacaatacaatttctcaatct 44182898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 44795755 - 44795808
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtccctta 270  Q
    ||||||||  |||||||| ||||| |||||| ||||||||| ||||||||||||    
T  44795755 ttaaatgctcttttggtcccttaagtatttaattggtatcgttttggtccctta 44795808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 48454065 - 48454004
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| ||||| |||||| ||| |||| ||||||||||||||||    
T  48454065 taggcttaaatgctcttttggtcccttaactatttaattgatatcactttggtcccttaact 48454004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 1369872 - 1369927
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||||||  ||||| |||||| || ||||||||||||||||||||||    
T  1369872 ttaaatgc-tttttggtttcttaaatatttaattagtatcgctttggtcccttaact 1369927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 2735422 - 2735466
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    |||| ||| ||||| ||||||||||||||| ||||||||||||||    
T  2735422 ttttcgtcccttaagtatttatttggtatcactttggtcccttaa 2735466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 3503473 - 3503529
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| | |||||||||||||||| ||||||    
T  3503473 ttaaatgctcttttggtcccttaactatttaatcggtatcgctttggtcctttaact 3503529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 42369150 - 42369186
Alignment:
Q  237 ttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| |||||| |||||||||||||||||||||||||    
T  42369150 ttaactatttaattggtatcgctttggtcccttaact 42369186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 273
Target Start/End: Complemental strand, 46849644 - 46849580
Alignment:
Q  209 aattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||| ||||||||  ||||| || ||||| |||||| |||| |||| |||||||||||||||    
T  46849644 aattaggcttaaatgctcttttgatcccttaaatatttaattggcatcgttttggtcccttaact 46849580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 396 - 428
Target Start/End: Complemental strand, 53596047 - 53596015
Alignment:
Q  396 tctttttcatgatcttcatcatcaacaacacac 428  Q
    |||| ||||||||||||||||||||||||||||    
T  53596047 tcttcttcatgatcttcatcatcaacaacacac 53596015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 1e-27; HSPs: 79)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 213 - 428
Target Start/End: Original strand, 8885657 - 8885873
Alignment:
Q  213 aggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgt 311  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||        ||||  ||||||| ||||| ||||| || ||    
T  8885657 aggtttaaatgcgtttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagattatttgagtattttatatttatctccgt 8885756  T
Q  312 tacctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatctt 411  Q
    ||||| ||||||||||||| |||                  |||||||||||||||||||||||| ||||||| | ||  ||| |||| |||||||||||    
T  8885757 tacctgttttggtcccttccgttaaataaatttaaaaacacgttagggtttatattattcatctttttccttcaccttccatcctcttcttcatgatctt 8885856  T
Q  412 catcatcaacaacacac 428  Q
    |||||||||||||||||    
T  8885857 catcatcaacaacacac 8885873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 217 - 428
Target Start/End: Complemental strand, 12602652 - 12602440
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacc 315  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||        ||||| ||||||| ||||| ||||| |||| ||||    
T  12602652 ttaaatgcgtttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtattttatatttatctctgctacc 12602553  T
Q  316 tattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatc 415  Q
    | ||||||||| ||| |||                  |||||||||||||||||||||||| ||||||||| ||| ||| |||| ||||||||||| |||    
T  12602552 tgttttggtcctttccgttaaataaattcaaaaaaacgttagggtttatattattcatcttcttccttctcctttcatcctcttcttcatgatctttatc 12602453  T
Q  416 atcaacaacacac 428  Q
    |||||||||||||    
T  12602452 atcaacaacacac 12602440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 508 - 659
Target Start/End: Original strand, 3093432 - 3093591
Alignment:
Q  508 ccaattttcccattaaaaaacatccctttcaaacaaaacaacataatttcttaatcttcctaaaccaaa---------atctttatatctaatcaccaca 598  Q
    |||||||| ||||||||||| ||||||||||| |||||||||| ||||| | ||||| |||||||||||         ||||||||||||||||||||||    
T  3093432 ccaatttttccattaaaaaatatccctttcaatcaaaacaacacaatttatcaatctccctaaaccaaatcaaccaaaatctttatatctaatcaccaca 3093531  T
Q  599 annnnnnnnaaaatccaaaactactctccaccaccacctgcacactactcacctttgcttc 659  Q
    |        ||| |||||||||||||||||||| ||||||| |||||||||||||||||||    
T  3093532 attttttttaaa-tccaaaactactctccaccatcacctgcgcactactcacctttgcttc 3093591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 217 - 428
Target Start/End: Original strand, 28189450 - 28189662
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacc 315  Q
    |||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||         |||| |||||||||||||||| || || ||||||    
T  28189450 ttaaatgcgtttttggtcccttaactatttatttggtatcactttggtcccttaactaaaaaaaatattgtttgagtactttatcttcatctccgttacc 28189549  T
Q  316 tattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatc 415  Q
    | ||||||||||||| |||                  |||||||||| ||||||||||||| ||||||||| ||  ||| |||| |||||||||||||||    
T  28189550 tgttttggtcccttccgttaaaaaaattcagaaaaacgttagggtttgtattattcatcttcttccttctctttccatcctcttcttcatgatcttcatc 28189649  T
Q  416 atcaacaacacac 428  Q
    |||||||||||||    
T  28189650 atcaacaacacac 28189662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 214 - 330
Target Start/End: Original strand, 16329745 - 16329862
Alignment:
Q  214 ggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgtt 312  Q
    |||||||||||  |||||||| ||||| ||||||||||||||||||||||||||||||||        ||||| ||||||||||||||||||| ||||||    
T  16329745 ggtttaaatgctcttttggtctcttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttatctttatctctgtt 16329844  T
Q  313 acctattttggtcccttc 330  Q
    | || |||||||||||||    
T  16329845 atctgttttggtcccttc 16329862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 217 - 428
Target Start/End: Complemental strand, 8030064 - 8029852
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacc 315  Q
    ||||||||||||||| |  ||||| ||||||||||||||| ||||||||||||||||        ||||| |||||||||||||||| || || ||||||    
T  8030064 ttaaatgcgtttttgatgccttaactatttatttggtatcactttggtcccttaactaaaaaaaagattgtttgagtactttatcttcatctccgttacc 8029965  T
Q  316 tattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatc 415  Q
    | ||||||||||||| |||                  |||||| ||| ||||||||||||| ||||||||| ||  |||||||| |||||||||||||||    
T  8029964 tgttttggtcccttccgttaaaaaaattcaaaaaaacgttaggttttgtattattcatcttcttccttctctttccatcatcttcttcatgatcttcatc 8029865  T
Q  416 atcaacaacacac 428  Q
    |||||||||||||    
T  8029864 atcaacaacacac 8029852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 351 - 428
Target Start/End: Complemental strand, 29519966 - 29519889
Alignment:
Q  351 ctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||||||||||||||||||||||| ||||||||| ||  ||||||||  |||||||||||||||||||||||||||    
T  29519966 ctgttagggtttatattattcatcttcttccttctctttccatcatcttcatcatgatcttcatcatcaacaacacac 29519889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 217 - 428
Target Start/End: Complemental strand, 8893116 - 8892904
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttattct-gttacc 315  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||        ||||  ||| ||| |||||||||||  | ||||||    
T  8893116 ttaaatgcgtttttggtcccttaagtatttatttggtattgctttggtcccttaactaaaataaagattatttgggtattttatctttatcttcgttacc 8893017  T
Q  316 tattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatc 415  Q
    |||||||||| |||| |||                  |||||||||||||||||||||||| ||||||||| ||  ||| |||| |||||||| ||||||    
T  8893016 tattttggtctcttccgttaaataaattcaaaaacacgttagggtttatattattcatcttcttccttctccttccatcctcttcttcatgattttcatc 8892917  T
Q  416 atcaacaacacac 428  Q
    |||||||||||||    
T  8892916 atcaacaacacac 8892904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 217 - 425
Target Start/End: Complemental strand, 16330894 - 16330684
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnn-gattgcttgagtactttatctttat-tctgttac 314  Q
    ||||||||  |||||| | ||||| ||||||||||||||||||||||||||||||||         ||||| ||||||| ||||||||||| || |||||    
T  16330894 ttaaatgctcttttggccccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaaagattgtttgagtattttatctttatctccgttac 16330795  T
Q  315 ctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcat 414  Q
    || |||||||||||||||||                  ||||| |||||||||||||||||| ||||||||| ||  ||| |||| ||||||||||||||    
T  16330794 ctgttttggtcccttctgttaaataaattcaaaaaaacgttagagtttatattattcatcttcttccttctccttccatcctcttcttcatgatcttcat 16330695  T
Q  415 catcaacaaca 425  Q
    |||||||||||    
T  16330694 catcaacaaca 16330684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 211 - 428
Target Start/End: Complemental strand, 40469158 - 40468940
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tct 309  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||| |         |||| |||||||||||||||| || |      
T  40469158 ttaggtttaaatgcgtttttggtcccttaactatttatttggtatcactttggtcccttaattaaaaaaaatattgtttgagtactttatcttcatcttc 40469059  T
Q  310 gttacctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatc 409  Q
    ||||||| ||||||||||||| |||                  |||||| ||| ||||||||||||| ||| ||||| ||  ||| |||| |||||||||    
T  40469058 gttacctgttttggtcccttccgttaaaaaaattcaaaaaaacgttaggctttgtattattcatcttcttcattctctttccatcctcttcttcatgatc 40468959  T
Q  410 ttcatcatcaacaacacac 428  Q
    |||||||||||||||||||    
T  40468958 ttcatcatcaacaacacac 40468940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 353 - 428
Target Start/End: Original strand, 12601377 - 12601452
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||||||||||||||||||||| ||| ||||| ||  ||| |||| ||||||||||||||||||||||||||||    
T  12601377 gttagggtttatattattcatcttcttcattctccttccatcctcttcttcatgatcttcatcatcaacaacacac 12601452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 353 - 428
Target Start/End: Complemental strand, 19298487 - 19298412
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    ||||| |||| ||||||||||||| ||||||||| ||  |||||||| ||||||||||||||||||||||||||||    
T  19298487 gttagagtttgtattattcatcttcttccttctctttcaatcatcttcttcatgatcttcatcatcaacaacacac 19298412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 234 - 427
Target Start/End: Original strand, 18950756 - 18950950
Alignment:
Q  234 cacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacctattttggtcccttctg 332  Q
    ||||||| ||||||||||||||||||||||||||||||||        ||||| ||||||||||||||||||| | |||||||| |||||||||||||||    
T  18950756 cacttaactatttatttggtatcgctttggtcccttaact-aaaaaaagattgtttgagtactttatctttatctatgttacctgttttggtcccttctg 18950854  T
Q  333 ttnnnnnnnnnnnnnnnn-ctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacaca 427  Q
    ||                 | |||||||||||||||||||||||| ||  || || ||  |||||||| ||||||||||| |||||||||||||||    
T  18950855 tttaaaaaaattcaaaaaaccgttagggtttatattattcatcttcttttttatccttccatcatcttcttcatgatctttatcatcaacaacaca 18950950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 3093188 - 3093244
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  3093188 ttaaatgcgtttttggtccattaactatttatttggtatcgctttggtcccttaact 3093244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 38573243 - 38573312
Alignment:
Q  141 aaaagactaactcatgccagcgttttttgaactaataaannnnnnnaaacataattgatcaacttaaaaa 210  Q
    ||||||||||||||||||| |||||||||||||||||||       ||||||||||||||||||||||||    
T  38573243 aaaagactaactcatgccaacgttttttgaactaataaatttttttaaacataattgatcaacttaaaaa 38573312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 353 - 428
Target Start/End: Original strand, 20685768 - 20685843
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||| ||| ||||||||||||| ||||||||| ||  ||| |||| ||||||||||||||||||||||||||||    
T  20685768 gttaggatttgtattattcatcttcttccttctctttccatcctcttcttcatgatcttcatcatcaacaacacac 20685843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 209 - 273
Target Start/End: Original strand, 9401115 - 9401179
Alignment:
Q  209 aattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  9401115 aattaggcttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaact 9401179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 10708152 - 10708208
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||| |||||||| ||||| ||||||||||||||| ||||||||||||||||    
T  10708152 ttaaatgcgcttttggtcccttaagtatttatttggtatcactttggtcccttaact 10708208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 33200580 - 33200524
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||||||| ||||| |||||| |||||||||||||||||||||||||    
T  33200580 ttaaatgcttttttggtcccttaactatttaattggtatcgctttggtcccttaact 33200524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 218 - 273
Target Start/End: Complemental strand, 2822735 - 2822680
Alignment:
Q  218 taaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||| ||||||||| ||||| |||||| |||||||||||||||||||||||||    
T  2822735 taaatgcttttttggtcccttaactatttaattggtatcgctttggtcccttaact 2822680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 210 - 273
Target Start/End: Complemental strand, 4602879 - 4602816
Alignment:
Q  210 attaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  4602879 attaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 4602816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 353 - 428
Target Start/End: Original strand, 10708266 - 10708341
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||||||| |||| |||||||| ||||||||| ||  ||| |||| |||||||||||||||||||| |||||||    
T  10708266 gttagggtttgtattgttcatcttcttccttctccttccatcctcttcttcatgatcttcatcatcaaaaacacac 10708341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 2822301 - 2822363
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| |||||||  ||||||||| ||||| |||||| |||||||||||||||||||||||||    
T  2822301 ttaggcttaaatgtttttttggtcccttaactatttaattggtatcgctttggtcccttaact 2822363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 207 - 273
Target Start/End: Complemental strand, 15136940 - 15136875
Alignment:
Q  207 aaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| |||| |||||||| ||||||||| ||||| |||||| |||||||||||||||||||||||||    
T  15136940 aaaactaggcttaaatgc-tttttggtcccttaactatttaattggtatcgctttggtcccttaact 15136875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 12601237 - 12601298
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||| |||||||| ||||| ||||||||||||||||||||||| | ||||||    
T  12601237 taggcttaaatgcgcttttggtcccttaaatatttatttggtatcgctttggttcattaact 12601298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 17978159 - 17978098
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||||||  ||||||||  |||| |||||| |||||||||||||||||||||||||    
T  17978159 taggtttaaatgctcttttggtccattaactatttaattggtatcgctttggtcccttaact 17978098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 220 - 273
Target Start/End: Complemental strand, 19299883 - 19299830
Alignment:
Q  220 aatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||| |||||||| ||||| ||||||||||||||| ||||||||||||||||    
T  19299883 aatgcgcttttggtcccttaactatttatttggtatcactttggtcccttaact 19299830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 32194889 - 32194828
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  32194889 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 32194828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 2970338 - 2970394
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||||||||| |||||| ||||||| |||||||||||||||||    
T  2970338 ttaaatgctcttttggtcacttaactatttaattggtattgctttggtcccttaact 2970394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 2970872 - 2970816
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  2970872 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 2970816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 5381539 - 5381595
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  5381539 ttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaact 5381595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 11129885 - 11129941
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| ||||||||||||||| ||||||||||||||||    
T  11129885 ttaaatgctcttttggtctcttaagtatttatttggtatcactttggtcccttaact 11129941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 218 - 334
Target Start/End: Complemental strand, 11131238 - 11131121
Alignment:
Q  218 taaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacct 316  Q
    |||||||  |||| ||| ||||| ||||||||||||||||||||||||||||||||        ||||| || |||| ||||| ||||| ||||||||||    
T  11131238 taaatgctcttttagtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttcagtaatttatatttatctctgttacct 11131139  T
Q  317 attttggtcccttctgtt 334  Q
     |||||||  ||||||||    
T  11131138 gttttggtttcttctgtt 11131121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 12966285 - 12966229
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  12966285 ttaaatgctcttttggtctcttaagtatttaattggtatcgctttggtcccttaact 12966229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 16712902 - 16712846
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  16712902 ttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaact 16712846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 26424885 - 26424825
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||    
T  26424885 ttaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaa 26424825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 353 - 417
Target Start/End: Original strand, 29519298 - 29519362
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcat 417  Q
    |||||||||||||||||| ||||| ||||||||| ||  |||||||| |||||||| ||||||||    
T  29519298 gttagggtttatattatttatcttcttccttctccttccatcatcttcttcatgatattcatcat 29519362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 32194445 - 32194501
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  32194445 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 32194501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 354 - 427
Target Start/End: Complemental strand, 10709281 - 10709211
Alignment:
Q  354 ttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacaca 427  Q
    ||||||||||||||||||||||| ||||||||| ||    |||| | |||||||||||||||||||| ||||||    
T  10709281 ttagggtttatattattcatcttcttccttctcctt---ccatcctcttcatgatcttcatcatcaaaaacaca 10709211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 25334664 - 25334610
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||    
T  25334664 ttaaatgctcttttggtctcttaactatttaattggtatcgctttggtcccttaa 25334610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 38978979 - 38978929
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtccc 267  Q
    |||||||| | ||||||| ||||| ||||||||||||||||||||||||||    
T  38978979 ttaaatgcttatttggtcccttaaatatttatttggtatcgctttggtccc 38978929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 18470130 - 18470069
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| ||||| |||||| ||| |||||||||||||||||||||    
T  18470130 taggcttaaatgctcttttggtcccttaactatttaattgatatcgctttggtcccttaact 18470069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 35668967 - 35668922
Alignment:
Q  228 tttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| |||| |||||| |||||||||||||||||||||||||    
T  35668967 tttggtcatttaagtatttagttggtatcgctttggtcccttaact 35668922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 4844051 - 4844107
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||| ||||||||    
T  4844051 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggttccttaact 4844107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 5484996 - 5484940
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||| ||||||||||||||||    
T  5484996 ttaaatgctcttttggtcccttaactatttaattggtatcactttggtcccttaact 5484940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 13479487 - 13479431
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  ||||||||  |||| |||||| |||||||||||||||||||||||||    
T  13479487 ttaaatgctcttttggtcctttaactatttaattggtatcgctttggtcccttaact 13479431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 213 - 273
Target Start/End: Original strand, 15136350 - 15136410
Alignment:
Q  213 aggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| |||||||  |||||||| ||||| |||||| |||||||||||||| ||||||||||    
T  15136350 aggtctaaatgctcttttggtcccttaactatttaattggtatcgctttgatcccttaact 15136410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 16712440 - 16712496
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  ||||||||  |||| |||||| |||||||||||||||||||||||||    
T  16712440 ttaaatgctcttttggtcctttaagtatttaattggtatcgctttggtcccttaact 16712496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 21533094 - 21533026
Alignment:
Q  205 taaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||| ||||||||||||  |||||||| ||||| |||||| ||||||| |||||| || |||||||    
T  21533094 taaaaataaggtttaaatgctcttttggtcccttaactatttaattggtattgctttgatctcttaact 21533026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 25882005 - 25882049
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||    
T  25882005 ttttggtctcttaactatttaattggtatcgctttggtcccttaa 25882049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 31557094 - 31557150
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||| ||| ||||| |||||| |||||||||||||||||||||||||    
T  31557094 ttaaatgctcttttagtcccttaactatttaattggtatcgctttggtcccttaact 31557150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 33200031 - 33200087
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  ||||||||  |||| |||||| |||||||||||||||||||||||||    
T  33200031 ttaaatgctattttggtcctttaactatttaattggtatcgctttggtcccttaact 33200087  T

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Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 34618577 - 34618521
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||| ||| ||||| |||||| |||||||||||||||||||||||||    
T  34618577 ttaaatgctcttttagtcccttaactatttaattggtatcgctttggtcccttaact 34618521  T

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Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 38536677 - 38536617
Alignment:
Q  213 aggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||| |  |||||||| ||||| |||||| ||||||||||||| |||||||||||    
T  38536677 aggtttaaatactcttttggtcccttaactatttaattggtatcgctttagtcccttaact 38536617  T

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Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 38807240 - 38807184
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  ||||||||  |||| |||||| |||||||||||||||||||||||||    
T  38807240 ttaaatgctcttttggtcctttaactatttaattggtatcgctttggtcccttaact 38807184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 39109546 - 39109502
Alignment:
Q  229 ttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||| ||||| |||||| |||||||||||||||||||||||||    
T  39109546 ttggtcccttaactatttaattggtatcgctttggtcccttaact 39109502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 43820383 - 43820327
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||  ||||| |||||| |||||||||||||||||||||||||    
T  43820383 ttaaatgctattttggttccttaactatttaattggtatcgctttggtcccttaact 43820327  T

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Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 273
Target Start/End: Complemental strand, 5382064 - 5382017
Alignment:
Q  226 tttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||| ||||| |||||| ||||||||| |||||||||||||||    
T  5382064 tttttggtctcttaactatttaattggtatcgttttggtcccttaact 5382017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 273
Target Start/End: Complemental strand, 31557600 - 31557553
Alignment:
Q  226 tttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||| ||||| |||||| ||||||||| |||||||||||||||    
T  31557600 tttttggtcccttaactatttaattggtatcgttttggtcccttaact 31557553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 271
Target Start/End: Complemental strand, 43183971 - 43183912
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    |||||| || ||| ||||||||| ||||||||||||  | ||||||||||||||||||||    
T  43183971 taggttaaattgcatttttggtcccttaattatttaggtagtatcgctttggtcccttaa 43183912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 11714042 - 11713996
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| ||| |||||||||||||||||||||    
T  11714042 ttttggtcccttaactatttaattgatatcgctttggtcccttaact 11713996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 211 - 273
Target Start/End: Original strand, 14287829 - 14287890
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||||||||  ||||||||  |||| |||||| ||| |||||||||||||||||||||    
T  14287829 ttaggtttaaatgctcttttggtct-ttaagtatttaattgatatcgctttggtcccttaact 14287890  T

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Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 15044752 - 15044798
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| |||||||||||||||||| ||||||    
T  15044752 ttttggtcccttaactatttaattggtatcgctttggtcctttaact 15044798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 16581649 - 16581599
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtccc 267  Q
    ||||||||  |||||||| ||||| ||||||||| ||||||||||||||||    
T  16581649 ttaaatgcacttttggtcccttaagtatttatttagtatcgctttggtccc 16581599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 271
Target Start/End: Original strand, 20685632 - 20685686
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||| |||||||| ||||| ||||||||||||||  ||||| ||||||||    
T  20685632 ttaaatgcgcttttggtctcttaactatttatttggtattactttgttcccttaa 20685686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 25478836 - 25478882
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||| | ||||| |||||| |||||||||||||||||||||||||    
T  25478836 ttttggccccttaactatttaattggtatcgctttggtcccttaact 25478882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 293 - 334
Target Start/End: Complemental strand, 29520025 - 29519983
Alignment:
Q  293 tactttatctttat-tctgttacctattttggtcccttctgtt 334  Q
    |||||||||||||| |||||||||| |||||||||||||||||    
T  29520025 tactttatctttatctctgttacctgttttggtcccttctgtt 29519983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 16203447 - 16203492
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttg 262  Q
    ||||||||  |||||||| ||||| |||||||||||||||||||||    
T  16203447 ttaaatgctcttttggtcccttaaatatttatttggtatcgctttg 16203492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 16581341 - 16581390
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcc 266  Q
    ||||||||  |||||||| ||||| ||||||||||| |||||||||||||    
T  16581341 ttaaatgctcttttggtcccttaagtatttatttgggatcgctttggtcc 16581390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 677387 - 677443
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||||||||||||||||  |||||||    
T  677387 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtttcttaact 677443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 8444955 - 8445011
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||| ||||||| ||||||||||||    
T  8444955 ttaaatgctcttttggtcccttaagtatttaattggcatcgcttcggtcccttaact 8445011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 227 - 267
Target Start/End: Complemental strand, 10373369 - 10373329
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtccc 267  Q
    |||||||| ||||| ||||||||| ||||||||||||||||    
T  10373369 ttttggtcccttaaatatttatttagtatcgctttggtccc 10373329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 14847769 - 14847825
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||| | ||||||||| ||||| |||||  |||||||||||||| ||||||||||    
T  14847769 ttaaatacttttttggtcccttaagtatttgattggtatcgctttgatcccttaact 14847825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 18064484 - 18064428
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  ||||| || ||||| |||||| |||||||||||||||||| ||||||    
T  18064484 ttaaatgctcttttgatcccttaagtatttaattggtatcgctttggtccattaact 18064428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 18469596 - 18469652
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||||||||| ||| |||||||||||    
T  18469596 ttaaatgctcttttggtcccttaactatttaattggtatcgttttagtcccttaact 18469652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 227 - 267
Target Start/End: Original strand, 25945839 - 25945879
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtccc 267  Q
    |||||||| ||||| |||||||| |||||||||||||||||    
T  25945839 ttttggtcccttaagtatttattcggtatcgctttggtccc 25945879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 38806846 - 38806902
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||||||||  |||||||||||||||    
T  38806846 ttaaatgctcttttggtcccttaactatttaattggtatcattttggtcccttaact 38806902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 39107816 - 39107760
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||||||||| ||| |||||||||||    
T  39107816 ttaaatgctcttttggtctcttaactatttaattggtatcgtttttgtcccttaact 39107760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 211 - 271
Target Start/End: Original strand, 44915737 - 44915797
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||| || ||| ||||| ||| ||||| |||||| || ||||||||||||||||||||    
T  44915737 ttaggttaaattgcatttttagtcccttaactatttaattagtatcgctttggtcccttaa 44915797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 2e-26; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 212 - 428
Target Start/End: Original strand, 8850215 - 8850433
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnn-gattgcttgagtactttatctttat-tct 309  Q
    |||||||||||||| |||||||| ||||| ||||||||| ||||| ||||||||||||||||         ||||| ||||||||||||| ||||| ||     
T  8850215 taggtttaaatgcgcttttggtcccttaactatttatttagtatcactttggtcccttaactaaaaaaaaagattgtttgagtactttatttttatctcc 8850314  T
Q  310 gttacctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatc 409  Q
    |||||||||||||||||||||| ||                | ||||| |||||||||||||||||| |||||| || ||  |||||||| |||||||||    
T  8850315 gttacctattttggtcccttctattaaaaaaatttaaaaaaccgttagagtttatattattcatcttcttccttatccttccatcatcttcttcatgatc 8850414  T
Q  410 ttcatcatcaacaacacac 428  Q
    |||||||||||||||||||    
T  8850415 ttcatcatcaacaacacac 8850433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 212 - 428
Target Start/End: Complemental strand, 12261550 - 12261333
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctg 310  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||        ||||| |||||||||||||||| || || |    
T  12261550 taggcttaaatgcgtttttggtcccttaactatttatttggtatcactttggtcccttaactaaaaaaaagattgtttgagtactttatcttcatctccg 12261451  T
Q  311 ttacctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatct 410  Q
    |||||| ||||||||||||| |||                  |||||| ||| ||||||||||||| ||||||||| ||  ||| |||| ||||||||||    
T  12261450 ttacctgttttggtcccttccgttaaaaaaattcaaaaaaacgttaggctttgtattattcatcttcttccttctctttccatcctcttcttcatgatct 12261351  T
Q  411 tcatcatcaacaacacac 428  Q
    ||||||||||||||||||    
T  12261350 tcatcatcaacaacacac 12261333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 217 - 428
Target Start/End: Original strand, 27128847 - 27129059
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacc 315  Q
    ||||||||| |||||||| ||||| ||||||||||||||| ||||||||||||||||        ||||| |||||||||||||||| || |||||||||    
T  27128847 ttaaatgcgcttttggtcccttaactatttatttggtatcactttggtcccttaactaaaaaaaagattgtttgagtactttatcttcatctctgttacc 27128946  T
Q  316 tattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatc 415  Q
    | ||||||||| ||| |||                  |||||||||| |||||||||| || ||||||||| ||  |||||||| |||||||||||||||    
T  27128947 tgttttggtccattccgttcaaaaaattcagaaaaacgttagggtttgtattattcatgttcttccttctctttccatcatcttcttcatgatcttcatc 27129046  T
Q  416 atcaacaacacac 428  Q
    |||||||||||||    
T  27129047 atcaacaacacac 27129059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 211 - 428
Target Start/End: Original strand, 28865596 - 28865813
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttattctg 310  Q
    ||||| ||||||||  ||||||||  |||| |||||||||||||||| ||||||| |||||||        ||||| ||||||||| |||||||||   |    
T  28865596 ttaggcttaaatgctattttggtcctttaaatatttatttggtatcgttttggtctcttaactaaaaaaaagattgtttgagtactatatctttatctcg 28865695  T
Q  311 ttacctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatct 410  Q
    |||||| |||||||||||| ||||                  |||||||||| ||||||||  ||| ||||||||| ||| |||||||| ||||||||||    
T  28865696 ttacctgttttggtcccttttgttaaaaaaatcaaaaaaaacgttagggtttgtattattccccttcttccttctcctttcatcatcttcttcatgatct 28865795  T
Q  411 tcatcatcaacaacacac 428  Q
    ||||||||||||||||||    
T  28865796 tcatcatcaacaacacac 28865813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 353 - 428
Target Start/End: Complemental strand, 902671 - 902596
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||||||||||| ||||||||| |||||| |  ||| |||||||| ||||||||||||||||||||||||||||    
T  902671 gttagggtttatatcattcatcttcttcctttttctttcatcatcttcttcatgatcttcatcatcaacaacacac 902596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 217 - 326
Target Start/End: Original strand, 901421 - 901530
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacc 315  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||         |||| || |||||||||||||||| || ||||||    
T  901421 ttaaatgcgtttttggtcctttaagtatttatttggtatcgctttggtcccttaact-aaaaaaaaattgtttaagtactttatctttatctccgttacc 901519  T
Q  316 tattttggtcc 326  Q
    |||||||||||    
T  901520 tattttggtcc 901530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 211 - 420
Target Start/End: Original strand, 10998721 - 10998931
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tct 309  Q
    ||||| |||||| || |||||||| ||||| |||||||||| ||||| |||||||| ||||||         |||| ||||||||||||| ||||| ||     
T  10998721 ttaggcttaaatacgcttttggtcccttaactatttatttgatatcgttttggtcctttaactaaaaaaaaaattgtttgagtactttatttttatctcc 10998820  T
Q  310 gttacctattttggtcccttctgttnnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatc 409  Q
    ||||||| |||||||| ||||||||                | |||||||||||| ||||||||||| ||||||||| ||  |||||||| |||||||||    
T  10998821 gttacctgttttggtctcttctgttaaaaaaattcaaaaaacggttagggtttatgttattcatcttcttccttctccttccatcatcttcttcatgatc 10998920  T
Q  410 ttcatcatcaa 420  Q
    |||||||||||    
T  10998921 ttcatcatcaa 10998931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 353 - 428
Target Start/End: Original strand, 901559 - 901634
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||||||||||| ||||||||| ||||||||  ||  |||||||| ||| ||||||||||||||||||||||||    
T  901559 gttagggtttatatcattcatcttcttccttcttcttccatcatcttcttcctgatcttcatcatcaacaacacac 901634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 353 - 428
Target Start/End: Complemental strand, 12587787 - 12587712
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||||||| || ||||| |||| ||||||||| ||| ||| |||| ||||||||||||||||||||||||||||    
T  12587787 gttagggtttgtactattcctcttcttccttctcctttcatcctcttcttcatgatcttcatcatcaacaacacac 12587712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 3366496 - 3366557
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| |||||||||||| |||||||||||||||||||||||||    
T  3366496 taggcttaaatgctattttggtctcttaattatttaattggtatcgctttggtcccttaact 3366557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 14527577 - 14527516
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  14527577 taggtttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 14527516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 209 - 273
Target Start/End: Complemental strand, 26392908 - 26392844
Alignment:
Q  209 aattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  26392908 aattaggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 26392844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 28866475 - 28866419
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| ||||||||||||||||||||||||||||||||    
T  28866475 ttaaatgctcttttggtctcttaaatatttatttggtatcgctttggtcccttaact 28866419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 353 - 428
Target Start/End: Original strand, 16146217 - 16146292
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||||||| ||||||||||||| |||||| |  ||| ||| |||| |||| |||||||||||||||||||||||    
T  16146217 gttagggtttgtattattcatcttcttccttattttttcatcctcttcttcaggatcttcatcatcaacaacacac 16146292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 228 - 334
Target Start/End: Complemental strand, 902797 - 902691
Alignment:
Q  228 tttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacctattttggtcc 326  Q
    |||||||  |||| ||||||||||||||||||||||||||||||||        ||||| || |||||||||||||||| || |||||||||||||||||    
T  902797 tttggtcttttaagtatttatttggtatcgctttggtcccttaact-aaaaaaagattgtttaagtactttatctttatctccgttacctattttggtcc 902699  T
Q  327 cttctgtt 334  Q
     ||| |||    
T  902698 tttccgtt 902691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 13839929 - 13839867
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  13839929 ttaggcttaaatgcacttttggtcccttaaatatttaattggtatcgctttggtcccttaact 13839867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 508 - 576
Target Start/End: Original strand, 901702 - 901770
Alignment:
Q  508 ccaattttcccattaaaaaacatccctttcaaacaaaacaacataatttcttaatcttcctaaaccaaa 576  Q
    |||||||| ||||||||||||||||||||||| | |||||||| ||||| | |||||  ||||||||||    
T  901702 ccaatttttccattaaaaaacatccctttcaatctaaacaacacaatttatcaatctctctaaaccaaa 901770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 3367053 - 3366997
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  ||||| || |||||||||||| |||||||||||||||||||||||||    
T  3367053 ttaaatgctcttttgctcccttaattatttaattggtatcgctttggtcccttaact 3366997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 3618784 - 3618840
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| ||| ||||| |||||| |||||||||||||||||||||||||    
T  3618784 ttaaatgcttttttagtcccttaactatttaattggtatcgctttggtcccttaact 3618840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 14673738 - 14673682
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||| | ||||||||| ||||| |||||| |||||||||||||||||||||||||    
T  14673738 ttaaattcttttttggtcccttaactatttaattggtatcgctttggtcccttaact 14673682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 17383738 - 17383794
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  17383738 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 17383794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 21271489 - 21271545
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  21271489 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 21271545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 21272174 - 21272118
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  21272174 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 21272118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 22498822 - 22498766
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  22498822 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 22498766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 31739970 - 31739914
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  31739970 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 31739914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 214 - 273
Target Start/End: Original strand, 10914560 - 10914619
Alignment:
Q  214 ggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||||   |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  10914560 ggtttaaatgttcttttggtctcttaaatatttaattggtatcgctttggtcccttaact 10914619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 17383988 - 17383934
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||    
T  17383988 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaa 17383934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 273
Target Start/End: Complemental strand, 29175584 - 29175522
Alignment:
Q  211 ttaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| ||||||||  |||||||| ||||| |||||| |||||||| ||||||||||||||||    
T  29175584 ttaggcttaaatgctcttttggtcccttaactatttaattggtatctctttggtcccttaact 29175522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 9424963 - 9424907
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||  ||||| |||||| |||||||||||||||||||||||||    
T  9424963 ttaaatgctcttttggtgccttaactatttaattggtatcgctttggtcccttaact 9424907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 13703384 - 13703440
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||||||||| |||||||||||||||    
T  13703384 ttaaatgctcttttggtcccttaactatttaattggtatcgttttggtcccttaact 13703440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 13839478 - 13839534
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||||||| |||||||||||||||||    
T  13839478 ttaaatgctcttttggtcccttaactatttaattggtattgctttggtcccttaact 13839534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 273
Target Start/End: Original strand, 22498376 - 22498443
Alignment:
Q  206 aaaaattaggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||| ||||||||   ||| ||| ||||| |||||| |||||||||||||||||| ||||||    
T  22498376 aaaaattaggcttaaatgctcattttgtcccttaactatttaattggtatcgctttggtcctttaact 22498443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 959372 - 959322
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtccc 267  Q
    ||||||||  |||||||| ||||| ||||||||||| ||||||||||||||    
T  959372 ttaaatgctcttttggtcccttaagtatttatttgggatcgctttggtccc 959322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 1948636 - 1948682
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| ||||||| |||||||||||||||||    
T  1948636 ttttggtctcttaactatttaattggtattgctttggtcccttaact 1948682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 12586907 - 12586853
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||  |||| ||| ||||| ||||||||||||||| ||||||||||||||    
T  12586907 ttaaatgctcttttcgtcccttaagtatttatttggtatcactttggtcccttaa 12586853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 12587913 - 12587852
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| |||||||| ||||||  | ||||| ||||||||| |||||||||||||| |||||||    
T  12587913 taggcttaaatgcttttttgcccccttaagtatttatttagtatcgctttggtctcttaact 12587852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 273
Target Start/End: Original strand, 18683572 - 18683609
Alignment:
Q  236 cttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  18683572 cttaactatttaattggtatcgctttggtcccttaact 18683609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 273
Target Start/End: Complemental strand, 18683972 - 18683935
Alignment:
Q  236 cttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  18683972 cttaactatttaattggtatcgctttggtcccttaact 18683935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 715103 - 715048
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||| ||||||||||    
T  715103 ttaaatgctcttttggtc-cttaactatttaattggtatcgctttgatcccttaact 715048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 29175067 - 29175123
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||| | ||||||||    
T  29175067 ttaaatgctcttttggtcccttaactatttaattggtatcgctttgattccttaact 29175123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 54; Significance: 1e-21; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 217 - 330
Target Start/End: Complemental strand, 14758 - 14646
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacc 315  Q
    |||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||        ||||| ||||||| ||||||||||| |||||||||    
T  14758 ttaaatgcgtttttggtcccttaagtatttatttgatatcgctttggtcccttaact--aaaaaagattgtttgagtattttatctttatctctgttacc 14661  T
Q  316 tattttggtcccttc 330  Q
    | |||||||||||||    
T  14660 tgttttggtcccttc 14646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 353 - 428
Target Start/End: Complemental strand, 14619 - 14544
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||||||||||||||||||| | || |||||| ||  ||| |||| ||||||||||||||||| || |||||||    
T  14619 gttagggtttatattattcatcctttttcttctccttccatcctcttcttcatgatcttcatcatgaataacacac 14544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 353 - 428
Target Start/End: Complemental strand, 22124 - 22049
Alignment:
Q  353 gttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||||||| ||||||||||||| ||||||||| ||  ||| |||| ||||||||||||||||||||||||||||    
T  22124 gttagggtttttattattcatcttcttccttctccttccatcctcttcttcatgatcttcatcatcaacaacacac 22049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 334
Target Start/End: Complemental strand, 22195 - 22142
Alignment:
Q  282 gattgcttgagtactttatctttat-tctgttacctattttggtcccttctgtt 334  Q
    ||||| ||||||||||||| ||||| |||||||||| ||||||||||||| |||    
T  22195 gattgtttgagtactttatttttatctctgttacctgttttggtcccttccgtt 22142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 236 - 429
Target Start/End: Original strand, 38904 - 39098
Alignment:
Q  236 cttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat-tctgttacctattttggtcccttctgtt 334  Q
    ||||| ||||||||||||||||||||||||||||||||        ||||| ||||||||||||||||||| || |||  || ||||||||| |||||||    
T  38904 cttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttatctttatctccgttgtctgttttggtccattctgtt 39003  T
Q  335 nnnnnnnnnnnnnnnnctgttagggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacaca 429  Q
                      |||||||||| || ||||| |||| ||||||||| ||| ||| |||| |||||||||||||||||||||||||||||    
T  39004 aaataaaatcaaaaaaacgttagggtttgtactattcctcttcttccttctcctttcatcctcttcttcatgatcttcatcatcaacaacacaca 39098  T

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Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 230875 - 230931
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||||||| ||||| |||||| |||||||||||||||||||||||||    
T  230875 ttaaatgcttttttggtcccttaactatttaattggtatcgctttggtcccttaact 230931  T

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Target: scaffold0014; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 231313 - 231257
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||||||||||||||| || ||||||    
T  231313 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggccctttaact 231257  T

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Target: scaffold0259 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 357 - 428
Target Start/End: Original strand, 12179 - 12250
Alignment:
Q  357 gggtttatattattcatcttattccttctcatttgatcatctttttcatgatcttcatcatcaacaacacac 428  Q
    |||||| || ||||| |||| ||||||||| ||| ||| |||| ||||||||||||||||||||||||||||    
T  12179 gggtttgtactattcctcttcttccttctcctttcatcctcttcttcatgatcttcatcatcaacaacacac 12250  T

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Target: scaffold0259; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 12064 - 12134
Alignment:
Q  236 cttaattatttatttggtatcgctttggtcccttaactgnnnnnnngattgcttgagtactttatctttat 306  Q
    ||||| ||||||||||||||||||||||||||||||||        ||||| |||||||||||||||||||    
T  12064 cttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttatctttat 12134  T

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Target: scaffold0006 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 83011 - 83072
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||||||   |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  83011 taggtttaaatgttattttggtcccttaactatttaattggtatcgctttggtcccttaact 83072  T

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Target: scaffold0006; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 83441 - 83385
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  83441 ttaaatgctattttggtcccttaactatttaattggtatcgctttggtcccttaact 83385  T

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Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 212 - 273
Target Start/End: Original strand, 1473 - 1534
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  1473 taggcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 1534  T

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Target: scaffold0002 (Bit Score: 37; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 283229 - 283173
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  283229 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 283173  T

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Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 428983 - 429027
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    |||||||| ||||| |  |||||||||||||||||||||||||||    
T  428983 ttttggtcccttaagttattatttggtatcgctttggtcccttaa 429027  T

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Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000006; HSPs: 4)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 214 - 273
Target Start/End: Complemental strand, 218221 - 218162
Alignment:
Q  214 ggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||||  |||||||| ||||| |||||| ||||||||| |||||||||||||||    
T  218221 ggtttaaatgctcttttggtcccttaagtatttaattggtatcgttttggtcccttaact 218162  T

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Target: scaffold0009; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 242221 - 242160
Alignment:
Q  212 taggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| ||||||||  |||||||| ||||| |||||| |||||||| ||||||||||||||||    
T  242221 taggcttaaatgctcttttggtcccttaactatttaattggtatcactttggtcccttaact 242160  T

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Target: scaffold0009; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 217597 - 217643
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| ||||||| |||||||||||||||||    
T  217597 ttttggtcccttaagtatttaattggtattgctttggtcccttaact 217643  T

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Target: scaffold0009; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 237 - 273
Target Start/End: Original strand, 241685 - 241721
Alignment:
Q  237 ttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||| |||||| |||||||||||||||||||||||||    
T  241685 ttaactatttaattggtatcgctttggtcccttaact 241721  T

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Target: scaffold0220 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 217 - 267
Target Start/End: Original strand, 25966 - 26016
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtccc 267  Q
    ||||||||  |||||||| ||||| ||||||||||||||||||||||||||    
T  25966 ttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtccc 26016  T

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Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 57035 - 57081
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  57035 ttttggtcccttaactatttaattggtatcgctttggtcccttaact 57081  T

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Target: scaffold0054; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 57603 - 57557
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||||    
T  57603 ttttggtcccttaactatttaattggtatcgctttggtcccttaact 57557  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 271
Target Start/End: Original strand, 300078 - 300136
Alignment:
Q  213 aggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaa 271  Q
    ||||||||||||  |||||||| ||||| |||||| |||||||||||||||||| ||||    
T  300078 aggtttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtcctttaa 300136  T

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Target: scaffold0482 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 217 - 273
Target Start/End: Complemental strand, 263 - 207
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||||| ||||| |||||||||||||||||||    
T  263 ttaaatgctcttttggtcccttaactatttaattggtctcgctttggtcccttaact 207  T

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Target: scaffold0027 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 124950 - 124996
Alignment:
Q  227 ttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||| ||||| |||||| ||| |||||||||||||||||||||    
T  124950 ttttggtcccttaactatttaattgatatcgctttggtcccttaact 124996  T

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Target: scaffold0533 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 3841 - 3897
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  ||||| || ||||| |||||| |||||| ||||||||||||||||||    
T  3841 ttaaatgctcttttgatcccttaagtatttaattggtaccgctttggtcccttaact 3897  T

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Target: scaffold0360 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 217 - 273
Target Start/End: Original strand, 12076 - 12132
Alignment:
Q  217 ttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    ||||||||  |||||||| ||||| |||| | |||| ||||||||||||||||||||    
T  12076 ttaaatgctcttttggtcccttaagtattgaattggcatcgctttggtcccttaact 12132  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 213 - 273
Target Start/End: Complemental strand, 133636 - 133576
Alignment:
Q  213 aggtttaaatgcgtttttggtcacttaattatttatttggtatcgctttggtcccttaact 273  Q
    |||||||||||   |||||||| ||||| |||||| |||||||||||||||| || |||||    
T  133636 aggtttaaatgttcttttggtcccttaagtatttaattggtatcgctttggttccataact 133576  T

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